Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066359.t1 | XP_003618072.2 | 88.8 | 456 | 23 | 2 | 1 | 428 | 137 | 592 | 4.60E-244 | 853.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066359.t1 | Q8VYZ0 | 67.3 | 455 | 116 | 6 | 1 | 427 | 150 | 599 | 1.1e-180 | 634.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066359.t1 | G7K0P6 | 88.8 | 456 | 23 | 2 | 1 | 428 | 137 | 592 | 3.3e-244 | 853.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene066359 | -0.870205 | 1.74E-66 | -1.69E-46 |
| MS.gene04921 | MS.gene066359 | 0.814224 | 1.72E-51 | -1.69E-46 |
| MS.gene049222 | MS.gene066359 | -0.815976 | 7.02E-52 | -1.69E-46 |
| MS.gene049232 | MS.gene066359 | -0.802078 | 6.66E-49 | -1.69E-46 |
| MS.gene049250 | MS.gene066359 | 0.804893 | 1.74E-49 | -1.69E-46 |
| MS.gene049251 | MS.gene066359 | 0.850034 | 2.20E-60 | -1.69E-46 |
| MS.gene049285 | MS.gene066359 | -0.829744 | 4.34E-55 | -1.69E-46 |
| MS.gene049320 | MS.gene066359 | -0.822514 | 2.27E-53 | -1.69E-46 |
| MS.gene049633 | MS.gene066359 | -0.858518 | 7.80E-63 | -1.69E-46 |
| MS.gene049865 | MS.gene066359 | -0.809453 | 1.88E-50 | -1.69E-46 |
| MS.gene05010 | MS.gene066359 | -0.81641 | 5.61E-52 | -1.69E-46 |
| MS.gene050170 | MS.gene066359 | -0.911801 | 4.03E-83 | -1.69E-46 |
| MS.gene050323 | MS.gene066359 | -0.866993 | 1.90E-65 | -1.69E-46 |
| MS.gene050338 | MS.gene066359 | 0.841499 | 4.58E-58 | -1.69E-46 |
| MS.gene050444 | MS.gene066359 | -0.81845 | 1.95E-52 | -1.69E-46 |
| MS.gene050496 | MS.gene066359 | -0.880319 | 6.05E-70 | -1.69E-46 |
| MS.gene050504 | MS.gene066359 | -0.844466 | 7.43E-59 | -1.69E-46 |
| MS.gene050518 | MS.gene066359 | -0.808394 | 3.16E-50 | -1.69E-46 |
| MS.gene050577 | MS.gene066359 | -0.86994 | 2.12E-66 | -1.69E-46 |
| MS.gene050612 | MS.gene066359 | -0.848538 | 5.75E-60 | -1.69E-46 |
| MS.gene050675 | MS.gene066359 | -0.825338 | 4.95E-54 | -1.69E-46 |
| MS.gene050697 | MS.gene066359 | -0.817695 | 2.89E-52 | -1.69E-46 |
| MS.gene050699 | MS.gene066359 | -0.837672 | 4.53E-57 | -1.69E-46 |
| MS.gene05080 | MS.gene066359 | -0.841137 | 5.70E-58 | -1.69E-46 |
| MS.gene05081 | MS.gene066359 | -0.828577 | 8.32E-55 | -1.69E-46 |
| MS.gene050868 | MS.gene066359 | -0.877934 | 4.22E-69 | -1.69E-46 |
| MS.gene050871 | MS.gene066359 | -0.874577 | 6.06E-68 | -1.69E-46 |
| MS.gene050875 | MS.gene066359 | 0.828581 | 8.30E-55 | -1.69E-46 |
| MS.gene050904 | MS.gene066359 | -0.865233 | 6.85E-65 | -1.69E-46 |
| MS.gene050986 | MS.gene066359 | -0.830146 | 3.46E-55 | -1.69E-46 |
| MS.gene051138 | MS.gene066359 | 0.822046 | 2.92E-53 | -1.69E-46 |
| MS.gene051268 | MS.gene066359 | -0.834349 | 3.16E-56 | -1.69E-46 |
| MS.gene051317 | MS.gene066359 | -0.852427 | 4.65E-61 | -1.69E-46 |
| MS.gene051439 | MS.gene066359 | 0.840667 | 7.57E-58 | -1.69E-46 |
| MS.gene051651 | MS.gene066359 | 0.844212 | 8.69E-59 | -1.69E-46 |
| MS.gene051838 | MS.gene066359 | -0.856516 | 3.05E-62 | -1.69E-46 |
| MS.gene051914 | MS.gene066359 | 0.812264 | 4.63E-51 | -1.69E-46 |
| MS.gene051941 | MS.gene066359 | -0.816801 | 4.59E-52 | -1.69E-46 |
| MS.gene052066 | MS.gene066359 | -0.800032 | 1.74E-48 | -1.69E-46 |
| MS.gene052100 | MS.gene066359 | -0.800201 | 1.61E-48 | -1.69E-46 |
| MS.gene052129 | MS.gene066359 | 0.844837 | 5.90E-59 | -1.69E-46 |
| MS.gene052164 | MS.gene066359 | -0.835259 | 1.86E-56 | -1.69E-46 |
| MS.gene052482 | MS.gene066359 | -0.834974 | 2.20E-56 | -1.69E-46 |
| MS.gene052486 | MS.gene066359 | -0.831119 | 2.00E-55 | -1.69E-46 |
| MS.gene052494 | MS.gene066359 | 0.818577 | 1.82E-52 | -1.69E-46 |
| MS.gene052503 | MS.gene066359 | -0.846692 | 1.85E-59 | -1.69E-46 |
| MS.gene052506 | MS.gene066359 | -0.817897 | 2.60E-52 | -1.69E-46 |
| MS.gene052822 | MS.gene066359 | -0.816455 | 5.48E-52 | -1.69E-46 |
| MS.gene052823 | MS.gene066359 | -0.85239 | 4.76E-61 | -1.69E-46 |
| MS.gene052825 | MS.gene066359 | -0.850217 | 1.96E-60 | -1.69E-46 |
| MS.gene052870 | MS.gene066359 | -0.801927 | 7.15E-49 | -1.69E-46 |
| MS.gene052872 | MS.gene066359 | -0.81928 | 1.26E-52 | -1.69E-46 |
| MS.gene052966 | MS.gene066359 | -0.826208 | 3.08E-54 | -1.69E-46 |
| MS.gene053097 | MS.gene066359 | 0.845548 | 3.79E-59 | -1.69E-46 |
| MS.gene053173 | MS.gene066359 | 0.834199 | 3.44E-56 | -1.69E-46 |
| MS.gene053203 | MS.gene066359 | -0.863511 | 2.36E-64 | -1.69E-46 |
| MS.gene053479 | MS.gene066359 | -0.856545 | 2.99E-62 | -1.69E-46 |
| MS.gene053480 | MS.gene066359 | -0.857667 | 1.40E-62 | -1.69E-46 |
| MS.gene053824 | MS.gene066359 | -0.857541 | 1.52E-62 | -1.69E-46 |
| MS.gene054343 | MS.gene066359 | -0.856299 | 3.53E-62 | -1.69E-46 |
| MS.gene054344 | MS.gene066359 | -0.888287 | 6.75E-73 | -1.69E-46 |
| MS.gene054551 | MS.gene066359 | 0.817558 | 3.10E-52 | -1.69E-46 |
| MS.gene054593 | MS.gene066359 | 0.812905 | 3.35E-51 | -1.69E-46 |
| MS.gene054595 | MS.gene066359 | -0.81003 | 1.41E-50 | -1.69E-46 |
| MS.gene054600 | MS.gene066359 | -0.802403 | 5.70E-49 | -1.69E-46 |
| MS.gene054633 | MS.gene066359 | 0.851608 | 7.95E-61 | -1.69E-46 |
| MS.gene054662 | MS.gene066359 | 0.806292 | 8.83E-50 | -1.69E-46 |
| MS.gene054706 | MS.gene066359 | 0.83431 | 3.23E-56 | -1.69E-46 |
| MS.gene05470 | MS.gene066359 | -0.895836 | 6.56E-76 | -1.69E-46 |
| MS.gene054851 | MS.gene066359 | 0.836563 | 8.70E-57 | -1.69E-46 |
| MS.gene054884 | MS.gene066359 | 0.837245 | 5.82E-57 | -1.69E-46 |
| MS.gene054954 | MS.gene066359 | -0.84788 | 8.74E-60 | -1.69E-46 |
| MS.gene055134 | MS.gene066359 | 0.809091 | 2.25E-50 | -1.69E-46 |
| MS.gene055224 | MS.gene066359 | -0.80036 | 1.50E-48 | -1.69E-46 |
| MS.gene055251 | MS.gene066359 | 0.863822 | 1.89E-64 | -1.69E-46 |
| MS.gene055362 | MS.gene066359 | -0.829089 | 6.26E-55 | -1.69E-46 |
| MS.gene055502 | MS.gene066359 | -0.845515 | 3.87E-59 | -1.69E-46 |
| MS.gene055577 | MS.gene066359 | -0.852868 | 3.48E-61 | -1.69E-46 |
| MS.gene055616 | MS.gene066359 | 0.807995 | 3.85E-50 | -1.69E-46 |
| MS.gene055719 | MS.gene066359 | 0.81763 | 2.98E-52 | -1.69E-46 |
| MS.gene055748 | MS.gene066359 | -0.865963 | 4.03E-65 | -1.69E-46 |
| MS.gene055750 | MS.gene066359 | -0.844625 | 6.73E-59 | -1.69E-46 |
| MS.gene055751 | MS.gene066359 | -0.872001 | 4.45E-67 | -1.69E-46 |
| MS.gene055776 | MS.gene066359 | -0.826055 | 3.35E-54 | -1.69E-46 |
| MS.gene05589 | MS.gene066359 | -0.912239 | 2.45E-83 | -1.69E-46 |
| MS.gene056198 | MS.gene066359 | 0.821038 | 4.99E-53 | -1.69E-46 |
| MS.gene056266 | MS.gene066359 | -0.873292 | 1.65E-67 | -1.69E-46 |
| MS.gene056387 | MS.gene066359 | -0.869508 | 2.94E-66 | -1.69E-46 |
| MS.gene056504 | MS.gene066359 | -0.885448 | 8.06E-72 | -1.69E-46 |
| MS.gene056510 | MS.gene066359 | -0.84813 | 7.46E-60 | -1.69E-46 |
| MS.gene056618 | MS.gene066359 | 0.812893 | 3.37E-51 | -1.69E-46 |
| MS.gene056657 | MS.gene066359 | -0.809622 | 1.73E-50 | -1.69E-46 |
| MS.gene056692 | MS.gene066359 | -0.820568 | 6.40E-53 | -1.69E-46 |
| MS.gene056694 | MS.gene066359 | 0.859527 | 3.89E-63 | -1.69E-46 |
| MS.gene056697 | MS.gene066359 | 0.849661 | 2.80E-60 | -1.69E-46 |
| MS.gene057332 | MS.gene066359 | -0.802347 | 5.86E-49 | -1.69E-46 |
| MS.gene057367 | MS.gene066359 | 0.836508 | 8.98E-57 | -1.69E-46 |
| MS.gene057658 | MS.gene066359 | -0.835921 | 1.27E-56 | -1.69E-46 |
| MS.gene057831 | MS.gene066359 | -0.822533 | 2.25E-53 | -1.69E-46 |
| MS.gene057857 | MS.gene066359 | -0.815806 | 7.66E-52 | -1.69E-46 |
| MS.gene05787 | MS.gene066359 | -0.807958 | 3.92E-50 | -1.69E-46 |
| MS.gene058157 | MS.gene066359 | -0.809514 | 1.82E-50 | -1.69E-46 |
| MS.gene058334 | MS.gene066359 | 0.877732 | 4.96E-69 | -1.69E-46 |
| MS.gene058338 | MS.gene066359 | -0.819009 | 1.45E-52 | -1.69E-46 |
| MS.gene05837 | MS.gene066359 | -0.840634 | 7.73E-58 | -1.69E-46 |
| MS.gene058382 | MS.gene066359 | 0.851856 | 6.76E-61 | -1.69E-46 |
| MS.gene058418 | MS.gene066359 | 0.801306 | 9.58E-49 | -1.69E-46 |
| MS.gene058419 | MS.gene066359 | -0.838446 | 2.86E-57 | -1.69E-46 |
| MS.gene058544 | MS.gene066359 | -0.838254 | 3.21E-57 | -1.69E-46 |
| MS.gene058773 | MS.gene066359 | -0.805765 | 1.14E-49 | -1.69E-46 |
| MS.gene058838 | MS.gene066359 | -0.860135 | 2.55E-63 | -1.69E-46 |
| MS.gene058853 | MS.gene066359 | 0.815506 | 8.93E-52 | -1.69E-46 |
| MS.gene059022 | MS.gene066359 | -0.835151 | 1.98E-56 | -1.69E-46 |
| MS.gene059023 | MS.gene066359 | -0.889735 | 1.86E-73 | -1.69E-46 |
| MS.gene059103 | MS.gene066359 | 0.814792 | 1.29E-51 | -1.69E-46 |
| MS.gene05914 | MS.gene066359 | -0.842999 | 1.83E-58 | -1.69E-46 |
| MS.gene05926 | MS.gene066359 | 0.854151 | 1.49E-61 | -1.69E-46 |
| MS.gene059304 | MS.gene066359 | 0.839777 | 1.29E-57 | -1.69E-46 |
| MS.gene059480 | MS.gene066359 | 0.815637 | 8.35E-52 | -1.69E-46 |
| MS.gene059553 | MS.gene066359 | 0.817502 | 3.19E-52 | -1.69E-46 |
| MS.gene05960 | MS.gene066359 | 0.804879 | 1.75E-49 | -1.69E-46 |
| MS.gene059667 | MS.gene066359 | -0.842217 | 2.96E-58 | -1.69E-46 |
| MS.gene059677 | MS.gene066359 | -0.838523 | 2.73E-57 | -1.69E-46 |
| MS.gene059699 | MS.gene066359 | 0.816925 | 4.30E-52 | -1.69E-46 |
| MS.gene059701 | MS.gene066359 | 0.809819 | 1.57E-50 | -1.69E-46 |
| MS.gene059703 | MS.gene066359 | 0.828979 | 6.65E-55 | -1.69E-46 |
| MS.gene059718 | MS.gene066359 | -0.811077 | 8.38E-51 | -1.69E-46 |
| MS.gene059756 | MS.gene066359 | -0.812839 | 3.46E-51 | -1.69E-46 |
| MS.gene059837 | MS.gene066359 | -0.843263 | 1.56E-58 | -1.69E-46 |
| MS.gene059865 | MS.gene066359 | -0.857839 | 1.24E-62 | -1.69E-46 |
| MS.gene05996 | MS.gene066359 | -0.800379 | 1.48E-48 | -1.69E-46 |
| MS.gene06000 | MS.gene066359 | -0.89278 | 1.16E-74 | -1.69E-46 |
| MS.gene06027 | MS.gene066359 | -0.852405 | 4.72E-61 | -1.69E-46 |
| MS.gene060593 | MS.gene066359 | 0.819011 | 1.45E-52 | -1.69E-46 |
| MS.gene060595 | MS.gene066359 | 0.81828 | 2.13E-52 | -1.69E-46 |
| MS.gene060703 | MS.gene066359 | -0.809915 | 1.49E-50 | -1.69E-46 |
| MS.gene060762 | MS.gene066359 | -0.85136 | 9.34E-61 | -1.69E-46 |
| MS.gene060778 | MS.gene066359 | -0.842205 | 2.98E-58 | -1.69E-46 |
| MS.gene06077 | MS.gene066359 | -0.851206 | 1.03E-60 | -1.69E-46 |
| MS.gene06093 | MS.gene066359 | 0.820177 | 7.87E-53 | -1.69E-46 |
| MS.gene060982 | MS.gene066359 | -0.884676 | 1.56E-71 | -1.69E-46 |
| MS.gene061044 | MS.gene066359 | 0.90384 | 2.29E-79 | -1.69E-46 |
| MS.gene061150 | MS.gene066359 | -0.803992 | 2.68E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene066359 | MS.gene015803 | PPI |
| MS.gene066359 | MS.gene017484 | PPI |
| MS.gene066359 | MS.gene049074 | PPI |
| MS.gene066359 | MS.gene87801 | PPI |
| MS.gene066359 | MS.gene05870 | PPI |
| MS.gene066359 | MS.gene066358 | PPI |
| MS.gene066359 | MS.gene034581 | PPI |
| MS.gene066359 | MS.gene38118 | PPI |
| MS.gene066359 | MS.gene39153 | PPI |
| MS.gene066359 | MS.gene020984 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066359.t1 | MTR_5g098680 | 89.615 | 520 | 26 | 2 | 1 | 492 | 137 | 656 | 0.0 | 917 |
| MS.gene066359.t1 | MTR_8g102580 | 82.150 | 521 | 60 | 3 | 1 | 492 | 130 | 646 | 0.0 | 855 |
| MS.gene066359.t1 | MTR_3g114910 | 69.716 | 317 | 90 | 1 | 1 | 317 | 81 | 391 | 1.50e-163 | 469 |
| MS.gene066359.t1 | MTR_6g053210 | 36.564 | 227 | 41 | 6 | 28 | 236 | 84 | 225 | 3.90e-27 | 111 |
| MS.gene066359.t1 | MTR_6g053210 | 60.000 | 55 | 22 | 0 | 437 | 491 | 233 | 287 | 8.31e-11 | 63.5 |
| MS.gene066359.t1 | MTR_6g061270 | 33.333 | 186 | 104 | 7 | 113 | 280 | 223 | 406 | 8.55e-17 | 84.0 |
| MS.gene066359.t1 | MTR_1g035420 | 36.000 | 150 | 85 | 3 | 113 | 251 | 217 | 366 | 7.33e-16 | 80.9 |
| MS.gene066359.t1 | MTR_6g061200 | 30.890 | 191 | 112 | 6 | 113 | 285 | 223 | 411 | 1.80e-15 | 79.7 |
| MS.gene066359.t1 | MTR_7g084090 | 33.155 | 187 | 104 | 7 | 113 | 280 | 285 | 469 | 2.60e-15 | 79.0 |
| MS.gene066359.t1 | MTR_7g084090 | 33.155 | 187 | 104 | 7 | 113 | 280 | 285 | 469 | 4.09e-15 | 78.6 |
| MS.gene066359.t1 | MTR_8g070070 | 35.948 | 153 | 84 | 4 | 113 | 251 | 325 | 477 | 1.67e-13 | 73.6 |
| MS.gene066359.t1 | MTR_1g035400 | 36.842 | 152 | 83 | 6 | 113 | 251 | 134 | 285 | 2.48e-13 | 72.8 |
| MS.gene066359.t1 | MTR_8g071030 | 33.987 | 153 | 87 | 4 | 113 | 251 | 305 | 457 | 1.38e-12 | 70.5 |
| MS.gene066359.t1 | MTR_8g070075 | 32.680 | 153 | 89 | 3 | 113 | 251 | 318 | 470 | 1.79e-12 | 70.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066359.t1 | AT1G57820 | 64.024 | 492 | 147 | 6 | 1 | 467 | 150 | 636 | 0.0 | 647 |
| MS.gene066359.t1 | AT1G57820 | 63.838 | 495 | 146 | 6 | 1 | 467 | 150 | 639 | 0.0 | 646 |
| MS.gene066359.t1 | AT1G57820 | 63.838 | 495 | 146 | 6 | 1 | 467 | 150 | 639 | 0.0 | 646 |
| MS.gene066359.t1 | AT5G39550 | 62.151 | 465 | 137 | 7 | 1 | 437 | 133 | 586 | 0.0 | 581 |
| MS.gene066359.t1 | AT1G66040 | 63.158 | 456 | 132 | 6 | 1 | 428 | 133 | 580 | 0.0 | 577 |
| MS.gene066359.t1 | AT1G66050 | 63.158 | 456 | 132 | 6 | 1 | 428 | 133 | 580 | 0.0 | 577 |
| MS.gene066359.t1 | AT1G57800 | 57.576 | 495 | 175 | 10 | 9 | 472 | 170 | 660 | 0.0 | 565 |
| MS.gene066359.t1 | AT1G57800 | 57.085 | 494 | 175 | 10 | 9 | 472 | 170 | 656 | 0.0 | 558 |
| MS.gene066359.t1 | AT4G08590 | 59.077 | 325 | 112 | 5 | 2 | 308 | 114 | 435 | 7.26e-136 | 400 |
| MS.gene066359.t1 | AT4G08590 | 59.259 | 324 | 112 | 5 | 2 | 308 | 114 | 434 | 1.39e-135 | 400 |
| MS.gene066359.t1 | AT4G08590 | 59.740 | 308 | 103 | 5 | 2 | 291 | 114 | 418 | 1.08e-129 | 383 |
| MS.gene066359.t1 | AT4G08590 | 59.559 | 272 | 89 | 5 | 2 | 255 | 114 | 382 | 2.13e-111 | 335 |
| MS.gene066359.t1 | AT4G08590 | 57.480 | 254 | 88 | 4 | 2 | 238 | 114 | 364 | 6.45e-99 | 303 |
| MS.gene066359.t1 | AT4G08590 | 57.480 | 254 | 88 | 4 | 2 | 238 | 114 | 364 | 6.45e-99 | 303 |
| MS.gene066359.t1 | AT2G22740 | 35.484 | 155 | 84 | 4 | 113 | 252 | 334 | 487 | 5.80e-14 | 75.1 |
| MS.gene066359.t1 | AT2G22740 | 35.484 | 155 | 84 | 4 | 113 | 252 | 334 | 487 | 5.80e-14 | 75.1 |
| MS.gene066359.t1 | AT5G13960 | 29.796 | 245 | 126 | 9 | 113 | 331 | 153 | 377 | 8.45e-14 | 74.3 |
| MS.gene066359.t1 | AT5G04940 | 36.250 | 160 | 83 | 6 | 113 | 257 | 215 | 370 | 9.74e-14 | 74.3 |
| MS.gene066359.t1 | AT5G04940 | 36.250 | 160 | 83 | 6 | 113 | 257 | 215 | 370 | 9.74e-14 | 74.3 |
| MS.gene066359.t1 | AT2G35160 | 28.929 | 280 | 151 | 10 | 28 | 284 | 259 | 513 | 1.01e-13 | 74.3 |
| MS.gene066359.t1 | AT5G13960 | 29.218 | 243 | 130 | 8 | 113 | 331 | 19 | 243 | 1.07e-13 | 73.6 |
| MS.gene066359.t1 | AT2G35160 | 28.929 | 280 | 151 | 10 | 28 | 284 | 295 | 549 | 1.09e-13 | 74.3 |
| MS.gene066359.t1 | AT2G35160 | 28.929 | 280 | 151 | 10 | 28 | 284 | 295 | 549 | 1.09e-13 | 74.3 |
| MS.gene066359.t1 | AT2G35160 | 28.929 | 280 | 151 | 10 | 28 | 284 | 295 | 549 | 1.09e-13 | 74.3 |
| MS.gene066359.t1 | AT2G35160 | 28.929 | 280 | 151 | 10 | 28 | 284 | 295 | 549 | 1.09e-13 | 74.3 |
Find 152 sgRNAs with CRISPR-Local
Find 284 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCCCATGTTGCTGGCATTGC+TGG | 0.208993 | 5.1:-79406354 | MS.gene066359:CDS |
| GCCAACTGTGCGTTGATTCT+TGG | 0.223531 | 5.1:+79406668 | None:intergenic |
| ACTATCCCAAAGGATCATTT+TGG | 0.243586 | 5.1:-79406477 | MS.gene066359:CDS |
| GAACAGATGGAGGAGAATTC+TGG | 0.311936 | 5.1:-79403965 | MS.gene066359:CDS |
| GGCTCAATCTGTCGCTCTCT+CGG | 0.312147 | 5.1:-79406316 | MS.gene066359:CDS |
| GGGTTCTTGTTGGTGATACT+TGG | 0.318104 | 5.1:-79406416 | MS.gene066359:CDS |
| AAGGACGGCTTTATAGCTTT+TGG | 0.324277 | 5.1:+79405084 | None:intergenic |
| AGAACCCCACGGTTCCTATT+AGG | 0.346266 | 5.1:+79406432 | None:intergenic |
| TTTCTGGCCAAAGCTATATC+AGG | 0.361815 | 5.1:-79404804 | MS.gene066359:CDS |
| ATCGGTCCAAAATGATCCTT+TGG | 0.370324 | 5.1:+79406471 | None:intergenic |
| TCGTATCTCACTCCTGCTTC+CGG | 0.373745 | 5.1:+79405908 | None:intergenic |
| TTGATCTGCAGTGATTTAAC+TGG | 0.374427 | 5.1:-79405554 | MS.gene066359:intron |
| GTCTACATTTCAGGAGGAAA+AGG | 0.376345 | 5.1:-79405199 | MS.gene066359:intron |
| CCCTGTTCCTGATATAGCTT+TGG | 0.380875 | 5.1:+79404797 | None:intergenic |
| GCCAAAGCTATATCAGGAAC+AGG | 0.381465 | 5.1:-79404798 | MS.gene066359:CDS |
| TTGCTGAGTATGATCCTAAT+AGG | 0.386285 | 5.1:-79406446 | MS.gene066359:CDS |
| GCTATCCTGTTCGTGTTGTT+AGG | 0.395823 | 5.1:-79406137 | MS.gene066359:intron |
| TCAGTGGTGTAGCATGTGTC+AGG | 0.405321 | 5.1:+79406552 | None:intergenic |
| TTCATCGGCTTCTTACTTTG+TGG | 0.409729 | 5.1:+79405150 | None:intergenic |
| TCCTGCTTCCGGTGCATAAG+AGG | 0.411847 | 5.1:+79405919 | None:intergenic |
| GAGACCTCGGTCTCTTCATC+CGG | 0.413934 | 5.1:+79403908 | None:intergenic |
| CTTGGATTAGTCGCCATCTT+CGG | 0.417258 | 5.1:+79406686 | None:intergenic |
| GCCATTTCTCAAAACACTTC+AGG | 0.422976 | 5.1:+79406756 | None:intergenic |
| CCTGTTGTTCAGCCTGTCGC+TGG | 0.422987 | 5.1:+79403990 | None:intergenic |
| TCGGCTTCTTACTTTGTGGT+GGG | 0.424543 | 5.1:+79405154 | None:intergenic |
| ACCTACTGTTAAGGAGTTCA+AGG | 0.426796 | 5.1:-79405513 | MS.gene066359:CDS |
| CACCCTCTGCCTAGCTAGCT+TGG | 0.428982 | 5.1:+79406628 | None:intergenic |
| ACAGGTTAACAGGGAAATGA+TGG | 0.429592 | 5.1:-79404029 | MS.gene066359:intron |
| CCAGCGACAGGCTGAACAAC+AGG | 0.433445 | 5.1:-79403990 | MS.gene066359:CDS |
| TAGGATGGAATGTAGGCAAT+GGG | 0.434316 | 5.1:-79406388 | MS.gene066359:CDS |
| CAAACTTCTGGTCAAATGAC+TGG | 0.435386 | 5.1:+79406199 | None:intergenic |
| CAACTTCTGCAAAGGCTGCT+TGG | 0.436051 | 5.1:-79404836 | MS.gene066359:CDS |
| CCTTTCTTCTTCTTCTGTGG+AGG | 0.445223 | 5.1:+79403827 | None:intergenic |
| TCACCTTTCTTCTTCTTCTG+TGG | 0.446054 | 5.1:+79403824 | None:intergenic |
| TCCTCTTATGCACCGGAAGC+AGG | 0.456225 | 5.1:-79405920 | MS.gene066359:CDS |
| ATCGGCTTCTTACTTTGTGG+TGG | 0.457795 | 5.1:+79405153 | None:intergenic |
| TGATACTTGGGAGGATAGGA+TGG | 0.459421 | 5.1:-79406403 | MS.gene066359:CDS |
| ATCAACCTTGTCCATGGAGC+TGG | 0.459843 | 5.1:+79405675 | None:intergenic |
| GGTTCTTGTTGGTGATACTT+GGG | 0.460044 | 5.1:-79406415 | MS.gene066359:CDS |
| TTGCGAACCAGTTGCCGAAA+AGG | 0.463278 | 5.1:-79406159 | MS.gene066359:CDS |
| GAGAAATGTTGGCGCAAAGT+TGG | 0.471436 | 5.1:-79405869 | MS.gene066359:CDS |
| ACTGAGAGAGCAAAGAAAAC+AGG | 0.475684 | 5.1:-79406534 | MS.gene066359:CDS |
| CTTACAGTAACAGGTCTCTC+AGG | 0.475890 | 5.1:+79407760 | None:intergenic |
| GGCTTCTTACTTTGTGGTGG+GGG | 0.477531 | 5.1:+79405156 | None:intergenic |
| TTCTGCAAAGGCTGCTTGGA+GGG | 0.479805 | 5.1:-79404832 | MS.gene066359:CDS |
| ACGAACCTAACAACACGAAC+AGG | 0.481034 | 5.1:+79406132 | None:intergenic |
| CTCAGCTATGTCAGTTGCAC+AGG | 0.481756 | 5.1:+79404720 | None:intergenic |
| GCTCAATCTGTCGCTCTCTC+GGG | 0.483213 | 5.1:-79406315 | MS.gene066359:CDS |
| CAATATCTGTCGCAAGGTGT+TGG | 0.483430 | 5.1:-79404887 | MS.gene066359:CDS |
| TCGCCCACTACCTACTGTTA+AGG | 0.485754 | 5.1:-79405522 | MS.gene066359:CDS |
| GACTGCAATTCCACCGAAGA+TGG | 0.491750 | 5.1:-79406699 | MS.gene066359:CDS |
| GATATAGCTTTGGCCAGAAA+AGG | 0.492720 | 5.1:+79404807 | None:intergenic |
| TATGTAGACGACGAGGATCA+TGG | 0.492748 | 5.1:-79406288 | MS.gene066359:CDS |
| AACTCCTTAACAGTAGGTAG+TGG | 0.497268 | 5.1:+79405518 | None:intergenic |
| TCTACATTTCAGGAGGAAAA+GGG | 0.498002 | 5.1:-79405198 | MS.gene066359:intron |
| AGGAAAAGGGCTGTTGGCTG+TGG | 0.498699 | 5.1:-79405185 | MS.gene066359:CDS |
| CTCAAAGTGGACGCAGTTTG+CGG | 0.499275 | 5.1:-79404771 | MS.gene066359:CDS |
| TGAGCACAAGGTGTAGTAAG+AGG | 0.501591 | 5.1:+79404859 | None:intergenic |
| GAAGTTTGAAAATATGAATG+AGG | 0.501935 | 5.1:-79406184 | MS.gene066359:CDS |
| CGTTGATATTACTGAAAGAA+AGG | 0.503780 | 5.1:-79405486 | MS.gene066359:CDS |
| GCCTAGCTAGCTTGGCCATA+CGG | 0.504984 | 5.1:+79406636 | None:intergenic |
| AAGAAGAAGAAAGGTGATGA+TGG | 0.507911 | 5.1:-79403818 | MS.gene066359:CDS |
| TTGGTGATACTTGGGAGGAT+AGG | 0.509145 | 5.1:-79406407 | MS.gene066359:CDS |
| AGAGGAACGTTTCTCCTTGT+GGG | 0.509810 | 5.1:+79405937 | None:intergenic |
| AGGAACCGTGGGGTTCTTGT+TGG | 0.510062 | 5.1:-79406426 | MS.gene066359:CDS |
| ATTGCTGGTCAGAGTACCTA+CGG | 0.510813 | 5.1:-79406339 | MS.gene066359:CDS |
| ACCAGCAATGCCAGCAACAT+GGG | 0.512898 | 5.1:+79406353 | None:intergenic |
| AGAAGAAAGGTGATGATGGC+AGG | 0.514121 | 5.1:-79403814 | MS.gene066359:CDS |
| ATGTAGACGACGAGGATCAT+GGG | 0.519044 | 5.1:-79406287 | MS.gene066359:CDS |
| CTTCTGCAAAGGCTGCTTGG+AGG | 0.520625 | 5.1:-79404833 | MS.gene066359:CDS |
| AAAGCCGTCCTTCAAAATCA+AGG | 0.522404 | 5.1:-79405073 | MS.gene066359:CDS |
| AACGAACTTGCTCAAACTGC+AGG | 0.523430 | 5.1:-79406721 | MS.gene066359:CDS |
| AAAGAAAGGATGATCCATCA+TGG | 0.523766 | 5.1:-79405472 | MS.gene066359:CDS |
| GGAAAGGCTAATGCTTGCAG+TGG | 0.524369 | 5.1:-79406513 | MS.gene066359:CDS |
| TTCAGGAGGAAAAGGGCTGT+TGG | 0.527911 | 5.1:-79405191 | MS.gene066359:intron |
| TATACAGAATTGAGAAATGT+TGG | 0.531104 | 5.1:-79405880 | MS.gene066359:CDS |
| TTGCTGGTCAGAGTACCTAC+GGG | 0.532070 | 5.1:-79406338 | MS.gene066359:CDS |
| GATAGAATCACTCCAGCGAC+AGG | 0.535002 | 5.1:-79404002 | MS.gene066359:CDS |
| AAGAGGAACGTTTCTCCTTG+TGG | 0.535286 | 5.1:+79405936 | None:intergenic |
| CCTCCACAGAAGAAGAAGAA+AGG | 0.537509 | 5.1:-79403827 | MS.gene066359:CDS |
| CGGCTTCTTACTTTGTGGTG+GGG | 0.538312 | 5.1:+79405155 | None:intergenic |
| TCGGTCCAAAATGATCCTTT+GGG | 0.540321 | 5.1:+79406472 | None:intergenic |
| GACCAGCAATGCCAGCAACA+TGG | 0.551617 | 5.1:+79406352 | None:intergenic |
| GATAGGGTCATAAGGTCTGC+AGG | 0.554621 | 5.1:-79405725 | MS.gene066359:intron |
| TTGCAGAAGTTGTGAGCACA+AGG | 0.559804 | 5.1:+79404847 | None:intergenic |
| GAGTGAAGAAAATGACAAGC+CGG | 0.561110 | 5.1:-79403927 | MS.gene066359:CDS |
| AGGCAGAAATTGTGCCCACA+TGG | 0.561703 | 5.1:+79406776 | None:intergenic |
| GAGCACAAGGTGTAGTAAGA+GGG | 0.563587 | 5.1:+79404860 | None:intergenic |
| TCTTGTTGGTGATACTTGGG+AGG | 0.566196 | 5.1:-79406412 | MS.gene066359:CDS |
| GGATTAGTCGCCATCTTCGG+TGG | 0.567166 | 5.1:+79406689 | None:intergenic |
| TTTGAGAAATGGCTTGGGCA+AGG | 0.567925 | 5.1:-79406746 | MS.gene066359:CDS |
| GCGGTGGAAGGGATCTCAGT+GGG | 0.568471 | 5.1:-79406242 | MS.gene066359:intron |
| TCCGTATGGCCAAGCTAGCT+AGG | 0.569125 | 5.1:-79406637 | MS.gene066359:CDS |
| CTTACATCAAAGTCCCATGA+TGG | 0.576030 | 5.1:+79405458 | None:intergenic |
| GGGAGGATAGGATGGAATGT+AGG | 0.579330 | 5.1:-79406395 | MS.gene066359:CDS |
| CTTTCTTTCAGTAATATCAA+CGG | 0.579868 | 5.1:+79405487 | None:intergenic |
| ATGATCCTAATAGGAACCGT+GGG | 0.580583 | 5.1:-79406437 | MS.gene066359:CDS |
| AAGCAGGAGTGAGATACGAT+GGG | 0.584452 | 5.1:-79405904 | MS.gene066359:CDS |
| TCTGCAGGTATTTGTTTGTG+AGG | 0.586985 | 5.1:-79405710 | MS.gene066359:CDS |
| CGTCCTTCAAAATCAAGGAT+AGG | 0.587442 | 5.1:-79405068 | MS.gene066359:CDS |
| GAAACGTTCCTCTTATGCAC+CGG | 0.590337 | 5.1:-79405927 | MS.gene066359:CDS |
| CAGTAGGTAGTGGGCGAGGA+CGG | 0.590658 | 5.1:+79405528 | None:intergenic |
| GTGACAATGAGCCAGCTCCA+TGG | 0.592691 | 5.1:-79405686 | MS.gene066359:CDS |
| ATGAGCCAGCTCCATGGACA+AGG | 0.595160 | 5.1:-79405680 | MS.gene066359:intron |
| ATCAAGGATAGGCTATTGAA+AGG | 0.595479 | 5.1:-79405057 | MS.gene066359:intron |
| TCCAAGAATCAACGCACAGT+TGG | 0.595787 | 5.1:-79406669 | MS.gene066359:CDS |
| ATAGGATGGAATGTAGGCAA+TGG | 0.595954 | 5.1:-79406389 | MS.gene066359:CDS |
| AAAGGATCCACAATGTTCAT+CGG | 0.596534 | 5.1:+79405135 | None:intergenic |
| AAGAAAGGATGATCCATCAT+GGG | 0.600210 | 5.1:-79405471 | MS.gene066359:CDS |
| AGCACAAGGTGTAGTAAGAG+GGG | 0.602277 | 5.1:+79404861 | None:intergenic |
| GAAGCAGGAGTGAGATACGA+TGG | 0.604687 | 5.1:-79405905 | MS.gene066359:CDS |
| TGGCCAAGCTAGCTAGGCAG+AGG | 0.605248 | 5.1:-79406631 | MS.gene066359:CDS |
| AGGAACAGGGCGACTCAAAG+TGG | 0.605619 | 5.1:-79404784 | MS.gene066359:CDS |
| CAGGTTAACAGGGAAATGAT+GGG | 0.608219 | 5.1:-79404028 | MS.gene066359:CDS |
| CAATCTGTCGCTCTCTCGGG+TGG | 0.608341 | 5.1:-79406312 | MS.gene066359:CDS |
| TGTGCTCACAACTTCTGCAA+AGG | 0.612302 | 5.1:-79404844 | MS.gene066359:CDS |
| TGAGTATCTTCAGAATCCAC+AGG | 0.613570 | 5.1:-79404701 | MS.gene066359:intron |
| TTGTTGGTTCAGACTCCATG+TGG | 0.613959 | 5.1:-79406791 | MS.gene066359:intron |
| CAGTGGTGTAGCATGTGTCA+GGG | 0.615057 | 5.1:+79406553 | None:intergenic |
| GGATCATACTCAGCAAGGAT+CGG | 0.615543 | 5.1:+79406453 | None:intergenic |
| TGGTTGCAATATCTGTCGCA+AGG | 0.615751 | 5.1:-79404893 | MS.gene066359:CDS |
| TAAGAAGCCGATGAACATTG+TGG | 0.621417 | 5.1:-79405142 | MS.gene066359:CDS |
| AGCGACAGATTGAGCCCCGT+AGG | 0.622050 | 5.1:+79406323 | None:intergenic |
| TGAACAACAGGAAGAACAGA+TGG | 0.623198 | 5.1:-79403978 | MS.gene066359:CDS |
| TATTAGGATCATACTCAGCA+AGG | 0.623524 | 5.1:+79406448 | None:intergenic |
| GAGAGCAAAGAAAACAGGAA+AGG | 0.626777 | 5.1:-79406529 | MS.gene066359:CDS |
| TTAACAGTAGGTAGTGGGCG+AGG | 0.626993 | 5.1:+79405524 | None:intergenic |
| GAAAGGCTAATGCTTGCAGT+GGG | 0.626997 | 5.1:-79406512 | MS.gene066359:CDS |
| TATGATCCTAATAGGAACCG+TGG | 0.637653 | 5.1:-79406438 | MS.gene066359:CDS |
| AATCTTCGTGACTATCCCAA+AGG | 0.640437 | 5.1:-79406487 | MS.gene066359:CDS |
| AAGGTGATGATGGCAGGCTG+TGG | 0.641524 | 5.1:-79403808 | MS.gene066359:CDS |
| TATTTGGTTCAGGTCCCACA+AGG | 0.642027 | 5.1:-79405951 | MS.gene066359:intron |
| CCCTTGAACTCCTTAACAGT+AGG | 0.642926 | 5.1:+79405512 | None:intergenic |
| CCAAAGCTATATCAGGAACA+GGG | 0.649568 | 5.1:-79404797 | MS.gene066359:CDS |
| GCTATGTCAGTTGCACAGGT+AGG | 0.652259 | 5.1:+79404724 | None:intergenic |
| GTTGGCGATTGCGATCCGTA+TGG | 0.654592 | 5.1:-79406651 | MS.gene066359:CDS |
| TGTAGACGACGAGGATCATG+GGG | 0.654974 | 5.1:-79406286 | MS.gene066359:CDS |
| ACTCCTTAACAGTAGGTAGT+GGG | 0.656580 | 5.1:+79405519 | None:intergenic |
| CCAGCAATGCCAGCAACATG+GGG | 0.663982 | 5.1:+79406354 | None:intergenic |
| ACAACAGGAAGAACAGATGG+AGG | 0.670527 | 5.1:-79403975 | MS.gene066359:CDS |
| TGTTGGTTCAGACTCCATGT+GGG | 0.679292 | 5.1:-79406790 | MS.gene066359:intron |
| GGCCAAGCTAGCTAGGCAGA+GGG | 0.683805 | 5.1:-79406630 | MS.gene066359:intron |
| AGGATGGAATGTAGGCAATG+GGG | 0.694397 | 5.1:-79406387 | MS.gene066359:CDS |
| CCTACTGTTAAGGAGTTCAA+GGG | 0.697230 | 5.1:-79405512 | MS.gene066359:CDS |
| AGCAGGAGTGAGATACGATG+GGG | 0.713889 | 5.1:-79405903 | MS.gene066359:CDS |
| CAAGCCGGATGAAGAGACCG+AGG | 0.726337 | 5.1:-79403912 | MS.gene066359:CDS |
| AGTCGTGGAGGAAATTAACG+AGG | 0.732114 | 5.1:-79403861 | MS.gene066359:CDS |
| AGCGGTGGAAGGGATCTCAG+TGG | 0.736744 | 5.1:-79406243 | MS.gene066359:intron |
| TATCACCAACAAGAACCCCA+CGG | 0.739370 | 5.1:+79406421 | None:intergenic |
| TGCTGGTCAGAGTACCTACG+GGG | 0.755559 | 5.1:-79406337 | MS.gene066359:CDS |
| TGATCCTAATAGGAACCGTG+GGG | 0.767429 | 5.1:-79406436 | MS.gene066359:CDS |
| GGGTGGTTATGTAGACGACG+AGG | 0.777978 | 5.1:-79406295 | MS.gene066359:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GTAAATTTAAAAAAACAAAA+AGG | + | chr5.1:79403863-79403882 | None:intergenic | 10.0% |
| !! | TTCAATTAAAATATAATCAT+TGG | + | chr5.1:79404373-79404392 | None:intergenic | 10.0% |
| !!! | ATATTTGTTTTAATCAATTA+TGG | - | chr5.1:79407042-79407061 | MS.gene066359:intron | 10.0% |
| !!! | CAATTATTAAGTTTAAATTT+TGG | - | chr5.1:79406268-79406287 | MS.gene066359:intron | 10.0% |
| !!! | AATCCATTTTAATTAGTAAA+GGG | + | chr5.1:79404278-79404297 | None:intergenic | 15.0% |
| !!! | TAATCCATTTTAATTAGTAA+AGG | + | chr5.1:79404279-79404298 | None:intergenic | 15.0% |
| !!! | TTAAAATATAATCATTGGTT+AGG | + | chr5.1:79404368-79404387 | None:intergenic | 15.0% |
| !! | ACAAAAAGGGTAAAAATTTA+AGG | + | chr5.1:79403849-79403868 | None:intergenic | 20.0% |
| !! | AGATTAGGAATACAATTAAA+AGG | + | chr5.1:79407107-79407126 | None:intergenic | 20.0% |
| !! | ATTGAAGTGTGTTAAATATT+TGG | - | chr5.1:79404387-79404406 | MS.gene066359:intron | 20.0% |
| !! | TAACAAAAACAAACTAAGTT+AGG | + | chr5.1:79404146-79404165 | None:intergenic | 20.0% |
| !! | TCCTTCAGTTAAAATTAAAT+TGG | + | chr5.1:79404584-79404603 | None:intergenic | 20.0% |
| !! | TTAATAATCATATTGATGTC+AGG | - | chr5.1:79407015-79407034 | MS.gene066359:intron | 20.0% |
| !!! | AACTTTTATTTTTCCTATCT+GGG | - | chr5.1:79405933-79405952 | MS.gene066359:CDS | 20.0% |
| !!! | ACCAATTTAATTTTAACTGA+AGG | - | chr5.1:79404580-79404599 | MS.gene066359:intron | 20.0% |
| !!! | AGAACAACTTGATAATTTTT+TGG | + | chr5.1:79404989-79405008 | None:intergenic | 20.0% |
| !!! | ATCCATTTTAATTAGTAAAG+GGG | + | chr5.1:79404277-79404296 | None:intergenic | 20.0% |
| !!! | CTTATTTATGATCTTTTAAC+AGG | - | chr5.1:79407527-79407546 | MS.gene066359:intron | 20.0% |
| !!! | TAACTTAGTTTGTTTTTGTT+AGG | - | chr5.1:79404145-79404164 | MS.gene066359:intron | 20.0% |
| !!! | TCAATATTTTAAGTACCTAA+AGG | + | chr5.1:79407285-79407304 | None:intergenic | 20.0% |
| !!! | TGAAAATGTTTGAAGTTTTT+TGG | - | chr5.1:79407350-79407369 | MS.gene066359:intron | 20.0% |
| !!! | TGATTAATTGATTCCTTATT+AGG | - | chr5.1:79405544-79405563 | MS.gene066359:CDS | 20.0% |
| !!! | TTGAACAATACAAACTTTTT+AGG | + | chr5.1:79404552-79404571 | None:intergenic | 20.0% |
| !!! | TTTTATTAGCCTAGTTTTTA+GGG | - | chr5.1:79406962-79406981 | MS.gene066359:intron | 20.0% |
| ! | AAAAAAAAGCTTACAGTAAC+AGG | + | chr5.1:79403826-79403845 | None:intergenic | 25.0% |
| ! | AATATATACAAGTGGAAGTA+TGG | - | chr5.1:79405972-79405991 | MS.gene066359:intron | 25.0% |
| ! | ACAATGAAACTAACCTAATA+AGG | + | chr5.1:79405560-79405579 | None:intergenic | 25.0% |
| ! | ACAGATCTAACAAACTAATA+AGG | + | chr5.1:79405503-79405522 | None:intergenic | 25.0% |
| ! | ACTGAAGTGTGTTAAATATT+TGG | - | chr5.1:79404019-79404038 | MS.gene066359:CDS | 25.0% |
| ! | AGAATTTCACATTCTCAAAA+AGG | + | chr5.1:79407175-79407194 | None:intergenic | 25.0% |
| ! | AGTGTTTACTATATTGTCTT+GGG | - | chr5.1:79407212-79407231 | MS.gene066359:intron | 25.0% |
| ! | CAACAAAAATTCAAATTGTC+AGG | - | chr5.1:79406467-79406486 | MS.gene066359:CDS | 25.0% |
| ! | CAATTAAAAGGAATTCAACA+AGG | + | chr5.1:79407095-79407114 | None:intergenic | 25.0% |
| ! | CTTTCTTTCAGTAATATCAA+CGG | + | chr5.1:79406090-79406109 | None:intergenic | 25.0% |
| ! | GAAGTTTGAAAATATGAATG+AGG | - | chr5.1:79405390-79405409 | MS.gene066359:intron | 25.0% |
| ! | GATAGGAAAAATAAAAGTTG+AGG | + | chr5.1:79405932-79405951 | None:intergenic | 25.0% |
| ! | GGAAAGTTTCATAGTAAATT+AGG | + | chr5.1:79407150-79407169 | None:intergenic | 25.0% |
| ! | TAGTGTTTACTATATTGTCT+TGG | - | chr5.1:79407211-79407230 | MS.gene066359:intron | 25.0% |
| ! | TATACAGAATTGAGAAATGT+TGG | - | chr5.1:79405694-79405713 | MS.gene066359:CDS | 25.0% |
| ! | TGAAGTTAATTGTTATCACA+AGG | + | chr5.1:79406551-79406570 | None:intergenic | 25.0% |
| ! | TGTTTATGGATCTGTTTATT+TGG | - | chr5.1:79405607-79405626 | MS.gene066359:intron | 25.0% |
| !! | ACTTCAAACATTTTCATACA+CGG | + | chr5.1:79407251-79407270 | None:intergenic | 25.0% |
| !! | CATTCATATTTTCAAACTTC+TGG | + | chr5.1:79405390-79405409 | None:intergenic | 25.0% |
| !! | CTGACAATTTGAATTTTTGT+TGG | + | chr5.1:79406469-79406488 | None:intergenic | 25.0% |
| !! | TGAATTTTTGTTGGATCAAA+AGG | + | chr5.1:79406460-79406479 | None:intergenic | 25.0% |
| !!! | AAACTTTTTAGGTCATCTAA+AGG | + | chr5.1:79404541-79404560 | None:intergenic | 25.0% |
| !!! | AAGTTTTTTGGCAAATCTTT+AGG | - | chr5.1:79407362-79407381 | MS.gene066359:intron | 25.0% |
| !!! | CAACTTTTATTTTTCCTATC+TGG | - | chr5.1:79405932-79405951 | MS.gene066359:CDS | 25.0% |
| !!! | GGGAATATTTTTTTGTGATA+GGG | - | chr5.1:79405833-79405852 | MS.gene066359:intron | 25.0% |
| !!! | GTTTTATTAGCCTAGTTTTT+AGG | - | chr5.1:79406961-79406980 | MS.gene066359:intron | 25.0% |
| !!! | TCCATTTTAATTAGTAAAGG+GGG | + | chr5.1:79404276-79404295 | None:intergenic | 25.0% |
| !!! | TGTTAATTTGTCTACATTTC+AGG | - | chr5.1:79406366-79406385 | MS.gene066359:CDS | 25.0% |
| !!! | TTAATTGTTTTTGCAGAGTT+TGG | - | chr5.1:79406661-79406680 | MS.gene066359:CDS | 25.0% |
| !!! | TTGGTATGCTATTTTGTTTA+TGG | - | chr5.1:79405593-79405612 | MS.gene066359:intron | 25.0% |
| AAAACACCTTCAAATAACAG+TGG | + | chr5.1:79406590-79406609 | None:intergenic | 30.0% | |
| AATGAAAAGAACTGTCTTGT+TGG | - | chr5.1:79406926-79406945 | MS.gene066359:intron | 30.0% | |
| ACTGAAGGATGTTAGATATT+TGG | - | chr5.1:79404595-79404614 | MS.gene066359:intron | 30.0% | |
| CATTGTGATATGTGATGAAT+TGG | - | chr5.1:79405574-79405593 | MS.gene066359:intron | 30.0% | |
| CGATTCAATCTCAAATTACA+AGG | + | chr5.1:79404114-79404133 | None:intergenic | 30.0% | |
| CGTTGATATTACTGAAAGAA+AGG | - | chr5.1:79406088-79406107 | MS.gene066359:intron | 30.0% | |
| CTGCAAAAACAATTAACCAA+AGG | + | chr5.1:79406657-79406676 | None:intergenic | 30.0% | |
| GTTGCACTAATATATACAAG+TGG | - | chr5.1:79405964-79405983 | MS.gene066359:intron | 30.0% | |
| TAACCAAAACAAACTCGATT+AGG | + | chr5.1:79403974-79403993 | None:intergenic | 30.0% | |
| TAGTCATTTCATAGCAGATT+AGG | + | chr5.1:79407122-79407141 | None:intergenic | 30.0% | |
| TCCCCCTTTACTAATTAAAA+TGG | - | chr5.1:79404272-79404291 | MS.gene066359:intron | 30.0% | |
| TGAACAATCGATAATCCATT+AGG | + | chr5.1:79405797-79405816 | None:intergenic | 30.0% | |
| TTATCTGAACGATTCAATCT+TGG | - | chr5.1:79403996-79404015 | MS.gene066359:CDS | 30.0% | |
| TTTCACATTCTCAAAAAGGT+TGG | + | chr5.1:79407171-79407190 | None:intergenic | 30.0% | |
| ! | AGTTTTGCTCTACATAAAAG+AGG | - | chr5.1:79407493-79407512 | MS.gene066359:intron | 30.0% |
| ! | ATAGGCTATTGAAAGGTATA+TGG | - | chr5.1:79406524-79406543 | MS.gene066359:CDS | 30.0% |
| ! | ATTGAAGCATCTTGAACATT+TGG | - | chr5.1:79404713-79404732 | MS.gene066359:CDS | 30.0% |
| ! | CTAACAATACAAACTTGTTC+AGG | + | chr5.1:79404689-79404708 | None:intergenic | 30.0% |
| ! | GATCTTTTAACAGGTTAACA+GGG | - | chr5.1:79407536-79407555 | MS.gene066359:intron | 30.0% |
| ! | GTTCAAGCTTTATCATTGAT+GGG | - | chr5.1:79405812-79405831 | MS.gene066359:intron | 30.0% |
| ! | TAATTTGTCTACATTTCAGG+AGG | - | chr5.1:79406369-79406388 | MS.gene066359:CDS | 30.0% |
| ! | TGATCTTTTAACAGGTTAAC+AGG | - | chr5.1:79407535-79407554 | MS.gene066359:intron | 30.0% |
| ! | TGTTAATTCAGTTTTGCCTT+TGG | - | chr5.1:79406638-79406657 | MS.gene066359:CDS | 30.0% |
| ! | TGTTCAAGCTTTATCATTGA+TGG | - | chr5.1:79405811-79405830 | MS.gene066359:intron | 30.0% |
| ! | TTCAAGCTTTATCATTGATG+GGG | - | chr5.1:79405813-79405832 | MS.gene066359:intron | 30.0% |
| !! | TTTGTTGTTGTTGTTGTTGT+TGG | - | chr5.1:79404767-79404786 | MS.gene066359:CDS | 30.0% |
| !! | TTTTGGGAAGATTATTTGCT+AGG | - | chr5.1:79406285-79406304 | MS.gene066359:CDS | 30.0% |
| !!! | AAGTTTTGTTGCAAACCTTT+AGG | - | chr5.1:79407267-79407286 | MS.gene066359:intron | 30.0% |
| !!! | GGGGAATATTTTTTTGTGAT+AGG | - | chr5.1:79405832-79405851 | MS.gene066359:intron | 30.0% |
| !!! | TAATCGAGTTTGTTTTGGTT+AGG | - | chr5.1:79403973-79403992 | MS.gene066359:CDS | 30.0% |
| !!! | TTTGTTTTTGTTAGGTTACC+TGG | - | chr5.1:79404153-79404172 | MS.gene066359:intron | 30.0% |
| !!! | TTTTTTGTGATAGGGTCATA+AGG | - | chr5.1:79405841-79405860 | MS.gene066359:intron | 30.0% |
| AAACTATGGTACAGCAAAGT+TGG | + | chr5.1:79406328-79406347 | None:intergenic | 35.0% | |
| AAAGAAAGGATGATCCATCA+TGG | - | chr5.1:79406102-79406121 | MS.gene066359:intron | 35.0% | |
| AAAGGATCCACAATGTTCAT+CGG | + | chr5.1:79406442-79406461 | None:intergenic | 35.0% | |
| AACTATGGTACAGCAAAGTT+GGG | + | chr5.1:79406327-79406346 | None:intergenic | 35.0% | |
| AAGAAAGGATGATCCATCAT+GGG | - | chr5.1:79406103-79406122 | MS.gene066359:intron | 35.0% | |
| AAGAAGAAGAAAGGTGATGA+TGG | - | chr5.1:79407756-79407775 | MS.gene066359:intron | 35.0% | |
| AAGTTAAGATTGAATCGTCC+AGG | + | chr5.1:79404174-79404193 | None:intergenic | 35.0% | |
| ACAAAAATCAACCTTGTCCA+TGG | + | chr5.1:79405908-79405927 | None:intergenic | 35.0% | |
| ATAACAGTGGTCTAAGGAAA+AGG | + | chr5.1:79406577-79406596 | None:intergenic | 35.0% | |
| ATCAAGGATAGGCTATTGAA+AGG | - | chr5.1:79406517-79406536 | MS.gene066359:CDS | 35.0% | |
| CAAACCAAACCCTAAAAACT+AGG | + | chr5.1:79406974-79406993 | None:intergenic | 35.0% | |
| CTTCAAATAACAGTGGTCTA+AGG | + | chr5.1:79406583-79406602 | None:intergenic | 35.0% | |
| GAGAGACCTTACAAAAACTA+TGG | + | chr5.1:79406342-79406361 | None:intergenic | 35.0% | |
| TATTAGGATCATACTCAGCA+AGG | + | chr5.1:79405129-79405148 | None:intergenic | 35.0% | |
| TCTACATTTCAGGAGGAAAA+GGG | - | chr5.1:79406376-79406395 | MS.gene066359:CDS | 35.0% | |
| TGAGAATGTGAAATTCTGTC+TGG | - | chr5.1:79407178-79407197 | MS.gene066359:intron | 35.0% | |
| TTGATCTGCAGTGATTTAAC+TGG | - | chr5.1:79406020-79406039 | MS.gene066359:intron | 35.0% | |
| TTGCTGAGTATGATCCTAAT+AGG | - | chr5.1:79405128-79405147 | MS.gene066359:CDS | 35.0% | |
| ! | ACTATCCCAAAGGATCATTT+TGG | - | chr5.1:79405097-79405116 | MS.gene066359:CDS | 35.0% |
| ! | CTTAGACCACTGTTATTTGA+AGG | - | chr5.1:79406581-79406600 | MS.gene066359:intron | 35.0% |
| ! | GCTGTACCATAGTTTTTGTA+AGG | - | chr5.1:79406333-79406352 | MS.gene066359:CDS | 35.0% |
| ! | TAGCCTATCCTTGATTTTGA+AGG | + | chr5.1:79406512-79406531 | None:intergenic | 35.0% |
| ! | TGGATCTGTTTATTTGGTTC+AGG | - | chr5.1:79405613-79405632 | MS.gene066359:intron | 35.0% |
| !! | CTATCCTTGATTTTGAAGGA+CGG | + | chr5.1:79406508-79406527 | None:intergenic | 35.0% |
| !! | GTCTTGTTGGACTTTTAGTT+GGG | - | chr5.1:79406939-79406958 | MS.gene066359:intron | 35.0% |
| !! | TGACCTAATCGAGTTTGTTT+TGG | - | chr5.1:79403968-79403987 | MS.gene066359:CDS | 35.0% |
| !! | TGTCTTGTTGGACTTTTAGT+TGG | - | chr5.1:79406938-79406957 | MS.gene066359:intron | 35.0% |
| !!! | AAGTGTTTTGAGAAATGGCT+TGG | - | chr5.1:79404822-79404841 | MS.gene066359:CDS | 35.0% |
| !!! | AGTGTTTTGAGAAATGGCTT+GGG | - | chr5.1:79404823-79404842 | MS.gene066359:CDS | 35.0% |
| !!! | TTAGCCTAGTTTTTAGGGTT+TGG | - | chr5.1:79406967-79406986 | MS.gene066359:intron | 35.0% |
| AAAGCCGTCCTTCAAAATCA+AGG | - | chr5.1:79406501-79406520 | MS.gene066359:CDS | 40.0% | |
| AACTCCTTAACAGTAGGTAG+TGG | + | chr5.1:79406059-79406078 | None:intergenic | 40.0% | |
| AATCTTCGTGACTATCCCAA+AGG | - | chr5.1:79405087-79405106 | MS.gene066359:CDS | 40.0% | |
| ACAGGTTAACAGGGAAATGA+TGG | - | chr5.1:79407545-79407564 | MS.gene066359:intron | 40.0% | |
| ACCTACTGTTAAGGAGTTCA+AGG | - | chr5.1:79406061-79406080 | MS.gene066359:intron | 40.0% | |
| ACTATGGTACAGCAAAGTTG+GGG | + | chr5.1:79406326-79406345 | None:intergenic | 40.0% | |
| ACTCCTTAACAGTAGGTAGT+GGG | + | chr5.1:79406058-79406077 | None:intergenic | 40.0% | |
| ACTGAGAGAGCAAAGAAAAC+AGG | - | chr5.1:79405040-79405059 | MS.gene066359:intron | 40.0% | |
| ATAGGATGGAATGTAGGCAA+TGG | - | chr5.1:79405185-79405204 | MS.gene066359:CDS | 40.0% | |
| ATCGGTCCAAAATGATCCTT+TGG | + | chr5.1:79405106-79405125 | None:intergenic | 40.0% | |
| ATGATCCTAATAGGAACCGT+GGG | - | chr5.1:79405137-79405156 | MS.gene066359:CDS | 40.0% | |
| CAAACTTCTGGTCAAATGAC+TGG | + | chr5.1:79405378-79405397 | None:intergenic | 40.0% | |
| CAGAAATGTAATACGCAGCA+CGG | + | chr5.1:79406200-79406219 | None:intergenic | 40.0% | |
| CAGGTTAACAGGGAAATGAT+GGG | - | chr5.1:79407546-79407565 | MS.gene066359:intron | 40.0% | |
| CCAAAGCTATATCAGGAACA+GGG | - | chr5.1:79406777-79406796 | MS.gene066359:CDS | 40.0% | |
| CCTACTGTTAAGGAGTTCAA+GGG | - | chr5.1:79406062-79406081 | MS.gene066359:intron | 40.0% | |
| CGTCCTTCAAAATCAAGGAT+AGG | - | chr5.1:79406506-79406525 | MS.gene066359:CDS | 40.0% | |
| CTTACATCAAAGTCCCATGA+TGG | + | chr5.1:79406119-79406138 | None:intergenic | 40.0% | |
| GAGAGCAAAGAAAACAGGAA+AGG | - | chr5.1:79405045-79405064 | MS.gene066359:intron | 40.0% | |
| GAGTGAAGAAAATGACAAGC+CGG | - | chr5.1:79407647-79407666 | MS.gene066359:intron | 40.0% | |
| GCCATTTCTCAAAACACTTC+AGG | + | chr5.1:79404821-79404840 | None:intergenic | 40.0% | |
| GTACATTGAGTGAGACCTAA+TGG | - | chr5.1:79405779-79405798 | MS.gene066359:intron | 40.0% | |
| GTCTACATTTCAGGAGGAAA+AGG | - | chr5.1:79406375-79406394 | MS.gene066359:CDS | 40.0% | |
| GTCTCACTCAATGTACTTAC+TGG | + | chr5.1:79405775-79405794 | None:intergenic | 40.0% | |
| TAAGAAGCCGATGAACATTG+TGG | - | chr5.1:79406432-79406451 | MS.gene066359:CDS | 40.0% | |
| TAGGATGGAATGTAGGCAAT+GGG | - | chr5.1:79405186-79405205 | MS.gene066359:CDS | 40.0% | |
| TATGATCCTAATAGGAACCG+TGG | - | chr5.1:79405136-79405155 | MS.gene066359:CDS | 40.0% | |
| TCACCTTTCTTCTTCTTCTG+TGG | + | chr5.1:79407753-79407772 | None:intergenic | 40.0% | |
| TCGGTCCAAAATGATCCTTT+GGG | + | chr5.1:79405105-79405124 | None:intergenic | 40.0% | |
| TCTGCAGGTATTTGTTTGTG+AGG | - | chr5.1:79405864-79405883 | MS.gene066359:CDS | 40.0% | |
| TGAACAACAGGAAGAACAGA+TGG | - | chr5.1:79407596-79407615 | MS.gene066359:intron | 40.0% | |
| TGAGTATCTTCAGAATCCAC+AGG | - | chr5.1:79406873-79406892 | MS.gene066359:intron | 40.0% | |
| TGATTCGAGTGAAAAAGTCG+TGG | - | chr5.1:79407698-79407717 | MS.gene066359:intron | 40.0% | |
| ! | TGTTTTCTTTGCTCTCTCAG+TGG | + | chr5.1:79405041-79405060 | None:intergenic | 40.0% |
| ! | TTTCTGGCCAAAGCTATATC+AGG | - | chr5.1:79406770-79406789 | MS.gene066359:CDS | 40.0% |
| ! | TTTTCCTATCTGGGTGTTTG+TGG | - | chr5.1:79405942-79405961 | MS.gene066359:CDS | 40.0% |
| !! | AAGGACGGCTTTATAGCTTT+TGG | + | chr5.1:79406493-79406512 | None:intergenic | 40.0% |
| !! | GATATAGCTTTGGCCAGAAA+AGG | + | chr5.1:79406770-79406789 | None:intergenic | 40.0% |
| !! | GGTTCTTGTTGGTGATACTT+GGG | - | chr5.1:79405159-79405178 | MS.gene066359:CDS | 40.0% |
| !! | TTCATCGGCTTCTTACTTTG+TGG | + | chr5.1:79406427-79406446 | None:intergenic | 40.0% |
| !!! | ATCAGAGGATTTTGAGACCT+CGG | + | chr5.1:79407682-79407701 | None:intergenic | 40.0% |
| !!! | GACTTTTTCACTCGAATCAG+AGG | + | chr5.1:79407697-79407716 | None:intergenic | 40.0% |
| !!! | GCCTGAAGTGTTTTGAGAAA+TGG | - | chr5.1:79404817-79404836 | MS.gene066359:CDS | 40.0% |
| AAGAGGAACGTTTCTCCTTG+TGG | + | chr5.1:79405641-79405660 | None:intergenic | 45.0% | |
| AAGCAGGAGTGAGATACGAT+GGG | - | chr5.1:79405670-79405689 | MS.gene066359:intron | 45.0% | |
| AATACGTGCAGTAGTACCTG+TGG | + | chr5.1:79406892-79406911 | None:intergenic | 45.0% | |
| AATGTAATACGCAGCACGGA+AGG | + | chr5.1:79406196-79406215 | None:intergenic | 45.0% | |
| ACAACAGGAAGAACAGATGG+AGG | - | chr5.1:79407599-79407618 | MS.gene066359:intron | 45.0% | |
| ACGAACCTAACAACACGAAC+AGG | + | chr5.1:79405445-79405464 | None:intergenic | 45.0% | |
| AGAGGAACGTTTCTCCTTGT+GGG | + | chr5.1:79405640-79405659 | None:intergenic | 45.0% | |
| AGCACAAGGTGTAGTAAGAG+GGG | + | chr5.1:79406716-79406735 | None:intergenic | 45.0% | |
| AGGATGGAATGTAGGCAATG+GGG | - | chr5.1:79405187-79405206 | MS.gene066359:CDS | 45.0% | |
| AGTCGTGGAGGAAATTAACG+AGG | - | chr5.1:79407713-79407732 | MS.gene066359:intron | 45.0% | |
| ATGTAGACGACGAGGATCAT+GGG | - | chr5.1:79405287-79405306 | MS.gene066359:intron | 45.0% | |
| CAATATCTGTCGCAAGGTGT+TGG | - | chr5.1:79406687-79406706 | MS.gene066359:CDS | 45.0% | |
| CCCTGTTCCTGATATAGCTT+TGG | + | chr5.1:79406780-79406799 | None:intergenic | 45.0% | |
| CCCTTGAACTCCTTAACAGT+AGG | + | chr5.1:79406065-79406084 | None:intergenic | 45.0% | |
| CCTCCACAGAAGAAGAAGAA+AGG | - | chr5.1:79407747-79407766 | MS.gene066359:intron | 45.0% | |
| CCTTTCTTCTTCTTCTGTGG+AGG | + | chr5.1:79407750-79407769 | None:intergenic | 45.0% | |
| CTTACAGTAACAGGTCTCTC+AGG | + | chr5.1:79403817-79403836 | None:intergenic | 45.0% | |
| GAAACGTTCCTCTTATGCAC+CGG | - | chr5.1:79405647-79405666 | MS.gene066359:intron | 45.0% | |
| GAAAGGCTAATGCTTGCAGT+GGG | - | chr5.1:79405062-79405081 | MS.gene066359:CDS | 45.0% | |
| GAACAGATGGAGGAGAATTC+TGG | - | chr5.1:79407609-79407628 | MS.gene066359:intron | 45.0% | |
| GAGAAATGTTGGCGCAAAGT+TGG | - | chr5.1:79405705-79405724 | MS.gene066359:CDS | 45.0% | |
| GAGCACAAGGTGTAGTAAGA+GGG | + | chr5.1:79406717-79406736 | None:intergenic | 45.0% | |
| GCCAAAGCTATATCAGGAAC+AGG | - | chr5.1:79406776-79406795 | MS.gene066359:CDS | 45.0% | |
| GGATCATACTCAGCAAGGAT+CGG | + | chr5.1:79405124-79405143 | None:intergenic | 45.0% | |
| TATCACCAACAAGAACCCCA+CGG | + | chr5.1:79405156-79405175 | None:intergenic | 45.0% | |
| TATGTAGACGACGAGGATCA+TGG | - | chr5.1:79405286-79405305 | MS.gene066359:intron | 45.0% | |
| TCCAAGAATCAACGCACAGT+TGG | - | chr5.1:79404905-79404924 | MS.gene066359:intron | 45.0% | |
| TCGGCTTCTTACTTTGTGGT+GGG | + | chr5.1:79406423-79406442 | None:intergenic | 45.0% | |
| TGAGCACAAGGTGTAGTAAG+AGG | + | chr5.1:79406718-79406737 | None:intergenic | 45.0% | |
| TGATACTTGGGAGGATAGGA+TGG | - | chr5.1:79405171-79405190 | MS.gene066359:CDS | 45.0% | |
| TGATCCTAATAGGAACCGTG+GGG | - | chr5.1:79405138-79405157 | MS.gene066359:CDS | 45.0% | |
| TGGTTGCAATATCTGTCGCA+AGG | - | chr5.1:79406681-79406700 | MS.gene066359:CDS | 45.0% | |
| TGTGCTCACAACTTCTGCAA+AGG | - | chr5.1:79406730-79406749 | MS.gene066359:CDS | 45.0% | |
| TTCGAGTGAAAAAGTCGTGG+AGG | - | chr5.1:79407701-79407720 | MS.gene066359:intron | 45.0% | |
| TTGCAGAAGTTGTGAGCACA+AGG | + | chr5.1:79406730-79406749 | None:intergenic | 45.0% | |
| ! | AACGAACTTGCTCAAACTGC+AGG | - | chr5.1:79404853-79404872 | MS.gene066359:CDS | 45.0% |
| ! | ATCGGCTTCTTACTTTGTGG+TGG | + | chr5.1:79406424-79406443 | None:intergenic | 45.0% |
| ! | ATTGCTGGTCAGAGTACCTA+CGG | - | chr5.1:79405235-79405254 | MS.gene066359:intron | 45.0% |
| ! | CACGAACAGGATAGCCTTTT+CGG | + | chr5.1:79405432-79405451 | None:intergenic | 45.0% |
| ! | GCTATCCTGTTCGTGTTGTT+AGG | - | chr5.1:79405437-79405456 | MS.gene066359:intron | 45.0% |
| ! | TATTTGGTTCAGGTCCCACA+AGG | - | chr5.1:79405623-79405642 | MS.gene066359:intron | 45.0% |
| ! | TTGGTGATACTTGGGAGGAT+AGG | - | chr5.1:79405167-79405186 | MS.gene066359:CDS | 45.0% |
| ! | TTTGAGAAATGGCTTGGGCA+AGG | - | chr5.1:79404828-79404847 | MS.gene066359:CDS | 45.0% |
| !! | AGAAGAAAGGTGATGATGGC+AGG | - | chr5.1:79407760-79407779 | MS.gene066359:intron | 45.0% |
| !! | CTTGGATTAGTCGCCATCTT+CGG | + | chr5.1:79404891-79404910 | None:intergenic | 45.0% |
| !! | GGGTTCTTGTTGGTGATACT+TGG | - | chr5.1:79405158-79405177 | MS.gene066359:CDS | 45.0% |
| !! | TCTTGTTGGTGATACTTGGG+AGG | - | chr5.1:79405162-79405181 | MS.gene066359:CDS | 45.0% |
| !! | TGTTGGTTCAGACTCCATGT+GGG | - | chr5.1:79404784-79404803 | MS.gene066359:CDS | 45.0% |
| !! | TTGTTGGTTCAGACTCCATG+TGG | - | chr5.1:79404783-79404802 | MS.gene066359:CDS | 45.0% |
| !! | TAAATTTAAAAAAACAAAAA+GGG | + | chr5.1:79403862-79403881 | None:intergenic | 5.0% |
| !!! | AATTATTAAGTTTAAATTTT+GGG | - | chr5.1:79406269-79406288 | MS.gene066359:intron | 5.0% |
| ACCAGCAATGCCAGCAACAT+GGG | + | chr5.1:79405224-79405243 | None:intergenic | 50.0% | |
| AGAACCCCACGGTTCCTATT+AGG | + | chr5.1:79405145-79405164 | None:intergenic | 50.0% | |
| AGCAGGAGTGAGATACGATG+GGG | - | chr5.1:79405671-79405690 | MS.gene066359:intron | 50.0% | |
| AGGCAGAAATTGTGCCCACA+TGG | + | chr5.1:79404801-79404820 | None:intergenic | 50.0% | |
| ATCAACCTTGTCCATGGAGC+TGG | + | chr5.1:79405902-79405921 | None:intergenic | 50.0% | |
| CAACTTCTGCAAAGGCTGCT+TGG | - | chr5.1:79406738-79406757 | MS.gene066359:CDS | 50.0% | |
| CAGTGGTGTAGCATGTGTCA+GGG | + | chr5.1:79405024-79405043 | None:intergenic | 50.0% | |
| CGGCTTCTTACTTTGTGGTG+GGG | + | chr5.1:79406422-79406441 | None:intergenic | 50.0% | |
| CTCAAAGTGGACGCAGTTTG+CGG | - | chr5.1:79406803-79406822 | MS.gene066359:intron | 50.0% | |
| CTCAGCTATGTCAGTTGCAC+AGG | + | chr5.1:79406857-79406876 | None:intergenic | 50.0% | |
| GAAGCAGGAGTGAGATACGA+TGG | - | chr5.1:79405669-79405688 | MS.gene066359:intron | 50.0% | |
| GACTGCAATTCCACCGAAGA+TGG | - | chr5.1:79404875-79404894 | MS.gene066359:CDS | 50.0% | |
| GATAGAATCACTCCAGCGAC+AGG | - | chr5.1:79407572-79407591 | MS.gene066359:intron | 50.0% | |
| GATAGGGTCATAAGGTCTGC+AGG | - | chr5.1:79405849-79405868 | MS.gene066359:intron | 50.0% | |
| GCAACCACAAACACCCAGAT+AGG | + | chr5.1:79405949-79405968 | None:intergenic | 50.0% | |
| GCTATGTCAGTTGCACAGGT+AGG | + | chr5.1:79406853-79406872 | None:intergenic | 50.0% | |
| GGAAAGGCTAATGCTTGCAG+TGG | - | chr5.1:79405061-79405080 | MS.gene066359:CDS | 50.0% | |
| GGCTTCTTACTTTGTGGTGG+GGG | + | chr5.1:79406421-79406440 | None:intergenic | 50.0% | |
| GGGAGGATAGGATGGAATGT+AGG | - | chr5.1:79405179-79405198 | MS.gene066359:CDS | 50.0% | |
| TCAGTGGTGTAGCATGTGTC+AGG | + | chr5.1:79405025-79405044 | None:intergenic | 50.0% | |
| TCGCCCACTACCTACTGTTA+AGG | - | chr5.1:79406052-79406071 | MS.gene066359:intron | 50.0% | |
| TCGTATCTCACTCCTGCTTC+CGG | + | chr5.1:79405669-79405688 | None:intergenic | 50.0% | |
| TGGTTCCTTTACACCGGAAG+CGG | - | chr5.1:79405313-79405332 | MS.gene066359:intron | 50.0% | |
| TGTAGACGACGAGGATCATG+GGG | - | chr5.1:79405288-79405307 | MS.gene066359:intron | 50.0% | |
| TTCAGGAGGAAAAGGGCTGT+TGG | - | chr5.1:79406383-79406402 | MS.gene066359:CDS | 50.0% | |
| TTCTGCAAAGGCTGCTTGGA+GGG | - | chr5.1:79406742-79406761 | MS.gene066359:CDS | 50.0% | |
| TTGCGAACCAGTTGCCGAAA+AGG | - | chr5.1:79405415-79405434 | MS.gene066359:intron | 50.0% | |
| ! | AGGATAGCCTTTTCGGCAAC+TGG | + | chr5.1:79405425-79405444 | None:intergenic | 50.0% |
| ! | GCTCATTTTCCCCATGTTGC+TGG | - | chr5.1:79405211-79405230 | MS.gene066359:intron | 50.0% |
| ! | TTGCTGGTCAGAGTACCTAC+GGG | - | chr5.1:79405236-79405255 | MS.gene066359:intron | 50.0% |
| !! | GCCAACTGTGCGTTGATTCT+TGG | + | chr5.1:79404909-79404928 | None:intergenic | 50.0% |
| !! | TTAACAGTAGGTAGTGGGCG+AGG | + | chr5.1:79406053-79406072 | None:intergenic | 50.0% |
| AGGAACAGGGCGACTCAAAG+TGG | - | chr5.1:79406790-79406809 | MS.gene066359:intron | 55.0% | |
| AGGAACCGTGGGGTTCTTGT+TGG | - | chr5.1:79405148-79405167 | MS.gene066359:CDS | 55.0% | |
| ATGAGCCAGCTCCATGGACA+AGG | - | chr5.1:79405894-79405913 | MS.gene066359:CDS | 55.0% | |
| CCAGCAATGCCAGCAACATG+GGG | + | chr5.1:79405223-79405242 | None:intergenic | 55.0% | |
| CTTCTGCAAAGGCTGCTTGG+AGG | - | chr5.1:79406741-79406760 | MS.gene066359:CDS | 55.0% | |
| GACCAGCAATGCCAGCAACA+TGG | + | chr5.1:79405225-79405244 | None:intergenic | 55.0% | |
| GAGACCTCGGTCTCTTCATC+CGG | + | chr5.1:79407669-79407688 | None:intergenic | 55.0% | |
| GCTCAATCTGTCGCTCTCTC+GGG | - | chr5.1:79405259-79405278 | MS.gene066359:intron | 55.0% | |
| GGCTCAATCTGTCGCTCTCT+CGG | - | chr5.1:79405258-79405277 | MS.gene066359:intron | 55.0% | |
| GGGGAGTGGTTCCTTTACAC+CGG | - | chr5.1:79405307-79405326 | MS.gene066359:intron | 55.0% | |
| GGGTGGTTATGTAGACGACG+AGG | - | chr5.1:79405279-79405298 | MS.gene066359:intron | 55.0% | |
| GTGACAATGAGCCAGCTCCA+TGG | - | chr5.1:79405888-79405907 | MS.gene066359:CDS | 55.0% | |
| GTTGGCGATTGCGATCCGTA+TGG | - | chr5.1:79404923-79404942 | MS.gene066359:intron | 55.0% | |
| TCCGTATGGCCAAGCTAGCT+AGG | - | chr5.1:79404937-79404956 | MS.gene066359:intron | 55.0% | |
| TCCTCTTATGCACCGGAAGC+AGG | - | chr5.1:79405654-79405673 | MS.gene066359:intron | 55.0% | |
| TCCTGCTTCCGGTGCATAAG+AGG | + | chr5.1:79405658-79405677 | None:intergenic | 55.0% | |
| TTACACCGGAAGCGGTGGAA+GGG | - | chr5.1:79405321-79405340 | MS.gene066359:intron | 55.0% | |
| TTCCACCGCTTCCGGTGTAA+AGG | + | chr5.1:79405321-79405340 | None:intergenic | 55.0% | |
| TTCCTTTACACCGGAAGCGG+TGG | - | chr5.1:79405316-79405335 | MS.gene066359:intron | 55.0% | |
| TTTACACCGGAAGCGGTGGA+AGG | - | chr5.1:79405320-79405339 | MS.gene066359:intron | 55.0% | |
| ! | AGGAAAAGGGCTGTTGGCTG+TGG | - | chr5.1:79406389-79406408 | MS.gene066359:CDS | 55.0% |
| ! | GCCTAGCTAGCTTGGCCATA+CGG | + | chr5.1:79404941-79404960 | None:intergenic | 55.0% |
| ! | TGCTGGTCAGAGTACCTACG+GGG | - | chr5.1:79405237-79405256 | MS.gene066359:intron | 55.0% |
| !! | AAGGTGATGATGGCAGGCTG+TGG | - | chr5.1:79407766-79407785 | MS.gene066359:CDS | 55.0% |
| !! | GGATTAGTCGCCATCTTCGG+TGG | + | chr5.1:79404888-79404907 | None:intergenic | 55.0% |
| !!! | TGCTTGGAGGGTGCCTTTTC+TGG | - | chr5.1:79406754-79406773 | MS.gene066359:CDS | 55.0% |
| ACGACGAGGATCATGGGGAG+TGG | - | chr5.1:79405293-79405312 | MS.gene066359:intron | 60.0% | |
| AGCGACAGATTGAGCCCCGT+AGG | + | chr5.1:79405254-79405273 | None:intergenic | 60.0% | |
| AGCGGTGGAAGGGATCTCAG+TGG | - | chr5.1:79405331-79405350 | MS.gene066359:intron | 60.0% | |
| CAAGCCGGATGAAGAGACCG+AGG | - | chr5.1:79407662-79407681 | MS.gene066359:intron | 60.0% | |
| CAATCTGTCGCTCTCTCGGG+TGG | - | chr5.1:79405262-79405281 | MS.gene066359:intron | 60.0% | |
| CACCCTCTGCCTAGCTAGCT+TGG | + | chr5.1:79404949-79404968 | None:intergenic | 60.0% | |
| CCAGCGACAGGCTGAACAAC+AGG | - | chr5.1:79407584-79407603 | MS.gene066359:intron | 60.0% | |
| CCCCATGTTGCTGGCATTGC+TGG | - | chr5.1:79405220-79405239 | MS.gene066359:intron | 60.0% | |
| CCTGTTGTTCAGCCTGTCGC+TGG | + | chr5.1:79407587-79407606 | None:intergenic | 60.0% | |
| GAGATCCCTTCCACCGCTTC+CGG | + | chr5.1:79405329-79405348 | None:intergenic | 60.0% | |
| GCGGTGGAAGGGATCTCAGT+GGG | - | chr5.1:79405332-79405351 | MS.gene066359:intron | 60.0% | |
| GGCCAAGCTAGCTAGGCAGA+GGG | - | chr5.1:79404944-79404963 | MS.gene066359:intron | 60.0% | |
| TGGCCAAGCTAGCTAGGCAG+AGG | - | chr5.1:79404943-79404962 | MS.gene066359:intron | 60.0% | |
| ! | GCTAGCTAGGCAGAGGGTGT+TGG | - | chr5.1:79404950-79404969 | MS.gene066359:intron | 60.0% |
| !! | AGCTAGGCAGAGGGTGTTGG+TGG | - | chr5.1:79404953-79404972 | MS.gene066359:intron | 60.0% |
| !! | CAGTAGGTAGTGGGCGAGGA+CGG | + | chr5.1:79406049-79406068 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.1 | gene | 79403805 | 79407791 | 79403805 | ID=MS.gene066359 |
| chr5.1 | mRNA | 79403805 | 79407791 | 79403805 | ID=MS.gene066359.t1;Parent=MS.gene066359 |
| chr5.1 | exon | 79407765 | 79407791 | 79407765 | ID=MS.gene066359.t1.exon1;Parent=MS.gene066359.t1 |
| chr5.1 | CDS | 79407765 | 79407791 | 79407765 | ID=cds.MS.gene066359.t1;Parent=MS.gene066359.t1 |
| chr5.1 | exon | 79406631 | 79406801 | 79406631 | ID=MS.gene066359.t1.exon2;Parent=MS.gene066359.t1 |
| chr5.1 | CDS | 79406631 | 79406801 | 79406631 | ID=cds.MS.gene066359.t1;Parent=MS.gene066359.t1 |
| chr5.1 | exon | 79406285 | 79406577 | 79406285 | ID=MS.gene066359.t1.exon3;Parent=MS.gene066359.t1 |
| chr5.1 | CDS | 79406285 | 79406577 | 79406285 | ID=cds.MS.gene066359.t1;Parent=MS.gene066359.t1 |
| chr5.1 | exon | 79406138 | 79406254 | 79406138 | ID=MS.gene066359.t1.exon4;Parent=MS.gene066359.t1 |
| chr5.1 | CDS | 79406138 | 79406254 | 79406138 | ID=cds.MS.gene066359.t1;Parent=MS.gene066359.t1 |
| chr5.1 | exon | 79405862 | 79405961 | 79405862 | ID=MS.gene066359.t1.exon5;Parent=MS.gene066359.t1 |
| chr5.1 | CDS | 79405862 | 79405961 | 79405862 | ID=cds.MS.gene066359.t1;Parent=MS.gene066359.t1 |
| chr5.1 | exon | 79405681 | 79405742 | 79405681 | ID=MS.gene066359.t1.exon6;Parent=MS.gene066359.t1 |
| chr5.1 | CDS | 79405681 | 79405742 | 79405681 | ID=cds.MS.gene066359.t1;Parent=MS.gene066359.t1 |
| chr5.1 | exon | 79405463 | 79405565 | 79405463 | ID=MS.gene066359.t1.exon7;Parent=MS.gene066359.t1 |
| chr5.1 | CDS | 79405463 | 79405565 | 79405463 | ID=cds.MS.gene066359.t1;Parent=MS.gene066359.t1 |
| chr5.1 | exon | 79405058 | 79405208 | 79405058 | ID=MS.gene066359.t1.exon8;Parent=MS.gene066359.t1 |
| chr5.1 | CDS | 79405058 | 79405208 | 79405058 | ID=cds.MS.gene066359.t1;Parent=MS.gene066359.t1 |
| chr5.1 | exon | 79404702 | 79404919 | 79404702 | ID=MS.gene066359.t1.exon9;Parent=MS.gene066359.t1 |
| chr5.1 | CDS | 79404702 | 79404919 | 79404702 | ID=cds.MS.gene066359.t1;Parent=MS.gene066359.t1 |
| chr5.1 | exon | 79403805 | 79404047 | 79403805 | ID=MS.gene066359.t1.exon10;Parent=MS.gene066359.t1 |
| chr5.1 | CDS | 79403805 | 79404047 | 79403805 | ID=cds.MS.gene066359.t1;Parent=MS.gene066359.t1 |
| Gene Sequence |
| Protein sequence |
