Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75965.t1 | XP_013447714.1 | 85.6 | 403 | 47 | 4 | 1 | 399 | 1 | 396 | 7.70E-117 | 430.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75965.t1 | Q96502 | 49.2 | 398 | 126 | 8 | 19 | 399 | 9 | 347 | 1.3e-51 | 205.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75965.t1 | A0A072TWC7 | 85.6 | 403 | 47 | 4 | 1 | 399 | 1 | 396 | 5.6e-117 | 430.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene75965.t1 | TF | C2C2-CO-like |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049232 | MS.gene75965 | 0.820162 | 7.94E-53 | -1.69E-46 |
| MS.gene049369 | MS.gene75965 | 0.801483 | 8.81E-49 | -1.69E-46 |
| MS.gene049396 | MS.gene75965 | 0.830201 | 3.36E-55 | -1.69E-46 |
| MS.gene050216 | MS.gene75965 | 0.807457 | 5.01E-50 | -1.69E-46 |
| MS.gene050499 | MS.gene75965 | 0.825454 | 4.65E-54 | -1.69E-46 |
| MS.gene050502 | MS.gene75965 | 0.813624 | 2.33E-51 | -1.69E-46 |
| MS.gene05118 | MS.gene75965 | 0.813488 | 2.50E-51 | -1.69E-46 |
| MS.gene051509 | MS.gene75965 | 0.877582 | 5.60E-69 | -1.69E-46 |
| MS.gene053574 | MS.gene75965 | 0.80284 | 4.63E-49 | -1.69E-46 |
| MS.gene053626 | MS.gene75965 | 0.807346 | 5.29E-50 | -1.69E-46 |
| MS.gene055629 | MS.gene75965 | 0.81255 | 4.01E-51 | -1.69E-46 |
| MS.gene056422 | MS.gene75965 | 0.870693 | 1.20E-66 | -1.69E-46 |
| MS.gene056446 | MS.gene75965 | 0.806259 | 8.97E-50 | -1.69E-46 |
| MS.gene057086 | MS.gene75965 | 0.807055 | 6.09E-50 | -1.69E-46 |
| MS.gene057537 | MS.gene75965 | 0.80689 | 6.60E-50 | -1.69E-46 |
| MS.gene058459 | MS.gene75965 | 0.858881 | 6.07E-63 | -1.69E-46 |
| MS.gene059367 | MS.gene75965 | 0.83661 | 8.46E-57 | -1.69E-46 |
| MS.gene059368 | MS.gene75965 | 0.810153 | 1.33E-50 | -1.69E-46 |
| MS.gene059517 | MS.gene75965 | 0.815011 | 1.15E-51 | -1.69E-46 |
| MS.gene059711 | MS.gene75965 | 0.812449 | 4.22E-51 | -1.69E-46 |
| MS.gene059865 | MS.gene75965 | 0.811278 | 7.58E-51 | -1.69E-46 |
| MS.gene060482 | MS.gene75965 | 0.812863 | 3.42E-51 | -1.69E-46 |
| MS.gene06097 | MS.gene75965 | 0.814159 | 1.78E-51 | -1.69E-46 |
| MS.gene061134 | MS.gene75965 | 0.822285 | 2.57E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene018362 | MS.gene75965 | PPI |
| MS.gene035678 | MS.gene75965 | PPI |
| MS.gene57909 | MS.gene75965 | PPI |
| MS.gene75965 | MS.gene62915 | PPI |
| MS.gene44781 | MS.gene75965 | PPI |
| MS.gene022048 | MS.gene75965 | PPI |
| MS.gene012430 | MS.gene75965 | PPI |
| MS.gene62915 | MS.gene75965 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75965.t1 | MTR_7g018170 | 91.067 | 403 | 25 | 5 | 1 | 399 | 1 | 396 | 0.0 | 624 |
| MS.gene75965.t1 | MTR_4g128930 | 38.293 | 410 | 165 | 14 | 24 | 399 | 20 | 375 | 1.86e-74 | 236 |
| MS.gene75965.t1 | MTR_1g013450 | 36.649 | 382 | 165 | 9 | 24 | 398 | 4 | 315 | 3.51e-69 | 221 |
| MS.gene75965.t1 | MTR_3g105710 | 37.143 | 385 | 135 | 11 | 23 | 398 | 3 | 289 | 9.05e-65 | 209 |
| MS.gene75965.t1 | MTR_7g083540 | 27.461 | 386 | 238 | 12 | 26 | 374 | 5 | 385 | 2.51e-22 | 98.2 |
| MS.gene75965.t1 | MTR_4g067320 | 43.478 | 92 | 43 | 1 | 26 | 108 | 5 | 96 | 2.18e-18 | 84.3 |
| MS.gene75965.t1 | MTR_4g067320 | 39.474 | 76 | 40 | 1 | 69 | 138 | 5 | 80 | 4.63e-11 | 62.8 |
| MS.gene75965.t1 | MTR_4g067320 | 43.478 | 92 | 43 | 1 | 26 | 108 | 5 | 96 | 2.22e-18 | 84.0 |
| MS.gene75965.t1 | MTR_4g067320 | 39.474 | 76 | 40 | 1 | 69 | 138 | 5 | 80 | 4.71e-11 | 62.8 |
| MS.gene75965.t1 | MTR_1g023260 | 41.935 | 93 | 44 | 1 | 26 | 108 | 5 | 97 | 8.00e-18 | 83.2 |
| MS.gene75965.t1 | MTR_5g021580 | 48.750 | 80 | 33 | 1 | 26 | 97 | 5 | 84 | 9.10e-18 | 81.3 |
| MS.gene75965.t1 | MTR_5g021580 | 48.750 | 80 | 33 | 1 | 26 | 97 | 5 | 84 | 9.75e-18 | 81.3 |
| MS.gene75965.t1 | MTR_1g023260 | 41.935 | 93 | 44 | 1 | 26 | 108 | 5 | 97 | 1.10e-17 | 80.9 |
| MS.gene75965.t1 | MTR_5g069480 | 42.857 | 91 | 52 | 0 | 26 | 116 | 5 | 95 | 2.39e-17 | 82.4 |
| MS.gene75965.t1 | MTR_5g069480 | 42.857 | 91 | 52 | 0 | 26 | 116 | 5 | 95 | 3.18e-17 | 83.2 |
| MS.gene75965.t1 | MTR_2g073370 | 43.478 | 92 | 43 | 1 | 26 | 108 | 5 | 96 | 3.74e-17 | 81.6 |
| MS.gene75965.t1 | MTR_7g108150 | 35.088 | 114 | 66 | 3 | 23 | 132 | 17 | 126 | 6.56e-17 | 82.0 |
| MS.gene75965.t1 | MTR_2g099010 | 40.217 | 92 | 46 | 1 | 26 | 108 | 5 | 96 | 2.04e-16 | 78.6 |
| MS.gene75965.t1 | MTR_2g099010 | 50.000 | 50 | 25 | 0 | 69 | 118 | 5 | 54 | 8.05e-11 | 62.4 |
| MS.gene75965.t1 | MTR_2g099010 | 40.217 | 92 | 46 | 1 | 26 | 108 | 5 | 96 | 2.44e-16 | 78.6 |
| MS.gene75965.t1 | MTR_2g099010 | 50.000 | 50 | 25 | 0 | 69 | 118 | 5 | 54 | 9.24e-11 | 62.0 |
| MS.gene75965.t1 | MTR_3g113070 | 33.333 | 111 | 63 | 1 | 26 | 125 | 5 | 115 | 3.90e-15 | 74.7 |
| MS.gene75965.t1 | MTR_4g071200 | 38.710 | 93 | 47 | 1 | 26 | 108 | 5 | 97 | 1.71e-14 | 72.8 |
| MS.gene75965.t1 | MTR_3g082630 | 41.758 | 91 | 52 | 1 | 26 | 116 | 5 | 94 | 3.42e-14 | 73.9 |
| MS.gene75965.t1 | MTR_3g117320 | 36.559 | 93 | 49 | 1 | 26 | 108 | 5 | 97 | 2.09e-13 | 69.7 |
| MS.gene75965.t1 | MTR_8g104190 | 32.086 | 187 | 93 | 4 | 204 | 373 | 232 | 401 | 6.62e-13 | 70.1 |
| MS.gene75965.t1 | MTR_1g109350 | 37.838 | 74 | 46 | 0 | 24 | 97 | 3 | 76 | 1.72e-11 | 65.5 |
| MS.gene75965.t1 | MTR_2g088900 | 35.165 | 91 | 59 | 0 | 16 | 106 | 91 | 181 | 3.71e-11 | 65.1 |
| MS.gene75965.t1 | MTR_3g034680 | 47.368 | 57 | 25 | 1 | 58 | 114 | 4 | 55 | 5.12e-11 | 59.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75965.t1 | AT3G02380 | 53.518 | 398 | 109 | 11 | 19 | 399 | 9 | 347 | 1.19e-123 | 361 |
| MS.gene75965.t1 | AT5G15840 | 50.508 | 394 | 141 | 13 | 23 | 399 | 17 | 373 | 5.14e-110 | 328 |
| MS.gene75965.t1 | AT5G15850 | 49.626 | 401 | 138 | 8 | 16 | 399 | 2 | 355 | 1.24e-108 | 323 |
| MS.gene75965.t1 | AT5G24930 | 40.152 | 396 | 182 | 9 | 23 | 399 | 3 | 362 | 2.46e-73 | 233 |
| MS.gene75965.t1 | AT5G57660 | 41.878 | 394 | 155 | 15 | 23 | 399 | 19 | 355 | 7.49e-72 | 229 |
| MS.gene75965.t1 | AT2G24790 | 38.843 | 363 | 123 | 13 | 20 | 374 | 2 | 273 | 1.38e-66 | 214 |
| MS.gene75965.t1 | AT5G15840 | 47.653 | 277 | 101 | 9 | 23 | 290 | 17 | 258 | 1.84e-63 | 205 |
| MS.gene75965.t1 | AT2G24790 | 42.857 | 182 | 78 | 5 | 20 | 198 | 2 | 160 | 7.22e-41 | 144 |
| MS.gene75965.t1 | AT1G78600 | 44.565 | 92 | 42 | 1 | 26 | 108 | 5 | 96 | 2.08e-18 | 85.9 |
| MS.gene75965.t1 | AT1G78600 | 44.565 | 92 | 42 | 1 | 26 | 108 | 5 | 96 | 2.17e-18 | 85.5 |
| MS.gene75965.t1 | AT1G06040 | 43.478 | 92 | 43 | 1 | 26 | 108 | 5 | 96 | 3.12e-17 | 81.3 |
| MS.gene75965.t1 | AT2G21320 | 47.500 | 80 | 34 | 1 | 26 | 97 | 5 | 84 | 6.09e-17 | 78.6 |
| MS.gene75965.t1 | AT2G47890 | 38.710 | 93 | 55 | 1 | 24 | 116 | 11 | 101 | 8.19e-17 | 80.9 |
| MS.gene75965.t1 | AT1G06040 | 43.478 | 92 | 43 | 1 | 26 | 108 | 5 | 96 | 9.42e-17 | 78.2 |
| MS.gene75965.t1 | AT2G47890 | 38.710 | 93 | 55 | 1 | 24 | 116 | 11 | 101 | 1.25e-16 | 79.3 |
| MS.gene75965.t1 | AT2G47890 | 38.710 | 93 | 55 | 1 | 24 | 116 | 11 | 101 | 1.29e-16 | 80.9 |
| MS.gene75965.t1 | AT2G47890 | 51.852 | 54 | 26 | 0 | 321 | 374 | 278 | 331 | 8.73e-11 | 63.2 |
| MS.gene75965.t1 | AT4G38960 | 45.000 | 80 | 36 | 1 | 26 | 97 | 5 | 84 | 1.56e-16 | 77.8 |
| MS.gene75965.t1 | AT4G38960 | 45.000 | 80 | 36 | 1 | 26 | 97 | 5 | 84 | 1.56e-16 | 77.8 |
| MS.gene75965.t1 | AT2G33500 | 34.127 | 126 | 75 | 2 | 25 | 150 | 11 | 128 | 5.33e-16 | 79.7 |
| MS.gene75965.t1 | AT2G33500 | 63.043 | 46 | 17 | 0 | 329 | 374 | 355 | 400 | 1.19e-11 | 66.2 |
| MS.gene75965.t1 | AT2G33500 | 34.127 | 126 | 75 | 2 | 25 | 150 | 11 | 128 | 5.36e-16 | 79.7 |
| MS.gene75965.t1 | AT2G33500 | 63.043 | 46 | 17 | 0 | 329 | 374 | 356 | 401 | 1.17e-11 | 66.2 |
| MS.gene75965.t1 | AT2G31380 | 40.217 | 92 | 46 | 1 | 26 | 108 | 5 | 96 | 7.90e-16 | 77.0 |
| MS.gene75965.t1 | AT1G75540 | 37.895 | 95 | 47 | 1 | 26 | 108 | 5 | 99 | 1.35e-15 | 77.8 |
| MS.gene75965.t1 | AT1G28050 | 35.922 | 103 | 63 | 1 | 26 | 128 | 9 | 108 | 1.76e-14 | 75.1 |
| MS.gene75965.t1 | AT5G48250 | 39.785 | 93 | 54 | 1 | 26 | 116 | 5 | 97 | 6.24e-14 | 73.2 |
| MS.gene75965.t1 | AT3G07650 | 43.056 | 72 | 41 | 0 | 26 | 97 | 5 | 76 | 1.15e-12 | 69.3 |
| MS.gene75965.t1 | AT3G07650 | 43.056 | 72 | 41 | 0 | 26 | 97 | 5 | 76 | 1.15e-12 | 69.3 |
| MS.gene75965.t1 | AT3G07650 | 43.056 | 72 | 41 | 0 | 26 | 97 | 5 | 76 | 1.15e-12 | 69.3 |
| MS.gene75965.t1 | AT3G07650 | 43.056 | 72 | 41 | 0 | 26 | 97 | 5 | 76 | 1.15e-12 | 69.3 |
| MS.gene75965.t1 | AT1G68190 | 34.000 | 100 | 61 | 2 | 24 | 123 | 41 | 135 | 1.29e-12 | 69.3 |
| MS.gene75965.t1 | AT1G68190 | 34.000 | 100 | 61 | 2 | 24 | 123 | 12 | 106 | 1.57e-12 | 68.6 |
| MS.gene75965.t1 | AT1G68190 | 34.000 | 100 | 61 | 2 | 24 | 123 | 12 | 106 | 1.57e-12 | 68.6 |
| MS.gene75965.t1 | AT1G73870 | 65.957 | 47 | 16 | 0 | 329 | 375 | 344 | 390 | 2.29e-12 | 68.6 |
| MS.gene75965.t1 | AT4G15250 | 35.714 | 84 | 54 | 0 | 26 | 109 | 5 | 88 | 3.53e-12 | 67.4 |
| MS.gene75965.t1 | AT4G10240 | 34.694 | 98 | 45 | 2 | 26 | 108 | 5 | 98 | 6.52e-12 | 63.9 |
| MS.gene75965.t1 | AT1G25440 | 34.028 | 144 | 57 | 4 | 249 | 372 | 278 | 403 | 8.99e-12 | 66.6 |
| MS.gene75965.t1 | AT3G21880 | 35.165 | 91 | 57 | 1 | 26 | 116 | 9 | 97 | 2.09e-11 | 65.5 |
| MS.gene75965.t1 | AT3G21880 | 35.165 | 91 | 57 | 1 | 26 | 116 | 9 | 97 | 2.09e-11 | 65.5 |
| MS.gene75965.t1 | AT3G21880 | 35.165 | 91 | 57 | 1 | 26 | 116 | 5 | 93 | 2.16e-11 | 65.5 |
| MS.gene75965.t1 | AT1G68520 | 63.043 | 46 | 17 | 0 | 330 | 375 | 357 | 402 | 3.69e-11 | 64.7 |
| MS.gene75965.t1 | AT5G14370 | 47.619 | 63 | 33 | 0 | 312 | 374 | 276 | 338 | 4.08e-11 | 64.3 |
| MS.gene75965.t1 | AT4G39070 | 36.559 | 93 | 49 | 1 | 26 | 108 | 5 | 97 | 4.40e-11 | 63.2 |
Find 106 sgRNAs with CRISPR-Local
Find 199 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTCCCGATTCTTCCAATTTC+GGG | 0.189546 | 7.3:+80151679 | MS.gene75965:CDS |
| CTCATCATGATGAGTATTAT+TGG | 0.214592 | 7.3:-80152025 | None:intergenic |
| CTTCATCTTCGGCACCTAAA+AGG | 0.221370 | 7.3:-80151726 | None:intergenic |
| AATAGGTCAATTGTTCCTTT+TGG | 0.257022 | 7.3:-80153851 | None:intergenic |
| TGTCCCGATTCTTCCAATTT+CGG | 0.284602 | 7.3:+80151678 | MS.gene75965:CDS |
| CCTCGAGGCACGAACGCGTC+TGG | 0.290131 | 7.3:+80151533 | MS.gene75965:CDS |
| GAAACTCGGCCGCGTATAAA+AGG | 0.298232 | 7.3:+80154010 | MS.gene75965:CDS |
| TTGTTATTGATGTTCTTTAG+AGG | 0.325161 | 7.3:-80151862 | None:intergenic |
| CCAATTTCGGGTTACCTATA+CGG | 0.340122 | 7.3:+80151691 | MS.gene75965:CDS |
| ATGAAAATGAAGCTGCTTCA+TGG | 0.340820 | 7.3:+80151827 | MS.gene75965:CDS |
| CTCTATCCATTGGAGAGAAA+TGG | 0.342666 | 7.3:-80153901 | None:intergenic |
| GAAAATTTGAGAAAACAATT+AGG | 0.345101 | 7.3:+80153963 | MS.gene75965:CDS |
| AGCCGCCGGGGCACGCTCGC+AGG | 0.350184 | 7.3:-80151566 | None:intergenic |
| GGCTTTGTCGGCGGTGGTTG+TGG | 0.350451 | 7.3:+80151748 | MS.gene75965:CDS |
| CATAATCAAGAGGGTAATAA+TGG | 0.353323 | 7.3:+80151919 | MS.gene75965:CDS |
| TTTAACATCATTTCAGAAAG+AGG | 0.365033 | 7.3:-80154122 | None:intergenic |
| CTAATTACAGAAGTTGGATA+TGG | 0.366492 | 7.3:+80154091 | MS.gene75965:CDS |
| CCGTATAGGTAACCCGAAAT+TGG | 0.367447 | 7.3:-80151691 | None:intergenic |
| CTCTCTGTACCTTAGGACTT+TGG | 0.375434 | 7.3:-80153927 | None:intergenic |
| TGGGAAGACATTTGAATAGA+AGG | 0.383605 | 7.3:-80153881 | None:intergenic |
| AGTGGACAAGTCACTTGTTC+AGG | 0.385352 | 7.3:+80153450 | MS.gene75965:CDS |
| CAACAACAACAAGATCATTA+TGG | 0.386116 | 7.3:+80152054 | MS.gene75965:CDS |
| GTCGGCGGTGGTTGTGGTGG+TGG | 0.399578 | 7.3:+80151754 | MS.gene75965:CDS |
| GAATAGAAGGACCTGAAAAT+AGG | 0.406008 | 7.3:-80153868 | None:intergenic |
| CCTCAGCCACAGCCACTATA+AGG | 0.407249 | 7.3:+80151383 | MS.gene75965:CDS |
| TGGTTGTGAGGTGGAGGAAG+AGG | 0.415419 | 7.3:+80151774 | MS.gene75965:CDS |
| TGGTGGTGGTTGTGAGGTGG+AGG | 0.415856 | 7.3:+80151768 | MS.gene75965:CDS |
| CCTTATAGTGGCTGTGGCTG+AGG | 0.420270 | 7.3:-80151383 | None:intergenic |
| TAACCCGAAATTGGAAGAAT+CGG | 0.422897 | 7.3:-80151682 | None:intergenic |
| GAGTTTGAGTCTTCCAAAGC+TGG | 0.426808 | 7.3:+80152156 | MS.gene75965:CDS |
| GAAGAATCGGGACACGTTGA+TGG | 0.431550 | 7.3:-80151669 | None:intergenic |
| ATTGTAACTGAATCCAGCTT+TGG | 0.441148 | 7.3:-80152169 | None:intergenic |
| TGTACCTGCTGTTGTTGAAC+AGG | 0.442029 | 7.3:-80152114 | None:intergenic |
| TGAAGGTGTTGATCATGATA+TGG | 0.443702 | 7.3:+80151801 | MS.gene75965:CDS |
| GATGAAGGCTTTGTCGGCGG+TGG | 0.445280 | 7.3:+80151742 | MS.gene75965:CDS |
| TCTATCCATTGGAGAGAAAT+GGG | 0.447374 | 7.3:-80153900 | None:intergenic |
| GTCTTCCCATTTCTCTCCAA+TGG | 0.450964 | 7.3:+80153895 | MS.gene75965:CDS |
| ACATCACTAATTACAGAAGT+TGG | 0.453991 | 7.3:+80154085 | MS.gene75965:CDS |
| CGCGGCAGAAAACCGCGCAT+GGG | 0.457653 | 7.3:-80151450 | None:intergenic |
| TTCATCTTCGGCACCTAAAA+GGG | 0.458034 | 7.3:-80151725 | None:intergenic |
| GGCCTGCGAGCGTGCCCCGG+CGG | 0.459298 | 7.3:+80151564 | MS.gene75965:CDS |
| GCCGACAAAGCCTTCATCTT+CGG | 0.465052 | 7.3:-80151737 | None:intergenic |
| TGAGGCCTGCGAGCGTGCCC+CGG | 0.465827 | 7.3:+80151561 | MS.gene75965:CDS |
| TTGTGGTGGTGGTTGTGAGG+TGG | 0.465870 | 7.3:+80151765 | MS.gene75965:CDS |
| CTCGAGGCACGAACGCGTCT+GGG | 0.468750 | 7.3:+80151534 | MS.gene75965:CDS |
| ACTTTGGCTTCTCTATCCAT+TGG | 0.469238 | 7.3:-80153911 | None:intergenic |
| TGGAGAAGTTGATGAGTACT+TGG | 0.471287 | 7.3:+80151954 | MS.gene75965:CDS |
| ACTCAGAGTTTACTGATAAG+TGG | 0.476306 | 7.3:+80153432 | MS.gene75965:intron |
| GCCGAAGATGAAGGCTTTGT+CGG | 0.477058 | 7.3:+80151736 | MS.gene75965:CDS |
| GTGGAGGAAGAGGAGGATGA+AGG | 0.479258 | 7.3:+80151784 | MS.gene75965:CDS |
| AGTGGCTGTGGCTGAGGTGG+TGG | 0.491586 | 7.3:-80151377 | None:intergenic |
| TGGAGGTCTTGAATAGGTCA+TGG | 0.494897 | 7.3:-80153831 | None:intergenic |
| AAACAATTAGGTATGCTTCA+AGG | 0.513566 | 7.3:+80153975 | MS.gene75965:CDS |
| CGCAGACCTTATAGTGGCTG+TGG | 0.517868 | 7.3:-80151389 | None:intergenic |
| AACCCGAAATTGGAAGAATC+GGG | 0.527364 | 7.3:-80151681 | None:intergenic |
| TGGTTGTGGTGGTGGTTGTG+AGG | 0.528945 | 7.3:+80151762 | MS.gene75965:CDS |
| TTAACATCATTTCAGAAAGA+GGG | 0.529345 | 7.3:-80154121 | None:intergenic |
| GGGTGGCCGGAGGACCGTAT+AGG | 0.530363 | 7.3:-80151705 | None:intergenic |
| CTTTACAAAGAAAAGCCGCC+GGG | 0.532716 | 7.3:-80151579 | None:intergenic |
| TTTGTCGGCGGTGGTTGTGG+TGG | 0.539334 | 7.3:+80151751 | MS.gene75965:CDS |
| GTGCCGCTCGGCCCCATGCG+CGG | 0.541980 | 7.3:+80151438 | MS.gene75965:CDS |
| CTGTGGCTGAGGTGGTGGTG+AGG | 0.545540 | 7.3:-80151372 | None:intergenic |
| ACCTATTCAAGACCTCCAAA+AGG | 0.546280 | 7.3:+80153836 | MS.gene75965:CDS |
| GCGCGGCAGAAAACCGCGCA+TGG | 0.548669 | 7.3:-80151451 | None:intergenic |
| CGTTGATGGCGGCTTGCAAG+AGG | 0.550196 | 7.3:-80151655 | None:intergenic |
| AACTTCTGTAATTAGTGATG+TGG | 0.558143 | 7.3:-80154083 | None:intergenic |
| CTTGTTGATTGCAATTCTTG+TGG | 0.560089 | 7.3:+80151979 | MS.gene75965:CDS |
| TCGGCACCTAAAAGGGTGGC+CGG | 0.561181 | 7.3:-80151718 | None:intergenic |
| TTGTGAGGTGGAGGAAGAGG+AGG | 0.565784 | 7.3:+80151777 | MS.gene75965:CDS |
| GTTGATTGCAATTCTTGTGG+TGG | 0.567048 | 7.3:+80151982 | MS.gene75965:CDS |
| AATAACAACAACATTAGTAA+TGG | 0.570310 | 7.3:+80151895 | MS.gene75965:CDS |
| TATAGTGGCTGTGGCTGAGG+TGG | 0.573370 | 7.3:-80151380 | None:intergenic |
| TGTTCCTGTTCAACAACAGC+AGG | 0.577069 | 7.3:+80152110 | MS.gene75965:CDS |
| AGCATGTGACACGTGCCGCT+CGG | 0.577146 | 7.3:+80151426 | MS.gene75965:CDS |
| GTTCGTGCCTCGAGGCTACA+CGG | 0.579119 | 7.3:-80151525 | None:intergenic |
| GCGGCAGAAAACCGCGCATG+GGG | 0.588981 | 7.3:-80151449 | None:intergenic |
| GCTTTACAAAGAAAAGCCGC+CGG | 0.590036 | 7.3:-80151580 | None:intergenic |
| GGGTTACCTATACGGTCCTC+CGG | 0.593643 | 7.3:+80151699 | MS.gene75965:CDS |
| ATAGAGAAGCCAAAGTCCTA+AGG | 0.594326 | 7.3:+80153918 | MS.gene75965:CDS |
| CGTTGCCGCAGACCTTATAG+TGG | 0.597128 | 7.3:-80151395 | None:intergenic |
| TATAAGGTCTGCGGCAACGT+GGG | 0.603915 | 7.3:+80151399 | MS.gene75965:CDS |
| AAACCGCGCATGGGGCCGAG+CGG | 0.610346 | 7.3:-80151441 | None:intergenic |
| ACGCGGCCGAGTTTCAGCAT+AGG | 0.616320 | 7.3:-80154002 | None:intergenic |
| TAGTAATGGTCATAATCAAG+AGG | 0.620606 | 7.3:+80151909 | MS.gene75965:CDS |
| GGAAAGCCTATGCTGAAACT+CGG | 0.623923 | 7.3:+80153996 | MS.gene75965:CDS |
| AAAGCTGGATTCAGTTACAA+TGG | 0.625769 | 7.3:+80152171 | MS.gene75965:CDS |
| AGTAATGGTCATAATCAAGA+GGG | 0.628469 | 7.3:+80151910 | MS.gene75965:CDS |
| GTTGATGGCGGCTTGCAAGA+GGG | 0.631032 | 7.3:-80151654 | None:intergenic |
| GTGGATATCAGCATCACAAG+TGG | 0.632088 | 7.3:-80151623 | None:intergenic |
| AGGCTACACGGTTTGCCGCG+TGG | 0.644154 | 7.3:-80151513 | None:intergenic |
| ATCTTCGGCACCTAAAAGGG+TGG | 0.644787 | 7.3:-80151722 | None:intergenic |
| GTGGATGCGTGCATCACACG+CGG | 0.646833 | 7.3:-80151494 | None:intergenic |
| CACAGCCACTATAAGGTCTG+CGG | 0.649656 | 7.3:+80151390 | MS.gene75965:CDS |
| CTATAAGGTCTGCGGCAACG+TGG | 0.652443 | 7.3:+80151398 | MS.gene75965:CDS |
| TTGCAAGAGGGTTAGCAGAG+TGG | 0.655218 | 7.3:-80151642 | None:intergenic |
| GAAGATGAAGGCTTTGTCGG+CGG | 0.655301 | 7.3:+80151739 | MS.gene75965:CDS |
| CACAAGAATTGCAATCAACA+AGG | 0.655647 | 7.3:-80151978 | None:intergenic |
| CGAACGCGTCTGGGTCTGTG+AGG | 0.656001 | 7.3:+80151543 | MS.gene75965:CDS |
| GCTGGATTCAGTTACAATGG+TGG | 0.656212 | 7.3:+80152174 | MS.gene75965:CDS |
| GAATCGGGACACGTTGATGG+CGG | 0.662257 | 7.3:-80151666 | None:intergenic |
| GCACCTAAAAGGGTGGCCGG+AGG | 0.665880 | 7.3:-80151715 | None:intergenic |
| GTGTGATGCACGCATCCACG+CGG | 0.684344 | 7.3:+80151498 | MS.gene75965:CDS |
| CGGCAAACCGTGTAGCCTCG+AGG | 0.686538 | 7.3:+80151518 | MS.gene75965:CDS |
| ATAAATATGCCGAATCTGCG+CGG | 0.687353 | 7.3:-80151468 | None:intergenic |
| TTTACAAAGAAAAGCCGCCG+GGG | 0.712447 | 7.3:-80151578 | None:intergenic |
| CCAGACGCGTTCGTGCCTCG+AGG | 0.721870 | 7.3:-80151533 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTGAAATATTTATCTTTAA+GGG | + | chr7.3:80153321-80153340 | MS.gene75965:intron | 10.0% |
| !! | TATTGAAATATTTATCTTTA+AGG | + | chr7.3:80153320-80153339 | MS.gene75965:intron | 10.0% |
| !! | ATATTAGTGATAAAAAAAGT+AGG | - | chr7.3:80153743-80153762 | None:intergenic | 15.0% |
| !! | TTAAAATTCATAAAGTTTGA+GGG | - | chr7.3:80152584-80152603 | None:intergenic | 15.0% |
| !! | TTACTTAAAAGTGAAAATAA+TGG | + | chr7.3:80152420-80152439 | MS.gene75965:intron | 15.0% |
| !!! | TGATTTTCTCAAATTATTAA+CGG | + | chr7.3:80152989-80153008 | MS.gene75965:intron | 15.0% |
| !!! | TTTTATGAAATTGTTGAAAA+TGG | - | chr7.3:80152829-80152848 | None:intergenic | 15.0% |
| !! | AAATACCTATTTGTAAACTA+AGG | - | chr7.3:80152644-80152663 | None:intergenic | 20.0% |
| !! | AATAACAACAACATTAGTAA+TGG | + | chr7.3:80151895-80151914 | MS.gene75965:CDS | 20.0% |
| !! | GAAAATTTGAGAAAACAATT+AGG | + | chr7.3:80153963-80153982 | MS.gene75965:CDS | 20.0% |
| !! | GTTAAAATTCATAAAGTTTG+AGG | - | chr7.3:80152585-80152604 | None:intergenic | 20.0% |
| !!! | AAGAAAAAGTGTAAAGAAAA+AGG | - | chr7.3:80153065-80153084 | None:intergenic | 20.0% |
| !!! | AATAATGGATTTTTGTTTAG+TGG | + | chr7.3:80151934-80151953 | MS.gene75965:CDS | 20.0% |
| !!! | AGAAAAAGTGTAAAGAAAAA+GGG | - | chr7.3:80153064-80153083 | None:intergenic | 20.0% |
| !!! | TATTCTAGAAAATTGATACT+TGG | - | chr7.3:80153198-80153217 | None:intergenic | 20.0% |
| !!! | TTTCATTTTCTTTTCTTATC+AGG | + | chr7.3:80153766-80153785 | MS.gene75965:intron | 20.0% |
| ! | AAAAAAGTAGGAGATATCAA+AGG | - | chr7.3:80153731-80153750 | None:intergenic | 25.0% |
| ! | CCAATAATTGTCATTCTTAT+CGG | - | chr7.3:80153649-80153668 | None:intergenic | 25.0% |
| ! | TATTTGTAAACTAAGGTTCT+GGG | - | chr7.3:80152637-80152656 | None:intergenic | 25.0% |
| ! | TCAGGTCTAATATTGTAAAT+TGG | + | chr7.3:80153468-80153487 | MS.gene75965:intron | 25.0% |
| ! | TTCAGTGTAATTATATGTGT+CGG | - | chr7.3:80152964-80152983 | None:intergenic | 25.0% |
| ! | TTTGAATTTGATATGCTTTG+TGG | + | chr7.3:80152684-80152703 | MS.gene75965:intron | 25.0% |
| !! | AATCTACAGAAGTCAATTTT+GGG | - | chr7.3:80153385-80153404 | None:intergenic | 25.0% |
| !! | GGACAAATTTTAAATCTTGT+CGG | - | chr7.3:80152463-80152482 | None:intergenic | 25.0% |
| !! | TTGTTATTGATGTTCTTTAG+AGG | - | chr7.3:80151865-80151884 | None:intergenic | 25.0% |
| !!! | TCTTTACACTTTTTCTTTAG+TGG | + | chr7.3:80153068-80153087 | MS.gene75965:intron | 25.0% |
| !!! | TTGTTTTGTTTGCAATTGTT+TGG | + | chr7.3:80152278-80152297 | MS.gene75965:intron | 25.0% |
| AAAAAGGGTAAAGAGCTATA+CGG | - | chr7.3:80153049-80153068 | None:intergenic | 30.0% | |
| AAACAATTAGGTATGCTTCA+AGG | + | chr7.3:80153975-80153994 | MS.gene75965:CDS | 30.0% | |
| AACTTCTGTAATTAGTGATG+TGG | - | chr7.3:80154086-80154105 | None:intergenic | 30.0% | |
| ACATCACTAATTACAGAAGT+TGG | + | chr7.3:80154085-80154104 | MS.gene75965:CDS | 30.0% | |
| AGTAATGGTCATAATCAAGA+GGG | + | chr7.3:80151910-80151929 | MS.gene75965:CDS | 30.0% | |
| CAACAACAACAAGATCATTA+TGG | + | chr7.3:80152054-80152073 | MS.gene75965:CDS | 30.0% | |
| CAGAACCTTAGTTTACAAAT+AGG | + | chr7.3:80152636-80152655 | MS.gene75965:intron | 30.0% | |
| CATAATCAAGAGGGTAATAA+TGG | + | chr7.3:80151919-80151938 | MS.gene75965:CDS | 30.0% | |
| CCGATAAGAATGACAATTAT+TGG | + | chr7.3:80153646-80153665 | MS.gene75965:intron | 30.0% | |
| CTAATTACAGAAGTTGGATA+TGG | + | chr7.3:80154091-80154110 | MS.gene75965:CDS | 30.0% | |
| CTATTTGTAAACTAAGGTTC+TGG | - | chr7.3:80152638-80152657 | None:intergenic | 30.0% | |
| CTCATCATGATGAGTATTAT+TGG | - | chr7.3:80152028-80152047 | None:intergenic | 30.0% | |
| GGATCGCAATATTTAAACAA+TGG | + | chr7.3:80153489-80153508 | MS.gene75965:intron | 30.0% | |
| TACTACTAAAGTGGACAAAT+CGG | + | chr7.3:80152514-80152533 | MS.gene75965:intron | 30.0% | |
| TAGTAATGGTCATAATCAAG+AGG | + | chr7.3:80151909-80151928 | MS.gene75965:CDS | 30.0% | |
| TATAAAGCTCGAATACTCAT+CGG | + | chr7.3:80152897-80152916 | MS.gene75965:intron | 30.0% | |
| TCAAACTCTTACTACTAAAG+TGG | + | chr7.3:80152505-80152524 | MS.gene75965:intron | 30.0% | |
| TCGGTAAGAACATAAATCTT+TGG | - | chr7.3:80153630-80153649 | None:intergenic | 30.0% | |
| TCTAGGAAACAGATTATGTA+GGG | - | chr7.3:80152794-80152813 | None:intergenic | 30.0% | |
| TCTCAAATTATTAACGGTGT+CGG | + | chr7.3:80152995-80153014 | MS.gene75965:intron | 30.0% | |
| TGTTTGCAATTGTTTGGAAA+GGG | + | chr7.3:80152284-80152303 | MS.gene75965:intron | 30.0% | |
| TTGTTTGCAATTGTTTGGAA+AGG | + | chr7.3:80152283-80152302 | MS.gene75965:intron | 30.0% | |
| ! | AATAGGTCAATTGTTCCTTT+TGG | - | chr7.3:80153854-80153873 | None:intergenic | 30.0% |
| ! | AGGTACAGAATTTTCAACTT+GGG | + | chr7.3:80152130-80152149 | MS.gene75965:CDS | 30.0% |
| ! | ATCTACAGAAGTCAATTTTG+GGG | - | chr7.3:80153384-80153403 | None:intergenic | 30.0% |
| ! | ATTTTAAATCTTGTCGGAGA+CGG | - | chr7.3:80152457-80152476 | None:intergenic | 30.0% |
| ! | GAATCTACAGAAGTCAATTT+TGG | - | chr7.3:80153386-80153405 | None:intergenic | 30.0% |
| !! | TGCTGTTGTTAATTTGCATT+TGG | + | chr7.3:80152758-80152777 | MS.gene75965:intron | 30.0% |
| !!! | TACACTTTTTCTTTAGTGGA+AGG | + | chr7.3:80153072-80153091 | MS.gene75965:intron | 30.0% |
| AAAGCTGGATTCAGTTACAA+TGG | + | chr7.3:80152171-80152190 | MS.gene75965:CDS | 35.0% | |
| AAGTATCATGCTTTCTTGCT+AGG | + | chr7.3:80153107-80153126 | MS.gene75965:intron | 35.0% | |
| AATGGCAAACAATCTAGTCT+AGG | - | chr7.3:80152811-80152830 | None:intergenic | 35.0% | |
| ACTCAGAGTTTACTGATAAG+TGG | + | chr7.3:80153432-80153451 | MS.gene75965:intron | 35.0% | |
| ATGAAAATGAAGCTGCTTCA+TGG | + | chr7.3:80151827-80151846 | MS.gene75965:CDS | 35.0% | |
| ATTGTAACTGAATCCAGCTT+TGG | - | chr7.3:80152172-80152191 | None:intergenic | 35.0% | |
| CACAAGAATTGCAATCAACA+AGG | - | chr7.3:80151981-80152000 | None:intergenic | 35.0% | |
| CAGTTTCAATTAGTGCTACA+TGG | + | chr7.3:80153675-80153694 | MS.gene75965:intron | 35.0% | |
| CTTGAAGCCATTTACTAGTA+CGG | + | chr7.3:80153220-80153239 | MS.gene75965:intron | 35.0% | |
| GAATAGAAGGACCTGAAAAT+AGG | - | chr7.3:80153871-80153890 | None:intergenic | 35.0% | |
| GTCTAGGAAACAGATTATGT+AGG | - | chr7.3:80152795-80152814 | None:intergenic | 35.0% | |
| GTTCCTCAAAAAAGCTATGT+GGG | + | chr7.3:80152078-80152097 | MS.gene75965:CDS | 35.0% | |
| TAACCCGAAATTGGAAGAAT+CGG | - | chr7.3:80151685-80151704 | None:intergenic | 35.0% | |
| TCAGGTTTCAGTTTCATCAA+TGG | + | chr7.3:80153784-80153803 | MS.gene75965:intron | 35.0% | |
| TCAGTTTCATCAATGGATGT+TGG | + | chr7.3:80153791-80153810 | MS.gene75965:intron | 35.0% | |
| TCTATCCATTGGAGAGAAAT+GGG | - | chr7.3:80153903-80153922 | None:intergenic | 35.0% | |
| TCTTTAGTGGAAGGAATCTA+AGG | + | chr7.3:80153081-80153100 | MS.gene75965:intron | 35.0% | |
| TGGGAAGACATTTGAATAGA+AGG | - | chr7.3:80153884-80153903 | None:intergenic | 35.0% | |
| TGTTCCTCAAAAAAGCTATG+TGG | + | chr7.3:80152077-80152096 | MS.gene75965:CDS | 35.0% | |
| TGTTGTTCCGTACTAGTAAA+TGG | - | chr7.3:80153230-80153249 | None:intergenic | 35.0% | |
| TGTTTGGAAAGGGTTGAAAT+TGG | + | chr7.3:80152294-80152313 | MS.gene75965:intron | 35.0% | |
| TTCCTCAATACCAATTCAAG+AGG | - | chr7.3:80152386-80152405 | None:intergenic | 35.0% | |
| ! | ACAAGTACAAGTAGTGTTGA+AGG | + | chr7.3:80153247-80153266 | MS.gene75965:intron | 35.0% |
| ! | ACAGAATTTTCAACTTGGGT+TGG | + | chr7.3:80152134-80152153 | MS.gene75965:CDS | 35.0% |
| ! | AGTGGACAAATCGGTATTTT+TGG | + | chr7.3:80152523-80152542 | MS.gene75965:intron | 35.0% |
| ! | CAGGTACAGAATTTTCAACT+TGG | + | chr7.3:80152129-80152148 | MS.gene75965:CDS | 35.0% |
| ! | CTTGAATTGGTATTGAGGAA+GGG | + | chr7.3:80152386-80152405 | MS.gene75965:intron | 35.0% |
| ! | CTTGTTGATTGCAATTCTTG+TGG | + | chr7.3:80151979-80151998 | MS.gene75965:CDS | 35.0% |
| ! | GGAACAATTGACCTATTTTC+AGG | + | chr7.3:80153857-80153876 | MS.gene75965:CDS | 35.0% |
| ! | TACTACAGTCACTTTGCAAT+AGG | + | chr7.3:80153527-80153546 | MS.gene75965:intron | 35.0% |
| ! | TAGCAAGAAAGCATGATACT+TGG | - | chr7.3:80153108-80153127 | None:intergenic | 35.0% |
| ! | TCTACAGAAGTCAATTTTGG+GGG | - | chr7.3:80153383-80153402 | None:intergenic | 35.0% |
| ! | TCTTGAATTGGTATTGAGGA+AGG | + | chr7.3:80152385-80152404 | MS.gene75965:intron | 35.0% |
| ! | TCTTTTTCTCTCTGTACCTT+AGG | - | chr7.3:80153937-80153956 | None:intergenic | 35.0% |
| !! | ATTTTGGGGGAATTAGATTC+TGG | - | chr7.3:80153370-80153389 | None:intergenic | 35.0% |
| !! | TGAAGGTGTTGATCATGATA+TGG | + | chr7.3:80151801-80151820 | MS.gene75965:CDS | 35.0% |
| AACCACAATTCGCGTAATTG+CGG | + | chr7.3:80152550-80152569 | MS.gene75965:intron | 40.0% | |
| AACCCGAAATTGGAAGAATC+GGG | - | chr7.3:80151684-80151703 | None:intergenic | 40.0% | |
| ACCTATTCAAGACCTCCAAA+AGG | + | chr7.3:80153836-80153855 | MS.gene75965:CDS | 40.0% | |
| AGAGGCTCAAGATCTTGAAT+TGG | - | chr7.3:80152368-80152387 | None:intergenic | 40.0% | |
| AGATCTTGAGCCTCTTGAAT+TGG | + | chr7.3:80152373-80152392 | MS.gene75965:intron | 40.0% | |
| AGCCTCTTGAATTGGTATTG+AGG | + | chr7.3:80152381-80152400 | MS.gene75965:intron | 40.0% | |
| ATAAATATGCCGAATCTGCG+CGG | - | chr7.3:80151471-80151490 | None:intergenic | 40.0% | |
| ATAGAGAAGCCAAAGTCCTA+AGG | + | chr7.3:80153918-80153937 | MS.gene75965:CDS | 40.0% | |
| CATGCTTTCTTGCTAGGAAA+CGG | + | chr7.3:80153113-80153132 | MS.gene75965:intron | 40.0% | |
| CTCTATCCATTGGAGAGAAA+TGG | - | chr7.3:80153904-80153923 | None:intergenic | 40.0% | |
| GTTGATTGCAATTCTTGTGG+TGG | + | chr7.3:80151982-80152001 | MS.gene75965:CDS | 40.0% | |
| TGTCCCGATTCTTCCAATTT+CGG | + | chr7.3:80151678-80151697 | MS.gene75965:CDS | 40.0% | |
| TTCATCTTCGGCACCTAAAA+GGG | - | chr7.3:80151728-80151747 | None:intergenic | 40.0% | |
| TTGGAAAGGGTTGAAATTGG+TGG | + | chr7.3:80152297-80152316 | MS.gene75965:intron | 40.0% | |
| ! | ACTTTGGCTTCTCTATCCAT+TGG | - | chr7.3:80153914-80153933 | None:intergenic | 40.0% |
| ! | AGGTCAATTGTTCCTTTTGG+AGG | - | chr7.3:80153851-80153870 | None:intergenic | 40.0% |
| ! | GAATAGGTCATGGTTGATTC+TGG | - | chr7.3:80153824-80153843 | None:intergenic | 40.0% |
| !! | CCAATTTCGGGTTACCTATA+CGG | + | chr7.3:80151691-80151710 | MS.gene75965:CDS | 40.0% |
| !! | TCCTTTTGGAGGTCTTGAAT+AGG | - | chr7.3:80153840-80153859 | None:intergenic | 40.0% |
| !! | TGGAGAAGTTGATGAGTACT+TGG | + | chr7.3:80151954-80151973 | MS.gene75965:CDS | 40.0% |
| !!! | TCACCCACATAGCTTTTTTG+AGG | - | chr7.3:80152084-80152103 | None:intergenic | 40.0% |
| ACAACAGCATGTCAGTCATG+TGG | - | chr7.3:80152747-80152766 | None:intergenic | 45.0% | |
| AGTGGACAAGTCACTTGTTC+AGG | + | chr7.3:80153450-80153469 | MS.gene75965:CDS | 45.0% | |
| CCGTATAGGTAACCCGAAAT+TGG | - | chr7.3:80151694-80151713 | None:intergenic | 45.0% | |
| CTCTCTGTACCTTAGGACTT+TGG | - | chr7.3:80153930-80153949 | None:intergenic | 45.0% | |
| CTTCATCTTCGGCACCTAAA+AGG | - | chr7.3:80151729-80151748 | None:intergenic | 45.0% | |
| CTTTACAAAGAAAAGCCGCC+GGG | - | chr7.3:80151582-80151601 | None:intergenic | 45.0% | |
| GAGTTTGAGTCTTCCAAAGC+TGG | + | chr7.3:80152156-80152175 | MS.gene75965:CDS | 45.0% | |
| GCTCGAATACTCATCGGATT+AGG | + | chr7.3:80152903-80152922 | MS.gene75965:intron | 45.0% | |
| GCTGGATTCAGTTACAATGG+TGG | + | chr7.3:80152174-80152193 | MS.gene75965:CDS | 45.0% | |
| GCTTTACAAAGAAAAGCCGC+CGG | - | chr7.3:80151583-80151602 | None:intergenic | 45.0% | |
| GGAAAGCCTATGCTGAAACT+CGG | + | chr7.3:80153996-80154015 | MS.gene75965:CDS | 45.0% | |
| GGTAAAGAGCTATACGGACA+CGG | - | chr7.3:80153043-80153062 | None:intergenic | 45.0% | |
| GTCCCGATTCTTCCAATTTC+GGG | + | chr7.3:80151679-80151698 | MS.gene75965:CDS | 45.0% | |
| GTCTTCCCATTTCTCTCCAA+TGG | + | chr7.3:80153895-80153914 | MS.gene75965:CDS | 45.0% | |
| GTGGATATCAGCATCACAAG+TGG | - | chr7.3:80151626-80151645 | None:intergenic | 45.0% | |
| TGGAGGTCTTGAATAGGTCA+TGG | - | chr7.3:80153834-80153853 | None:intergenic | 45.0% | |
| TGTACCTGCTGTTGTTGAAC+AGG | - | chr7.3:80152117-80152136 | None:intergenic | 45.0% | |
| TGTTCCTGTTCAACAACAGC+AGG | + | chr7.3:80152110-80152129 | MS.gene75965:CDS | 45.0% | |
| TTGGGGGAATTAGATTCTGG+AGG | - | chr7.3:80153367-80153386 | None:intergenic | 45.0% | |
| TTTACAAAGAAAAGCCGCCG+GGG | - | chr7.3:80151581-80151600 | None:intergenic | 45.0% | |
| ! | GCGAATCGACCTTTTATACG+CGG | - | chr7.3:80154022-80154041 | None:intergenic | 45.0% |
| !!! | CTTTTAGGTGCCGAAGATGA+AGG | + | chr7.3:80151727-80151746 | MS.gene75965:CDS | 45.0% |
| !! | AAAAAATTTATTATGTATAT+TGG | - | chr7.3:80153157-80153176 | None:intergenic | 5.0% |
| !! | ATTATAAATTATAATCTAAA+AGG | - | chr7.3:80152484-80152503 | None:intergenic | 5.0% |
| ATCTTCGGCACCTAAAAGGG+TGG | - | chr7.3:80151725-80151744 | None:intergenic | 50.0% | |
| CACAGCCACTATAAGGTCTG+CGG | + | chr7.3:80151390-80151409 | MS.gene75965:CDS | 50.0% | |
| CAGCATGTCAGTCATGTGGA+AGG | - | chr7.3:80152743-80152762 | None:intergenic | 50.0% | |
| CTCCGCAATTACGCGAATTG+TGG | - | chr7.3:80152555-80152574 | None:intergenic | 50.0% | |
| GAAACTCGGCCGCGTATAAA+AGG | + | chr7.3:80154010-80154029 | MS.gene75965:CDS | 50.0% | |
| GAAGAATCGGGACACGTTGA+TGG | - | chr7.3:80151672-80151691 | None:intergenic | 50.0% | |
| GCCGACAAAGCCTTCATCTT+CGG | - | chr7.3:80151740-80151759 | None:intergenic | 50.0% | |
| TATAAGGTCTGCGGCAACGT+GGG | + | chr7.3:80151399-80151418 | MS.gene75965:CDS | 50.0% | |
| ! | GAAGATGAAGGCTTTGTCGG+CGG | + | chr7.3:80151739-80151758 | MS.gene75965:CDS | 50.0% |
| ! | GCCGAAGATGAAGGCTTTGT+CGG | + | chr7.3:80151736-80151755 | MS.gene75965:CDS | 50.0% |
| ! | GGGGAATTAGATTCTGGAGG+TGG | - | chr7.3:80153364-80153383 | None:intergenic | 50.0% |
| ! | TCATCGGATTAGGCGTGTCT+CGG | + | chr7.3:80152913-80152932 | MS.gene75965:intron | 50.0% |
| ! | TTGCAAGAGGGTTAGCAGAG+TGG | - | chr7.3:80151645-80151664 | None:intergenic | 50.0% |
| !! | TATTAACGGTGTCGGCGTGT+CGG | + | chr7.3:80153003-80153022 | MS.gene75965:intron | 50.0% |
| ATACGGACACGGACACGACT+CGG | - | chr7.3:80153032-80153051 | None:intergenic | 55.0% | |
| CCTCAGCCACAGCCACTATA+AGG | + | chr7.3:80151383-80151402 | MS.gene75965:CDS | 55.0% | |
| CCTTATAGTGGCTGTGGCTG+AGG | - | chr7.3:80151386-80151405 | None:intergenic | 55.0% | |
| CGCAGACCTTATAGTGGCTG+TGG | - | chr7.3:80151392-80151411 | None:intergenic | 55.0% | |
| CGTTGCCGCAGACCTTATAG+TGG | - | chr7.3:80151398-80151417 | None:intergenic | 55.0% | |
| CTATAAGGTCTGCGGCAACG+TGG | + | chr7.3:80151398-80151417 | MS.gene75965:CDS | 55.0% | |
| GGGTTACCTATACGGTCCTC+CGG | + | chr7.3:80151699-80151718 | MS.gene75965:CDS | 55.0% | |
| GTGGAGGAAGAGGAGGATGA+AGG | + | chr7.3:80151784-80151803 | MS.gene75965:CDS | 55.0% | |
| TATAGTGGCTGTGGCTGAGG+TGG | - | chr7.3:80151383-80151402 | None:intergenic | 55.0% | |
| TGGTTGTGAGGTGGAGGAAG+AGG | + | chr7.3:80151774-80151793 | MS.gene75965:CDS | 55.0% | |
| TTGTGAGGTGGAGGAAGAGG+AGG | + | chr7.3:80151777-80151796 | MS.gene75965:CDS | 55.0% | |
| ! | GAATCGGGACACGTTGATGG+CGG | - | chr7.3:80151669-80151688 | None:intergenic | 55.0% |
| ! | GATTAGGCGTGTCTCGGTGT+CGG | + | chr7.3:80152919-80152938 | MS.gene75965:intron | 55.0% |
| ! | GGTTTTCTGCCGCGCAGATT+CGG | + | chr7.3:80151459-80151478 | MS.gene75965:CDS | 55.0% |
| !! | GTTGATGGCGGCTTGCAAGA+GGG | - | chr7.3:80151657-80151676 | None:intergenic | 55.0% |
| !! | TGGTTGTGGTGGTGGTTGTG+AGG | + | chr7.3:80151762-80151781 | MS.gene75965:CDS | 55.0% |
| !! | TTGTGGTGGTGGTTGTGAGG+TGG | + | chr7.3:80151765-80151784 | MS.gene75965:CDS | 55.0% |
| ACGCGGCCGAGTTTCAGCAT+AGG | - | chr7.3:80154005-80154024 | None:intergenic | 60.0% | |
| GTGGATGCGTGCATCACACG+CGG | - | chr7.3:80151497-80151516 | None:intergenic | 60.0% | |
| GTGTGATGCACGCATCCACG+CGG | + | chr7.3:80151498-80151517 | MS.gene75965:CDS | 60.0% | |
| GTTCGTGCCTCGAGGCTACA+CGG | - | chr7.3:80151528-80151547 | None:intergenic | 60.0% | |
| TCGGCACCTAAAAGGGTGGC+CGG | - | chr7.3:80151721-80151740 | None:intergenic | 60.0% | |
| TTTGTCGGCGGTGGTTGTGG+TGG | + | chr7.3:80151751-80151770 | MS.gene75965:CDS | 60.0% | |
| ! | AGCATGTGACACGTGCCGCT+CGG | + | chr7.3:80151426-80151445 | MS.gene75965:CDS | 60.0% |
| ! | GATGAAGGCTTTGTCGGCGG+TGG | + | chr7.3:80151742-80151761 | MS.gene75965:CDS | 60.0% |
| !! | CGTTGATGGCGGCTTGCAAG+AGG | - | chr7.3:80151658-80151677 | None:intergenic | 60.0% |
| !! | TGGTGGTGGTTGTGAGGTGG+AGG | + | chr7.3:80151768-80151787 | MS.gene75965:CDS | 60.0% |
| AGGCTACACGGTTTGCCGCG+TGG | - | chr7.3:80151516-80151535 | None:intergenic | 65.0% | |
| AGTGGCTGTGGCTGAGGTGG+TGG | - | chr7.3:80151380-80151399 | None:intergenic | 65.0% | |
| CGAACGCGTCTGGGTCTGTG+AGG | + | chr7.3:80151543-80151562 | MS.gene75965:CDS | 65.0% | |
| CGCGGCAGAAAACCGCGCAT+GGG | - | chr7.3:80151453-80151472 | None:intergenic | 65.0% | |
| CGGCAAACCGTGTAGCCTCG+AGG | + | chr7.3:80151518-80151537 | MS.gene75965:CDS | 65.0% | |
| CTCGAGGCACGAACGCGTCT+GGG | + | chr7.3:80151534-80151553 | MS.gene75965:CDS | 65.0% | |
| GCACCTAAAAGGGTGGCCGG+AGG | - | chr7.3:80151718-80151737 | None:intergenic | 65.0% | |
| GCGGCAGAAAACCGCGCATG+GGG | - | chr7.3:80151452-80151471 | None:intergenic | 65.0% | |
| ! | CTGTGGCTGAGGTGGTGGTG+AGG | - | chr7.3:80151375-80151394 | None:intergenic | 65.0% |
| ! | GGCTTTGTCGGCGGTGGTTG+TGG | + | chr7.3:80151748-80151767 | MS.gene75965:CDS | 65.0% |
| ! | GGTCCTCCGGCCACCCTTTT+AGG | + | chr7.3:80151712-80151731 | MS.gene75965:CDS | 65.0% |
| AAACCGCGCATGGGGCCGAG+CGG | - | chr7.3:80151444-80151463 | None:intergenic | 70.0% | |
| CCAGACGCGTTCGTGCCTCG+AGG | - | chr7.3:80151536-80151555 | None:intergenic | 70.0% | |
| CCTCGAGGCACGAACGCGTC+TGG | + | chr7.3:80151533-80151552 | MS.gene75965:CDS | 70.0% | |
| GCGCGGCAGAAAACCGCGCA+TGG | - | chr7.3:80151454-80151473 | None:intergenic | 70.0% | |
| GGGTGGCCGGAGGACCGTAT+AGG | - | chr7.3:80151708-80151727 | None:intergenic | 70.0% | |
| GTCGGCGGTGGTTGTGGTGG+TGG | + | chr7.3:80151754-80151773 | MS.gene75965:CDS | 70.0% | |
| TGAGGCCTGCGAGCGTGCCC+CGG | + | chr7.3:80151561-80151580 | MS.gene75965:CDS | 75.0% | |
| !! | GTGCCGCTCGGCCCCATGCG+CGG | + | chr7.3:80151438-80151457 | MS.gene75965:CDS | 80.0% |
| ! | AGCCGCCGGGGCACGCTCGC+AGG | - | chr7.3:80151569-80151588 | None:intergenic | 85.0% |
| ! | GGCCTGCGAGCGTGCCCCGG+CGG | + | chr7.3:80151564-80151583 | MS.gene75965:CDS | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.3 | gene | 80151355 | 80154132 | 80151355 | ID=MS.gene75965 |
| chr7.3 | mRNA | 80151355 | 80154132 | 80151355 | ID=MS.gene75965.t1;Parent=MS.gene75965 |
| chr7.3 | exon | 80151355 | 80152212 | 80151355 | ID=MS.gene75965.t1.exon1;Parent=MS.gene75965.t1 |
| chr7.3 | CDS | 80151355 | 80152212 | 80151355 | ID=cds.MS.gene75965.t1;Parent=MS.gene75965.t1 |
| chr7.3 | exon | 80153438 | 80153471 | 80153438 | ID=MS.gene75965.t1.exon2;Parent=MS.gene75965.t1 |
| chr7.3 | CDS | 80153438 | 80153471 | 80153438 | ID=cds.MS.gene75965.t1;Parent=MS.gene75965.t1 |
| chr7.3 | exon | 80153825 | 80154132 | 80153825 | ID=MS.gene75965.t1.exon3;Parent=MS.gene75965.t1 |
| chr7.3 | CDS | 80153825 | 80154132 | 80153825 | ID=cds.MS.gene75965.t1;Parent=MS.gene75965.t1 |
| Gene Sequence |
| Protein sequence |
