Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene022048.t1 | XP_013447714.1 | 85.4 | 403 | 50 | 4 | 1 | 401 | 1 | 396 | 1.60E-114 | 422.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene022048.t1 | Q96502 | 49.2 | 400 | 125 | 8 | 19 | 401 | 9 | 347 | 1.7e-51 | 204.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene022048.t1 | A0A072TWC7 | 85.4 | 403 | 50 | 4 | 1 | 401 | 1 | 396 | 1.2e-114 | 422.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene022048.t1 | TF | C2C2-CO-like |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene57909 | MS.gene022048 | PPI |
| MS.gene022048 | MS.gene62915 | PPI |
| MS.gene022048 | MS.gene75965 | PPI |
| MS.gene44781 | MS.gene022048 | PPI |
| MS.gene012430 | MS.gene022048 | PPI |
| MS.gene018362 | MS.gene022048 | PPI |
| MS.gene035678 | MS.gene022048 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene022048.t1 | MTR_7g018170 | 91.811 | 403 | 24 | 4 | 1 | 401 | 1 | 396 | 0.0 | 629 |
| MS.gene022048.t1 | MTR_4g128930 | 38.350 | 412 | 164 | 14 | 24 | 401 | 20 | 375 | 6.67e-75 | 238 |
| MS.gene022048.t1 | MTR_1g013450 | 37.275 | 389 | 155 | 12 | 24 | 400 | 4 | 315 | 2.57e-68 | 219 |
| MS.gene022048.t1 | MTR_3g105710 | 37.209 | 387 | 134 | 11 | 23 | 400 | 3 | 289 | 5.20e-65 | 209 |
| MS.gene022048.t1 | MTR_7g083540 | 27.577 | 388 | 237 | 13 | 26 | 376 | 5 | 385 | 6.27e-22 | 97.1 |
| MS.gene022048.t1 | MTR_4g067320 | 43.478 | 92 | 43 | 1 | 26 | 108 | 5 | 96 | 2.03e-18 | 84.3 |
| MS.gene022048.t1 | MTR_4g067320 | 39.474 | 76 | 40 | 1 | 69 | 138 | 5 | 80 | 4.50e-11 | 63.2 |
| MS.gene022048.t1 | MTR_4g067320 | 43.478 | 92 | 43 | 1 | 26 | 108 | 5 | 96 | 2.26e-18 | 84.0 |
| MS.gene022048.t1 | MTR_4g067320 | 39.474 | 76 | 40 | 1 | 69 | 138 | 5 | 80 | 4.66e-11 | 62.8 |
| MS.gene022048.t1 | MTR_1g023260 | 41.935 | 93 | 44 | 1 | 26 | 108 | 5 | 97 | 8.61e-18 | 83.2 |
| MS.gene022048.t1 | MTR_5g021580 | 48.750 | 80 | 33 | 1 | 26 | 97 | 5 | 84 | 8.96e-18 | 81.3 |
| MS.gene022048.t1 | MTR_5g021580 | 48.750 | 80 | 33 | 1 | 26 | 97 | 5 | 84 | 9.42e-18 | 81.3 |
| MS.gene022048.t1 | MTR_1g023260 | 41.935 | 93 | 44 | 1 | 26 | 108 | 5 | 97 | 1.19e-17 | 80.9 |
| MS.gene022048.t1 | MTR_5g069480 | 42.857 | 91 | 52 | 0 | 26 | 116 | 5 | 95 | 2.86e-17 | 82.0 |
| MS.gene022048.t1 | MTR_5g069480 | 42.857 | 91 | 52 | 0 | 26 | 116 | 5 | 95 | 3.33e-17 | 83.2 |
| MS.gene022048.t1 | MTR_2g073370 | 43.478 | 92 | 43 | 1 | 26 | 108 | 5 | 96 | 4.06e-17 | 81.6 |
| MS.gene022048.t1 | MTR_7g108150 | 35.088 | 114 | 66 | 3 | 23 | 132 | 17 | 126 | 7.05e-17 | 82.0 |
| MS.gene022048.t1 | MTR_2g099010 | 40.217 | 92 | 46 | 1 | 26 | 108 | 5 | 96 | 2.04e-16 | 78.6 |
| MS.gene022048.t1 | MTR_2g099010 | 50.000 | 50 | 25 | 0 | 69 | 118 | 5 | 54 | 8.33e-11 | 62.4 |
| MS.gene022048.t1 | MTR_2g099010 | 40.217 | 92 | 46 | 1 | 26 | 108 | 5 | 96 | 2.05e-16 | 78.6 |
| MS.gene022048.t1 | MTR_2g099010 | 50.000 | 50 | 25 | 0 | 69 | 118 | 5 | 54 | 8.19e-11 | 62.4 |
| MS.gene022048.t1 | MTR_3g113070 | 33.333 | 111 | 63 | 1 | 26 | 125 | 5 | 115 | 3.83e-15 | 74.7 |
| MS.gene022048.t1 | MTR_4g071200 | 38.710 | 93 | 47 | 1 | 26 | 108 | 5 | 97 | 1.87e-14 | 72.4 |
| MS.gene022048.t1 | MTR_3g082630 | 41.758 | 91 | 52 | 1 | 26 | 116 | 5 | 94 | 3.38e-14 | 73.9 |
| MS.gene022048.t1 | MTR_3g117320 | 36.559 | 93 | 49 | 1 | 26 | 108 | 5 | 97 | 2.22e-13 | 69.7 |
| MS.gene022048.t1 | MTR_8g104190 | 32.275 | 189 | 92 | 5 | 204 | 375 | 232 | 401 | 3.93e-12 | 67.8 |
| MS.gene022048.t1 | MTR_1g109350 | 37.838 | 74 | 46 | 0 | 24 | 97 | 3 | 76 | 1.75e-11 | 65.5 |
| MS.gene022048.t1 | MTR_2g088900 | 35.165 | 91 | 59 | 0 | 16 | 106 | 91 | 181 | 3.38e-11 | 65.1 |
| MS.gene022048.t1 | MTR_1g110870 | 69.767 | 43 | 13 | 0 | 332 | 374 | 382 | 424 | 4.60e-11 | 64.7 |
| MS.gene022048.t1 | MTR_3g034680 | 47.368 | 57 | 25 | 1 | 58 | 114 | 4 | 55 | 5.41e-11 | 59.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene022048.t1 | AT3G02380 | 53.500 | 400 | 108 | 11 | 19 | 401 | 9 | 347 | 8.80e-124 | 362 |
| MS.gene022048.t1 | AT5G15840 | 50.505 | 396 | 140 | 13 | 23 | 401 | 17 | 373 | 5.32e-110 | 328 |
| MS.gene022048.t1 | AT5G15850 | 50.124 | 403 | 135 | 9 | 16 | 401 | 2 | 355 | 1.65e-107 | 321 |
| MS.gene022048.t1 | AT5G24930 | 40.201 | 398 | 181 | 10 | 23 | 401 | 3 | 362 | 6.43e-73 | 232 |
| MS.gene022048.t1 | AT5G57660 | 41.919 | 396 | 154 | 15 | 23 | 401 | 19 | 355 | 4.60e-72 | 230 |
| MS.gene022048.t1 | AT2G24790 | 39.178 | 365 | 121 | 13 | 20 | 376 | 2 | 273 | 1.74e-66 | 213 |
| MS.gene022048.t1 | AT5G15840 | 47.312 | 279 | 101 | 9 | 23 | 292 | 17 | 258 | 7.94e-63 | 203 |
| MS.gene022048.t1 | AT2G24790 | 42.857 | 182 | 78 | 5 | 20 | 198 | 2 | 160 | 6.17e-41 | 144 |
| MS.gene022048.t1 | AT5G48250 | 28.686 | 373 | 221 | 14 | 26 | 373 | 5 | 357 | 4.64e-24 | 102 |
| MS.gene022048.t1 | AT1G78600 | 44.565 | 92 | 42 | 1 | 26 | 108 | 5 | 96 | 2.14e-18 | 85.5 |
| MS.gene022048.t1 | AT1G78600 | 44.565 | 92 | 42 | 1 | 26 | 108 | 5 | 96 | 2.20e-18 | 85.9 |
| MS.gene022048.t1 | AT1G06040 | 43.478 | 92 | 43 | 1 | 26 | 108 | 5 | 96 | 3.35e-17 | 80.9 |
| MS.gene022048.t1 | AT2G21320 | 47.500 | 80 | 34 | 1 | 26 | 97 | 5 | 84 | 5.27e-17 | 78.6 |
| MS.gene022048.t1 | AT2G47890 | 34.211 | 114 | 73 | 1 | 24 | 137 | 11 | 122 | 8.01e-17 | 80.9 |
| MS.gene022048.t1 | AT1G06040 | 43.478 | 92 | 43 | 1 | 26 | 108 | 5 | 96 | 1.01e-16 | 78.2 |
| MS.gene022048.t1 | AT2G47890 | 38.710 | 93 | 55 | 1 | 24 | 116 | 11 | 101 | 1.34e-16 | 80.9 |
| MS.gene022048.t1 | AT2G47890 | 38.710 | 93 | 55 | 1 | 24 | 116 | 11 | 101 | 1.39e-16 | 79.0 |
| MS.gene022048.t1 | AT4G38960 | 45.000 | 80 | 36 | 1 | 26 | 97 | 5 | 84 | 1.46e-16 | 77.8 |
| MS.gene022048.t1 | AT4G38960 | 45.000 | 80 | 36 | 1 | 26 | 97 | 5 | 84 | 1.46e-16 | 77.8 |
| MS.gene022048.t1 | AT2G33500 | 34.127 | 126 | 75 | 2 | 25 | 150 | 11 | 128 | 4.33e-16 | 79.7 |
| MS.gene022048.t1 | AT2G33500 | 63.043 | 46 | 17 | 0 | 331 | 376 | 356 | 401 | 1.42e-11 | 66.2 |
| MS.gene022048.t1 | AT2G33500 | 34.127 | 126 | 75 | 2 | 25 | 150 | 11 | 128 | 5.42e-16 | 79.7 |
| MS.gene022048.t1 | AT2G33500 | 63.043 | 46 | 17 | 0 | 331 | 376 | 355 | 400 | 1.47e-11 | 65.9 |
| MS.gene022048.t1 | AT2G31380 | 40.217 | 92 | 46 | 1 | 26 | 108 | 5 | 96 | 8.23e-16 | 77.0 |
| MS.gene022048.t1 | AT1G75540 | 37.895 | 95 | 47 | 1 | 26 | 108 | 5 | 99 | 1.21e-15 | 77.8 |
| MS.gene022048.t1 | AT1G28050 | 35.922 | 103 | 63 | 1 | 26 | 128 | 9 | 108 | 1.61e-14 | 75.1 |
| MS.gene022048.t1 | AT1G73870 | 68.085 | 47 | 15 | 0 | 331 | 377 | 344 | 390 | 9.28e-13 | 69.7 |
| MS.gene022048.t1 | AT3G07650 | 43.056 | 72 | 41 | 0 | 26 | 97 | 5 | 76 | 1.21e-12 | 69.3 |
| MS.gene022048.t1 | AT3G07650 | 43.056 | 72 | 41 | 0 | 26 | 97 | 5 | 76 | 1.21e-12 | 69.3 |
| MS.gene022048.t1 | AT3G07650 | 43.056 | 72 | 41 | 0 | 26 | 97 | 5 | 76 | 1.21e-12 | 69.3 |
| MS.gene022048.t1 | AT3G07650 | 43.056 | 72 | 41 | 0 | 26 | 97 | 5 | 76 | 1.21e-12 | 69.3 |
| MS.gene022048.t1 | AT1G68190 | 34.000 | 100 | 61 | 2 | 24 | 123 | 41 | 135 | 1.24e-12 | 69.3 |
| MS.gene022048.t1 | AT1G68190 | 34.000 | 100 | 61 | 2 | 24 | 123 | 12 | 106 | 1.61e-12 | 68.6 |
| MS.gene022048.t1 | AT1G68190 | 34.000 | 100 | 61 | 2 | 24 | 123 | 12 | 106 | 1.61e-12 | 68.6 |
| MS.gene022048.t1 | AT1G25440 | 34.722 | 144 | 56 | 4 | 251 | 374 | 278 | 403 | 3.45e-12 | 68.2 |
| MS.gene022048.t1 | AT4G15250 | 35.714 | 84 | 54 | 0 | 26 | 109 | 5 | 88 | 3.67e-12 | 67.4 |
| MS.gene022048.t1 | AT4G10240 | 34.694 | 98 | 45 | 2 | 26 | 108 | 5 | 98 | 6.14e-12 | 63.9 |
| MS.gene022048.t1 | AT1G68520 | 65.217 | 46 | 16 | 0 | 332 | 377 | 357 | 402 | 1.34e-11 | 66.2 |
| MS.gene022048.t1 | AT3G21880 | 35.165 | 91 | 57 | 1 | 26 | 116 | 5 | 93 | 2.17e-11 | 65.5 |
| MS.gene022048.t1 | AT3G21880 | 35.165 | 91 | 57 | 1 | 26 | 116 | 9 | 97 | 2.29e-11 | 65.1 |
| MS.gene022048.t1 | AT3G21880 | 35.165 | 91 | 57 | 1 | 26 | 116 | 9 | 97 | 2.29e-11 | 65.1 |
| MS.gene022048.t1 | AT4G39070 | 36.559 | 93 | 49 | 1 | 26 | 108 | 5 | 97 | 4.70e-11 | 63.2 |
| MS.gene022048.t1 | AT5G14370 | 47.619 | 63 | 33 | 0 | 314 | 376 | 276 | 338 | 5.93e-11 | 63.9 |
Find 106 sgRNAs with CRISPR-Local
Find 200 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTCCCGATTCTTCCAATTTC+GGG | 0.189546 | 7.1:+78680678 | MS.gene022048:CDS |
| CTCATCATGATGAGTATTAT+TGG | 0.214592 | 7.1:-78681024 | None:intergenic |
| CTTCATCTTCGGCACCTAAA+AGG | 0.221370 | 7.1:-78680725 | None:intergenic |
| TGGAGAAGTTGATGAGTATT+TGG | 0.234428 | 7.1:+78680953 | MS.gene022048:CDS |
| AATAGGTCAATTGTTCCTTT+TGG | 0.257022 | 7.1:-78682856 | None:intergenic |
| TGTCCCGATTCTTCCAATTT+CGG | 0.284602 | 7.1:+78680677 | MS.gene022048:CDS |
| CCTCGAGGCACGAACGCGTC+TGG | 0.290131 | 7.1:+78680532 | MS.gene022048:CDS |
| GAAACTCGGCCGCGTATAAA+AGG | 0.298232 | 7.1:+78683015 | MS.gene022048:CDS |
| CCACGTTGCCGCAGACCTTA+TGG | 0.314996 | 7.1:-78680397 | None:intergenic |
| TTGTTATTGATGTTCTTTAG+AGG | 0.325161 | 7.1:-78680861 | None:intergenic |
| CCAATTTCGGGTTACCTATA+CGG | 0.340122 | 7.1:+78680690 | MS.gene022048:CDS |
| ATGAAAATGAAGCTGCTTCA+TGG | 0.340820 | 7.1:+78680826 | MS.gene022048:CDS |
| CTCTATCCATTGGAGAGAAA+TGG | 0.342666 | 7.1:-78682906 | None:intergenic |
| GAAAATTTGAGAAAACAATT+AGG | 0.345101 | 7.1:+78682968 | MS.gene022048:CDS |
| AGCCGCCGGGGCACGCTCGC+AGG | 0.350184 | 7.1:-78680565 | None:intergenic |
| GGCTTTGTCGGCGGTGGTTG+TGG | 0.350451 | 7.1:+78680747 | MS.gene022048:CDS |
| CATAATCAAGAGGGTAATAA+TGG | 0.353323 | 7.1:+78680918 | MS.gene022048:CDS |
| TTTAACATCATTTCAGAAAG+AGG | 0.365033 | 7.1:-78683127 | None:intergenic |
| CAACAACAACAAGATCATTA+TGG | 0.365626 | 7.1:+78681059 | MS.gene022048:CDS |
| CTAATTACAGAAGTTGGATA+TGG | 0.366492 | 7.1:+78683096 | MS.gene022048:CDS |
| CCGTATAGGTAACCCGAAAT+TGG | 0.367447 | 7.1:-78680690 | None:intergenic |
| TGGGAAGACATTTGAATAGA+AGG | 0.383605 | 7.1:-78682886 | None:intergenic |
| AGTGGACAAGTCACTTGTTC+AGG | 0.385352 | 7.1:+78682455 | MS.gene022048:CDS |
| GTCGGCGGTGGTTGTGGTGG+TGG | 0.399578 | 7.1:+78680753 | MS.gene022048:CDS |
| GAATAGAAGGACCTGAAAAT+AGG | 0.406008 | 7.1:-78682873 | None:intergenic |
| TGGTTGTGAGGTGGAGGAAG+AGG | 0.415419 | 7.1:+78680773 | MS.gene022048:CDS |
| TGGTGGTGGTTGTGAGGTGG+AGG | 0.415856 | 7.1:+78680767 | MS.gene022048:CDS |
| TAACCCGAAATTGGAAGAAT+CGG | 0.422897 | 7.1:-78680681 | None:intergenic |
| GAGTTTGAGTCTTCCAAAGC+TGG | 0.426808 | 7.1:+78681161 | MS.gene022048:CDS |
| GGTGGCTGTGGCTGAGGTGG+TGG | 0.428121 | 7.1:-78680376 | None:intergenic |
| GAAGAATCGGGACACGTTGA+TGG | 0.431550 | 7.1:-78680668 | None:intergenic |
| CCTTATGGTGGCTGTGGCTG+AGG | 0.436720 | 7.1:-78680382 | None:intergenic |
| ATTGTAACTGAATCCAGCTT+TGG | 0.441148 | 7.1:-78681174 | None:intergenic |
| TGTACCTGCTGTTGTTGAAC+AGG | 0.442029 | 7.1:-78681119 | None:intergenic |
| TGAAGGTGTTGATCATGATA+TGG | 0.443702 | 7.1:+78680800 | MS.gene022048:CDS |
| GATGAAGGCTTTGTCGGCGG+TGG | 0.445280 | 7.1:+78680741 | MS.gene022048:CDS |
| TCTATCCATTGGAGAGAAAT+GGG | 0.447374 | 7.1:-78682905 | None:intergenic |
| GTCTTCCCATTTCTCTCCAA+TGG | 0.450964 | 7.1:+78682900 | MS.gene022048:CDS |
| ACATCACTAATTACAGAAGT+TGG | 0.453991 | 7.1:+78683090 | MS.gene022048:CDS |
| CGCGGCAGAAAACCGCGCAT+GGG | 0.457653 | 7.1:-78680449 | None:intergenic |
| TTCATCTTCGGCACCTAAAA+GGG | 0.458034 | 7.1:-78680724 | None:intergenic |
| GGCCTGCGAGCGTGCCCCGG+CGG | 0.459298 | 7.1:+78680563 | MS.gene022048:CDS |
| GCCGACAAAGCCTTCATCTT+CGG | 0.465052 | 7.1:-78680736 | None:intergenic |
| TGAGGCCTGCGAGCGTGCCC+CGG | 0.465827 | 7.1:+78680560 | MS.gene022048:CDS |
| TTGTGGTGGTGGTTGTGAGG+TGG | 0.465870 | 7.1:+78680764 | MS.gene022048:CDS |
| CTCGAGGCACGAACGCGTCT+GGG | 0.468750 | 7.1:+78680533 | MS.gene022048:CDS |
| ACTCAGAGTTTACTGATAAG+TGG | 0.476306 | 7.1:+78682437 | MS.gene022048:intron |
| GCCGAAGATGAAGGCTTTGT+CGG | 0.477058 | 7.1:+78680735 | MS.gene022048:CDS |
| ACTCTTGCTTCTCTATCCAT+TGG | 0.478486 | 7.1:-78682916 | None:intergenic |
| GTGGAGGAAGAGGAGGATGA+AGG | 0.479258 | 7.1:+78680783 | MS.gene022048:CDS |
| TGGAGGTCTTGAATAGGTCA+TGG | 0.494897 | 7.1:-78682836 | None:intergenic |
| CGCAGACCTTATGGTGGCTG+TGG | 0.501654 | 7.1:-78680388 | None:intergenic |
| AAACAATTAGGTATGCTTCA+AGG | 0.513566 | 7.1:+78682980 | MS.gene022048:CDS |
| CCTCAGCCACAGCCACCATA+AGG | 0.513892 | 7.1:+78680382 | MS.gene022048:CDS |
| AACCCGAAATTGGAAGAATC+GGG | 0.527364 | 7.1:-78680680 | None:intergenic |
| TGGTTGTGGTGGTGGTTGTG+AGG | 0.528945 | 7.1:+78680761 | MS.gene022048:CDS |
| TTAACATCATTTCAGAAAGA+GGG | 0.529345 | 7.1:-78683126 | None:intergenic |
| GGGTGGCCGGAGGACCGTAT+AGG | 0.530363 | 7.1:-78680704 | None:intergenic |
| CTTTACAAAGAAAAGCCGCC+GGG | 0.532716 | 7.1:-78680578 | None:intergenic |
| TATGGTGGCTGTGGCTGAGG+TGG | 0.539082 | 7.1:-78680379 | None:intergenic |
| TTTGTCGGCGGTGGTTGTGG+TGG | 0.539334 | 7.1:+78680750 | MS.gene022048:CDS |
| GTGCCGCTCGGCCCCATGCG+CGG | 0.541980 | 7.1:+78680437 | MS.gene022048:CDS |
| GTTGATTGTAATTCTTGTGG+TGG | 0.542628 | 7.1:+78680981 | MS.gene022048:CDS |
| CTGTGGCTGAGGTGGTGGTG+AGG | 0.545540 | 7.1:-78680371 | None:intergenic |
| ACCTATTCAAGACCTCCAAA+AGG | 0.546280 | 7.1:+78682841 | MS.gene022048:CDS |
| GCGCGGCAGAAAACCGCGCA+TGG | 0.548669 | 7.1:-78680450 | None:intergenic |
| CGTTGATGGCGGCTTGCAAG+AGG | 0.550196 | 7.1:-78680654 | None:intergenic |
| AACTTCTGTAATTAGTGATG+TGG | 0.558143 | 7.1:-78683088 | None:intergenic |
| TCGGCACCTAAAAGGGTGGC+CGG | 0.561181 | 7.1:-78680717 | None:intergenic |
| TTGTGAGGTGGAGGAAGAGG+AGG | 0.565784 | 7.1:+78680776 | MS.gene022048:CDS |
| CTTGTTGATTGTAATTCTTG+TGG | 0.567671 | 7.1:+78680978 | MS.gene022048:CDS |
| CATAAGGTCTGCGGCAACGT+GGG | 0.569294 | 7.1:+78680398 | MS.gene022048:CDS |
| TGTTCCTGTTCAACAACAGC+AGG | 0.577069 | 7.1:+78681115 | MS.gene022048:CDS |
| AGCATGTGACACGTGCCGCT+CGG | 0.577146 | 7.1:+78680425 | MS.gene022048:CDS |
| ATAGAGAAGCAAGAGTCCTA+AGG | 0.578755 | 7.1:+78682923 | MS.gene022048:CDS |
| GTTCGTGCCTCGAGGCTACA+CGG | 0.579119 | 7.1:-78680524 | None:intergenic |
| GCGGCAGAAAACCGCGCATG+GGG | 0.588981 | 7.1:-78680448 | None:intergenic |
| GCTTTACAAAGAAAAGCCGC+CGG | 0.590036 | 7.1:-78680579 | None:intergenic |
| GGGTTACCTATACGGTCCTC+CGG | 0.593643 | 7.1:+78680698 | MS.gene022048:CDS |
| AATAACAACAACATTAGCAA+TGG | 0.607541 | 7.1:+78680894 | MS.gene022048:CDS |
| AAACCGCGCATGGGGCCGAG+CGG | 0.610346 | 7.1:-78680440 | None:intergenic |
| TAGCAATGGTCATAATCAAG+AGG | 0.613653 | 7.1:+78680908 | MS.gene022048:CDS |
| ACGCGGCCGAGTTTCAGCAT+AGG | 0.616320 | 7.1:-78683007 | None:intergenic |
| CCATAAGGTCTGCGGCAACG+TGG | 0.618452 | 7.1:+78680397 | MS.gene022048:CDS |
| GGAAAGCCTATGCTGAAACT+CGG | 0.623923 | 7.1:+78683001 | MS.gene022048:CDS |
| AAAGCTGGATTCAGTTACAA+TGG | 0.625769 | 7.1:+78681176 | MS.gene022048:CDS |
| AGCAATGGTCATAATCAAGA+GGG | 0.627143 | 7.1:+78680909 | MS.gene022048:CDS |
| CACAGCCACCATAAGGTCTG+CGG | 0.627512 | 7.1:+78680389 | MS.gene022048:CDS |
| GTTGATGGCGGCTTGCAAGA+GGG | 0.631032 | 7.1:-78680653 | None:intergenic |
| GTGGATATCAGCATCACAAG+TGG | 0.632088 | 7.1:-78680622 | None:intergenic |
| CACAAGAATTACAATCAACA+AGG | 0.639171 | 7.1:-78680977 | None:intergenic |
| AGGCTACACGGTTTGCCGCG+TGG | 0.644154 | 7.1:-78680512 | None:intergenic |
| ATCTTCGGCACCTAAAAGGG+TGG | 0.644787 | 7.1:-78680721 | None:intergenic |
| GTGGATGCGTGCATCACACG+CGG | 0.646833 | 7.1:-78680493 | None:intergenic |
| TTGCAAGAGGGTTAGCAGAG+TGG | 0.655218 | 7.1:-78680641 | None:intergenic |
| GAAGATGAAGGCTTTGTCGG+CGG | 0.655301 | 7.1:+78680738 | MS.gene022048:CDS |
| CGAACGCGTCTGGGTCTGTG+AGG | 0.656001 | 7.1:+78680542 | MS.gene022048:CDS |
| GCTGGATTCAGTTACAATGG+TGG | 0.656212 | 7.1:+78681179 | MS.gene022048:CDS |
| GAATCGGGACACGTTGATGG+CGG | 0.662257 | 7.1:-78680665 | None:intergenic |
| GCACCTAAAAGGGTGGCCGG+AGG | 0.665880 | 7.1:-78680714 | None:intergenic |
| CGTTGCCGCAGACCTTATGG+TGG | 0.670034 | 7.1:-78680394 | None:intergenic |
| GTGTGATGCACGCATCCACG+CGG | 0.684344 | 7.1:+78680497 | MS.gene022048:CDS |
| CGGCAAACCGTGTAGCCTCG+AGG | 0.686538 | 7.1:+78680517 | MS.gene022048:CDS |
| ATAAATATGCCGAATCTGCG+CGG | 0.687353 | 7.1:-78680467 | None:intergenic |
| TTTACAAAGAAAAGCCGCCG+GGG | 0.712447 | 7.1:-78680577 | None:intergenic |
| CCAGACGCGTTCGTGCCTCG+AGG | 0.721870 | 7.1:-78680532 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTGAAATATTTATCTTTAA+GGG | + | chr7.1:78682326-78682345 | MS.gene022048:intron | 10.0% |
| !! | TATTGAAATATTTATCTTTA+AGG | + | chr7.1:78682325-78682344 | MS.gene022048:intron | 10.0% |
| !! | TATTAGTGATAAAAAAAAGT+AGG | - | chr7.1:78682747-78682766 | None:intergenic | 15.0% |
| !! | TTAAAATTCATAAAGTTTGA+GGG | - | chr7.1:78681590-78681609 | None:intergenic | 15.0% |
| !!! | TGATTTTCTCAAATTATTAA+TGG | + | chr7.1:78681994-78682013 | MS.gene022048:intron | 15.0% |
| !!! | TTTTATGAAATTGTTGAAAA+TGG | - | chr7.1:78681835-78681854 | None:intergenic | 15.0% |
| !! | AAATACCTATTTGTAAACTA+AGG | - | chr7.1:78681650-78681669 | None:intergenic | 20.0% |
| !! | GAAAATTTGAGAAAACAATT+AGG | + | chr7.1:78682968-78682987 | MS.gene022048:CDS | 20.0% |
| !! | GTTAAAATTCATAAAGTTTG+AGG | - | chr7.1:78681591-78681610 | None:intergenic | 20.0% |
| !! | TTACTCAAAAGTGAAAATAA+TGG | + | chr7.1:78681426-78681445 | MS.gene022048:intron | 20.0% |
| !!! | AAGAAAAAGTGTAAAGAAAA+AGG | - | chr7.1:78682070-78682089 | None:intergenic | 20.0% |
| !!! | AATAATGGATTTTTGTTTAG+TGG | + | chr7.1:78680933-78680952 | MS.gene022048:CDS | 20.0% |
| !!! | AGAAAAAGTGTAAAGAAAAA+GGG | - | chr7.1:78682069-78682088 | None:intergenic | 20.0% |
| !!! | TATTCTAGAAAATTGATACT+TGG | - | chr7.1:78682203-78682222 | None:intergenic | 20.0% |
| !!! | TTTCATTTTCTTTTCTTATC+AGG | + | chr7.1:78682771-78682790 | MS.gene022048:intron | 20.0% |
| ! | AAAAAAGTAGGAGATATCAA+AGG | - | chr7.1:78682735-78682754 | None:intergenic | 25.0% |
| ! | AATAACAACAACATTAGCAA+TGG | + | chr7.1:78680894-78680913 | MS.gene022048:CDS | 25.0% |
| ! | CCAATAATTGTCATTCTTAT+CGG | - | chr7.1:78682653-78682672 | None:intergenic | 25.0% |
| ! | TATTTGTAAACTAAGGTTCT+GGG | - | chr7.1:78681643-78681662 | None:intergenic | 25.0% |
| ! | TCAGGTCTAATATTGTAAAT+TGG | + | chr7.1:78682473-78682492 | MS.gene022048:intron | 25.0% |
| ! | TCTCAAATTATTAATGGTGT+CGG | + | chr7.1:78682000-78682019 | MS.gene022048:intron | 25.0% |
| ! | TTCAGTGTAATTATATGTGT+CGG | - | chr7.1:78681969-78681988 | None:intergenic | 25.0% |
| ! | TTTGAATTTGATATGCTTTG+TGG | + | chr7.1:78681690-78681709 | MS.gene022048:intron | 25.0% |
| !! | AATCTACAGAAGTCAATTTT+GGG | - | chr7.1:78682390-78682409 | None:intergenic | 25.0% |
| !! | GGACAAATTTTAAATCTTGT+CGG | - | chr7.1:78681469-78681488 | None:intergenic | 25.0% |
| !! | TTGTTATTGATGTTCTTTAG+AGG | - | chr7.1:78680864-78680883 | None:intergenic | 25.0% |
| !!! | TCTTTACACTTTTTCTTTAG+TGG | + | chr7.1:78682073-78682092 | MS.gene022048:intron | 25.0% |
| !!! | TTGTTTTGTTTGCAATTGTT+TGG | + | chr7.1:78681284-78681303 | MS.gene022048:intron | 25.0% |
| AAAAAGGGTAAAGAGCTATA+CGG | - | chr7.1:78682054-78682073 | None:intergenic | 30.0% | |
| AAACAATCTAGTCTAGGAAA+CGG | - | chr7.1:78681811-78681830 | None:intergenic | 30.0% | |
| AAACAATTAGGTATGCTTCA+AGG | + | chr7.1:78682980-78682999 | MS.gene022048:CDS | 30.0% | |
| AACTTCTGTAATTAGTGATG+TGG | - | chr7.1:78683091-78683110 | None:intergenic | 30.0% | |
| ACATCACTAATTACAGAAGT+TGG | + | chr7.1:78683090-78683109 | MS.gene022048:CDS | 30.0% | |
| ATCGGTAAGAACATAAATCT+TGG | - | chr7.1:78682635-78682654 | None:intergenic | 30.0% | |
| CAACAACAACAAGATCATTA+TGG | + | chr7.1:78681059-78681078 | MS.gene022048:CDS | 30.0% | |
| CACAAGAATTACAATCAACA+AGG | - | chr7.1:78680980-78680999 | None:intergenic | 30.0% | |
| CAGAACCTTAGTTTACAAAT+AGG | + | chr7.1:78681642-78681661 | MS.gene022048:intron | 30.0% | |
| CATAATCAAGAGGGTAATAA+TGG | + | chr7.1:78680918-78680937 | MS.gene022048:CDS | 30.0% | |
| CCGATAAGAATGACAATTAT+TGG | + | chr7.1:78682650-78682669 | MS.gene022048:intron | 30.0% | |
| CTAATTACAGAAGTTGGATA+TGG | + | chr7.1:78683096-78683115 | MS.gene022048:CDS | 30.0% | |
| CTATTTGTAAACTAAGGTTC+TGG | - | chr7.1:78681644-78681663 | None:intergenic | 30.0% | |
| CTCATCATGATGAGTATTAT+TGG | - | chr7.1:78681027-78681046 | None:intergenic | 30.0% | |
| GGATCGCAATATTTAAACAA+AGG | + | chr7.1:78682494-78682513 | MS.gene022048:intron | 30.0% | |
| TACTACTAAAGTGGACAAAT+TGG | + | chr7.1:78681520-78681539 | MS.gene022048:intron | 30.0% | |
| TATAAAGCTCGAATACTCAT+CGG | + | chr7.1:78681902-78681921 | MS.gene022048:intron | 30.0% | |
| TCAAACTCTTACTACTAAAG+TGG | + | chr7.1:78681511-78681530 | MS.gene022048:intron | 30.0% | |
| TGTTTGCAATTGTTTGGAAA+GGG | + | chr7.1:78681290-78681309 | MS.gene022048:intron | 30.0% | |
| TTGTTTGCAATTGTTTGGAA+AGG | + | chr7.1:78681289-78681308 | MS.gene022048:intron | 30.0% | |
| ! | AATAGGTCAATTGTTCCTTT+TGG | - | chr7.1:78682859-78682878 | None:intergenic | 30.0% |
| ! | AGGTACAGAATTTTCAACTT+GGG | + | chr7.1:78681135-78681154 | MS.gene022048:CDS | 30.0% |
| ! | AGTGGACAAATTGGTATTTT+TGG | + | chr7.1:78681529-78681548 | MS.gene022048:intron | 30.0% |
| ! | ATCTACAGAAGTCAATTTTG+GGG | - | chr7.1:78682389-78682408 | None:intergenic | 30.0% |
| ! | ATTTTAAATCTTGTCGGAGA+CGG | - | chr7.1:78681463-78681482 | None:intergenic | 30.0% |
| ! | CTTGTTGATTGTAATTCTTG+TGG | + | chr7.1:78680978-78680997 | MS.gene022048:CDS | 30.0% |
| ! | GAATCTACAGAAGTCAATTT+TGG | - | chr7.1:78682391-78682410 | None:intergenic | 30.0% |
| !! | TGCTGTTGTTAATTTGCATT+TGG | + | chr7.1:78681764-78681783 | MS.gene022048:intron | 30.0% |
| !!! | TACACTTTTTCTTTAGTGGA+AGG | + | chr7.1:78682077-78682096 | MS.gene022048:intron | 30.0% |
| AAAGCTGGATTCAGTTACAA+TGG | + | chr7.1:78681176-78681195 | MS.gene022048:CDS | 35.0% | |
| AAGTATCATGCTTTCTTGCT+AGG | + | chr7.1:78682112-78682131 | MS.gene022048:intron | 35.0% | |
| AATGGCAAACAATCTAGTCT+AGG | - | chr7.1:78681817-78681836 | None:intergenic | 35.0% | |
| ACTCAGAGTTTACTGATAAG+TGG | + | chr7.1:78682437-78682456 | MS.gene022048:intron | 35.0% | |
| AGCAATGGTCATAATCAAGA+GGG | + | chr7.1:78680909-78680928 | MS.gene022048:CDS | 35.0% | |
| ATGAAAATGAAGCTGCTTCA+TGG | + | chr7.1:78680826-78680845 | MS.gene022048:CDS | 35.0% | |
| ATTGTAACTGAATCCAGCTT+TGG | - | chr7.1:78681177-78681196 | None:intergenic | 35.0% | |
| CAGTTTCAATTAGTGCTACA+TGG | + | chr7.1:78682679-78682698 | MS.gene022048:intron | 35.0% | |
| CTTGAAGCCATTTACTAGTA+CGG | + | chr7.1:78682225-78682244 | MS.gene022048:intron | 35.0% | |
| GAATAGAAGGACCTGAAAAT+AGG | - | chr7.1:78682876-78682895 | None:intergenic | 35.0% | |
| GTTCCTCAAAAAAGCTATGT+GGG | + | chr7.1:78681083-78681102 | MS.gene022048:CDS | 35.0% | |
| GTTGATTGTAATTCTTGTGG+TGG | + | chr7.1:78680981-78681000 | MS.gene022048:CDS | 35.0% | |
| TAACCCGAAATTGGAAGAAT+CGG | - | chr7.1:78680684-78680703 | None:intergenic | 35.0% | |
| TAGCAATGGTCATAATCAAG+AGG | + | chr7.1:78680908-78680927 | MS.gene022048:CDS | 35.0% | |
| TCAGGTTTCAGTTTCATCAA+TGG | + | chr7.1:78682789-78682808 | MS.gene022048:intron | 35.0% | |
| TCAGTTTCATCAATGGATGT+TGG | + | chr7.1:78682796-78682815 | MS.gene022048:intron | 35.0% | |
| TCTATCCATTGGAGAGAAAT+GGG | - | chr7.1:78682908-78682927 | None:intergenic | 35.0% | |
| TCTTTAGTGGAAGGAATCTA+AGG | + | chr7.1:78682086-78682105 | MS.gene022048:intron | 35.0% | |
| TGGGAAGACATTTGAATAGA+AGG | - | chr7.1:78682889-78682908 | None:intergenic | 35.0% | |
| TGTTCCTCAAAAAAGCTATG+TGG | + | chr7.1:78681082-78681101 | MS.gene022048:CDS | 35.0% | |
| TGTTGTTCCGTACTAGTAAA+TGG | - | chr7.1:78682235-78682254 | None:intergenic | 35.0% | |
| TGTTTGGAAAGGGTTGAAAT+TGG | + | chr7.1:78681300-78681319 | MS.gene022048:intron | 35.0% | |
| TTCCTCAATACCAATTCAAG+AGG | - | chr7.1:78681392-78681411 | None:intergenic | 35.0% | |
| ! | ACAAGTACAAGTAGTGTTGA+AGG | + | chr7.1:78682252-78682271 | MS.gene022048:intron | 35.0% |
| ! | ACAGAATTTTCAACTTGGGT+TGG | + | chr7.1:78681139-78681158 | MS.gene022048:CDS | 35.0% |
| ! | CAGGTACAGAATTTTCAACT+TGG | + | chr7.1:78681134-78681153 | MS.gene022048:CDS | 35.0% |
| ! | CTTGAATTGGTATTGAGGAA+GGG | + | chr7.1:78681392-78681411 | MS.gene022048:intron | 35.0% |
| ! | GGAACAATTGACCTATTTTC+AGG | + | chr7.1:78682862-78682881 | MS.gene022048:CDS | 35.0% |
| ! | TACTACAGTCACTTTGCAAT+AGG | + | chr7.1:78682532-78682551 | MS.gene022048:intron | 35.0% |
| ! | TAGCAAGAAAGCATGATACT+TGG | - | chr7.1:78682113-78682132 | None:intergenic | 35.0% |
| ! | TCTACAGAAGTCAATTTTGG+GGG | - | chr7.1:78682388-78682407 | None:intergenic | 35.0% |
| ! | TCTTGAATTGGTATTGAGGA+AGG | + | chr7.1:78681391-78681410 | MS.gene022048:intron | 35.0% |
| ! | TCTTTTTCTCTCTGTACCTT+AGG | - | chr7.1:78682942-78682961 | None:intergenic | 35.0% |
| !! | ATTTTGGGGGAATTAGATTC+TGG | - | chr7.1:78682375-78682394 | None:intergenic | 35.0% |
| !! | TCTAGGAAACGGATTATGTA+GGG | - | chr7.1:78681800-78681819 | None:intergenic | 35.0% |
| !! | TGAAGGTGTTGATCATGATA+TGG | + | chr7.1:78680800-78680819 | MS.gene022048:CDS | 35.0% |
| !! | TGGAGAAGTTGATGAGTATT+TGG | + | chr7.1:78680953-78680972 | MS.gene022048:CDS | 35.0% |
| AACCCGAAATTGGAAGAATC+GGG | - | chr7.1:78680683-78680702 | None:intergenic | 40.0% | |
| ACCTATTCAAGACCTCCAAA+AGG | + | chr7.1:78682841-78682860 | MS.gene022048:CDS | 40.0% | |
| ACTCTTGCTTCTCTATCCAT+TGG | - | chr7.1:78682919-78682938 | None:intergenic | 40.0% | |
| AGAGGCTCAAGATCTTGAAT+TGG | - | chr7.1:78681374-78681393 | None:intergenic | 40.0% | |
| AGATCTTGAGCCTCTTGAAT+TGG | + | chr7.1:78681379-78681398 | MS.gene022048:intron | 40.0% | |
| AGCCTCTTGAATTGGTATTG+AGG | + | chr7.1:78681387-78681406 | MS.gene022048:intron | 40.0% | |
| ATAAATATGCCGAATCTGCG+CGG | - | chr7.1:78680470-78680489 | None:intergenic | 40.0% | |
| ATAGAGAAGCAAGAGTCCTA+AGG | + | chr7.1:78682923-78682942 | MS.gene022048:CDS | 40.0% | |
| CATGCTTTCTTGCTAGGAAA+CGG | + | chr7.1:78682118-78682137 | MS.gene022048:intron | 40.0% | |
| CTCTATCCATTGGAGAGAAA+TGG | - | chr7.1:78682909-78682928 | None:intergenic | 40.0% | |
| TGTCCCGATTCTTCCAATTT+CGG | + | chr7.1:78680677-78680696 | MS.gene022048:CDS | 40.0% | |
| TTCATCTTCGGCACCTAAAA+GGG | - | chr7.1:78680727-78680746 | None:intergenic | 40.0% | |
| TTGGAAAGGGTTGAAATTGG+TGG | + | chr7.1:78681303-78681322 | MS.gene022048:intron | 40.0% | |
| ! | AGGTCAATTGTTCCTTTTGG+AGG | - | chr7.1:78682856-78682875 | None:intergenic | 40.0% |
| ! | GAATAGGTCATGGTTGATTC+TGG | - | chr7.1:78682829-78682848 | None:intergenic | 40.0% |
| !! | CCAATTTCGGGTTACCTATA+CGG | + | chr7.1:78680690-78680709 | MS.gene022048:CDS | 40.0% |
| !! | GTCTAGGAAACGGATTATGT+AGG | - | chr7.1:78681801-78681820 | None:intergenic | 40.0% |
| !! | TCCTTTTGGAGGTCTTGAAT+AGG | - | chr7.1:78682845-78682864 | None:intergenic | 40.0% |
| !!! | TCACCCACATAGCTTTTTTG+AGG | - | chr7.1:78681089-78681108 | None:intergenic | 40.0% |
| AACCACAGTTCGCGTAATTG+CGG | + | chr7.1:78681556-78681575 | MS.gene022048:intron | 45.0% | |
| ACAACAGCATGTCAGTCATG+TGG | - | chr7.1:78681753-78681772 | None:intergenic | 45.0% | |
| AGTGGACAAGTCACTTGTTC+AGG | + | chr7.1:78682455-78682474 | MS.gene022048:CDS | 45.0% | |
| CCGTATAGGTAACCCGAAAT+TGG | - | chr7.1:78680693-78680712 | None:intergenic | 45.0% | |
| CTTCATCTTCGGCACCTAAA+AGG | - | chr7.1:78680728-78680747 | None:intergenic | 45.0% | |
| CTTTACAAAGAAAAGCCGCC+GGG | - | chr7.1:78680581-78680600 | None:intergenic | 45.0% | |
| GAGTTTGAGTCTTCCAAAGC+TGG | + | chr7.1:78681161-78681180 | MS.gene022048:CDS | 45.0% | |
| GCTCGAATACTCATCGGATT+AGG | + | chr7.1:78681908-78681927 | MS.gene022048:intron | 45.0% | |
| GCTGGATTCAGTTACAATGG+TGG | + | chr7.1:78681179-78681198 | MS.gene022048:CDS | 45.0% | |
| GCTTTACAAAGAAAAGCCGC+CGG | - | chr7.1:78680582-78680601 | None:intergenic | 45.0% | |
| GGAAAGCCTATGCTGAAACT+CGG | + | chr7.1:78683001-78683020 | MS.gene022048:CDS | 45.0% | |
| GGTAAAGAGCTATACGGACA+CGG | - | chr7.1:78682048-78682067 | None:intergenic | 45.0% | |
| GTCCCGATTCTTCCAATTTC+GGG | + | chr7.1:78680678-78680697 | MS.gene022048:CDS | 45.0% | |
| GTCTTCCCATTTCTCTCCAA+TGG | + | chr7.1:78682900-78682919 | MS.gene022048:CDS | 45.0% | |
| GTGGATATCAGCATCACAAG+TGG | - | chr7.1:78680625-78680644 | None:intergenic | 45.0% | |
| TGGAGGTCTTGAATAGGTCA+TGG | - | chr7.1:78682839-78682858 | None:intergenic | 45.0% | |
| TGTACCTGCTGTTGTTGAAC+AGG | - | chr7.1:78681122-78681141 | None:intergenic | 45.0% | |
| TGTTCCTGTTCAACAACAGC+AGG | + | chr7.1:78681115-78681134 | MS.gene022048:CDS | 45.0% | |
| TTGGGGGAATTAGATTCTGG+AGG | - | chr7.1:78682372-78682391 | None:intergenic | 45.0% | |
| TTTACAAAGAAAAGCCGCCG+GGG | - | chr7.1:78680580-78680599 | None:intergenic | 45.0% | |
| ! | GCGAATCGACCTTTTATACG+CGG | - | chr7.1:78683027-78683046 | None:intergenic | 45.0% |
| !! | TATTAATGGTGTCGGCGTGT+CGG | + | chr7.1:78682008-78682027 | MS.gene022048:intron | 45.0% |
| !!! | CTTTTAGGTGCCGAAGATGA+AGG | + | chr7.1:78680726-78680745 | MS.gene022048:CDS | 45.0% |
| !! | AAAAAATTTATTATGTATAT+TGG | - | chr7.1:78682162-78682181 | None:intergenic | 5.0% |
| !! | ATTATAAATTATAATCTAAA+AGG | - | chr7.1:78681490-78681509 | None:intergenic | 5.0% |
| ATCTTCGGCACCTAAAAGGG+TGG | - | chr7.1:78680724-78680743 | None:intergenic | 50.0% | |
| CAGCATGTCAGTCATGTGGA+AGG | - | chr7.1:78681749-78681768 | None:intergenic | 50.0% | |
| GAAACTCGGCCGCGTATAAA+AGG | + | chr7.1:78683015-78683034 | MS.gene022048:CDS | 50.0% | |
| GAAGAATCGGGACACGTTGA+TGG | - | chr7.1:78680671-78680690 | None:intergenic | 50.0% | |
| GCCGACAAAGCCTTCATCTT+CGG | - | chr7.1:78680739-78680758 | None:intergenic | 50.0% | |
| ! | GAAGATGAAGGCTTTGTCGG+CGG | + | chr7.1:78680738-78680757 | MS.gene022048:CDS | 50.0% |
| ! | GCCGAAGATGAAGGCTTTGT+CGG | + | chr7.1:78680735-78680754 | MS.gene022048:CDS | 50.0% |
| ! | GGGGAATTAGATTCTGGAGG+TGG | - | chr7.1:78682369-78682388 | None:intergenic | 50.0% |
| ! | TCATCGGATTAGGCGTGTCT+CGG | + | chr7.1:78681918-78681937 | MS.gene022048:intron | 50.0% |
| ! | TTGCAAGAGGGTTAGCAGAG+TGG | - | chr7.1:78680644-78680663 | None:intergenic | 50.0% |
| ATACGGACACGGACACGACT+CGG | - | chr7.1:78682037-78682056 | None:intergenic | 55.0% | |
| CACAGCCACCATAAGGTCTG+CGG | + | chr7.1:78680389-78680408 | MS.gene022048:CDS | 55.0% | |
| CATAAGGTCTGCGGCAACGT+GGG | + | chr7.1:78680398-78680417 | MS.gene022048:CDS | 55.0% | |
| CTCCGCAATTACGCGAACTG+TGG | - | chr7.1:78681561-78681580 | None:intergenic | 55.0% | |
| GGGTTACCTATACGGTCCTC+CGG | + | chr7.1:78680698-78680717 | MS.gene022048:CDS | 55.0% | |
| GTGGAGGAAGAGGAGGATGA+AGG | + | chr7.1:78680783-78680802 | MS.gene022048:CDS | 55.0% | |
| TGGTTGTGAGGTGGAGGAAG+AGG | + | chr7.1:78680773-78680792 | MS.gene022048:CDS | 55.0% | |
| TTGTGAGGTGGAGGAAGAGG+AGG | + | chr7.1:78680776-78680795 | MS.gene022048:CDS | 55.0% | |
| ! | GAATCGGGACACGTTGATGG+CGG | - | chr7.1:78680668-78680687 | None:intergenic | 55.0% |
| ! | GATTAGGCGTGTCTCGGTGT+CGG | + | chr7.1:78681924-78681943 | MS.gene022048:intron | 55.0% |
| ! | GGTTTTCTGCCGCGCAGATT+CGG | + | chr7.1:78680458-78680477 | MS.gene022048:CDS | 55.0% |
| !! | GTTGATGGCGGCTTGCAAGA+GGG | - | chr7.1:78680656-78680675 | None:intergenic | 55.0% |
| !! | TGGTTGTGGTGGTGGTTGTG+AGG | + | chr7.1:78680761-78680780 | MS.gene022048:CDS | 55.0% |
| !! | TTGTGGTGGTGGTTGTGAGG+TGG | + | chr7.1:78680764-78680783 | MS.gene022048:CDS | 55.0% |
| ACGCGGCCGAGTTTCAGCAT+AGG | - | chr7.1:78683010-78683029 | None:intergenic | 60.0% | |
| CCACGTTGCCGCAGACCTTA+TGG | - | chr7.1:78680400-78680419 | None:intergenic | 60.0% | |
| CCATAAGGTCTGCGGCAACG+TGG | + | chr7.1:78680397-78680416 | MS.gene022048:CDS | 60.0% | |
| CCTCAGCCACAGCCACCATA+AGG | + | chr7.1:78680382-78680401 | MS.gene022048:CDS | 60.0% | |
| CCTTATGGTGGCTGTGGCTG+AGG | - | chr7.1:78680385-78680404 | None:intergenic | 60.0% | |
| CGCAGACCTTATGGTGGCTG+TGG | - | chr7.1:78680391-78680410 | None:intergenic | 60.0% | |
| CGTTGCCGCAGACCTTATGG+TGG | - | chr7.1:78680397-78680416 | None:intergenic | 60.0% | |
| GTGGATGCGTGCATCACACG+CGG | - | chr7.1:78680496-78680515 | None:intergenic | 60.0% | |
| GTGTGATGCACGCATCCACG+CGG | + | chr7.1:78680497-78680516 | MS.gene022048:CDS | 60.0% | |
| GTTCGTGCCTCGAGGCTACA+CGG | - | chr7.1:78680527-78680546 | None:intergenic | 60.0% | |
| TATGGTGGCTGTGGCTGAGG+TGG | - | chr7.1:78680382-78680401 | None:intergenic | 60.0% | |
| TCGGCACCTAAAAGGGTGGC+CGG | - | chr7.1:78680720-78680739 | None:intergenic | 60.0% | |
| TTTGTCGGCGGTGGTTGTGG+TGG | + | chr7.1:78680750-78680769 | MS.gene022048:CDS | 60.0% | |
| ! | AGCATGTGACACGTGCCGCT+CGG | + | chr7.1:78680425-78680444 | MS.gene022048:CDS | 60.0% |
| ! | GATGAAGGCTTTGTCGGCGG+TGG | + | chr7.1:78680741-78680760 | MS.gene022048:CDS | 60.0% |
| !! | CGTTGATGGCGGCTTGCAAG+AGG | - | chr7.1:78680657-78680676 | None:intergenic | 60.0% |
| !! | TGGTGGTGGTTGTGAGGTGG+AGG | + | chr7.1:78680767-78680786 | MS.gene022048:CDS | 60.0% |
| AGGCTACACGGTTTGCCGCG+TGG | - | chr7.1:78680515-78680534 | None:intergenic | 65.0% | |
| CGAACGCGTCTGGGTCTGTG+AGG | + | chr7.1:78680542-78680561 | MS.gene022048:CDS | 65.0% | |
| CGCGGCAGAAAACCGCGCAT+GGG | - | chr7.1:78680452-78680471 | None:intergenic | 65.0% | |
| CGGCAAACCGTGTAGCCTCG+AGG | + | chr7.1:78680517-78680536 | MS.gene022048:CDS | 65.0% | |
| CTCGAGGCACGAACGCGTCT+GGG | + | chr7.1:78680533-78680552 | MS.gene022048:CDS | 65.0% | |
| GCACCTAAAAGGGTGGCCGG+AGG | - | chr7.1:78680717-78680736 | None:intergenic | 65.0% | |
| GCGGCAGAAAACCGCGCATG+GGG | - | chr7.1:78680451-78680470 | None:intergenic | 65.0% | |
| ! | CTGTGGCTGAGGTGGTGGTG+AGG | - | chr7.1:78680374-78680393 | None:intergenic | 65.0% |
| ! | GGCTTTGTCGGCGGTGGTTG+TGG | + | chr7.1:78680747-78680766 | MS.gene022048:CDS | 65.0% |
| ! | GGTCCTCCGGCCACCCTTTT+AGG | + | chr7.1:78680711-78680730 | MS.gene022048:CDS | 65.0% |
| AAACCGCGCATGGGGCCGAG+CGG | - | chr7.1:78680443-78680462 | None:intergenic | 70.0% | |
| CCAGACGCGTTCGTGCCTCG+AGG | - | chr7.1:78680535-78680554 | None:intergenic | 70.0% | |
| CCTCGAGGCACGAACGCGTC+TGG | + | chr7.1:78680532-78680551 | MS.gene022048:CDS | 70.0% | |
| GCGCGGCAGAAAACCGCGCA+TGG | - | chr7.1:78680453-78680472 | None:intergenic | 70.0% | |
| GGGTGGCCGGAGGACCGTAT+AGG | - | chr7.1:78680707-78680726 | None:intergenic | 70.0% | |
| GGTGGCTGTGGCTGAGGTGG+TGG | - | chr7.1:78680379-78680398 | None:intergenic | 70.0% | |
| GTCGGCGGTGGTTGTGGTGG+TGG | + | chr7.1:78680753-78680772 | MS.gene022048:CDS | 70.0% | |
| TGAGGCCTGCGAGCGTGCCC+CGG | + | chr7.1:78680560-78680579 | MS.gene022048:CDS | 75.0% | |
| !! | GTGCCGCTCGGCCCCATGCG+CGG | + | chr7.1:78680437-78680456 | MS.gene022048:CDS | 80.0% |
| ! | AGCCGCCGGGGCACGCTCGC+AGG | - | chr7.1:78680568-78680587 | None:intergenic | 85.0% |
| ! | GGCCTGCGAGCGTGCCCCGG+CGG | + | chr7.1:78680563-78680582 | MS.gene022048:CDS | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.1 | gene | 78680354 | 78683137 | 78680354 | ID=MS.gene022048 |
| chr7.1 | mRNA | 78680354 | 78683137 | 78680354 | ID=MS.gene022048.t1;Parent=MS.gene022048 |
| chr7.1 | exon | 78680354 | 78681217 | 78680354 | ID=MS.gene022048.t1.exon1;Parent=MS.gene022048.t1 |
| chr7.1 | CDS | 78680354 | 78681217 | 78680354 | ID=cds.MS.gene022048.t1;Parent=MS.gene022048.t1 |
| chr7.1 | exon | 78682443 | 78682476 | 78682443 | ID=MS.gene022048.t1.exon2;Parent=MS.gene022048.t1 |
| chr7.1 | CDS | 78682443 | 78682476 | 78682443 | ID=cds.MS.gene022048.t1;Parent=MS.gene022048.t1 |
| chr7.1 | exon | 78682830 | 78683137 | 78682830 | ID=MS.gene022048.t1.exon3;Parent=MS.gene022048.t1 |
| chr7.1 | CDS | 78682830 | 78683137 | 78682830 | ID=cds.MS.gene022048.t1;Parent=MS.gene022048.t1 |
| Gene Sequence |
| Protein sequence |
