AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene021300

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene021300.t1 MTR_8g014260 67.974 459 114 7 1 434 1 451 0.0 583
MS.gene021300.t1 MTR_4g024710 84.173 278 42 2 158 434 71 347 6.29e-164 465
MS.gene021300.t1 MTR_4g024745 85.496 262 36 2 157 417 24 284 1.38e-149 426
MS.gene021300.t1 MTR_8g445780 57.598 408 135 6 1 388 1 390 9.17e-145 418
MS.gene021300.t1 MTR_8g077460 47.140 437 166 12 1 434 1 375 1.18e-109 328
MS.gene021300.t1 MTR_5g092960 43.129 473 213 16 1 433 5 461 1.04e-99 305
MS.gene021300.t1 MTR_8g014210 63.913 230 83 0 205 434 2 231 1.37e-94 284
MS.gene021300.t1 MTR_8g468810 41.474 475 225 16 1 434 1 463 4.83e-94 291
MS.gene021300.t1 MTR_8g062270 42.048 459 203 14 17 433 16 453 7.67e-92 285
MS.gene021300.t1 MTR_2g083840 42.174 460 221 16 7 434 11 457 1.02e-90 282
MS.gene021300.t1 MTR_8g058970 41.393 488 221 19 1 434 1 477 6.67e-89 278
MS.gene021300.t1 MTR_8g468840 41.342 462 224 15 1 431 2 447 9.49e-86 269
MS.gene021300.t1 MTR_8g014160 40.044 452 180 13 12 434 36 425 3.05e-85 267
MS.gene021300.t1 MTR_8g467800 40.042 472 221 15 5 434 2 453 4.13e-84 265
MS.gene021300.t1 MTR_4g032730 38.144 485 229 18 1 433 1 466 6.59e-78 249
MS.gene021300.t1 MTR_8g468760 39.121 455 200 16 14 433 6 418 2.08e-73 236
MS.gene021300.t1 MTR_4g024720 62.802 207 56 4 1 193 1 200 2.62e-73 229
MS.gene021300.t1 MTR_8g058965 38.248 468 232 15 11 434 2 456 1.38e-72 235
MS.gene021300.t1 MTR_8g469020 37.061 456 238 13 17 434 7 451 4.30e-72 234
MS.gene021300.t1 MTR_8g070950 39.525 463 222 19 1 434 1 434 2.31e-71 231
MS.gene021300.t1 MTR_8g468810 41.361 382 178 13 1 347 1 371 3.02e-68 221
MS.gene021300.t1 MTR_5g092960 41.470 381 175 13 1 347 5 371 3.80e-67 219
MS.gene021300.t1 MTR_8g062010 35.762 453 240 18 8 434 3 430 6.97e-66 217
MS.gene021300.t1 MTR_8g062310 37.360 447 208 18 17 434 25 428 4.02e-65 215
MS.gene021300.t1 MTR_8g062080 34.624 465 243 18 5 434 7 445 2.95e-62 208
MS.gene021300.t1 MTR_8g468810 40.118 339 160 10 1 310 1 325 1.96e-59 197
MS.gene021300.t1 MTR_8g468810 41.066 319 149 9 1 290 1 309 4.50e-59 196
MS.gene021300.t1 MTR_8g468810 41.066 319 149 9 1 290 1 309 9.95e-59 196
MS.gene021300.t1 MTR_4g050250 36.706 425 213 16 3 380 4 419 3.98e-54 186
MS.gene021300.t1 MTR_5g021550 55.952 168 58 6 5 165 4 162 1.40e-50 169
MS.gene021300.t1 MTR_8g062300 31.138 501 254 18 1 434 1 477 3.87e-46 166
MS.gene021300.t1 MTR_8g467800 40.308 325 144 12 5 296 2 309 8.47e-46 162
MS.gene021300.t1 MTR_8g014290 50.932 161 66 4 12 165 5 159 2.76e-39 139
MS.gene021300.t1 MTR_5g084070 30.837 454 247 17 6 427 2 420 2.33e-37 141
MS.gene021300.t1 MTR_4g024770 92.063 63 5 0 1 63 8 70 8.09e-35 124
MS.gene021300.t1 MTR_8g467790 31.078 399 207 18 17 389 148 504 1.62e-34 134
MS.gene021300.t1 MTR_2g086020 31.328 399 178 15 45 434 4 315 2.36e-34 130
MS.gene021300.t1 MTR_1g041245 27.356 435 240 15 17 434 11 386 8.88e-31 122
MS.gene021300.t1 MTR_5g008950 25.909 440 227 13 19 434 1 365 1.18e-29 119
MS.gene021300.t1 MTR_8g014230 63.291 79 29 0 346 424 17 95 8.78e-28 106
MS.gene021300.t1 MTR_5g080710 27.983 461 264 18 9 433 25 453 1.75e-27 114
MS.gene021300.t1 MTR_8g014220 35.211 213 61 6 1 190 1 159 6.34e-27 106
MS.gene021300.t1 MTR_8g014180 81.818 55 10 0 1 55 1 55 3.82e-25 97.8
MS.gene021300.t1 MTR_7g032380 23.653 427 236 14 17 434 11 356 1.15e-24 104
MS.gene021300.t1 MTR_6g040270 26.364 440 240 20 15 432 2 379 4.38e-24 103
MS.gene021300.t1 MTR_7g056433 27.523 436 250 17 12 434 7 389 7.08e-24 102
MS.gene021300.t1 MTR_1089s0010 25.799 438 245 17 14 434 5 379 1.72e-23 101
MS.gene021300.t1 MTR_7g098510 26.126 444 262 16 2 434 3 391 4.89e-22 97.8
MS.gene021300.t1 MTR_4g056040 28.078 463 252 16 11 409 3 448 1.07e-21 97.8
MS.gene021300.t1 MTR_3g082890 26.371 474 239 18 1 434 81 484 3.01e-20 93.2
MS.gene021300.t1 MTR_4g056030 27.211 441 240 16 11 402 3 411 4.92e-20 92.4
MS.gene021300.t1 MTR_7g032370 25.362 414 238 16 29 434 2 352 1.32e-19 90.1
MS.gene021300.t1 MTR_7g034115 26.950 423 242 17 17 428 11 377 1.83e-19 90.1
MS.gene021300.t1 MTR_4g056070 27.494 451 236 16 11 387 3 436 3.40e-19 89.7
MS.gene021300.t1 MTR_3g105060 26.005 423 245 18 17 434 14 373 1.36e-18 87.4
MS.gene021300.t1 MTR_5g008920 23.503 451 251 14 7 434 2 381 3.89e-18 86.3
MS.gene021300.t1 MTR_4g098590 28.960 404 217 17 19 402 1 354 5.77e-18 85.5
MS.gene021300.t1 MTR_7g115270 24.706 425 275 17 16 431 11 399 9.23e-18 85.1
MS.gene021300.t1 MTR_4g056020 26.932 427 239 16 11 392 3 401 9.68e-18 85.5
MS.gene021300.t1 MTR_4g080787 26.512 430 257 16 16 402 18 431 1.09e-17 85.5
MS.gene021300.t1 MTR_7g026500 26.879 439 241 18 17 433 14 394 1.74e-17 84.3
MS.gene021300.t1 MTR_6g044572 26.991 452 231 22 17 434 2 388 1.79e-17 84.3
MS.gene021300.t1 MTR_1g038710 28.764 445 252 19 2 402 4 427 3.71e-17 83.6
MS.gene021300.t1 MTR_3g107120 25.390 449 238 16 17 434 9 391 5.38e-17 82.8
MS.gene021300.t1 MTR_1g107385 27.533 454 254 21 2 432 20 421 7.41e-17 82.4
MS.gene021300.t1 MTR_1g016340 25.223 448 284 17 7 426 4 428 8.17e-17 82.4
MS.gene021300.t1 MTR_1g016340 25.223 448 284 17 7 426 9 433 1.06e-16 82.4
MS.gene021300.t1 MTR_6g044560 26.797 459 237 22 10 434 171 564 1.08e-16 82.8
MS.gene021300.t1 MTR_7g056420 26.014 419 233 16 16 426 8 357 3.02e-16 82.0
MS.gene021300.t1 MTR_7g056430 26.014 419 233 16 16 426 8 357 4.04e-16 81.6
MS.gene021300.t1 MTR_5g073420 25.688 436 240 16 17 434 11 380 4.24e-16 80.1
MS.gene021300.t1 MTR_4g055990 26.625 477 247 18 11 406 3 457 4.33e-16 80.5
MS.gene021300.t1 MTR_4g055990 26.625 477 247 18 11 406 3 457 4.72e-16 80.5
MS.gene021300.t1 MTR_2g082800 26.392 413 254 17 6 393 17 404 7.66e-16 79.3
MS.gene021300.t1 MTR_4g113810 34.286 175 87 5 98 251 1 168 9.01e-16 75.1
MS.gene021300.t1 MTR_7g055943 24.434 442 250 16 17 434 40 421 1.49e-15 78.6
MS.gene021300.t1 MTR_2g007450 35.196 179 98 6 11 179 10 180 2.05e-15 78.2
MS.gene021300.t1 MTR_3g087260 25.514 486 256 17 15 433 10 456 3.76e-15 77.4
MS.gene021300.t1 MTR_1g115250 25.270 463 251 19 2 418 18 431 4.04e-15 77.4
MS.gene021300.t1 MTR_3g448340 25.688 436 259 17 17 402 6 426 4.92e-15 77.4
MS.gene021300.t1 MTR_2g072720 26.000 450 239 17 5 398 27 438 1.04e-14 76.3
MS.gene021300.t1 MTR_1g021820 28.626 262 151 11 11 264 22 255 1.78e-14 75.5
MS.gene021300.t1 MTR_7g083740 27.907 215 118 6 7 209 3 192 2.05e-14 74.7
MS.gene021300.t1 MTR_5g045170 25.057 435 244 19 19 432 16 389 2.14e-14 75.1
MS.gene021300.t1 MTR_2g007500 27.919 394 204 15 7 382 4 335 3.77e-14 73.6
MS.gene021300.t1 MTR_1g021825 24.413 426 268 15 1 402 1 396 7.56e-14 73.6
MS.gene021300.t1 MTR_1g066830 23.593 462 225 21 17 433 8 386 7.57e-14 73.2
MS.gene021300.t1 MTR_2g005990 23.918 439 260 19 17 432 6 393 7.78e-14 73.2
MS.gene021300.t1 MTR_1g016310 26.642 274 171 11 1 264 3 256 7.94e-14 72.8
MS.gene021300.t1 MTR_1g014450 24.670 454 283 23 4 428 3 426 8.19e-14 73.6
MS.gene021300.t1 MTR_3g107100 30.392 204 109 7 11 196 5 193 1.50e-13 72.4
MS.gene021300.t1 MTR_3g107160 28.910 211 114 7 11 200 4 199 1.69e-13 72.0
MS.gene021300.t1 MTR_1g016310 26.642 274 171 11 1 264 3 256 2.18e-13 72.0
MS.gene021300.t1 MTR_2g007360 24.944 449 234 17 8 432 3 372 3.47e-13 71.2
MS.gene021300.t1 MTR_1g021825 23.821 424 269 14 3 402 74 467 3.61e-13 71.6
MS.gene021300.t1 MTR_3g114200 30.814 172 98 4 4 171 2 156 5.13e-13 67.0
MS.gene021300.t1 MTR_0009s0080 24.700 417 237 16 6 402 8 367 5.44e-13 70.9
MS.gene021300.t1 MTR_8g085430 28.054 221 111 7 17 208 11 212 5.95e-13 70.1
MS.gene021300.t1 MTR_2g047858 29.520 271 147 14 13 271 111 349 7.18e-13 70.9
MS.gene021300.t1 MTR_2g008320 24.722 449 250 18 9 434 44 427 7.47e-13 70.5
MS.gene021300.t1 MTR_2g047872 24.512 461 288 21 3 434 7 436 9.04e-13 70.1
MS.gene021300.t1 MTR_3g099830 24.434 442 227 18 17 432 12 372 9.30e-13 69.7
MS.gene021300.t1 MTR_7g007080 28.470 281 153 10 15 263 2 266 1.21e-12 69.3
MS.gene021300.t1 MTR_4g092430 41.111 90 41 2 3 88 25 106 2.31e-12 68.9
MS.gene021300.t1 MTR_3g026920 26.058 449 245 19 11 431 13 402 2.39e-12 68.6
MS.gene021300.t1 MTR_4g092430 41.111 90 41 2 3 88 25 106 2.64e-12 68.9
MS.gene021300.t1 MTR_4g055580 25.690 471 245 18 11 402 94 538 2.89e-12 68.9
MS.gene021300.t1 MTR_2g007550 31.551 187 95 7 1 180 1 161 3.10e-12 67.8
MS.gene021300.t1 MTR_3g113782 40.625 64 38 0 1 64 1 64 6.61e-12 61.6
MS.gene021300.t1 MTR_7g033990 37.500 120 65 3 17 134 11 122 8.65e-12 67.0
MS.gene021300.t1 MTR_5g083890 25.367 477 213 21 13 428 2 396 9.19e-12 67.4
MS.gene021300.t1 MTR_4g051640 36.364 88 48 1 1 88 14 93 1.52e-11 62.8
MS.gene021300.t1 MTR_1g011430 27.801 241 129 9 12 240 2 209 1.77e-11 65.9
MS.gene021300.t1 MTR_1g115245 28.421 190 107 7 2 175 12 188 2.33e-11 65.1
MS.gene021300.t1 MTR_0049s0110 21.333 450 281 14 17 433 8 417 4.34e-11 64.7
MS.gene021300.t1 MTR_7g056447 28.042 189 106 7 12 198 4 164 5.06e-11 63.9
MS.gene021300.t1 MTR_3g023470 30.247 162 88 6 7 166 5 143 7.53e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene021300.t1 AT4G26340 29.176 449 256 15 17 434 2 419 8.88e-37 139
MS.gene021300.t1 AT5G56370 27.571 457 253 17 17 433 2 420 9.97e-29 117
MS.gene021300.t1 AT5G56370 27.571 457 253 17 17 433 2 420 9.97e-29 117
MS.gene021300.t1 AT3G52680 28.178 472 267 18 1 433 6 444 2.32e-28 116
MS.gene021300.t1 AT5G56420 26.667 450 265 18 17 434 6 422 3.02e-28 115
MS.gene021300.t1 AT5G56420 26.667 450 265 18 17 434 6 422 3.02e-28 115
MS.gene021300.t1 AT5G56420 26.667 450 265 18 17 434 6 422 3.02e-28 115
MS.gene021300.t1 AT5G53840 26.752 471 250 20 10 431 13 437 1.58e-26 111
MS.gene021300.t1 AT4G26350 25.926 459 267 16 17 434 2 428 2.99e-26 110
MS.gene021300.t1 AT4G00160 27.426 474 270 19 1 433 1 441 6.54e-26 109
MS.gene021300.t1 AT5G38570 26.588 425 253 17 17 433 2 375 1.17e-25 107
MS.gene021300.t1 AT5G56440 26.923 468 251 19 17 433 2 429 2.53e-25 107
MS.gene021300.t1 AT5G38590 27.014 422 237 17 17 404 2 386 1.25e-24 105
MS.gene021300.t1 AT1G32375 25.885 452 270 16 17 434 2 422 1.79e-24 105
MS.gene021300.t1 AT1G32375 25.885 452 270 16 17 434 2 422 1.79e-24 105
MS.gene021300.t1 AT4G10400 26.281 449 259 17 17 434 2 409 6.17e-24 103
MS.gene021300.t1 AT4G10400 26.281 449 259 17 17 434 2 409 6.17e-24 103
MS.gene021300.t1 AT4G10400 26.281 449 259 17 17 434 2 409 6.17e-24 103
MS.gene021300.t1 AT2G26860 29.561 433 228 19 17 406 2 400 6.83e-24 103
MS.gene021300.t1 AT2G26860 29.561 433 228 19 17 406 2 400 6.83e-24 103
MS.gene021300.t1 AT3G49030 28.194 454 259 21 15 433 19 440 1.58e-23 102
MS.gene021300.t1 AT4G13965 27.703 444 259 18 17 431 10 420 5.12e-23 100
MS.gene021300.t1 AT1G16930 25.478 471 276 15 10 434 8 449 5.94e-23 100
MS.gene021300.t1 AT1G16930 25.478 471 276 15 10 434 8 449 5.94e-23 100
MS.gene021300.t1 AT1G16930 25.478 471 276 15 10 434 8 449 5.94e-23 100
MS.gene021300.t1 AT1G51370 27.790 457 254 18 10 429 13 430 1.11e-22 100
MS.gene021300.t1 AT5G22730 26.496 468 263 17 16 432 27 464 4.02e-21 95.9
MS.gene021300.t1 AT5G22730 26.496 468 263 17 16 432 27 464 4.02e-21 95.9
MS.gene021300.t1 AT3G26930 27.021 470 266 16 6 434 10 443 5.79e-21 95.1
MS.gene021300.t1 AT3G52680 28.224 411 215 16 1 384 6 363 7.11e-21 94.0
MS.gene021300.t1 AT3G51530 25.895 475 276 19 1 434 14 453 1.33e-20 94.4
MS.gene021300.t1 AT1G78750 24.632 475 294 16 1 431 1 455 2.15e-20 93.6
MS.gene021300.t1 AT1G78750 24.632 475 294 16 1 431 1 455 2.15e-20 93.6
MS.gene021300.t1 AT1G06630 28.398 412 235 13 17 391 12 400 5.63e-20 91.7
MS.gene021300.t1 AT1G06630 28.398 412 235 13 17 391 12 400 5.63e-20 91.7
MS.gene021300.t1 AT1G06630 28.398 412 235 13 17 391 12 400 5.63e-20 91.7
MS.gene021300.t1 AT1G06630 28.398 412 235 13 17 391 12 400 5.63e-20 91.7
MS.gene021300.t1 AT1G06630 28.398 412 235 13 17 391 21 409 8.15e-20 91.3
MS.gene021300.t1 AT1G06630 31.159 276 145 9 17 264 12 270 1.14e-19 89.7
MS.gene021300.t1 AT5G22610 25.942 451 265 19 16 431 17 433 1.24e-19 91.3
MS.gene021300.t1 AT1G78760 23.729 472 282 18 4 432 5 441 1.32e-19 91.3
MS.gene021300.t1 AT5G56400 26.087 483 265 21 1 434 16 455 1.58e-19 90.9
MS.gene021300.t1 AT1G06630 31.159 276 145 9 17 264 12 270 1.88e-19 89.7
MS.gene021300.t1 AT1G06630 31.159 276 145 9 17 264 12 270 1.88e-19 89.7
MS.gene021300.t1 AT2G04230 25.926 459 294 17 7 434 3 446 4.73e-19 89.4
MS.gene021300.t1 AT1G06630 31.159 276 145 9 17 264 12 270 6.07e-19 89.4
MS.gene021300.t1 AT3G59200 31.469 286 131 12 17 264 7 265 8.28e-19 87.8
MS.gene021300.t1 AT5G44490 24.947 473 290 20 1 431 1 450 9.38e-19 88.6
MS.gene021300.t1 AT5G44490 24.947 473 290 20 1 431 1 450 1.14e-18 88.6
MS.gene021300.t1 AT3G50710 26.154 455 270 18 17 434 2 427 1.14e-18 88.2
MS.gene021300.t1 AT1G13780 24.348 460 286 16 17 431 10 452 1.29e-18 88.2
MS.gene021300.t1 AT3G59200 26.434 488 253 20 17 431 7 461 1.80e-18 88.2
MS.gene021300.t1 AT2G26030 24.468 470 270 16 17 431 4 443 2.48e-18 87.4
MS.gene021300.t1 AT2G26030 25.053 471 261 18 17 431 4 438 3.39e-18 86.7
MS.gene021300.t1 AT2G26030 25.053 471 261 18 17 431 4 438 3.39e-18 86.7
MS.gene021300.t1 AT5G38590 28.413 271 150 10 17 263 2 252 3.57e-18 85.1
MS.gene021300.t1 AT5G60610 26.429 420 242 16 17 403 2 387 3.66e-18 86.3
MS.gene021300.t1 AT5G60610 26.429 420 242 16 17 403 2 387 3.66e-18 86.3
MS.gene021300.t1 AT1G80470 22.814 469 291 15 1 432 1 435 4.13e-18 86.7
MS.gene021300.t1 AT5G44950 27.546 432 243 18 17 405 4 408 4.29e-18 86.7
MS.gene021300.t1 AT5G56370 28.977 352 187 15 17 343 2 315 4.59e-18 85.1
MS.gene021300.t1 AT5G22660 24.946 461 272 17 16 431 12 443 8.42e-18 85.9
MS.gene021300.t1 AT1G51370 28.040 403 216 16 10 376 13 377 9.84e-18 85.1
MS.gene021300.t1 AT5G56380 25.054 463 277 16 17 434 2 439 1.25e-17 85.1
MS.gene021300.t1 AT5G56380 25.054 463 277 16 17 434 2 439 1.25e-17 85.1
MS.gene021300.t1 AT3G58860 30.855 269 147 10 14 257 4 258 2.14e-17 84.3
MS.gene021300.t1 AT4G09920 30.120 249 130 10 17 240 2 231 3.68e-17 82.0
MS.gene021300.t1 AT4G09920 30.120 249 130 10 17 240 2 231 3.68e-17 82.0
MS.gene021300.t1 AT4G09920 30.120 249 130 10 17 240 2 231 3.68e-17 82.0
MS.gene021300.t1 AT5G56820 26.383 470 244 21 11 431 7 423 5.42e-17 83.2
MS.gene021300.t1 AT3G26922 30.258 271 145 11 16 262 13 263 5.58e-17 81.6
MS.gene021300.t1 AT3G26922 30.258 271 145 11 16 262 13 263 5.58e-17 81.6
MS.gene021300.t1 AT4G15060 29.762 252 141 11 14 243 23 260 7.00e-17 82.8
MS.gene021300.t1 AT4G09920 30.120 249 130 10 17 240 2 231 8.40e-17 81.3
MS.gene021300.t1 AT4G09920 30.120 249 130 10 17 240 2 231 8.40e-17 81.3
MS.gene021300.t1 AT5G27750 24.364 472 284 18 17 434 5 457 8.99e-17 82.8
MS.gene021300.t1 AT5G22610 25.000 476 268 20 16 431 17 463 1.09e-16 82.4
MS.gene021300.t1 AT5G41840 30.287 383 195 17 17 341 14 382 1.28e-16 82.4
MS.gene021300.t1 AT4G15060 29.719 249 139 11 17 243 172 406 1.60e-16 82.0
MS.gene021300.t1 AT1G66310 23.126 467 295 14 1 431 1 439 1.72e-16 81.6
MS.gene021300.t1 AT5G56690 25.708 424 247 17 19 402 4 399 2.55e-16 80.9
MS.gene021300.t1 AT4G13985 23.779 471 304 15 1 431 1 456 3.00e-16 80.9
MS.gene021300.t1 AT1G69630 24.733 469 284 17 1 426 1 443 3.65e-16 80.9
MS.gene021300.t1 AT3G49020 25.490 459 284 17 8 434 13 445 4.42e-16 80.5
MS.gene021300.t1 AT3G26920 27.139 339 206 12 121 433 16 339 4.62e-16 79.3
MS.gene021300.t1 AT3G26920 27.139 339 206 12 121 433 16 339 4.62e-16 79.3
MS.gene021300.t1 AT1G66290 23.640 478 258 22 11 431 23 450 5.83e-16 80.1
MS.gene021300.t1 AT5G53635 23.340 467 263 15 19 433 2 425 6.18e-16 79.7
MS.gene021300.t1 AT4G27050 30.208 288 152 13 17 270 4 276 6.38e-16 80.1
MS.gene021300.t1 AT4G27050 30.208 288 152 13 17 270 4 276 6.38e-16 80.1
MS.gene021300.t1 AT4G27050 30.208 288 152 13 17 270 4 276 6.38e-16 80.1
MS.gene021300.t1 AT4G27050 30.208 288 152 13 17 270 4 276 6.38e-16 80.1
MS.gene021300.t1 AT4G27050 30.208 288 152 13 17 270 4 276 6.38e-16 80.1
MS.gene021300.t1 AT5G50270 26.773 437 253 19 17 416 2 408 6.52e-16 79.7
MS.gene021300.t1 AT3G58920 26.477 491 264 20 17 434 2 468 1.11e-15 79.3
MS.gene021300.t1 AT5G22720 25.813 492 252 23 11 433 17 464 1.50e-15 79.0
MS.gene021300.t1 AT1G66320 24.096 498 246 23 6 432 19 455 5.65e-15 77.0
MS.gene021300.t1 AT3G59190 30.314 287 158 13 5 264 2 273 6.23e-15 76.6
MS.gene021300.t1 AT5G56800 28.519 270 156 13 182 434 95 344 8.18e-15 75.9
MS.gene021300.t1 AT3G49480 26.258 457 257 18 16 425 11 434 8.93e-15 76.3
MS.gene021300.t1 AT3G59190 30.314 287 158 13 5 264 2 273 8.96e-15 76.6
MS.gene021300.t1 AT4G14103 26.108 406 218 18 17 384 8 369 1.12e-14 76.3
MS.gene021300.t1 AT4G00315 24.359 468 274 22 17 433 2 440 1.26e-14 75.9
MS.gene021300.t1 AT5G56810 26.637 443 271 14 17 431 15 431 1.65e-14 75.5
MS.gene021300.t1 AT1G51370 27.624 362 194 14 10 341 13 336 2.62e-14 74.3
MS.gene021300.t1 AT4G14103 26.455 378 200 17 17 360 8 341 2.94e-14 74.3
MS.gene021300.t1 AT4G14103 26.455 378 200 17 17 360 8 341 2.94e-14 74.3
MS.gene021300.t1 AT5G62970 23.567 471 282 20 17 433 2 448 3.12e-14 74.7
MS.gene021300.t1 AT3G58880 27.671 365 214 15 17 345 3 353 7.70e-14 73.6
MS.gene021300.t1 AT5G25860 24.541 436 237 19 9 376 4 415 9.13e-14 73.2
MS.gene021300.t1 AT1G55660 24.628 471 269 23 17 433 53 491 1.51e-13 72.8
MS.gene021300.t1 AT1G13780 26.006 323 180 13 17 296 10 316 2.39e-13 71.2
MS.gene021300.t1 AT4G14096 27.251 411 232 16 17 384 8 394 2.50e-13 72.0
MS.gene021300.t1 AT4G14096 27.251 411 232 16 17 384 8 394 2.50e-13 72.0
MS.gene021300.t1 AT3G58930 32.584 178 103 7 17 185 2 171 5.63e-13 70.9
MS.gene021300.t1 AT3G58930 32.584 178 103 7 17 185 2 171 5.63e-13 70.9
MS.gene021300.t1 AT3G58930 32.584 178 103 7 17 185 2 171 5.63e-13 70.9
MS.gene021300.t1 AT1G55660 28.400 250 136 12 17 240 53 285 7.28e-13 70.1
MS.gene021300.t1 AT5G22670 24.843 479 273 19 5 434 2 442 7.51e-13 70.5
MS.gene021300.t1 AT2G42730 24.783 460 285 20 17 431 5 448 7.54e-13 70.5
MS.gene021300.t1 AT5G38590 27.650 217 115 9 17 209 2 200 8.13e-13 68.9
MS.gene021300.t1 AT5G56570 21.957 460 291 17 1 434 22 439 1.11e-12 70.1
MS.gene021300.t1 AT3G58900 28.000 275 156 10 17 264 2 261 1.62e-12 68.6
MS.gene021300.t1 AT3G60040 29.643 280 157 14 17 264 13 284 1.78e-12 69.7
MS.gene021300.t1 AT3G58900 28.000 275 156 10 17 264 2 261 2.06e-12 68.6
MS.gene021300.t1 AT3G58900 28.000 275 156 10 17 264 2 261 2.06e-12 68.6
MS.gene021300.t1 AT3G60040 29.643 280 157 14 17 264 232 503 2.37e-12 69.3
MS.gene021300.t1 AT3G60040 29.643 280 157 14 17 264 230 501 2.56e-12 69.3
MS.gene021300.t1 AT5G56410 25.442 452 260 22 17 419 2 425 2.74e-12 68.9
MS.gene021300.t1 AT3G60040 29.643 280 157 14 17 264 232 503 2.75e-12 69.3
MS.gene021300.t1 AT3G60040 29.643 280 157 14 17 264 233 504 2.80e-12 69.3
MS.gene021300.t1 AT5G22700 23.278 421 242 15 3 375 29 416 4.81e-12 68.2
MS.gene021300.t1 AT3G58940 27.419 372 193 18 17 345 2 339 5.70e-12 68.2
MS.gene021300.t1 AT3G58940 27.419 372 193 18 17 345 2 339 5.70e-12 68.2
MS.gene021300.t1 AT3G58900 28.364 275 155 11 17 264 2 261 6.09e-12 67.8
MS.gene021300.t1 AT5G41630 27.056 377 210 16 17 341 12 375 6.73e-12 67.4
MS.gene021300.t1 AT1G78840 22.538 457 289 13 14 431 2 432 1.09e-11 67.0
MS.gene021300.t1 AT1G78840 22.538 457 289 13 14 431 2 432 1.09e-11 67.0
MS.gene021300.t1 AT3G59000 30.126 239 125 10 17 240 2 213 1.25e-11 66.2
MS.gene021300.t1 AT3G28410 25.387 323 177 16 17 307 28 318 1.42e-11 66.6
MS.gene021300.t1 AT5G38396 28.826 281 149 13 17 264 2 264 2.36e-11 65.9
MS.gene021300.t1 AT5G22700 23.227 409 233 15 15 375 4 379 2.51e-11 65.9
MS.gene021300.t1 AT5G22700 23.227 409 233 15 15 375 4 379 2.51e-11 65.9
MS.gene021300.t1 AT5G22700 23.227 409 233 15 15 375 4 379 2.51e-11 65.9
MS.gene021300.t1 AT5G22700 23.227 409 233 15 15 375 4 379 2.51e-11 65.9
MS.gene021300.t1 AT1G13570 22.889 450 278 14 14 433 3 413 3.61e-11 65.1
MS.gene021300.t1 AT1G13570 22.889 450 278 14 14 433 3 413 3.61e-11 65.1
MS.gene021300.t1 AT4G00320 26.525 377 228 14 6 341 2 370 3.98e-11 65.5
MS.gene021300.t1 AT5G22730 28.682 258 130 11 16 239 27 264 4.14e-11 64.7
MS.gene021300.t1 AT3G59230 28.522 291 141 13 17 264 12 278 5.42e-11 64.7
MS.gene021300.t1 AT5G02700 25.625 320 179 15 17 307 27 316 8.50e-11 64.3

Find 86 sgRNAs with CRISPR-Local

Find 176 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTTGAGTATGTTATGCAAAA+AGG 0.247878 6.1:+47519088 MS.gene021300:CDS
AGTTGGGTTCGTGTCGTCAT+TGG 0.303905 6.1:+47516810 MS.gene021300:CDS
AGATCCAGAACTTCGATGTT+TGG 0.318126 6.1:-47518212 None:intergenic
CTCGCCGATGGCAACACCTT+TGG 0.326594 6.1:+47516592 MS.gene021300:CDS
CTGCCCAAACATCGAAGTTC+TGG 0.347616 6.1:+47518208 MS.gene021300:CDS
GCAAACATTGTCCGTGCTAT+TGG 0.349235 6.1:-47518246 None:intergenic
GCCTGAGTGAAACGAGGTTT+GGG 0.354343 6.1:-47516932 None:intergenic
GATCCAGAACTTCGATGTTT+GGG 0.361201 6.1:-47518211 None:intergenic
TGTGGAGCCCATCCTAAAAT+TGG 0.362734 6.1:-47518980 None:intergenic
GCCAGTGGAAACAATTGTTT+TGG 0.363656 6.1:-47516562 None:intergenic
TACGTAATCCCCGCGTCGTT+CGG 0.379541 6.1:+47516721 MS.gene021300:CDS
TAAATTGTTGTCGTTGATAA+GGG 0.382087 6.1:-47516769 None:intergenic
GTAAATTGTTGTCGTTGATA+AGG 0.393847 6.1:-47516770 None:intergenic
TGCCTGAGTGAAACGAGGTT+TGG 0.406372 6.1:-47516933 None:intergenic
GTTGGGTTCGTGTCGTCATT+GGG 0.413997 6.1:+47516811 MS.gene021300:CDS
AAGCAAGCTGAGGAGAGAAT+TGG 0.414523 6.1:-47518720 None:intergenic
GATTATTGCTGATATTTCCT+TGG 0.424455 6.1:+47519129 MS.gene021300:CDS
AACTTGCGAGTCTACCTATA+CGG 0.433159 6.1:-47516671 None:intergenic
AATTGACATCTTCGGTTATG+TGG 0.433299 6.1:+47518154 MS.gene021300:CDS
AAACATCGCTGAATGTGTAT+TGG 0.435155 6.1:-47518367 None:intergenic
TGCCCGTTCAGTTGACAGTT+GGG 0.443838 6.1:+47516794 MS.gene021300:CDS
AACCCAACTGTCAACTGAAC+GGG 0.451315 6.1:-47516796 None:intergenic
ATTTAGATCTCACTCTTCCC+TGG 0.457886 6.1:+47518690 MS.gene021300:CDS
GCCTTCCACCTACCTTGAAA+AGG 0.465640 6.1:+47518267 MS.gene021300:CDS
CGACACATTTCTGATGCTCT+TGG 0.469372 6.1:-47519196 None:intergenic
TACCTATACGGTTAGCAGAT+TGG 0.477461 6.1:-47516659 None:intergenic
TAAATTGAATAAAGGTAAGG+TGG 0.483200 6.1:-47519030 None:intergenic
ACCAAAACAATTGTTTCCAC+TGG 0.491092 6.1:+47516561 MS.gene021300:CDS
GTGCCCGTTCAGTTGACAGT+TGG 0.498017 6.1:+47516793 MS.gene021300:CDS
AGCTCCTCAACAATCTCTCC+AGG 0.498119 6.1:+47518474 MS.gene021300:CDS
CGGTTATGTGGAAGTGCCTA+TGG 0.502768 6.1:+47518166 MS.gene021300:CDS
TACCAATCTGCTAACCGTAT+AGG 0.513924 6.1:+47516657 MS.gene021300:CDS
GAATGTCGTACTTCATACCT+TGG 0.514533 6.1:-47519153 None:intergenic
CTGGCTGTCTTTCTCGCCGA+TGG 0.519124 6.1:+47516580 MS.gene021300:CDS
CGTCATTGGGCCTCACCTCA+AGG 0.523497 6.1:+47516824 MS.gene021300:CDS
AAATTGAATAAAGGTAAGGT+GGG 0.524970 6.1:-47519029 None:intergenic
TTGTTGAGGAGCTTGAGTAA+TGG 0.526520 6.1:-47518464 None:intergenic
CTCAGAGGAAGCTTGAAGTC+GGG 0.527584 6.1:-47516897 None:intergenic
GGTATGACAGGATGTGGTTG+AGG 0.532367 6.1:-47516533 None:intergenic
ATCAAAATAGAGAATGAAGA+CGG 0.536422 6.1:+47518296 MS.gene021300:CDS
TATACGGTTAGCAGATTGGT+AGG 0.540234 6.1:-47516655 None:intergenic
GCTCAGAGGAAGCTTGAAGT+CGG 0.541393 6.1:-47516898 None:intergenic
GGCGCATTTATTTCAAGCGA+AGG 0.542343 6.1:-47518320 None:intergenic
CACTTAGGAGCACTAGGCTG+TGG 0.544015 6.1:-47518998 None:intergenic
GCTGATATTTCCTTGGACCA+AGG 0.544949 6.1:+47519136 MS.gene021300:CDS
ATGTGGTTGAGGACATCGTC+TGG 0.546232 6.1:-47516522 None:intergenic
TTCGATGATGATGACGTCGA+TGG 0.546235 6.1:+47516873 MS.gene021300:CDS
CGCATCTTCCGAACGACGCG+GGG 0.555033 6.1:-47516729 None:intergenic
GTTTCCAAAGGTGTTGCCAT+CGG 0.556729 6.1:-47516596 None:intergenic
ATACTGCTAATTGACATCTT+CGG 0.557259 6.1:+47518146 MS.gene021300:CDS
TCTTAAAATTCGAAACGAGA+AGG 0.560481 6.1:+47518766 MS.gene021300:CDS
TACGGTTAGCAGATTGGTAG+GGG 0.562191 6.1:-47516653 None:intergenic
ACGCATCTTCCGAACGACGC+GGG 0.563207 6.1:-47516730 None:intergenic
GCCCAAACCTCGTTTCACTC+AGG 0.564786 6.1:+47516931 MS.gene021300:CDS
GAACCCAACTGTCAACTGAA+CGG 0.574470 6.1:-47516797 None:intergenic
TCGGGAGGTATGACAGGATG+TGG 0.575276 6.1:-47516539 None:intergenic
GACGTCATCATCATCGAAGA+CGG 0.575327 6.1:-47516868 None:intergenic
ACGAGACACTTAGGAGCACT+AGG 0.575659 6.1:-47519004 None:intergenic
AGGTGGGATACGAGACACTT+AGG 0.576697 6.1:-47519013 None:intergenic
CGAGGTTTGGGCAAGTGAAG+AGG 0.580117 6.1:-47516920 None:intergenic
CATCGGAAGAGAAAGATGAC+AGG 0.581185 6.1:+47516487 MS.gene021300:CDS
TCAAAATAGAGAATGAAGAC+GGG 0.581709 6.1:+47518297 MS.gene021300:CDS
GCGGACGAACAGTGGCTGCT+TGG 0.585344 6.1:+47518623 MS.gene021300:intron
GAGAGAATTGGAGTTAAACC+AGG 0.588263 6.1:-47518708 None:intergenic
ACGTCATCATCATCGAAGAC+GGG 0.589288 6.1:-47516867 None:intergenic
ATACGGTTAGCAGATTGGTA+GGG 0.592022 6.1:-47516654 None:intergenic
CATAGTAGTGCATTCACCAT+AGG 0.595572 6.1:-47518182 None:intergenic
GTACTTCATACCTTGGTCCA+AGG 0.607563 6.1:-47519146 None:intergenic
TTTGAGTGATTCAACAACCA+AGG 0.609632 6.1:+47518511 MS.gene021300:CDS
GGGCAAGTGAAGAGGCTCAG+AGG 0.612863 6.1:-47516912 None:intergenic
CATCATCATCGAAGACGGGA+AGG 0.613821 6.1:-47516863 None:intergenic
TTGTCCTGGAGAGATTGTTG+AGG 0.613886 6.1:-47518478 None:intergenic
TCGGCGAGAAAGACAGCCAG+TGG 0.623218 6.1:-47516577 None:intergenic
AGGTCGAGTTCCTTGAGGTG+AGG 0.625001 6.1:-47516834 None:intergenic
CGAAGACGGGAAGGAGATCG+AGG 0.630663 6.1:-47516854 None:intergenic
GATCGAGGTCGAGTTCCTTG+AGG 0.642609 6.1:-47516839 None:intergenic
CCACATGGAGATGTTTCCAA+AGG 0.649931 6.1:-47516608 None:intergenic
GACATTTGTGAAGCAAGCTG+AGG 0.652699 6.1:-47518730 None:intergenic
ATGGTGAATGCACTACTATG+TGG 0.653386 6.1:+47518185 MS.gene021300:CDS
AGAGAATTGGAGTTAAACCA+GGG 0.654053 6.1:-47518707 None:intergenic
ACGACGAAATCATACGACAA+AGG 0.659001 6.1:-47518440 None:intergenic
GACGCATCTTCCGAACGACG+CGG 0.678397 6.1:-47516731 None:intergenic
ATTCACAGAAATCTACCACA+TGG 0.692434 6.1:-47516623 None:intergenic
GAACGACGCGGGGATTACGT+AGG 0.692885 6.1:-47516719 None:intergenic
GCACGTGCCTGAGTGAAACG+AGG 0.718712 6.1:-47516938 None:intergenic
CCTTTGGAAACATCTCCATG+TGG 0.759947 6.1:+47516608 MS.gene021300:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTCAATTTAAAAAATTTCA+TGG + chr6.1:47519043-47519062 MS.gene021300:CDS 10.0%
!! TTAAATAATAAATGTTATTG+TGG + chr6.1:47516991-47517010 MS.gene021300:intron 10.0%
!!! TTAAATCTATGAAACATTTT+TGG + chr6.1:47517941-47517960 MS.gene021300:intron 15.0%
!!! TTGATTTTGATTAAATTCAT+AGG + chr6.1:47517302-47517321 MS.gene021300:intron 15.0%
!!! TTTTAAATTGAATAAAGGTA+AGG - chr6.1:47519036-47519055 None:intergenic 15.0%
!! AAAAAAAAGAAGAAGAAGAT+TGG - chr6.1:47517046-47517065 None:intergenic 20.0%
!! AAAAAACTAGCAGTAAAAAA+TGG - chr6.1:47516966-47516985 None:intergenic 20.0%
!! ACTAAAATAAAACTTAACCT+TGG - chr6.1:47518531-47518550 None:intergenic 20.0%
!! GGAATTAAGTTACTAATTAT+TGG - chr6.1:47517794-47517813 None:intergenic 20.0%
!! TATATCTACATAGATAGATA+TGG + chr6.1:47518574-47518593 MS.gene021300:intron 20.0%
!!! ATGTGTATTGGTAAATTTTA+AGG - chr6.1:47518358-47518377 None:intergenic 20.0%
!!! ATTTTAAGAACTTCAAGAAT+AGG - chr6.1:47518755-47518774 None:intergenic 20.0%
!!! TTAATCTTTTGTATAAACCT+TGG + chr6.1:47517544-47517563 MS.gene021300:intron 20.0%
!!! TTTTCAAAGTATCATGTAAT+TGG - chr6.1:47517815-47517834 None:intergenic 20.0%
! AAATTGAATAAAGGTAAGGT+GGG - chr6.1:47519032-47519051 None:intergenic 25.0%
! AATTGATTAATTTCGCATCA+AGG - chr6.1:47518826-47518845 None:intergenic 25.0%
! AGAAGAAGATAATTGTTGAA+TGG + chr6.1:47517738-47517757 MS.gene021300:intron 25.0%
! ATCAAAATAGAGAATGAAGA+CGG + chr6.1:47518296-47518315 MS.gene021300:CDS 25.0%
! ATTCTTGAAAAAGTAGATCA+CGG - chr6.1:47518655-47518674 None:intergenic 25.0%
! CTAATTAATACTTGACAATG+CGG + chr6.1:47518604-47518623 MS.gene021300:intron 25.0%
! TAAATTGAATAAAGGTAAGG+TGG - chr6.1:47519033-47519052 None:intergenic 25.0%
! TGATTTAGTGTGTAAATTGA+TGG - chr6.1:47517907-47517926 None:intergenic 25.0%
! TTGTGCATTTCAAATTACAA+CGG + chr6.1:47517334-47517353 MS.gene021300:intron 25.0%
!! TAAATTGTTGTCGTTGATAA+GGG - chr6.1:47516772-47516791 None:intergenic 25.0%
!! TAACTTTTTAACCAATAGCA+CGG + chr6.1:47518235-47518254 MS.gene021300:CDS 25.0%
!! TACTTTATGTCATAGCTTTA+AGG - chr6.1:47517231-47517250 None:intergenic 25.0%
!!! ACACACTAAATCACTTTTTT+GGG + chr6.1:47517914-47517933 MS.gene021300:intron 25.0%
!!! ACTTTATGTCATAGCTTTAA+GGG - chr6.1:47517230-47517249 None:intergenic 25.0%
!!! ATTTTAAGGTACTCAAGATT+TGG - chr6.1:47518344-47518363 None:intergenic 25.0%
!!! TACACACTAAATCACTTTTT+TGG + chr6.1:47517913-47517932 MS.gene021300:intron 25.0%
!!! TCAAAAGTCTTTTGGAAAAT+TGG + chr6.1:47517669-47517688 MS.gene021300:intron 25.0%
ACAACACGACATAAACATAT+TGG - chr6.1:47517970-47517989 None:intergenic 30.0%
AGAATCACATACCTGATTAA+CGG + chr6.1:47517575-47517594 MS.gene021300:intron 30.0%
ATACTGCTAATTGACATCTT+CGG + chr6.1:47518146-47518165 MS.gene021300:CDS 30.0%
ATCCACTAAAAAAACTTCAG+AGG + chr6.1:47517474-47517493 MS.gene021300:intron 30.0%
GATTATTGCTGATATTTCCT+TGG + chr6.1:47519129-47519148 MS.gene021300:CDS 30.0%
GATTCAAGTCATATACACTT+TGG - chr6.1:47518002-47518021 None:intergenic 30.0%
GTAAATTGTTGTCGTTGATA+AGG - chr6.1:47516773-47516792 None:intergenic 30.0%
GTTGAGTATGTTATGCAAAA+AGG + chr6.1:47519088-47519107 MS.gene021300:CDS 30.0%
TCAAAATAGAGAATGAAGAC+GGG + chr6.1:47518297-47518316 MS.gene021300:CDS 30.0%
TCTTAAAATTCGAAACGAGA+AGG + chr6.1:47518766-47518785 MS.gene021300:CDS 30.0%
TTCTTGAAAAAGTAGATCAC+GGG - chr6.1:47518654-47518673 None:intergenic 30.0%
TTGTGGAAAAGTTGAATCTT+TGG + chr6.1:47517008-47517027 MS.gene021300:intron 30.0%
! TGTGTAAATTGATGGCATAT+TGG - chr6.1:47517899-47517918 None:intergenic 30.0%
!! CTTTATGTCATAGCTTTAAG+GGG - chr6.1:47517229-47517248 None:intergenic 30.0%
!! TTTGATTTTCAGCCTTTTCA+AGG - chr6.1:47518282-47518301 None:intergenic 30.0%
AAACATCGCTGAATGTGTAT+TGG - chr6.1:47518370-47518389 None:intergenic 35.0%
AATTGACATCTTCGGTTATG+TGG + chr6.1:47518154-47518173 MS.gene021300:CDS 35.0%
ACCAAAACAATTGTTTCCAC+TGG + chr6.1:47516561-47516580 MS.gene021300:CDS 35.0%
AGAGAATTGGAGTTAAACCA+GGG - chr6.1:47518710-47518729 None:intergenic 35.0%
ATTAGCAGTATCTTCAGTGA+TGG - chr6.1:47518137-47518156 None:intergenic 35.0%
ATTCAATCAGTGTGACTTAC+AGG - chr6.1:47517100-47517119 None:intergenic 35.0%
ATTCACAGAAATCTACCACA+TGG - chr6.1:47516626-47516645 None:intergenic 35.0%
TCTTGAAAAAGTAGATCACG+GGG - chr6.1:47518653-47518672 None:intergenic 35.0%
TGTGATTCTATGTATAGCCA+AGG - chr6.1:47517564-47517583 None:intergenic 35.0%
TTCGTAAAAGATGTCTTGCA+GGG + chr6.1:47517450-47517469 MS.gene021300:intron 35.0%
TTGATTGCAAATGAGACTGT+AGG + chr6.1:47517188-47517207 MS.gene021300:intron 35.0%
TTTGAGTGATTCAACAACCA+AGG + chr6.1:47518511-47518530 MS.gene021300:CDS 35.0%
! CAAAACTAGATGTTTTGTCC+TGG - chr6.1:47518495-47518514 None:intergenic 35.0%
! CAGGTATAAGTATTGTGTGT+TGG - chr6.1:47517081-47517100 None:intergenic 35.0%
! CTCAAAACGACAAAAAGCAT+CGG + chr6.1:47516470-47516489 MS.gene021300:CDS 35.0%
!! AACAGTCACCAATTTTAGGA+TGG + chr6.1:47518972-47518991 MS.gene021300:CDS 35.0%
!! ATTTTCAGCCTTTTCAAGGT+AGG - chr6.1:47518278-47518297 None:intergenic 35.0%
!!! ACAGTCACCAATTTTAGGAT+GGG + chr6.1:47518973-47518992 MS.gene021300:CDS 35.0%
!!! AGCCTCTGAAGTTTTTTTAG+TGG - chr6.1:47517479-47517498 None:intergenic 35.0%
!!! GTGGAAACAATTGTTTTGGT+CGG - chr6.1:47516561-47516580 None:intergenic 35.0%
!!! TGGAAACAATTGTTTTGGTC+GGG - chr6.1:47516560-47516579 None:intergenic 35.0%
AACGAGGATGTATTGAGTCA+AGG - chr6.1:47517376-47517395 None:intergenic 40.0%
AACTTGCGAGTCTACCTATA+CGG - chr6.1:47516674-47516693 None:intergenic 40.0%
ACGACGAAATCATACGACAA+AGG - chr6.1:47518443-47518462 None:intergenic 40.0%
AGATCCAGAACTTCGATGTT+TGG - chr6.1:47518215-47518234 None:intergenic 40.0%
AGATTCTCTAGCCGTTAATC+AGG - chr6.1:47517589-47517608 None:intergenic 40.0%
ATACGGTTAGCAGATTGGTA+GGG - chr6.1:47516657-47516676 None:intergenic 40.0%
ATGGTGAATGCACTACTATG+TGG + chr6.1:47518185-47518204 MS.gene021300:CDS 40.0%
ATGTAAACTTGTCCACACCA+AGG + chr6.1:47517621-47517640 MS.gene021300:intron 40.0%
ATTGAATGAGACGGGAAACT+AGG + chr6.1:47517113-47517132 MS.gene021300:intron 40.0%
ATTGTCGAACACCAATGTCT+TGG + chr6.1:47517870-47517889 MS.gene021300:intron 40.0%
ATTTAGATCTCACTCTTCCC+TGG + chr6.1:47518690-47518709 MS.gene021300:CDS 40.0%
CATAGTAGTGCATTCACCAT+AGG - chr6.1:47518185-47518204 None:intergenic 40.0%
CATATTGGACACCAAGACAT+TGG - chr6.1:47517884-47517903 None:intergenic 40.0%
GAATGTCGTACTTCATACCT+TGG - chr6.1:47519156-47519175 None:intergenic 40.0%
GAATTCCATTGCTAAGACTG+TGG - chr6.1:47518079-47518098 None:intergenic 40.0%
GAGAGAATTGGAGTTAAACC+AGG - chr6.1:47518711-47518730 None:intergenic 40.0%
GATCCAGAACTTCGATGTTT+GGG - chr6.1:47518214-47518233 None:intergenic 40.0%
GGAAGTTGAATATGCTACAG+AGG + chr6.1:47517690-47517709 MS.gene021300:intron 40.0%
GTCTTGAAGGAGACAAATGA+GGG + chr6.1:47517644-47517663 MS.gene021300:intron 40.0%
GTTCGTAAAAGATGTCTTGC+AGG + chr6.1:47517449-47517468 MS.gene021300:intron 40.0%
TACCAATCTGCTAACCGTAT+AGG + chr6.1:47516657-47516676 MS.gene021300:CDS 40.0%
TACCTATACGGTTAGCAGAT+TGG - chr6.1:47516662-47516681 None:intergenic 40.0%
TATACGGTTAGCAGATTGGT+AGG - chr6.1:47516658-47516677 None:intergenic 40.0%
TCTGTGTCGTGACAAACAAT+AGG + chr6.1:47517410-47517429 MS.gene021300:intron 40.0%
TGTAAACTTGTCCACACCAA+GGG + chr6.1:47517622-47517641 MS.gene021300:intron 40.0%
TTGAATGAGACGGGAAACTA+GGG + chr6.1:47517114-47517133 MS.gene021300:intron 40.0%
TTGACTCAATACATCCTCGT+TGG + chr6.1:47517375-47517394 MS.gene021300:intron 40.0%
TTGTTCCACAGTCTTAGCAA+TGG + chr6.1:47518071-47518090 MS.gene021300:intron 40.0%
TTGTTGAGGAGCTTGAGTAA+TGG - chr6.1:47518467-47518486 None:intergenic 40.0%
! CAGGAACAGTCACCAATTTT+AGG + chr6.1:47518968-47518987 MS.gene021300:intron 40.0%
! CTAAAATTGGTGACTGTTCC+TGG - chr6.1:47518970-47518989 None:intergenic 40.0%
! GCCAGTGGAAACAATTGTTT+TGG - chr6.1:47516565-47516584 None:intergenic 40.0%
! GTCACACTGATTGAATGAGA+CGG + chr6.1:47517104-47517123 MS.gene021300:intron 40.0%
! GTTTATGTCGTGTTGTTGTC+TGG + chr6.1:47517974-47517993 MS.gene021300:intron 40.0%
! TCACACTGATTGAATGAGAC+GGG + chr6.1:47517105-47517124 MS.gene021300:intron 40.0%
!! ACATCCTCGTTGGTAATGAT+AGG + chr6.1:47517385-47517404 MS.gene021300:intron 40.0%
!!! AAACAATTGTTTTGGTCGGG+AGG - chr6.1:47516557-47516576 None:intergenic 40.0%
!!! TGAGGGCATCAAAAGTCTTT+TGG + chr6.1:47517661-47517680 MS.gene021300:intron 40.0%
AACCCAACTGTCAACTGAAC+GGG - chr6.1:47516799-47516818 None:intergenic 45.0%
AAGCAAGCTGAGGAGAGAAT+TGG - chr6.1:47518723-47518742 None:intergenic 45.0%
ACGTCATCATCATCGAAGAC+GGG - chr6.1:47516870-47516889 None:intergenic 45.0%
AGAAGAAGATTGGAGCGATG+AGG - chr6.1:47517036-47517055 None:intergenic 45.0%
CATCGGAAGAGAAAGATGAC+AGG + chr6.1:47516487-47516506 MS.gene021300:CDS 45.0%
CCACATGGAGATGTTTCCAA+AGG - chr6.1:47516611-47516630 None:intergenic 45.0%
CGACACATTTCTGATGCTCT+TGG - chr6.1:47519199-47519218 None:intergenic 45.0%
GAACCCAACTGTCAACTGAA+CGG - chr6.1:47516800-47516819 None:intergenic 45.0%
GAAGCCTATCATTACCAACG+AGG - chr6.1:47517392-47517411 None:intergenic 45.0%
GACATTTGTGAAGCAAGCTG+AGG - chr6.1:47518733-47518752 None:intergenic 45.0%
GACGTCATCATCATCGAAGA+CGG - chr6.1:47516871-47516890 None:intergenic 45.0%
GCAAACATTGTCCGTGCTAT+TGG - chr6.1:47518249-47518268 None:intergenic 45.0%
GCTGATATTTCCTTGGACCA+AGG + chr6.1:47519136-47519155 MS.gene021300:CDS 45.0%
GGCGCATTTATTTCAAGCGA+AGG - chr6.1:47518323-47518342 None:intergenic 45.0%
GGTCTTGAAGGAGACAAATG+AGG + chr6.1:47517643-47517662 MS.gene021300:intron 45.0%
GTACTTCATACCTTGGTCCA+AGG - chr6.1:47519149-47519168 None:intergenic 45.0%
TACGGTTAGCAGATTGGTAG+GGG - chr6.1:47516656-47516675 None:intergenic 45.0%
TGTGGAGCCCATCCTAAAAT+TGG - chr6.1:47518983-47519002 None:intergenic 45.0%
TTGTCCTGGAGAGATTGTTG+AGG - chr6.1:47518481-47518500 None:intergenic 45.0%
TTTGTCTCCTTCAAGACCCT+TGG - chr6.1:47517641-47517660 None:intergenic 45.0%
! AAATTGGTGACTGTTCCTGG+AGG - chr6.1:47518967-47518986 None:intergenic 45.0%
! CAAATCCTTTTGTTGCCTCC+AGG + chr6.1:47518949-47518968 MS.gene021300:intron 45.0%
! CCTTTGGAAACATCTCCATG+TGG + chr6.1:47516608-47516627 MS.gene021300:CDS 45.0%
! TTCGATGATGATGACGTCGA+TGG + chr6.1:47516873-47516892 MS.gene021300:CDS 45.0%
!! GTTTCCAAAGGTGTTGCCAT+CGG - chr6.1:47516599-47516618 None:intergenic 45.0%
!! TTCAGCCTTTTCAAGGTAGG+TGG - chr6.1:47518275-47518294 None:intergenic 45.0%
!!! AAATTTTTTAAATTGAATAA+AGG - chr6.1:47519041-47519060 None:intergenic 5.0%
AGCTCCTCAACAATCTCTCC+AGG + chr6.1:47518474-47518493 MS.gene021300:CDS 50.0%
AGGTGGGATACGAGACACTT+AGG - chr6.1:47519016-47519035 None:intergenic 50.0%
AGTTGGGTTCGTGTCGTCAT+TGG + chr6.1:47516810-47516829 MS.gene021300:CDS 50.0%
ATGTGGTTGAGGACATCGTC+TGG - chr6.1:47516525-47516544 None:intergenic 50.0%
CATCATCATCGAAGACGGGA+AGG - chr6.1:47516866-47516885 None:intergenic 50.0%
CTCAGAGGAAGCTTGAAGTC+GGG - chr6.1:47516900-47516919 None:intergenic 50.0%
CTGCCCAAACATCGAAGTTC+TGG + chr6.1:47518208-47518227 MS.gene021300:CDS 50.0%
CTGTTCCTGGAGGCAACAAA+AGG - chr6.1:47518957-47518976 None:intergenic 50.0%
GAGACGGGAAACTAGGGTTA+GGG + chr6.1:47517120-47517139 MS.gene021300:intron 50.0%
GCCTGAGTGAAACGAGGTTT+GGG - chr6.1:47516935-47516954 None:intergenic 50.0%
GCCTTCCACCTACCTTGAAA+AGG + chr6.1:47518267-47518286 MS.gene021300:CDS 50.0%
GCTCAGAGGAAGCTTGAAGT+CGG - chr6.1:47516901-47516920 None:intergenic 50.0%
GGTATGACAGGATGTGGTTG+AGG - chr6.1:47516536-47516555 None:intergenic 50.0%
GTTGGGTTCGTGTCGTCATT+GGG + chr6.1:47516811-47516830 MS.gene021300:CDS 50.0%
TGAGACGGGAAACTAGGGTT+AGG + chr6.1:47517119-47517138 MS.gene021300:intron 50.0%
TGCCCGTTCAGTTGACAGTT+GGG + chr6.1:47516794-47516813 MS.gene021300:CDS 50.0%
TGCCTGAGTGAAACGAGGTT+TGG - chr6.1:47516936-47516955 None:intergenic 50.0%
TTGACAATGCGGACGAACAG+TGG + chr6.1:47518615-47518634 MS.gene021300:intron 50.0%
!! ACGAGACACTTAGGAGCACT+AGG - chr6.1:47519007-47519026 None:intergenic 50.0%
!! CGGTTATGTGGAAGTGCCTA+TGG + chr6.1:47518166-47518185 MS.gene021300:CDS 50.0%
!! GCCTTTTCAAGGTAGGTGGA+AGG - chr6.1:47518271-47518290 None:intergenic 50.0%
!! TTTTGGTCGGGAGGTATGAC+AGG - chr6.1:47516548-47516567 None:intergenic 50.0%
AGGTCGAGTTCCTTGAGGTG+AGG - chr6.1:47516837-47516856 None:intergenic 55.0%
CGAGGTTTGGGCAAGTGAAG+AGG - chr6.1:47516923-47516942 None:intergenic 55.0%
CTCCTTCAAGACCCTTGGTG+TGG - chr6.1:47517636-47517655 None:intergenic 55.0%
GATCGAGGTCGAGTTCCTTG+AGG - chr6.1:47516842-47516861 None:intergenic 55.0%
GCCCAAACCTCGTTTCACTC+AGG + chr6.1:47516931-47516950 MS.gene021300:CDS 55.0%
GTCCACACCAAGGGTCTTGA+AGG + chr6.1:47517631-47517650 MS.gene021300:intron 55.0%
GTGCCCGTTCAGTTGACAGT+TGG + chr6.1:47516793-47516812 MS.gene021300:CDS 55.0%
TACGTAATCCCCGCGTCGTT+CGG + chr6.1:47516721-47516740 MS.gene021300:CDS 55.0%
! TCGGGAGGTATGACAGGATG+TGG - chr6.1:47516542-47516561 None:intergenic 55.0%
!! CACTTAGGAGCACTAGGCTG+TGG - chr6.1:47519001-47519020 None:intergenic 55.0%
ACGCATCTTCCGAACGACGC+GGG - chr6.1:47516733-47516752 None:intergenic 60.0%
CGAAGACGGGAAGGAGATCG+AGG - chr6.1:47516857-47516876 None:intergenic 60.0%
CGTCATTGGGCCTCACCTCA+AGG + chr6.1:47516824-47516843 MS.gene021300:CDS 60.0%
CTCGCCGATGGCAACACCTT+TGG + chr6.1:47516592-47516611 MS.gene021300:CDS 60.0%
CTGGCTGTCTTTCTCGCCGA+TGG + chr6.1:47516580-47516599 MS.gene021300:CDS 60.0%
GAACGACGCGGGGATTACGT+AGG - chr6.1:47516722-47516741 None:intergenic 60.0%
GACGCATCTTCCGAACGACG+CGG - chr6.1:47516734-47516753 None:intergenic 60.0%
GCACGTGCCTGAGTGAAACG+AGG - chr6.1:47516941-47516960 None:intergenic 60.0%
GGGCAAGTGAAGAGGCTCAG+AGG - chr6.1:47516915-47516934 None:intergenic 60.0%
TCGGCGAGAAAGACAGCCAG+TGG - chr6.1:47516580-47516599 None:intergenic 60.0%
CGCATCTTCCGAACGACGCG+GGG - chr6.1:47516732-47516751 None:intergenic 65.0%
GCGGACGAACAGTGGCTGCT+TGG + chr6.1:47518623-47518642 MS.gene021300:intron 65.0%


Chromosome Type Strat End Strand Name
chr6.1 gene 47516456 47519234 47516456 ID=MS.gene021300
chr6.1 mRNA 47516456 47519234 47516456 ID=MS.gene021300.t1;Parent=MS.gene021300
chr6.1 exon 47516456 47516956 47516456 ID=MS.gene021300.t1.exon1;Parent=MS.gene021300.t1
chr6.1 CDS 47516456 47516956 47516456 ID=cds.MS.gene021300.t1;Parent=MS.gene021300.t1
chr6.1 exon 47518146 47518532 47518146 ID=MS.gene021300.t1.exon2;Parent=MS.gene021300.t1
chr6.1 CDS 47518146 47518532 47518146 ID=cds.MS.gene021300.t1;Parent=MS.gene021300.t1
chr6.1 exon 47518635 47518787 47518635 ID=MS.gene021300.t1.exon3;Parent=MS.gene021300.t1
chr6.1 CDS 47518635 47518787 47518635 ID=cds.MS.gene021300.t1;Parent=MS.gene021300.t1
chr6.1 exon 47518971 47519234 47518971 ID=MS.gene021300.t1.exon4;Parent=MS.gene021300.t1
chr6.1 CDS 47518971 47519234 47518971 ID=cds.MS.gene021300.t1;Parent=MS.gene021300.t1
Gene Sequence

>MS.gene021300

ATGGCAGAGTCAAACTCAAAACGACAAAAAGCATCGGAAGAGAAAGATGACAGGATCAGTAGTTTACCAGACGATGTCCTCAACCACATCCTGTCATACCTCCCGACCAAAACAATTGTTTCCACTGGCTGTCTTTCTCGCCGATGGCAACACCTTTGGAAACATCTCCATGTGGTAGATTTCTGTGAATATGATTACCCCTACCAATCTGCTAACCGTATAGGTAGACTCGCAAGTTTTGCTATTTTTGTGAACAACGTGCTCCTACGTAATCCCCGCGTCGTTCGGAAGATGCGTCTTACTTGTGCTCACTCCCTTATCAACGACAACAATTTACGTGCCCGTTCAGTTGACAGTTGGGTTCGTGTCGTCATTGGGCCTCACCTCAAGGAACTCGACCTCGATCTCCTTCCCGTCTTCGATGATGATGACGTCGATGGACCCGACTTCAAGCTTCCTCTGAGCCTCTTCACTTGCCCAAACCTCGTTTCACTCAGGCACGTGCTTCCATTTTTTACTGCTAGTTTTTTCTTTTTTAAATAATAAATGTTATTGTGGAAAAGTTGAATCTTTGGTTCCTCATCGCTCCAATCTTCTTCTTCTTTTTTTTTTTTTTTAATCACCAACACACAATACTTATACCTGTAAGTCACACTGATTGAATGAGACGGGAAACTAGGGTTAGGGACGAACAGATAAAATATGAAAAAAGATAATTGTTGAAATGTTTGATTGATTGCAAATGAGACTGTAGGTCAAGTTTAAATGCACCCCTTAAAGCTATGACATAAAGTAAAACTATTAATTATTCAAGATAATCTTATGAACAATGCTTTTTACAACATTTTGATTTTGATTAAATTCATAGGTATAGATGTTTGTGCATTTCAAATTACAACGGTGTTTTAGAAGAATTTCCTTGACTCAATACATCCTCGTTGGTAATGATAGGCTTCTGTGTCGTGACAAACAATAGGAACTTCAGAATAAGTAGTTCGTAAAAGATGTCTTGCAGGGAATCCACTAAAAAAACTTCAGAGGCTAACTGAAGAAATACTAATCATCTTCAAAAACTAAATTGAAATTATTTAATCTTTTGTATAAACCTTGGCTATACATAGAATCACATACCTGATTAACGGCTAGAGAATCTAAAGTAGAAATTATGTAAACTTGTCCACACCAAGGGTCTTGAAGGAGACAAATGAGGGCATCAAAAGTCTTTTGGAAAATTGGAAGTTGAATATGCTACAGAGGAAAAATTATACAAAAAATTGTAGAGAGAAGAAGATAATTGTTGAATGGTTGATTGATTGATTTGAAATAGCTAGTATACCAATAATTAGTAACTTAATTCCAATTACATGATACTTTGAAAATATATAAGTAATTGAATGTGATCAATATGTCATGTATTGTCGAACACCAATGTCTTGGTGTCCAATATGCCATCAATTTACACACTAAATCACTTTTTTGGGATTTTTAAATCTATGAAACATTTTTGGTAACCAATATGTTTATGTCGTGTTGTTGTCTGGCACCAAAGTGTATATGACTTGAATCTTATGTATCAGTGCTAAATAGTTATGAAATGTGATATAAAATAATTTGTTTGTTCCACAGTCTTAGCAATGGAATTCATCTAAACATACAAAGATCTACGACAATAAGTTTACCATCACTGAAGATACTGCTAATTGACATCTTCGGTTATGTGGAAGTGCCTATGGTGAATGCACTACTATGTGGCTGCCCAAACATCGAAGTTCTGGATCTTAACTTTTTAACCAATAGCACGGACAATGTTTGCCTTCCACCTACCTTGAAAAGGCTGAAAATCAAAATAGAGAATGAAGACGGGCCTTCGCTTGAAATAAATGCGCCAAATCTTGAGTACCTTAAAATTTACCAATACACATTCAGCGATGTTTTAAACATGAAAAACTTGCTCAACGTTGTAGAAGCAAGTCTTGATCTCTATCCTTTGTCGTATGATTTCGTCGTTCCATTACTCAAGCTCCTCAACAATCTCTCCAGGACAAAACATCTAGTTTTGAGTGATTCAACAACCAAGGTTAAGTTTTATTTTAGTTATTTAATGTTTACTTCATAATTTATATCTACATAGATAGATATGGTTTTGTACTAATTAATACTTGACAATGCGGACGAACAGTGGCTGCTTGGTGAACCCCGTGATCTACTTTTTCAAGAATTTTGCTATTTGCTTCATTTAGATCTCACTCTTCCCTGGTTTAACTCCAATTCTCTCCTCAGCTTGCTTCACAAATGTCCTATTCTTGAAGTTCTTAAAATTCGAAACGAGAAGGTTTGTTTAATCGAAGCTTAATTTGATGTACATAACCTTGATGCGAAATTAATCAATTTTAATGAAATTGATTACATAAATTAGAAGTAGCATCTTATTGAACAGTACATAACTTAATGTATAACATGATTAGTTTATTACTATGAATATTGCATCTTATTCAAATCCTTTTGTTGCCTCCAGGAACAGTCACCAATTTTAGGATGGGCTCCACAGCCTAGTGCTCCTAAGTGTCTCGTATCCCACCTTACCTTTATTCAATTTAAAAAATTTCATGGATTTTCAGATGAAATATCATTTGTTGAGTATGTTATGCAAAAAGGACTTGTTTTAAAGACAGTGATTATTGCTGATATTTCCTTGGACCAAGGTATGAAGTACGACATTCTAAAAAGACTATCTAATGTGCCAAGAGCATCAGAAATGTGTCGACTTACATTTGACTGA
Protein sequence

>MS.gene021300.t1

MAESNSKRQKASEEKDDRISSLPDDVLNHILSYLPTKTIVSTGCLSRRWQHLWKHLHVVDFCEYDYPYQSANRIGRLASFAIFVNNVLLRNPRVVRKMRLTCAHSLINDNNLRARSVDSWVRVVIGPHLKELDLDLLPVFDDDDVDGPDFKLPLSLFTCPNLVSLRHILLIDIFGYVEVPMVNALLCGCPNIEVLDLNFLTNSTDNVCLPPTLKRLKIKIENEDGPSLEINAPNLEYLKIYQYTFSDVLNMKNLLNVVEASLDLYPLSYDFVVPLLKLLNNLSRTKHLVLSDSTTKWLLGEPRDLLFQEFCYLLHLDLTLPWFNSNSLLSLLHKCPILEVLKIRNEKEQSPILGWAPQPSAPKCLVSHLTFIQFKKFHGFSDEISFVEYVMQKGLVLKTVIIADISLDQGMKYDILKRLSNVPRASEMCRLTFD