Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene021896.t1 | XP_024626193.1 | 99.5 | 568 | 3 | 0 | 1 | 568 | 110 | 677 | 0.00E+00 | 1128.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene021896.t1 | Q9FNR3 | 42.7 | 555 | 300 | 3 | 2 | 556 | 89 | 625 | 1.6e-124 | 448.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene021896.t1 | A0A072TXQ3 | 99.5 | 568 | 3 | 0 | 1 | 568 | 110 | 677 | 0.0e+00 | 1128.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene79408 | MS.gene021896 | PPI |
| MS.gene021896 | MS.gene79406 | PPI |
| MS.gene021896 | MS.gene79407 | PPI |
| MS.gene021896 | MS.gene83829 | PPI |
| MS.gene021896 | MS.gene93502 | PPI |
| MS.gene83828 | MS.gene021896 | PPI |
| MS.gene28226 | MS.gene021896 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene021896.t1 | MTR_7g013770 | 99.472 | 568 | 3 | 0 | 1 | 568 | 110 | 677 | 0.0 | 1175 |
| MS.gene021896.t1 | MTR_3g025900 | 44.681 | 564 | 295 | 5 | 6 | 568 | 72 | 619 | 8.47e-163 | 478 |
| MS.gene021896.t1 | MTR_4g103540 | 44.587 | 545 | 269 | 11 | 41 | 568 | 162 | 690 | 6.99e-139 | 419 |
| MS.gene021896.t1 | MTR_8g021330 | 41.002 | 539 | 285 | 10 | 47 | 557 | 72 | 605 | 8.96e-123 | 375 |
| MS.gene021896.t1 | MTR_5g073450 | 34.705 | 559 | 338 | 9 | 9 | 558 | 94 | 634 | 2.11e-105 | 331 |
| MS.gene021896.t1 | MTR_3g031130 | 35.768 | 534 | 297 | 7 | 42 | 558 | 116 | 620 | 2.47e-97 | 309 |
| MS.gene021896.t1 | MTR_1g090620 | 31.725 | 539 | 313 | 8 | 45 | 557 | 132 | 641 | 7.20e-90 | 290 |
| MS.gene021896.t1 | MTR_1g057560 | 32.203 | 531 | 312 | 7 | 41 | 556 | 127 | 624 | 1.11e-89 | 289 |
| MS.gene021896.t1 | MTR_2g096230 | 32.369 | 553 | 333 | 10 | 8 | 557 | 67 | 581 | 1.04e-86 | 280 |
| MS.gene021896.t1 | MTR_7g026630 | 33.563 | 435 | 273 | 7 | 131 | 557 | 224 | 650 | 6.74e-86 | 280 |
| MS.gene021896.t1 | MTR_5g073460 | 35.669 | 471 | 284 | 8 | 97 | 560 | 237 | 695 | 6.34e-84 | 276 |
| MS.gene021896.t1 | MTR_6g033310 | 30.726 | 537 | 323 | 8 | 41 | 558 | 220 | 726 | 1.02e-83 | 276 |
| MS.gene021896.t1 | MTR_4g062330 | 29.908 | 545 | 362 | 9 | 9 | 551 | 72 | 598 | 1.79e-76 | 254 |
| MS.gene021896.t1 | MTR_1g067480 | 32.054 | 521 | 327 | 10 | 42 | 555 | 100 | 600 | 6.53e-76 | 252 |
| MS.gene021896.t1 | MTR_1g117090 | 29.912 | 565 | 349 | 12 | 41 | 568 | 123 | 677 | 1.39e-74 | 250 |
| MS.gene021896.t1 | MTR_1g067460 | 31.549 | 523 | 328 | 11 | 42 | 555 | 98 | 599 | 1.02e-68 | 233 |
| MS.gene021896.t1 | MTR_5g073620 | 30.481 | 374 | 214 | 5 | 106 | 463 | 266 | 609 | 2.49e-49 | 184 |
| MS.gene021896.t1 | MTR_5g073620 | 33.714 | 175 | 112 | 2 | 389 | 560 | 898 | 1071 | 1.75e-20 | 96.3 |
| MS.gene021896.t1 | MTR_5g074130 | 27.313 | 454 | 298 | 9 | 116 | 561 | 250 | 679 | 7.83e-43 | 164 |
| MS.gene021896.t1 | MTR_5g073480 | 26.398 | 447 | 241 | 11 | 106 | 546 | 256 | 620 | 5.73e-38 | 148 |
| MS.gene021896.t1 | MTR_4g008260 | 26.519 | 543 | 311 | 15 | 48 | 567 | 174 | 651 | 7.59e-36 | 142 |
| MS.gene021896.t1 | MTR_5g073920 | 26.027 | 438 | 280 | 9 | 131 | 559 | 259 | 661 | 8.58e-36 | 142 |
| MS.gene021896.t1 | MTR_3g464010 | 26.752 | 471 | 299 | 14 | 100 | 555 | 227 | 666 | 3.04e-33 | 135 |
| MS.gene021896.t1 | MTR_1g009620 | 24.837 | 459 | 306 | 9 | 123 | 563 | 228 | 665 | 9.90e-30 | 124 |
| MS.gene021896.t1 | MTR_1g017910 | 25.776 | 419 | 285 | 9 | 125 | 528 | 248 | 655 | 1.22e-29 | 124 |
| MS.gene021896.t1 | MTR_5g073900 | 25.945 | 397 | 231 | 11 | 138 | 529 | 4 | 342 | 2.81e-28 | 116 |
| MS.gene021896.t1 | MTR_5g073770 | 32.075 | 212 | 132 | 2 | 92 | 291 | 165 | 376 | 6.01e-26 | 110 |
| MS.gene021896.t1 | MTR_5g093530 | 25.876 | 371 | 223 | 8 | 191 | 555 | 246 | 570 | 1.10e-25 | 111 |
| MS.gene021896.t1 | MTR_5g073780 | 33.143 | 175 | 113 | 2 | 389 | 560 | 53 | 226 | 4.72e-21 | 92.4 |
| MS.gene021896.t1 | MTR_5g073490 | 32.335 | 167 | 92 | 3 | 395 | 556 | 3 | 153 | 1.25e-18 | 83.6 |
| MS.gene021896.t1 | MTR_0229s0040 | 28.141 | 199 | 127 | 4 | 379 | 563 | 24 | 220 | 1.24e-16 | 80.1 |
| MS.gene021896.t1 | MTR_5g073960 | 24.434 | 221 | 146 | 6 | 78 | 294 | 213 | 416 | 9.22e-14 | 73.9 |
| MS.gene021896.t1 | MTR_5g073820 | 23.864 | 264 | 138 | 5 | 87 | 317 | 152 | 385 | 2.43e-12 | 69.7 |
| MS.gene021896.t1 | MTR_2g041650 | 23.167 | 341 | 220 | 10 | 5 | 341 | 139 | 441 | 9.35e-11 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene021896.t1 | AT3G29400 | 50.775 | 581 | 266 | 8 | 1 | 568 | 85 | 658 | 0.0 | 548 |
| MS.gene021896.t1 | AT5G61010 | 42.883 | 555 | 299 | 4 | 2 | 556 | 89 | 625 | 1.03e-154 | 457 |
| MS.gene021896.t1 | AT5G61010 | 42.883 | 555 | 299 | 4 | 2 | 556 | 89 | 625 | 1.03e-154 | 457 |
| MS.gene021896.t1 | AT5G50380 | 42.256 | 594 | 288 | 12 | 3 | 568 | 116 | 682 | 2.32e-150 | 448 |
| MS.gene021896.t1 | AT3G14090 | 38.333 | 540 | 295 | 10 | 44 | 557 | 86 | 613 | 2.35e-119 | 366 |
| MS.gene021896.t1 | AT1G72470 | 36.717 | 591 | 315 | 13 | 7 | 557 | 50 | 621 | 2.11e-114 | 353 |
| MS.gene021896.t1 | AT1G54090 | 35.993 | 589 | 317 | 12 | 8 | 557 | 44 | 611 | 2.51e-111 | 345 |
| MS.gene021896.t1 | AT5G58430 | 32.456 | 570 | 340 | 10 | 2 | 558 | 82 | 619 | 2.95e-95 | 304 |
| MS.gene021896.t1 | AT5G03540 | 32.784 | 546 | 312 | 8 | 42 | 567 | 13 | 523 | 5.05e-92 | 292 |
| MS.gene021896.t1 | AT5G03540 | 32.419 | 583 | 336 | 10 | 6 | 567 | 93 | 638 | 1.36e-91 | 295 |
| MS.gene021896.t1 | AT5G03540 | 31.940 | 598 | 345 | 10 | 6 | 567 | 93 | 664 | 1.38e-89 | 290 |
| MS.gene021896.t1 | AT5G52340 | 30.783 | 562 | 348 | 8 | 6 | 557 | 93 | 623 | 5.09e-87 | 282 |
| MS.gene021896.t1 | AT1G07000 | 31.414 | 573 | 321 | 13 | 2 | 558 | 81 | 597 | 1.53e-86 | 280 |
| MS.gene021896.t1 | AT5G59730 | 32.737 | 559 | 350 | 11 | 9 | 559 | 60 | 600 | 1.35e-84 | 276 |
| MS.gene021896.t1 | AT5G59730 | 32.737 | 559 | 350 | 11 | 9 | 559 | 60 | 600 | 1.40e-84 | 276 |
| MS.gene021896.t1 | AT2G28640 | 30.577 | 520 | 328 | 6 | 42 | 560 | 94 | 581 | 4.64e-83 | 271 |
| MS.gene021896.t1 | AT1G07725 | 32.563 | 519 | 324 | 9 | 42 | 557 | 96 | 591 | 2.19e-82 | 270 |
| MS.gene021896.t1 | AT5G13150 | 31.690 | 568 | 356 | 14 | 5 | 558 | 96 | 645 | 4.07e-82 | 270 |
| MS.gene021896.t1 | AT2G39380 | 29.211 | 558 | 365 | 7 | 9 | 558 | 76 | 611 | 2.12e-78 | 259 |
| MS.gene021896.t1 | AT5G13990 | 30.847 | 590 | 329 | 15 | 2 | 558 | 139 | 682 | 6.56e-77 | 257 |
| MS.gene021896.t1 | AT3G09520 | 30.443 | 542 | 331 | 10 | 32 | 555 | 91 | 604 | 3.43e-71 | 240 |
| MS.gene021896.t1 | AT5G52350 | 30.684 | 453 | 284 | 4 | 112 | 557 | 148 | 577 | 3.68e-70 | 236 |
| MS.gene021896.t1 | AT3G09530 | 28.014 | 564 | 368 | 9 | 11 | 557 | 60 | 602 | 3.37e-66 | 227 |
| MS.gene021896.t1 | AT3G55150 | 27.907 | 559 | 373 | 7 | 8 | 558 | 75 | 611 | 9.55e-66 | 226 |
| MS.gene021896.t1 | AT2G28650 | 27.961 | 515 | 314 | 8 | 42 | 555 | 96 | 554 | 2.17e-60 | 210 |
| MS.gene021896.t1 | AT4G31540 | 25.056 | 443 | 303 | 7 | 123 | 555 | 231 | 654 | 1.23e-33 | 136 |
| MS.gene021896.t1 | AT1G51640 | 24.009 | 454 | 300 | 9 | 128 | 559 | 199 | 629 | 3.49e-23 | 104 |
Find 0 sgRNAs with CRISPR-Local
Find 118 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TGATTTAGAAAATTATCTTT+TGG | - | 51467:39741-39760 | MS.gene021896:CDS | 15.0% |
| !! | GATATGTTATGAATTATCTT+CGG | - | 51467:39077-39096 | MS.gene021896:CDS | 20.0% |
| ! | TATTGAAGATGTCTTGAAAA+TGG | - | 51467:38613-38632 | MS.gene021896:CDS | 25.0% |
| ! | TTAAAGTGATTCAAGCTTAT+AGG | - | 51467:39659-39678 | MS.gene021896:CDS | 25.0% |
| !! | AAAGATCAAAAGATGGATTT+GGG | - | 51467:38655-38674 | MS.gene021896:CDS | 25.0% |
| !! | TATCTTTTGGATTTCTTTGA+AGG | - | 51467:39754-39773 | MS.gene021896:CDS | 25.0% |
| AAGATGTCTTGAAAATGGAA+TGG | - | 51467:38618-38637 | MS.gene021896:CDS | 30.0% | |
| AAGCTTATACCATTGTTAGA+AGG | - | 51467:38543-38562 | MS.gene021896:CDS | 30.0% | |
| AATGAACAAACACTCATCTA+AGG | + | 51467:38573-38592 | MS.gene021896:intergenic | 30.0% | |
| AATGAACAACCTACATTACA+TGG | - | 51467:39339-39358 | MS.gene021896:CDS | 30.0% | |
| AGAATTCGTATCAATTTCTC+GGG | + | 51467:38848-38867 | MS.gene021896:intergenic | 30.0% | |
| AGATGTCTTGAAAATGGAAT+GGG | - | 51467:38619-38638 | MS.gene021896:CDS | 30.0% | |
| AGATTTGCGGATTTCTATAT+CGG | - | 51467:39636-39655 | MS.gene021896:CDS | 30.0% | |
| AGCTTATACCATTGTTAGAA+GGG | - | 51467:38544-38563 | MS.gene021896:CDS | 30.0% | |
| AGTTGTTGCAAAATCCTATT+AGG | - | 51467:39785-39804 | MS.gene021896:CDS | 30.0% | |
| ATCCTTAAGAAAGTTGAGAA+TGG | + | 51467:39479-39498 | MS.gene021896:intergenic | 30.0% | |
| GAGAATTCGTATCAATTTCT+CGG | + | 51467:38849-38868 | MS.gene021896:intergenic | 30.0% | |
| GTGTTTGTTCATTCTTGAAA+TGG | - | 51467:38580-38599 | MS.gene021896:CDS | 30.0% | |
| TCTGAACTTAGGATCATATT+CGG | - | 51467:39379-39398 | MS.gene021896:CDS | 30.0% | |
| TGACATCAATGCTTTGTATT+CGG | - | 51467:38901-38920 | MS.gene021896:CDS | 30.0% | |
| TGGTTTCAAAGATCAAAAGA+TGG | - | 51467:38648-38667 | MS.gene021896:CDS | 30.0% | |
| TGTCTCAAAAACTCTTCTAA+AGG | - | 51467:39528-39547 | MS.gene021896:CDS | 30.0% | |
| TGTTCATTCTTGAAATGGAA+AGG | - | 51467:38585-38604 | MS.gene021896:CDS | 30.0% | |
| TTCCATTCTCAACTTTCTTA+AGG | - | 51467:39474-39493 | MS.gene021896:CDS | 30.0% | |
| ! | AGAGTATAAGTTTTTGCAGA+GGG | - | 51467:38217-38236 | MS.gene021896:CDS | 30.0% |
| ! | ATTTTGCAGCTTCTGAATTT+TGG | - | 51467:38794-38813 | MS.gene021896:CDS | 30.0% |
| ! | CAAAGATCAAAAGATGGATT+TGG | - | 51467:38654-38673 | MS.gene021896:CDS | 30.0% |
| !! | AAGAGTATAAGTTTTTGCAG+AGG | - | 51467:38216-38235 | MS.gene021896:CDS | 30.0% |
| !! | GGCTTTGAAAATCTTTGTTA+GGG | - | 51467:38676-38695 | MS.gene021896:CDS | 30.0% |
| !! | TGTCATTGATTTAGTTCATC+CGG | - | 51467:38451-38470 | MS.gene021896:CDS | 30.0% |
| !!! | TTTTGGTGATGATTCATTTG+AGG | - | 51467:38385-38404 | MS.gene021896:CDS | 30.0% |
| AAATACTCAGACGTTTCTTC+AGG | + | 51467:38128-38147 | MS.gene021895:intergenic | 35.0% | |
| ACAAAACAAGCTTGACTAAC+AGG | + | 51467:38755-38774 | MS.gene021896:intergenic | 35.0% | |
| ACATGGCTGAAAAGGTTAAA+GGG | - | 51467:39356-39375 | MS.gene021896:CDS | 35.0% | |
| ATATTGATCGAGAAGTTGGA+AGG | - | 51467:38170-38189 | MS.gene021896:CDS | 35.0% | |
| CAAGCTTATAGGACATTTGT+TGG | - | 51467:39670-39689 | MS.gene021896:CDS | 35.0% | |
| CTCAACTTTCTTAAGGATGA+AGG | - | 51467:39481-39500 | MS.gene021896:CDS | 35.0% | |
| GATGTCTTGAAAATGGAATG+GGG | - | 51467:38620-38639 | MS.gene021896:CDS | 35.0% | |
| TACATGGCTGAAAAGGTTAA+AGG | - | 51467:39355-39374 | MS.gene021896:CDS | 35.0% | |
| TCTGAAAGATCAAGAAGAAG+AGG | - | 51467:39135-39154 | MS.gene021896:CDS | 35.0% | |
| TTCATAACATATCTCGCCAA+TGG | + | 51467:39070-39089 | MS.gene021896:intergenic | 35.0% | |
| TTGGCTTCTGTTATCATCTT+CGG | + | 51467:39197-39216 | MS.gene021896:intergenic | 35.0% | |
| TTTACAGGATTCAAACAGCT+TGG | - | 51467:39587-39606 | MS.gene021896:CDS | 35.0% | |
| TTTATCTTGCAAGTGAAAGG+TGG | - | 51467:38699-38718 | MS.gene021896:CDS | 35.0% | |
| TTTGGTGAAGCTATGTCTAT+TGG | - | 51467:38812-38831 | MS.gene021896:CDS | 35.0% | |
| ! | CTTATAGGACATTTGTTGGA+AGG | - | 51467:39674-39693 | MS.gene021896:CDS | 35.0% |
| ! | GAAACTTCCAGTTGTGTTTT+CGG | + | 51467:39417-39436 | MS.gene021896:intergenic | 35.0% |
| ! | GGGAATTCTTTTGTCTCTTT+TGG | - | 51467:38368-38387 | MS.gene021896:CDS | 35.0% |
| ! | TGGCTTAGTGACCAAATTTT+CGG | - | 51467:38719-38738 | MS.gene021896:CDS | 35.0% |
| ! | TTTGAGACAGAATTTGAACC+AGG | + | 51467:39517-39536 | MS.gene021896:intergenic | 35.0% |
| !! | GAATACAAAGCATTGATGTC+AGG | + | 51467:38902-38921 | MS.gene021896:intergenic | 35.0% |
| !! | GGGCTTTGAAAATCTTTGTT+AGG | - | 51467:38675-38694 | MS.gene021896:CDS | 35.0% |
| AAGTTACGAAGCTTCTACCT+CGG | - | 51467:39553-39572 | MS.gene021896:CDS | 40.0% | |
| AATGGATCCGAAAACACAAC+TGG | - | 51467:39407-39426 | MS.gene021896:CDS | 40.0% | |
| AGGTTAAAGGGTCTGAACTT+AGG | - | 51467:39368-39387 | MS.gene021896:CDS | 40.0% | |
| ATCAATGACATGCTCTTCAG+TGG | + | 51467:38441-38460 | MS.gene021896:intergenic | 40.0% | |
| ATTCAGTGCTTCGCTGTAAT+CGG | + | 51467:39110-39129 | MS.gene021896:intergenic | 40.0% | |
| CCAAGACTGAAGCAAATGAT+AGG | + | 51467:39258-39277 | MS.gene021896:intergenic | 40.0% | |
| CCTACATTACATGGCTGAAA+AGG | - | 51467:39348-39367 | MS.gene021896:CDS | 40.0% | |
| CCTATCATTTGCTTCAGTCT+TGG | - | 51467:39255-39274 | MS.gene021896:CDS | 40.0% | |
| GAGACATACTCAGGTTCAAA+AGG | + | 51467:38317-38336 | MS.gene021896:intergenic | 40.0% | |
| GGCTTATAGTGTTCTTCAGA+CGG | - | 51467:38238-38257 | MS.gene021896:CDS | 40.0% | |
| GGGTTTATCTTGCAAGTGAA+AGG | - | 51467:38696-38715 | MS.gene021896:CDS | 40.0% | |
| GTTCAAAAGGTTGCCTATTC+TGG | + | 51467:38304-38323 | MS.gene021896:intergenic | 40.0% | |
| TGAAATACGAGAGAGCTAGT+TGG | - | 51467:39449-39468 | MS.gene021896:CDS | 40.0% | |
| TTCGTATCAATTTCTCGGGT+TGG | + | 51467:38844-38863 | MS.gene021896:intergenic | 40.0% | |
| ! | AGTGACCAAATTTTCGGAGA+AGG | - | 51467:38725-38744 | MS.gene021896:CDS | 40.0% |
| ! | CCTTTTCAGCCATGTAATGT+AGG | + | 51467:39351-39370 | MS.gene021896:intergenic | 40.0% |
| ! | GAAAATGGAATGGGGTACTT+TGG | - | 51467:38628-38647 | MS.gene021896:CDS | 40.0% |
| ! | TAAGGCATCCCTTCTAACAA+TGG | + | 51467:38555-38574 | MS.gene021896:intergenic | 40.0% |
| AGCGAGGAAGATGTTGTTGA+TGG | - | 51467:38347-38366 | MS.gene021896:CDS | 45.0% | |
| AGTCTTGGAGAACAATCTCG+AGG | - | 51467:39270-39289 | MS.gene021896:CDS | 45.0% | |
| CAATGCTTTGTATTCGGACG+AGG | - | 51467:38907-38926 | MS.gene021896:CDS | 45.0% | |
| CTGTTATCATCTTCGGTACC+CGG | + | 51467:39190-39209 | MS.gene021896:intergenic | 45.0% | |
| GAAATCTACCAGGAGATGCT+TGG | + | 51467:39216-39235 | MS.gene021896:intergenic | 45.0% | |
| GATCGAAACGAGACATACTC+AGG | + | 51467:38326-38345 | MS.gene021896:intergenic | 45.0% | |
| GCAACCTGCTTATCCAGAAT+AGG | - | 51467:38288-38307 | MS.gene021896:CDS | 45.0% | |
| GCGAGGAAGATGTTGTTGAT+GGG | - | 51467:38348-38367 | MS.gene021896:CDS | 45.0% | |
| GCGCATATTGATCGAGAAGT+TGG | - | 51467:38166-38185 | MS.gene021896:CDS | 45.0% | |
| GGATCATATTCGGAGACGAA+TGG | - | 51467:39389-39408 | MS.gene021896:CDS | 45.0% | |
| GTTCGCCTTCTCCGAAAATT+TGG | + | 51467:38733-38752 | MS.gene021896:intergenic | 45.0% | |
| GTTGCCTATTCTGGATAAGC+AGG | + | 51467:38295-38314 | MS.gene021896:intergenic | 45.0% | |
| TCAACAACGCCTTTAGTTGG+TGG | - | 51467:39034-39053 | MS.gene021896:CDS | 45.0% | |
| TCCTGGTAGATTTCCCTCAA+TGG | - | 51467:39222-39241 | MS.gene021896:CDS | 45.0% | |
| TCGGCTTCGAGGATATTTAC+AGG | - | 51467:39572-39591 | MS.gene021896:CDS | 45.0% | |
| TGTAAATATCCTCGAAGCCG+AGG | + | 51467:39573-39592 | MS.gene021896:intergenic | 45.0% | |
| TGTATCCCTCCACCAACTAA+AGG | + | 51467:39046-39065 | MS.gene021896:intergenic | 45.0% | |
| TTCAGCTTCGCGAAGATTTG+CGG | - | 51467:39623-39642 | MS.gene021896:CDS | 45.0% | |
| TTCTTCAGACGGCTATGACA+CGG | - | 51467:38249-38268 | MS.gene021896:CDS | 45.0% | |
| TTTGCGATACACCTGAGATC+AGG | + | 51467:38485-38504 | MS.gene021896:intergenic | 45.0% | |
| !! | ATCAATTTCTCGGGTTGGTG+AGG | + | 51467:38839-38858 | MS.gene021896:intergenic | 45.0% |
| !! | CACGAGGTTCTGAACAGATT+GGG | - | 51467:38956-38975 | MS.gene021896:CDS | 45.0% |
| !! | CCAACTAAAGGCGTTGTTGA+CGG | + | 51467:39034-39053 | MS.gene021896:intergenic | 45.0% |
| AACAGAAGCCAAGCATCTCC+TGG | - | 51467:39205-39224 | MS.gene021896:CDS | 50.0% | |
| CCAATCTGTTCAGAACCTCG+TGG | + | 51467:38958-38977 | MS.gene021896:intergenic | 50.0% | |
| CCGTCAACAACGCCTTTAGT+TGG | - | 51467:39031-39050 | MS.gene021896:CDS | 50.0% | |
| CGTGTCAGGTGACGATGAAA+TGG | + | 51467:39164-39183 | MS.gene021896:intergenic | 50.0% | |
| CTGAGATCAGGAATCACAGC+CGG | + | 51467:38473-38492 | MS.gene021896:intergenic | 50.0% | |
| GATGAAGGAATTCACGCTCC+TGG | - | 51467:39496-39515 | MS.gene021896:CDS | 50.0% | |
| GCCATTGAGGGAAATCTACC+AGG | + | 51467:39226-39245 | MS.gene021896:intergenic | 50.0% | |
| GCTTTGTATTCGGACGAGGT+TGG | - | 51467:38911-38930 | MS.gene021896:CDS | 50.0% | |
| GGTTCACTTTGAATGCCACG+AGG | - | 51467:38940-38959 | MS.gene021896:CDS | 50.0% | |
| GTAGATTTCCCTCAATGGCG+CGG | - | 51467:39227-39246 | MS.gene021896:CDS | 50.0% | |
| GTGGCATTCAAAGTGAACCG+AGG | + | 51467:38939-38958 | MS.gene021896:intergenic | 50.0% | |
| TCTTCGCGAAGCTGAACATC+TGG | + | 51467:39619-39638 | MS.gene021896:intergenic | 50.0% | |
| TGGTGGAGGGATACATCCAT+TGG | - | 51467:39051-39070 | MS.gene021896:CDS | 50.0% | |
| !! | ACAACGCCTTTAGTTGGTGG+AGG | - | 51467:39037-39056 | MS.gene021896:CDS | 50.0% |
| !! | CAACGCCTTTAGTTGGTGGA+GGG | - | 51467:39038-39057 | MS.gene021896:CDS | 50.0% |
| !! | CCACGAGGTTCTGAACAGAT+TGG | - | 51467:38955-38974 | MS.gene021896:CDS | 50.0% |
| AAGCTTCTACCTCGGCTTCG+AGG | - | 51467:39561-39580 | MS.gene021896:CDS | 55.0% | |
| AGGAATTGCCGCGCCATTGA+GGG | + | 51467:39238-39257 | MS.gene021896:intergenic | 55.0% | |
| ATCGTCACCTGACACGAGTC+CGG | - | 51467:39168-39187 | MS.gene021896:CDS | 55.0% | |
| CGGCTGTGATTCCTGATCTC+AGG | - | 51467:38471-38490 | MS.gene021896:CDS | 55.0% | |
| TAGGAATTGCCGCGCCATTG+AGG | + | 51467:39239-39258 | MS.gene021896:intergenic | 55.0% | |
| TGTCTCGTTTCGATCGAGCG+AGG | - | 51467:38331-38350 | MS.gene021896:CDS | 55.0% | |
| ! | TTCGGACGAGGTTGGTTCCT+CGG | - | 51467:38919-38938 | MS.gene021896:CDS | 55.0% |
| TCGTCACCTGACACGAGTCC+GGG | - | 51467:39169-39188 | MS.gene021896:CDS | 60.0% | |
| TCGGTACCCGGACTCGTGTC+AGG | + | 51467:39178-39197 | MS.gene021896:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| 51467 | gene | 38107 | 39813 | 38107 | ID=MS.gene021896 |
| 51467 | mRNA | 38107 | 39813 | 38107 | ID=MS.gene021896.t1;Parent=MS.gene021896 |
| 51467 | exon | 38107 | 39813 | 38107 | ID=MS.gene021896.t1.exon1;Parent=MS.gene021896.t1 |
| 51467 | CDS | 38107 | 39813 | 38107 | ID=cds.MS.gene021896.t1;Parent=MS.gene021896.t1 |
| Gene Sequence |
| Protein sequence |
