Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene62915.t1 | XP_013447714.1 | 85.4 | 403 | 49 | 4 | 1 | 400 | 1 | 396 | 2.10E-114 | 422.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene62915.t1 | Q96502 | 49.4 | 399 | 125 | 9 | 19 | 400 | 9 | 347 | 4.8e-51 | 203.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene62915.t1 | A0A072TWC7 | 85.4 | 403 | 49 | 4 | 1 | 400 | 1 | 396 | 1.5e-114 | 422.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene62915.t1 | TF | C2C2-CO-like |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049232 | MS.gene62915 | 0.861489 | 9.90E-64 | -1.69E-46 |
| MS.gene049320 | MS.gene62915 | 0.829047 | 6.40E-55 | -1.69E-46 |
| MS.gene049600 | MS.gene62915 | 0.858151 | 1.00E-62 | -1.69E-46 |
| MS.gene05010 | MS.gene62915 | 0.834031 | 3.79E-56 | -1.69E-46 |
| MS.gene050216 | MS.gene62915 | 0.855049 | 8.19E-62 | -1.69E-46 |
| MS.gene050323 | MS.gene62915 | 0.815523 | 8.85E-52 | -1.69E-46 |
| MS.gene050502 | MS.gene62915 | 0.808518 | 2.98E-50 | -1.69E-46 |
| MS.gene050504 | MS.gene62915 | 0.827889 | 1.22E-54 | -1.69E-46 |
| MS.gene050518 | MS.gene62915 | 0.822179 | 2.72E-53 | -1.69E-46 |
| MS.gene050612 | MS.gene62915 | 0.831541 | 1.57E-55 | -1.69E-46 |
| MS.gene050675 | MS.gene62915 | 0.807632 | 4.60E-50 | -1.69E-46 |
| MS.gene050868 | MS.gene62915 | 0.827385 | 1.61E-54 | -1.69E-46 |
| MS.gene050871 | MS.gene62915 | 0.831878 | 1.30E-55 | -1.69E-46 |
| MS.gene050986 | MS.gene62915 | 0.834941 | 2.24E-56 | -1.69E-46 |
| MS.gene05118 | MS.gene62915 | 0.833226 | 6.02E-56 | -1.69E-46 |
| MS.gene051509 | MS.gene62915 | 0.900063 | 1.06E-77 | -1.69E-46 |
| MS.gene051551 | MS.gene62915 | 0.804712 | 1.89E-49 | -1.69E-46 |
| MS.gene052066 | MS.gene62915 | 0.816093 | 6.61E-52 | -1.69E-46 |
| MS.gene053633 | MS.gene62915 | 0.803013 | 4.27E-49 | -1.69E-46 |
| MS.gene054954 | MS.gene62915 | 0.816157 | 6.39E-52 | -1.69E-46 |
| MS.gene055750 | MS.gene62915 | 0.818618 | 1.78E-52 | -1.69E-46 |
| MS.gene055751 | MS.gene62915 | 0.806277 | 8.90E-50 | -1.69E-46 |
| MS.gene055776 | MS.gene62915 | 0.868909 | 4.60E-66 | -1.69E-46 |
| MS.gene056504 | MS.gene62915 | 0.844128 | 9.16E-59 | -1.69E-46 |
| MS.gene056510 | MS.gene62915 | 0.823873 | 1.10E-53 | -1.69E-46 |
| MS.gene056657 | MS.gene62915 | 0.826209 | 3.08E-54 | -1.69E-46 |
| MS.gene056878 | MS.gene62915 | 0.804827 | 1.79E-49 | -1.69E-46 |
| MS.gene058041 | MS.gene62915 | 0.803739 | 3.02E-49 | -1.69E-46 |
| MS.gene058171 | MS.gene62915 | -0.803856 | 2.85E-49 | -1.69E-46 |
| MS.gene058175 | MS.gene62915 | -0.804311 | 2.30E-49 | -1.69E-46 |
| MS.gene058459 | MS.gene62915 | 0.835369 | 1.75E-56 | -1.69E-46 |
| MS.gene059022 | MS.gene62915 | 0.805793 | 1.12E-49 | -1.69E-46 |
| MS.gene059045 | MS.gene62915 | -0.815531 | 8.82E-52 | -1.69E-46 |
| MS.gene05913 | MS.gene62915 | 0.80966 | 1.70E-50 | -1.69E-46 |
| MS.gene059367 | MS.gene62915 | 0.847884 | 8.72E-60 | -1.69E-46 |
| MS.gene059865 | MS.gene62915 | 0.871428 | 6.89E-67 | -1.69E-46 |
| MS.gene060482 | MS.gene62915 | 0.814458 | 1.52E-51 | -1.69E-46 |
| MS.gene060778 | MS.gene62915 | 0.83837 | 2.99E-57 | -1.69E-46 |
| MS.gene06097 | MS.gene62915 | 0.821251 | 4.46E-53 | -1.69E-46 |
| MS.gene060982 | MS.gene62915 | 0.819651 | 1.04E-52 | -1.69E-46 |
| MS.gene061134 | MS.gene62915 | 0.809594 | 1.75E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene75965 | MS.gene62915 | PPI |
| MS.gene018362 | MS.gene62915 | PPI |
| MS.gene035678 | MS.gene62915 | PPI |
| MS.gene022048 | MS.gene62915 | PPI |
| MS.gene57909 | MS.gene62915 | PPI |
| MS.gene44781 | MS.gene62915 | PPI |
| MS.gene62915 | MS.gene75965 | PPI |
| MS.gene012430 | MS.gene62915 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene62915.t1 | MTR_7g018170 | 91.563 | 403 | 24 | 5 | 1 | 400 | 1 | 396 | 0.0 | 625 |
| MS.gene62915.t1 | MTR_4g128930 | 38.443 | 411 | 164 | 14 | 24 | 400 | 20 | 375 | 5.50e-75 | 238 |
| MS.gene62915.t1 | MTR_1g013450 | 37.403 | 385 | 159 | 12 | 24 | 399 | 4 | 315 | 1.38e-68 | 219 |
| MS.gene62915.t1 | MTR_3g105710 | 37.306 | 386 | 134 | 11 | 23 | 399 | 3 | 289 | 3.78e-65 | 210 |
| MS.gene62915.t1 | MTR_4g067320 | 43.478 | 92 | 43 | 1 | 26 | 108 | 5 | 96 | 2.21e-18 | 84.3 |
| MS.gene62915.t1 | MTR_4g067320 | 39.474 | 76 | 40 | 1 | 69 | 138 | 5 | 80 | 4.61e-11 | 62.8 |
| MS.gene62915.t1 | MTR_4g067320 | 43.478 | 92 | 43 | 1 | 26 | 108 | 5 | 96 | 2.24e-18 | 84.0 |
| MS.gene62915.t1 | MTR_4g067320 | 39.474 | 76 | 40 | 1 | 69 | 138 | 5 | 80 | 4.82e-11 | 62.8 |
| MS.gene62915.t1 | MTR_1g023260 | 41.935 | 93 | 44 | 1 | 26 | 108 | 5 | 97 | 8.54e-18 | 83.2 |
| MS.gene62915.t1 | MTR_5g021580 | 48.750 | 80 | 33 | 1 | 26 | 97 | 5 | 84 | 8.99e-18 | 81.3 |
| MS.gene62915.t1 | MTR_5g021580 | 48.750 | 80 | 33 | 1 | 26 | 97 | 5 | 84 | 9.07e-18 | 81.3 |
| MS.gene62915.t1 | MTR_1g023260 | 41.935 | 93 | 44 | 1 | 26 | 108 | 5 | 97 | 1.17e-17 | 80.9 |
| MS.gene62915.t1 | MTR_5g069480 | 42.857 | 91 | 52 | 0 | 26 | 116 | 5 | 95 | 2.58e-17 | 82.0 |
| MS.gene62915.t1 | MTR_5g069480 | 42.857 | 91 | 52 | 0 | 26 | 116 | 5 | 95 | 3.52e-17 | 83.2 |
| MS.gene62915.t1 | MTR_2g073370 | 43.478 | 92 | 43 | 1 | 26 | 108 | 5 | 96 | 3.73e-17 | 81.6 |
| MS.gene62915.t1 | MTR_7g108150 | 35.088 | 114 | 66 | 3 | 23 | 132 | 17 | 126 | 6.74e-17 | 82.0 |
| MS.gene62915.t1 | MTR_2g099010 | 40.217 | 92 | 46 | 1 | 26 | 108 | 5 | 96 | 2.00e-16 | 78.6 |
| MS.gene62915.t1 | MTR_2g099010 | 50.000 | 50 | 25 | 0 | 69 | 118 | 5 | 54 | 8.01e-11 | 62.4 |
| MS.gene62915.t1 | MTR_2g099010 | 40.217 | 92 | 46 | 1 | 26 | 108 | 5 | 96 | 2.19e-16 | 78.6 |
| MS.gene62915.t1 | MTR_2g099010 | 50.000 | 50 | 25 | 0 | 69 | 118 | 5 | 54 | 8.61e-11 | 62.0 |
| MS.gene62915.t1 | MTR_3g113070 | 33.333 | 111 | 63 | 1 | 26 | 125 | 5 | 115 | 4.03e-15 | 74.3 |
| MS.gene62915.t1 | MTR_4g071200 | 38.710 | 93 | 47 | 1 | 26 | 108 | 5 | 97 | 1.86e-14 | 72.4 |
| MS.gene62915.t1 | MTR_3g082630 | 41.758 | 91 | 52 | 1 | 26 | 116 | 5 | 94 | 3.61e-14 | 73.9 |
| MS.gene62915.t1 | MTR_3g117320 | 36.559 | 93 | 49 | 1 | 26 | 108 | 5 | 97 | 2.14e-13 | 69.7 |
| MS.gene62915.t1 | MTR_8g104190 | 32.979 | 188 | 91 | 5 | 204 | 374 | 232 | 401 | 8.66e-13 | 69.7 |
| MS.gene62915.t1 | MTR_1g109350 | 37.838 | 74 | 46 | 0 | 24 | 97 | 3 | 76 | 1.86e-11 | 65.5 |
| MS.gene62915.t1 | MTR_2g088900 | 35.165 | 91 | 59 | 0 | 16 | 106 | 91 | 181 | 3.36e-11 | 65.1 |
| MS.gene62915.t1 | MTR_1g110870 | 69.767 | 43 | 13 | 0 | 331 | 373 | 382 | 424 | 4.33e-11 | 64.7 |
| MS.gene62915.t1 | MTR_7g083540 | 68.293 | 41 | 13 | 0 | 335 | 375 | 345 | 385 | 4.89e-11 | 64.3 |
| MS.gene62915.t1 | MTR_3g034680 | 47.368 | 57 | 25 | 1 | 58 | 114 | 4 | 55 | 5.50e-11 | 59.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene62915.t1 | AT3G02380 | 53.634 | 399 | 108 | 11 | 19 | 400 | 9 | 347 | 5.87e-124 | 362 |
| MS.gene62915.t1 | AT5G15840 | 50.633 | 395 | 140 | 13 | 23 | 400 | 17 | 373 | 3.48e-110 | 328 |
| MS.gene62915.t1 | AT5G15850 | 50.000 | 402 | 136 | 9 | 16 | 400 | 2 | 355 | 1.92e-108 | 323 |
| MS.gene62915.t1 | AT5G24930 | 40.302 | 397 | 181 | 11 | 23 | 400 | 3 | 362 | 2.56e-73 | 233 |
| MS.gene62915.t1 | AT5G57660 | 42.025 | 395 | 154 | 15 | 23 | 400 | 19 | 355 | 3.49e-72 | 230 |
| MS.gene62915.t1 | AT2G24790 | 39.011 | 364 | 122 | 13 | 20 | 375 | 2 | 273 | 5.47e-67 | 214 |
| MS.gene62915.t1 | AT5G15840 | 47.482 | 278 | 101 | 9 | 23 | 291 | 17 | 258 | 5.48e-63 | 204 |
| MS.gene62915.t1 | AT2G24790 | 42.857 | 182 | 78 | 5 | 20 | 198 | 2 | 160 | 5.98e-41 | 144 |
| MS.gene62915.t1 | AT5G48250 | 28.723 | 376 | 216 | 13 | 26 | 372 | 5 | 357 | 3.49e-24 | 103 |
| MS.gene62915.t1 | AT1G78600 | 44.565 | 92 | 42 | 1 | 26 | 108 | 5 | 96 | 2.14e-18 | 85.9 |
| MS.gene62915.t1 | AT1G78600 | 44.565 | 92 | 42 | 1 | 26 | 108 | 5 | 96 | 2.23e-18 | 85.5 |
| MS.gene62915.t1 | AT1G06040 | 43.478 | 92 | 43 | 1 | 26 | 108 | 5 | 96 | 3.20e-17 | 81.3 |
| MS.gene62915.t1 | AT2G21320 | 47.500 | 80 | 34 | 1 | 26 | 97 | 5 | 84 | 5.45e-17 | 78.6 |
| MS.gene62915.t1 | AT2G47890 | 34.211 | 114 | 73 | 1 | 24 | 137 | 11 | 122 | 8.41e-17 | 80.9 |
| MS.gene62915.t1 | AT1G06040 | 43.478 | 92 | 43 | 1 | 26 | 108 | 5 | 96 | 9.57e-17 | 78.2 |
| MS.gene62915.t1 | AT2G47890 | 38.710 | 93 | 55 | 1 | 24 | 116 | 11 | 101 | 1.27e-16 | 80.9 |
| MS.gene62915.t1 | AT2G47890 | 38.710 | 93 | 55 | 1 | 24 | 116 | 11 | 101 | 1.34e-16 | 79.0 |
| MS.gene62915.t1 | AT4G38960 | 45.000 | 80 | 36 | 1 | 26 | 97 | 5 | 84 | 1.51e-16 | 77.8 |
| MS.gene62915.t1 | AT4G38960 | 45.000 | 80 | 36 | 1 | 26 | 97 | 5 | 84 | 1.51e-16 | 77.8 |
| MS.gene62915.t1 | AT3G21880 | 26.357 | 387 | 208 | 13 | 26 | 375 | 5 | 351 | 3.42e-16 | 79.7 |
| MS.gene62915.t1 | AT3G21880 | 26.357 | 387 | 208 | 13 | 26 | 375 | 9 | 355 | 3.52e-16 | 79.7 |
| MS.gene62915.t1 | AT3G21880 | 26.357 | 387 | 208 | 13 | 26 | 375 | 9 | 355 | 3.52e-16 | 79.7 |
| MS.gene62915.t1 | AT2G33500 | 34.127 | 126 | 75 | 2 | 25 | 150 | 11 | 128 | 5.23e-16 | 79.7 |
| MS.gene62915.t1 | AT2G33500 | 63.043 | 46 | 17 | 0 | 330 | 375 | 355 | 400 | 1.34e-11 | 66.2 |
| MS.gene62915.t1 | AT2G33500 | 34.127 | 126 | 75 | 2 | 25 | 150 | 11 | 128 | 5.31e-16 | 79.7 |
| MS.gene62915.t1 | AT2G33500 | 63.043 | 46 | 17 | 0 | 330 | 375 | 356 | 401 | 1.36e-11 | 66.2 |
| MS.gene62915.t1 | AT2G31380 | 40.217 | 92 | 46 | 1 | 26 | 108 | 5 | 96 | 8.18e-16 | 77.0 |
| MS.gene62915.t1 | AT1G75540 | 37.895 | 95 | 47 | 1 | 26 | 108 | 5 | 99 | 1.24e-15 | 77.8 |
| MS.gene62915.t1 | AT1G28050 | 35.922 | 103 | 63 | 1 | 26 | 128 | 9 | 108 | 1.75e-14 | 75.1 |
| MS.gene62915.t1 | AT1G73870 | 68.085 | 47 | 15 | 0 | 330 | 376 | 344 | 390 | 8.98e-13 | 69.7 |
| MS.gene62915.t1 | AT3G07650 | 43.056 | 72 | 41 | 0 | 26 | 97 | 5 | 76 | 1.15e-12 | 69.3 |
| MS.gene62915.t1 | AT3G07650 | 43.056 | 72 | 41 | 0 | 26 | 97 | 5 | 76 | 1.15e-12 | 69.3 |
| MS.gene62915.t1 | AT3G07650 | 43.056 | 72 | 41 | 0 | 26 | 97 | 5 | 76 | 1.15e-12 | 69.3 |
| MS.gene62915.t1 | AT3G07650 | 43.056 | 72 | 41 | 0 | 26 | 97 | 5 | 76 | 1.15e-12 | 69.3 |
| MS.gene62915.t1 | AT1G68190 | 34.000 | 100 | 61 | 2 | 24 | 123 | 41 | 135 | 1.29e-12 | 69.3 |
| MS.gene62915.t1 | AT1G68190 | 34.000 | 100 | 61 | 2 | 24 | 123 | 12 | 106 | 1.67e-12 | 68.6 |
| MS.gene62915.t1 | AT1G68190 | 34.000 | 100 | 61 | 2 | 24 | 123 | 12 | 106 | 1.67e-12 | 68.6 |
| MS.gene62915.t1 | AT4G15250 | 35.714 | 84 | 54 | 0 | 26 | 109 | 5 | 88 | 3.58e-12 | 67.4 |
| MS.gene62915.t1 | AT1G25440 | 34.722 | 144 | 56 | 4 | 250 | 373 | 278 | 403 | 3.68e-12 | 67.8 |
| MS.gene62915.t1 | AT4G10240 | 34.694 | 98 | 45 | 2 | 26 | 108 | 5 | 98 | 6.06e-12 | 63.9 |
| MS.gene62915.t1 | AT1G68520 | 65.217 | 46 | 16 | 0 | 331 | 376 | 357 | 402 | 1.33e-11 | 66.2 |
| MS.gene62915.t1 | AT4G39070 | 36.559 | 93 | 49 | 1 | 26 | 108 | 5 | 97 | 4.64e-11 | 63.2 |
| MS.gene62915.t1 | AT5G14370 | 47.619 | 63 | 33 | 0 | 313 | 375 | 276 | 338 | 5.54e-11 | 63.9 |
Find 105 sgRNAs with CRISPR-Local
Find 255 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTCCCGATTCTTCCAATTTC+CGG | 0.213967 | 7.2:+79559574 | MS.gene62915:CDS |
| CTCATCATGATGAGTATTAT+TGG | 0.214592 | 7.2:-79559920 | None:intergenic |
| CTTCATCTTCGGCACCTAAA+AGG | 0.221370 | 7.2:-79559621 | None:intergenic |
| CCAATTTCCGGTTACCTTTA+CGG | 0.243807 | 7.2:+79559586 | MS.gene62915:CDS |
| AATAGGTCAATTGTTCCTTT+TGG | 0.257022 | 7.2:-79562195 | None:intergenic |
| CCTCGAGGCACGAACGCGTC+TGG | 0.290131 | 7.2:+79559428 | MS.gene62915:CDS |
| GAAACTCGGCCGCGTATAAA+AGG | 0.298232 | 7.2:+79562354 | MS.gene62915:CDS |
| CCACGTTGCCGCAGACCTTA+TGG | 0.314996 | 7.2:-79559293 | None:intergenic |
| TTGTTATTGATGTTCTTTAG+AGG | 0.325161 | 7.2:-79559757 | None:intergenic |
| ATGAAAATGAAGCTGCTTCA+TGG | 0.340820 | 7.2:+79559722 | MS.gene62915:CDS |
| CTCTATCCATTGGAGAGAAA+TGG | 0.342666 | 7.2:-79562245 | None:intergenic |
| GAAAATTTGAGAAAACAATT+AGG | 0.345101 | 7.2:+79562307 | MS.gene62915:CDS |
| AGCCGCCGGGGCACGCTCGC+AGG | 0.350184 | 7.2:-79559461 | None:intergenic |
| CATAATCAAGAGGGTAATAA+TGG | 0.353323 | 7.2:+79559814 | MS.gene62915:CDS |
| GGCTTTGTCGGCGGTGGTTG+CGG | 0.358641 | 7.2:+79559643 | MS.gene62915:CDS |
| CAACAACAACAAGATCATTA+TGG | 0.359775 | 7.2:+79559952 | MS.gene62915:CDS |
| TTTAACATCATTTCAGAAAG+AGG | 0.365033 | 7.2:-79562466 | None:intergenic |
| CTAATTACAGAAGTTGGATA+TGG | 0.366492 | 7.2:+79562435 | MS.gene62915:CDS |
| TGGGAAGACATTTGAATAGA+AGG | 0.383605 | 7.2:-79562225 | None:intergenic |
| AGTGGACAAGTCACTTGTTC+AGG | 0.385352 | 7.2:+79561795 | MS.gene62915:CDS |
| CCGTAAAGGTAACCGGAAAT+TGG | 0.390811 | 7.2:-79559586 | None:intergenic |
| GTCGGCGGTGGTTGCGGTGG+CGG | 0.397594 | 7.2:+79559649 | MS.gene62915:CDS |
| GAATAGAAGGACCTGAAAAT+AGG | 0.406008 | 7.2:-79562212 | None:intergenic |
| TAACCGGAAATTGGAAGAAT+CGG | 0.415877 | 7.2:-79559577 | None:intergenic |
| GAGTTTGAGTCTTCCAAAGC+TGG | 0.426808 | 7.2:+79560054 | MS.gene62915:CDS |
| GGTGGCTGTGGCTGAGGTGG+TGG | 0.428121 | 7.2:-79559272 | None:intergenic |
| GAAGAATCGGGACACGTTGA+TGG | 0.431550 | 7.2:-79559564 | None:intergenic |
| CCTTATGGTGGCTGTGGCTG+AGG | 0.436720 | 7.2:-79559278 | None:intergenic |
| GGCACCTAAAAGGGTGGCCG+GGG | 0.437460 | 7.2:-79559611 | None:intergenic |
| ATTGTAACTGAATCCAGCTT+TGG | 0.441148 | 7.2:-79560067 | None:intergenic |
| TGTACCTGCTGTTGTTGAAC+AGG | 0.442029 | 7.2:-79560012 | None:intergenic |
| TGAAGGTGTTGATCATGATA+TGG | 0.443702 | 7.2:+79559696 | MS.gene62915:CDS |
| GATGAAGGCTTTGTCGGCGG+TGG | 0.445280 | 7.2:+79559637 | MS.gene62915:CDS |
| TCTATCCATTGGAGAGAAAT+GGG | 0.447374 | 7.2:-79562244 | None:intergenic |
| GTCTTCCCATTTCTCTCCAA+TGG | 0.450964 | 7.2:+79562239 | MS.gene62915:CDS |
| ACATCACTAATTACAGAAGT+TGG | 0.453991 | 7.2:+79562429 | MS.gene62915:CDS |
| CGCGGCAGAAAACCGCGCAT+GGG | 0.457653 | 7.2:-79559345 | None:intergenic |
| TTCATCTTCGGCACCTAAAA+GGG | 0.458034 | 7.2:-79559620 | None:intergenic |
| GGCCTGCGAGCGTGCCCCGG+CGG | 0.459298 | 7.2:+79559459 | MS.gene62915:CDS |
| GCCGACAAAGCCTTCATCTT+CGG | 0.465052 | 7.2:-79559632 | None:intergenic |
| TGAGGCCTGCGAGCGTGCCC+CGG | 0.465827 | 7.2:+79559456 | MS.gene62915:CDS |
| CTCGAGGCACGAACGCGTCT+GGG | 0.468750 | 7.2:+79559429 | MS.gene62915:CDS |
| TGGAGAAGTTGATGAGTACT+TGG | 0.471287 | 7.2:+79559849 | MS.gene62915:CDS |
| ACTCAGAGTTTACTGATAAG+TGG | 0.476306 | 7.2:+79561777 | MS.gene62915:intron |
| GCCGAAGATGAAGGCTTTGT+CGG | 0.477058 | 7.2:+79559631 | MS.gene62915:CDS |
| ACTCTTGCTTCTCTATCCAT+TGG | 0.478486 | 7.2:-79562255 | None:intergenic |
| GTGGAAGAAGAGGAGGATGA+AGG | 0.479258 | 7.2:+79559679 | MS.gene62915:CDS |
| CGGCACCTAAAAGGGTGGCC+GGG | 0.479998 | 7.2:-79559612 | None:intergenic |
| TTGCGGTGGCGGCTGTGAGG+TGG | 0.489296 | 7.2:+79559660 | MS.gene62915:CDS |
| TCGGCACCTAAAAGGGTGGC+CGG | 0.494213 | 7.2:-79559613 | None:intergenic |
| TGGAGGTCTTGAATAGGTCA+TGG | 0.494897 | 7.2:-79562175 | None:intergenic |
| CGCAGACCTTATGGTGGCTG+TGG | 0.501654 | 7.2:-79559284 | None:intergenic |
| AAACAATTAGGTATGCTTCA+AGG | 0.513566 | 7.2:+79562319 | MS.gene62915:CDS |
| CCTCAGCCACAGCCACCATA+AGG | 0.513892 | 7.2:+79559278 | MS.gene62915:CDS |
| AACCGGAAATTGGAAGAATC+GGG | 0.527364 | 7.2:-79559576 | None:intergenic |
| TTAACATCATTTCAGAAAGA+GGG | 0.529345 | 7.2:-79562465 | None:intergenic |
| CTTTACAAAGAAAAGCCGCC+GGG | 0.532716 | 7.2:-79559474 | None:intergenic |
| TATGGTGGCTGTGGCTGAGG+TGG | 0.539082 | 7.2:-79559275 | None:intergenic |
| GTGCCGCTCGGCCCCATGCG+CGG | 0.541980 | 7.2:+79559333 | MS.gene62915:CDS |
| CGGTTACCTTTACGGTCCCC+CGG | 0.545256 | 7.2:+79559594 | MS.gene62915:CDS |
| CTGTGGCTGAGGTGGTGGTG+AGG | 0.545540 | 7.2:-79559267 | None:intergenic |
| TTTGTCGGCGGTGGTTGCGG+TGG | 0.546188 | 7.2:+79559646 | MS.gene62915:CDS |
| ACCTATTCAAGACCTCCAAA+AGG | 0.546280 | 7.2:+79562180 | MS.gene62915:CDS |
| CGTTGATGGCGGCTTGCAAG+AGG | 0.550196 | 7.2:-79559550 | None:intergenic |
| AACTTCTGTAATTAGTGATG+TGG | 0.558143 | 7.2:-79562427 | None:intergenic |
| GCGCGGCAGAAAACCGCGCA+TGG | 0.558424 | 7.2:-79559346 | None:intergenic |
| CTTGTTGATTGCAATTCTTG+TGG | 0.560089 | 7.2:+79559874 | MS.gene62915:CDS |
| TGGTTGCGGTGGCGGCTGTG+AGG | 0.566153 | 7.2:+79559657 | MS.gene62915:CDS |
| CGGCTGTGAGGTGGAAGAAG+AGG | 0.566525 | 7.2:+79559669 | MS.gene62915:CDS |
| GTTGATTGCAATTCTTGTGG+TGG | 0.567048 | 7.2:+79559877 | MS.gene62915:CDS |
| CATAAGGTCTGCGGCAACGT+GGG | 0.569294 | 7.2:+79559294 | MS.gene62915:CDS |
| TGTTCCTGTTCAACAACAGC+AGG | 0.577069 | 7.2:+79560008 | MS.gene62915:CDS |
| AGCATGTGACACGTGCCGCT+CGG | 0.577146 | 7.2:+79559321 | MS.gene62915:CDS |
| ATAGAGAAGCAAGAGTCCTA+AGG | 0.578755 | 7.2:+79562262 | MS.gene62915:CDS |
| GTTCGTGCCTCGAGGCTACA+CGG | 0.579119 | 7.2:-79559420 | None:intergenic |
| GCGGCAGAAAACCGCGCATG+GGG | 0.588981 | 7.2:-79559344 | None:intergenic |
| GCTTTACAAAGAAAAGCCGC+CGG | 0.590036 | 7.2:-79559475 | None:intergenic |
| AATAACAACAACATTAGCAA+TGG | 0.607541 | 7.2:+79559790 | MS.gene62915:CDS |
| AAACCGCGCATGGGGCCGAG+CGG | 0.610346 | 7.2:-79559336 | None:intergenic |
| CTGTGAGGTGGAAGAAGAGG+AGG | 0.610586 | 7.2:+79559672 | MS.gene62915:CDS |
| TAGCAATGGTCATAATCAAG+AGG | 0.613653 | 7.2:+79559804 | MS.gene62915:CDS |
| ACGCGGCCGAGTTTCAGCAT+AGG | 0.616320 | 7.2:-79562346 | None:intergenic |
| CCATAAGGTCTGCGGCAACG+TGG | 0.618452 | 7.2:+79559293 | MS.gene62915:CDS |
| GTGGATGCGTGCATCACAAG+CGG | 0.620677 | 7.2:-79559389 | None:intergenic |
| GGAAAGCCTATGCTGAAACT+CGG | 0.623923 | 7.2:+79562340 | MS.gene62915:CDS |
| AAAGCTGGATTCAGTTACAA+TGG | 0.625769 | 7.2:+79560069 | MS.gene62915:CDS |
| AGCAATGGTCATAATCAAGA+GGG | 0.627143 | 7.2:+79559805 | MS.gene62915:CDS |
| CACAGCCACCATAAGGTCTG+CGG | 0.627512 | 7.2:+79559285 | MS.gene62915:CDS |
| GCACCTAAAAGGGTGGCCGG+GGG | 0.630323 | 7.2:-79559610 | None:intergenic |
| GTTGATGGCGGCTTGCAAGA+GGG | 0.631032 | 7.2:-79559549 | None:intergenic |
| GTGGATATCAGCATCACAAG+TGG | 0.632088 | 7.2:-79559518 | None:intergenic |
| AGGCTACACGGTTTGCCGCG+TGG | 0.644154 | 7.2:-79559408 | None:intergenic |
| ATCTTCGGCACCTAAAAGGG+TGG | 0.644787 | 7.2:-79559617 | None:intergenic |
| ATAAATATGCCGAGTCTGCG+CGG | 0.648190 | 7.2:-79559363 | None:intergenic |
| TTGCAAGAGGGTTAGCAGAG+TGG | 0.655218 | 7.2:-79559537 | None:intergenic |
| GAAGATGAAGGCTTTGTCGG+CGG | 0.655301 | 7.2:+79559634 | MS.gene62915:CDS |
| CACAAGAATTGCAATCAACA+AGG | 0.655647 | 7.2:-79559873 | None:intergenic |
| CGAACGCGTCTGGGTCTGTG+AGG | 0.656001 | 7.2:+79559438 | MS.gene62915:CDS |
| GCTGGATTCAGTTACAATGG+TGG | 0.656212 | 7.2:+79560072 | MS.gene62915:CDS |
| GAATCGGGACACGTTGATGG+CGG | 0.662257 | 7.2:-79559561 | None:intergenic |
| CGTTGCCGCAGACCTTATGG+TGG | 0.670034 | 7.2:-79559290 | None:intergenic |
| TTGTGATGCACGCATCCACG+CGG | 0.677080 | 7.2:+79559393 | MS.gene62915:CDS |
| CGGCAAACCGTGTAGCCTCG+AGG | 0.686538 | 7.2:+79559413 | MS.gene62915:CDS |
| TTTACAAAGAAAAGCCGCCG+GGG | 0.712447 | 7.2:-79559473 | None:intergenic |
| CCAGACGCGTTCGTGCCTCG+AGG | 0.721870 | 7.2:-79559428 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTGAAATATTTATCTTTAA+GGG | + | chr7.2:79561666-79561685 | MS.gene62915:intron | 10.0% |
| !! | TATTGAAATATTTATCTTTA+AGG | + | chr7.2:79561665-79561684 | MS.gene62915:intron | 10.0% |
| !!! | TGATTTTTTCAAATTATTAA+CGG | + | chr7.2:79561334-79561353 | MS.gene62915:intron | 10.0% |
| !! | AGAGTTTGATATTATAAATT+AGG | - | chr7.2:79560710-79560729 | None:intergenic | 15.0% |
| !! | ATATTAGTGATAAAAAAAGT+AGG | - | chr7.2:79562087-79562106 | None:intergenic | 15.0% |
| !! | CCTATAAATTATAATCTAAA+AGG | - | chr7.2:79560383-79560402 | None:intergenic | 15.0% |
| !!! | CCTTTTAGATTATAATTTAT+AGG | + | chr7.2:79560380-79560399 | MS.gene62915:intron | 15.0% |
| !!! | TTGTAGTTTTTTTTTCTTAA+GGG | - | chr7.2:79560455-79560474 | None:intergenic | 15.0% |
| !!! | TTTATTTTATTTTTTGCCTT+GGG | - | chr7.2:79560516-79560535 | None:intergenic | 15.0% |
| !!! | TTTGTAGTTTTTTTTTCTTA+AGG | - | chr7.2:79560456-79560475 | None:intergenic | 15.0% |
| !!! | TTTTATGAAATTGTTGAAAA+TGG | - | chr7.2:79561173-79561192 | None:intergenic | 15.0% |
| !!! | TTTTATTTTATTTTTTGCCT+TGG | - | chr7.2:79560517-79560536 | None:intergenic | 15.0% |
| !!! | TTTTTTTGAAGAAATCAAAA+TGG | - | chr7.2:79561114-79561133 | None:intergenic | 15.0% |
| !! | AAAATAAAAAAAAAGACACG+TGG | + | chr7.2:79560528-79560547 | MS.gene62915:intron | 20.0% |
| !! | AAAATGGAATATATTAACAG+CGG | - | chr7.2:79561098-79561117 | None:intergenic | 20.0% |
| !! | GAAAATTTGAGAAAACAATT+AGG | + | chr7.2:79562307-79562326 | MS.gene62915:CDS | 20.0% |
| !! | TATCAGCATTAAAATTCATA+AGG | - | chr7.2:79560795-79560814 | None:intergenic | 20.0% |
| !! | TCAACAATTTCATAAAAACA+TGG | + | chr7.2:79561176-79561195 | MS.gene62915:intron | 20.0% |
| !! | TTCAGTGTAATTATATGAAT+CGG | - | chr7.2:79561309-79561328 | None:intergenic | 20.0% |
| !!! | AAAAGTTGTTAATTTGCATT+TGG | + | chr7.2:79560985-79561004 | MS.gene62915:intron | 20.0% |
| !!! | AATAATGGATTTTTGTTTAG+TGG | + | chr7.2:79559829-79559848 | MS.gene62915:CDS | 20.0% |
| !!! | TATTCTAGAAAATTGATACT+TGG | - | chr7.2:79561543-79561562 | None:intergenic | 20.0% |
| !!! | TGTAGTTTTTTTTTCTTAAG+GGG | - | chr7.2:79560454-79560473 | None:intergenic | 20.0% |
| !!! | TTATTTTATTTTTTGCCTTG+GGG | - | chr7.2:79560515-79560534 | None:intergenic | 20.0% |
| !!! | TTTCATTTTCTTTTCTTATC+AGG | + | chr7.2:79562110-79562129 | MS.gene62915:intron | 20.0% |
| ! | AAAAAAGTAGGAGATATCAA+AGG | - | chr7.2:79562075-79562094 | None:intergenic | 25.0% |
| ! | AAAAAGGGTAAAGAGTTATA+CGG | - | chr7.2:79561401-79561420 | None:intergenic | 25.0% |
| ! | AATAACAACAACATTAGCAA+TGG | + | chr7.2:79559790-79559809 | MS.gene62915:CDS | 25.0% |
| ! | CCAATAATTGTCATTCTTAT+CGG | - | chr7.2:79561993-79562012 | None:intergenic | 25.0% |
| ! | CCACTAAAGAAAAGAAAAAA+GGG | - | chr7.2:79561416-79561435 | None:intergenic | 25.0% |
| ! | TCAGGTCTAATATTGTAAAT+TGG | + | chr7.2:79561813-79561832 | MS.gene62915:intron | 25.0% |
| ! | TCCACTAAAGAAAAGAAAAA+AGG | - | chr7.2:79561417-79561436 | None:intergenic | 25.0% |
| ! | TTAAAATTCATAAGGTTCGA+TGG | - | chr7.2:79560787-79560806 | None:intergenic | 25.0% |
| ! | TTTCAAATTATTAACGGTGT+CGG | + | chr7.2:79561340-79561359 | MS.gene62915:intron | 25.0% |
| ! | TTTGAATTTGATATGCTTTG+TGG | + | chr7.2:79560887-79560906 | MS.gene62915:intron | 25.0% |
| !! | AATCTACAGAAGTCAATTTT+GGG | - | chr7.2:79561730-79561749 | None:intergenic | 25.0% |
| !! | TTGTTATTGATGTTCTTTAG+AGG | - | chr7.2:79559760-79559779 | None:intergenic | 25.0% |
| !! | TTTTTCTTTTCTTTAGTGGA+AGG | + | chr7.2:79561417-79561436 | MS.gene62915:intron | 25.0% |
| !!! | TATTTTATTTTTTGCCTTGG+GGG | - | chr7.2:79560514-79560533 | None:intergenic | 25.0% |
| !!! | TTGTTTTGTTTGCAATTGTT+TGG | + | chr7.2:79560177-79560196 | MS.gene62915:intron | 25.0% |
| AAACAATTAGGTATGCTTCA+AGG | + | chr7.2:79562319-79562338 | MS.gene62915:CDS | 30.0% | |
| AACTTCTGTAATTAGTGATG+TGG | - | chr7.2:79562430-79562449 | None:intergenic | 30.0% | |
| ACATCACTAATTACAGAAGT+TGG | + | chr7.2:79562429-79562448 | MS.gene62915:CDS | 30.0% | |
| ATCGGTAAGAACATAAATCT+TGG | - | chr7.2:79561975-79561994 | None:intergenic | 30.0% | |
| CAACAACAACAAGATCATTA+TGG | + | chr7.2:79559952-79559971 | MS.gene62915:CDS | 30.0% | |
| CATAATCAAGAGGGTAATAA+TGG | + | chr7.2:79559814-79559833 | MS.gene62915:CDS | 30.0% | |
| CCGATAAGAATGACAATTAT+TGG | + | chr7.2:79561990-79562009 | MS.gene62915:intron | 30.0% | |
| CTAATTACAGAAGTTGGATA+TGG | + | chr7.2:79562435-79562454 | MS.gene62915:CDS | 30.0% | |
| CTCATCATGATGAGTATTAT+TGG | - | chr7.2:79559923-79559942 | None:intergenic | 30.0% | |
| GGACAAATTTCAAATCATGT+CGG | - | chr7.2:79560362-79560381 | None:intergenic | 30.0% | |
| GGATCGCAATATTTAAACAA+AGG | + | chr7.2:79561834-79561853 | MS.gene62915:intron | 30.0% | |
| TACTACTAAAGTGGACAAAT+CGG | + | chr7.2:79560730-79560749 | MS.gene62915:intron | 30.0% | |
| TCAAACTCTTACTACTAAAG+TGG | + | chr7.2:79560721-79560740 | MS.gene62915:intron | 30.0% | |
| TGATTTATCTCTGCTTAATC+TGG | + | chr7.2:79561010-79561029 | MS.gene62915:intron | 30.0% | |
| TGTTTGCAATTGTTTGGAAA+GGG | + | chr7.2:79560183-79560202 | MS.gene62915:intron | 30.0% | |
| TTGTTTGCAATTGTTTGGAA+AGG | + | chr7.2:79560182-79560201 | MS.gene62915:intron | 30.0% | |
| ! | AATAGGTCAATTGTTCCTTT+TGG | - | chr7.2:79562198-79562217 | None:intergenic | 30.0% |
| ! | AGGTACAGAATTTTCAACTT+GGG | + | chr7.2:79560028-79560047 | MS.gene62915:CDS | 30.0% |
| ! | ATCTACAGAAGTCAATTTTG+GGG | - | chr7.2:79561729-79561748 | None:intergenic | 30.0% |
| ! | CAGAATCTTGGTTTGAAAAT+CGG | + | chr7.2:79560839-79560858 | MS.gene62915:intron | 30.0% |
| ! | CTTTTCCAAATTTGCGATTT+TGG | - | chr7.2:79560663-79560682 | None:intergenic | 30.0% |
| ! | GAATCTACAGAAGTCAATTT+TGG | - | chr7.2:79561731-79561750 | None:intergenic | 30.0% |
| ! | GATTTTCAAACCAAGATTCT+GGG | - | chr7.2:79560840-79560859 | None:intergenic | 30.0% |
| !! | TGGATTGTATGTTTGCTTTT+CGG | + | chr7.2:79561030-79561049 | MS.gene62915:intron | 30.0% |
| !!! | CCCTTTTTTCTTTTCTTTAG+TGG | + | chr7.2:79561413-79561432 | MS.gene62915:intron | 30.0% |
| AAAGCTGGATTCAGTTACAA+TGG | + | chr7.2:79560069-79560088 | MS.gene62915:CDS | 35.0% | |
| AAGTATCATGCTTTCTTGCT+AGG | + | chr7.2:79561452-79561471 | MS.gene62915:intron | 35.0% | |
| ACTCAGAGTTTACTGATAAG+TGG | + | chr7.2:79561777-79561796 | MS.gene62915:intron | 35.0% | |
| AGCAATGGTCATAATCAAGA+GGG | + | chr7.2:79559805-79559824 | MS.gene62915:CDS | 35.0% | |
| ATGAAAATGAAGCTGCTTCA+TGG | + | chr7.2:79559722-79559741 | MS.gene62915:CDS | 35.0% | |
| ATGAAACACGAAACACTCTT+CGG | + | chr7.2:79561242-79561261 | MS.gene62915:intron | 35.0% | |
| ATGGAATATATTAACAGCGG+CGG | - | chr7.2:79561095-79561114 | None:intergenic | 35.0% | |
| ATTGTAACTGAATCCAGCTT+TGG | - | chr7.2:79560070-79560089 | None:intergenic | 35.0% | |
| CACAAGAATTGCAATCAACA+AGG | - | chr7.2:79559876-79559895 | None:intergenic | 35.0% | |
| CAGTTTCAATTAGTGCTACA+TGG | + | chr7.2:79562019-79562038 | MS.gene62915:intron | 35.0% | |
| CTTGAAGCCATTTACTAGTA+CGG | + | chr7.2:79561565-79561584 | MS.gene62915:intron | 35.0% | |
| GAATAGAAGGACCTGAAAAT+AGG | - | chr7.2:79562215-79562234 | None:intergenic | 35.0% | |
| GCTACAGTTGCAAAACTTAT+GGG | - | chr7.2:79560483-79560502 | None:intergenic | 35.0% | |
| GTTCCTCAAAAAAGCTATGT+GGG | + | chr7.2:79559976-79559995 | MS.gene62915:CDS | 35.0% | |
| TAACCGGAAATTGGAAGAAT+CGG | - | chr7.2:79559580-79559599 | None:intergenic | 35.0% | |
| TAGCAATGGTCATAATCAAG+AGG | + | chr7.2:79559804-79559823 | MS.gene62915:CDS | 35.0% | |
| TCAGGTTTCAGTTTCATCAA+TGG | + | chr7.2:79562128-79562147 | MS.gene62915:intron | 35.0% | |
| TCAGTTTCATCAATGGATGT+TGG | + | chr7.2:79562135-79562154 | MS.gene62915:intron | 35.0% | |
| TCTATCCATTGGAGAGAAAT+GGG | - | chr7.2:79562247-79562266 | None:intergenic | 35.0% | |
| TCTTTAGTGGAAGGAATCTA+AGG | + | chr7.2:79561426-79561445 | MS.gene62915:intron | 35.0% | |
| TGCTACAGTTGCAAAACTTA+TGG | - | chr7.2:79560484-79560503 | None:intergenic | 35.0% | |
| TGGGAAGACATTTGAATAGA+AGG | - | chr7.2:79562228-79562247 | None:intergenic | 35.0% | |
| TGTTCCTCAAAAAAGCTATG+TGG | + | chr7.2:79559975-79559994 | MS.gene62915:CDS | 35.0% | |
| TGTTGTTCCGTACTAGTAAA+TGG | - | chr7.2:79561575-79561594 | None:intergenic | 35.0% | |
| TGTTTGGAAAGGGTTGAAAT+TGG | + | chr7.2:79560193-79560212 | MS.gene62915:intron | 35.0% | |
| TTCCTCAATACCAATTCAAG+AGG | - | chr7.2:79560285-79560304 | None:intergenic | 35.0% | |
| ! | ACAAGTACAAGTAGTGTTGA+AGG | + | chr7.2:79561592-79561611 | MS.gene62915:intron | 35.0% |
| ! | ACAGAATTTTCAACTTGGGT+TGG | + | chr7.2:79560032-79560051 | MS.gene62915:CDS | 35.0% |
| ! | AGTGGACAAATCGGTATTTT+TGG | + | chr7.2:79560739-79560758 | MS.gene62915:intron | 35.0% |
| ! | CAGGTACAGAATTTTCAACT+TGG | + | chr7.2:79560027-79560046 | MS.gene62915:CDS | 35.0% |
| ! | CGATTTTCAAACCAAGATTC+TGG | - | chr7.2:79560841-79560860 | None:intergenic | 35.0% |
| ! | CTTGAATTGGTATTGAGGAA+GGG | + | chr7.2:79560285-79560304 | MS.gene62915:intron | 35.0% |
| ! | CTTGTTGATTGCAATTCTTG+TGG | + | chr7.2:79559874-79559893 | MS.gene62915:CDS | 35.0% |
| ! | GGAACAATTGACCTATTTTC+AGG | + | chr7.2:79562201-79562220 | MS.gene62915:CDS | 35.0% |
| ! | TACTACAGTCACTTTGCAAT+AGG | + | chr7.2:79561872-79561891 | MS.gene62915:intron | 35.0% |
| ! | TAGCAAGAAAGCATGATACT+TGG | - | chr7.2:79561453-79561472 | None:intergenic | 35.0% |
| ! | TCTACAGAAGTCAATTTTGG+GGG | - | chr7.2:79561728-79561747 | None:intergenic | 35.0% |
| ! | TCTTGAATTGGTATTGAGGA+AGG | + | chr7.2:79560284-79560303 | MS.gene62915:intron | 35.0% |
| ! | TCTTTTTCTCTCTGTACCTT+AGG | - | chr7.2:79562281-79562300 | None:intergenic | 35.0% |
| ! | TTTTGCAACTGTAGCAGTTT+TGG | + | chr7.2:79560488-79560507 | MS.gene62915:intron | 35.0% |
| !! | ACAACTTTTGAGTCCAACTA+TGG | - | chr7.2:79560974-79560993 | None:intergenic | 35.0% |
| !! | ATTTTGGGGGAATTAGATTC+TGG | - | chr7.2:79561715-79561734 | None:intergenic | 35.0% |
| !! | GATTGTATGTTTGCTTTTCG+GGG | + | chr7.2:79561032-79561051 | MS.gene62915:intron | 35.0% |
| !! | GGATTGTATGTTTGCTTTTC+GGG | + | chr7.2:79561031-79561050 | MS.gene62915:intron | 35.0% |
| !! | GGCGGTTTTGTAGTTTTTTT+GGG | + | chr7.2:79560635-79560654 | MS.gene62915:intron | 35.0% |
| !! | TGAAGGTGTTGATCATGATA+TGG | + | chr7.2:79559696-79559715 | MS.gene62915:CDS | 35.0% |
| !!! | CGGTTTTGTAGTTTTTTTGG+GGG | + | chr7.2:79560637-79560656 | MS.gene62915:intron | 35.0% |
| !!! | GCGGTTTTGTAGTTTTTTTG+GGG | + | chr7.2:79560636-79560655 | MS.gene62915:intron | 35.0% |
| !!! | TCGGTATTTTTGGTGTAAAC+CGG | + | chr7.2:79560749-79560768 | MS.gene62915:intron | 35.0% |
| AAAACAGCATGTCAGTCATG+TGG | - | chr7.2:79560949-79560968 | None:intergenic | 40.0% | |
| AACCGGAAATTGGAAGAATC+GGG | - | chr7.2:79559579-79559598 | None:intergenic | 40.0% | |
| ACAGTTGCAAAACTTATGGG+AGG | - | chr7.2:79560480-79560499 | None:intergenic | 40.0% | |
| ACCTATTCAAGACCTCCAAA+AGG | + | chr7.2:79562180-79562199 | MS.gene62915:CDS | 40.0% | |
| ACTCTTGCTTCTCTATCCAT+TGG | - | chr7.2:79562258-79562277 | None:intergenic | 40.0% | |
| AGAGGCTCAAGATCTTGAAT+TGG | - | chr7.2:79560267-79560286 | None:intergenic | 40.0% | |
| AGATCTTGAGCCTCTTGAAT+TGG | + | chr7.2:79560272-79560291 | MS.gene62915:intron | 40.0% | |
| AGCCTCTTGAATTGGTATTG+AGG | + | chr7.2:79560280-79560299 | MS.gene62915:intron | 40.0% | |
| ATAGAGAAGCAAGAGTCCTA+AGG | + | chr7.2:79562262-79562281 | MS.gene62915:CDS | 40.0% | |
| CATGCTTTCTTGCTAGGAAA+CGG | + | chr7.2:79561458-79561477 | MS.gene62915:intron | 40.0% | |
| CCAATTTCCGGTTACCTTTA+CGG | + | chr7.2:79559586-79559605 | MS.gene62915:CDS | 40.0% | |
| CTCTATCCATTGGAGAGAAA+TGG | - | chr7.2:79562248-79562267 | None:intergenic | 40.0% | |
| GGTAAAGAGTTATACGGACA+TGG | - | chr7.2:79561395-79561414 | None:intergenic | 40.0% | |
| GTTGATTGCAATTCTTGTGG+TGG | + | chr7.2:79559877-79559896 | MS.gene62915:CDS | 40.0% | |
| TAGATTCGAACCCAGAATCT+TGG | + | chr7.2:79560827-79560846 | MS.gene62915:intron | 40.0% | |
| TCTGGGTTCGAATCTAACTT+TGG | - | chr7.2:79560823-79560842 | None:intergenic | 40.0% | |
| TGCCACAGTTGCAAAACTTA+GGG | + | chr7.2:79560612-79560631 | MS.gene62915:intron | 40.0% | |
| TTCATCTTCGGCACCTAAAA+GGG | - | chr7.2:79559623-79559642 | None:intergenic | 40.0% | |
| TTGGAAAGGGTTGAAATTGG+TGG | + | chr7.2:79560196-79560215 | MS.gene62915:intron | 40.0% | |
| ! | AGGTCAATTGTTCCTTTTGG+AGG | - | chr7.2:79562195-79562214 | None:intergenic | 40.0% |
| ! | ATCGCAACTTTGGGAAAGTT+AGG | - | chr7.2:79560426-79560445 | None:intergenic | 40.0% |
| ! | CTTTCCCAAAGTTGCGATTT+TGG | + | chr7.2:79560428-79560447 | MS.gene62915:intron | 40.0% |
| ! | GAATAGGTCATGGTTGATTC+TGG | - | chr7.2:79562168-79562187 | None:intergenic | 40.0% |
| ! | GTCAGTGTTTGAGTTCTATC+TGG | + | chr7.2:79561366-79561385 | MS.gene62915:intron | 40.0% |
| ! | TCGCAACTTTGGGAAAGTTA+GGG | - | chr7.2:79560425-79560444 | None:intergenic | 40.0% |
| ! | TTTTGCAACTGTGGCAGTTT+TGG | - | chr7.2:79560608-79560627 | None:intergenic | 40.0% |
| !! | GGGCGGTTTTGTAGTTTTTT+TGG | + | chr7.2:79560634-79560653 | MS.gene62915:intron | 40.0% |
| !! | TCCTTTTGGAGGTCTTGAAT+AGG | - | chr7.2:79562184-79562203 | None:intergenic | 40.0% |
| !! | TGGAGAAGTTGATGAGTACT+TGG | + | chr7.2:79559849-79559868 | MS.gene62915:CDS | 40.0% |
| !!! | CATGCTGTTTTTGCCATAGT+TGG | + | chr7.2:79560958-79560977 | MS.gene62915:intron | 40.0% |
| !!! | CGGTATTTTTGGTGTAAACC+GGG | + | chr7.2:79560750-79560769 | MS.gene62915:intron | 40.0% |
| !!! | TATTTTTGGTGTAAACCGGG+TGG | + | chr7.2:79560753-79560772 | MS.gene62915:intron | 40.0% |
| !!! | TCACCCACATAGCTTTTTTG+AGG | - | chr7.2:79559982-79560001 | None:intergenic | 40.0% |
| AGCATGTCAGTCATGTGGAA+AGG | - | chr7.2:79560944-79560963 | None:intergenic | 45.0% | |
| AGCGTAGACCGAGTCAAAAT+TGG | + | chr7.2:79560574-79560593 | MS.gene62915:intron | 45.0% | |
| AGTGGACAAGTCACTTGTTC+AGG | + | chr7.2:79561795-79561814 | MS.gene62915:CDS | 45.0% | |
| ATAAATATGCCGAGTCTGCG+CGG | - | chr7.2:79559366-79559385 | None:intergenic | 45.0% | |
| CACGAAACACTCTTCGGATT+AGG | + | chr7.2:79561248-79561267 | MS.gene62915:intron | 45.0% | |
| CCACAGTTGCAAAACTTAGG+GGG | + | chr7.2:79560614-79560633 | MS.gene62915:intron | 45.0% | |
| CCGTAAAGGTAACCGGAAAT+TGG | - | chr7.2:79559589-79559608 | None:intergenic | 45.0% | |
| CTCTGGTACACCTTGTACTT+TGG | + | chr7.2:79561061-79561080 | MS.gene62915:intron | 45.0% | |
| CTGCCACAGTTGCAAAACTT+AGG | + | chr7.2:79560611-79560630 | MS.gene62915:intron | 45.0% | |
| CTTCATCTTCGGCACCTAAA+AGG | - | chr7.2:79559624-79559643 | None:intergenic | 45.0% | |
| CTTTACAAAGAAAAGCCGCC+GGG | - | chr7.2:79559477-79559496 | None:intergenic | 45.0% | |
| GAGTTTGAGTCTTCCAAAGC+TGG | + | chr7.2:79560054-79560073 | MS.gene62915:CDS | 45.0% | |
| GCCACAGTTGCAAAACTTAG+GGG | + | chr7.2:79560613-79560632 | MS.gene62915:intron | 45.0% | |
| GCTGGATTCAGTTACAATGG+TGG | + | chr7.2:79560072-79560091 | MS.gene62915:CDS | 45.0% | |
| GCTTTACAAAGAAAAGCCGC+CGG | - | chr7.2:79559478-79559497 | None:intergenic | 45.0% | |
| GGAAAGCCTATGCTGAAACT+CGG | + | chr7.2:79562340-79562359 | MS.gene62915:CDS | 45.0% | |
| GGTGTAAGCTCCAAAGTACA+AGG | - | chr7.2:79561074-79561093 | None:intergenic | 45.0% | |
| GTCCCGATTCTTCCAATTTC+CGG | + | chr7.2:79559574-79559593 | MS.gene62915:CDS | 45.0% | |
| GTCTTCCCATTTCTCTCCAA+TGG | + | chr7.2:79562239-79562258 | MS.gene62915:CDS | 45.0% | |
| GTGGATATCAGCATCACAAG+TGG | - | chr7.2:79559521-79559540 | None:intergenic | 45.0% | |
| TGGAGGTCTTGAATAGGTCA+TGG | - | chr7.2:79562178-79562197 | None:intergenic | 45.0% | |
| TGTACCTGCTGTTGTTGAAC+AGG | - | chr7.2:79560015-79560034 | None:intergenic | 45.0% | |
| TGTTCCTGTTCAACAACAGC+AGG | + | chr7.2:79560008-79560027 | MS.gene62915:CDS | 45.0% | |
| TTGGGGGAATTAGATTCTGG+AGG | - | chr7.2:79561712-79561731 | None:intergenic | 45.0% | |
| TTTACAAAGAAAAGCCGCCG+GGG | - | chr7.2:79559476-79559495 | None:intergenic | 45.0% | |
| ! | CGCAACTTTGGGAAAGTTAG+GGG | - | chr7.2:79560424-79560443 | None:intergenic | 45.0% |
| ! | GCAACTTTGGGAAAGTTAGG+GGG | - | chr7.2:79560423-79560442 | None:intergenic | 45.0% |
| ! | GCGAATCGACCTTTTATACG+CGG | - | chr7.2:79562366-79562385 | None:intergenic | 45.0% |
| !! | ACCGAGTCAAAATTGGCCTT+GGG | + | chr7.2:79560581-79560600 | MS.gene62915:intron | 45.0% |
| !! | GCTTTTCGGGGTATTTTCTC+TGG | + | chr7.2:79561044-79561063 | MS.gene62915:intron | 45.0% |
| !!! | CTTTTAGGTGCCGAAGATGA+AGG | + | chr7.2:79559622-79559641 | MS.gene62915:CDS | 45.0% |
| !! | AAAAAATTTATTATGTATAT+TGG | - | chr7.2:79561502-79561521 | None:intergenic | 5.0% |
| AGGGGCCAAAATCGCAACTT+TGG | - | chr7.2:79560436-79560455 | None:intergenic | 50.0% | |
| ATCTTCGGCACCTAAAAGGG+TGG | - | chr7.2:79559620-79559639 | None:intergenic | 50.0% | |
| CAGTTGCAAAACTTAGGGGG+CGG | + | chr7.2:79560617-79560636 | MS.gene62915:intron | 50.0% | |
| GAAACTCGGCCGCGTATAAA+AGG | + | chr7.2:79562354-79562373 | MS.gene62915:CDS | 50.0% | |
| GAAGAATCGGGACACGTTGA+TGG | - | chr7.2:79559567-79559586 | None:intergenic | 50.0% | |
| GCCGACAAAGCCTTCATCTT+CGG | - | chr7.2:79559635-79559654 | None:intergenic | 50.0% | |
| GGGGCCAAAATCGCAACTTT+GGG | - | chr7.2:79560435-79560454 | None:intergenic | 50.0% | |
| GGGGGCCAAAATCGCAAATT+TGG | + | chr7.2:79560655-79560674 | MS.gene62915:intron | 50.0% | |
| GTGGAAGAAGAGGAGGATGA+AGG | + | chr7.2:79559679-79559698 | MS.gene62915:CDS | 50.0% | |
| GTGTCAGACACGAGATCTGT+CGG | - | chr7.2:79561287-79561306 | None:intergenic | 50.0% | |
| ! | CCCCCTAAGTTTTGCAACTG+TGG | - | chr7.2:79560617-79560636 | None:intergenic | 50.0% |
| ! | GAAGATGAAGGCTTTGTCGG+CGG | + | chr7.2:79559634-79559653 | MS.gene62915:CDS | 50.0% |
| ! | GACCGAGTCAAAATTGGCCT+TGG | + | chr7.2:79560580-79560599 | MS.gene62915:intron | 50.0% |
| ! | GCCGAAGATGAAGGCTTTGT+CGG | + | chr7.2:79559631-79559650 | MS.gene62915:CDS | 50.0% |
| ! | GGGGAATTAGATTCTGGAGG+TGG | - | chr7.2:79561709-79561728 | None:intergenic | 50.0% |
| ! | TCTTCGGATTAGGCGTGTCT+TGG | + | chr7.2:79561258-79561277 | MS.gene62915:intron | 50.0% |
| ! | TTGCAAGAGGGTTAGCAGAG+TGG | - | chr7.2:79559540-79559559 | None:intergenic | 50.0% |
| !! | CCGAGTCAAAATTGGCCTTG+GGG | + | chr7.2:79560582-79560601 | MS.gene62915:intron | 50.0% |
| !! | TCGATGGATTAGTCTCCACC+CGG | - | chr7.2:79560771-79560790 | None:intergenic | 50.0% |
| !!! | CCCCAAGGCCAATTTTGACT+CGG | - | chr7.2:79560585-79560604 | None:intergenic | 50.0% |
| AGACACGTGGCACCTCACTT+AGG | + | chr7.2:79560541-79560560 | MS.gene62915:intron | 55.0% | |
| CACAGCCACCATAAGGTCTG+CGG | + | chr7.2:79559285-79559304 | MS.gene62915:CDS | 55.0% | |
| CATAAGGTCTGCGGCAACGT+GGG | + | chr7.2:79559294-79559313 | MS.gene62915:CDS | 55.0% | |
| CTGTGAGGTGGAAGAAGAGG+AGG | + | chr7.2:79559672-79559691 | MS.gene62915:CDS | 55.0% | |
| GACACGTGGCACCTCACTTA+GGG | + | chr7.2:79560542-79560561 | MS.gene62915:intron | 55.0% | |
| GTGGATGCGTGCATCACAAG+CGG | - | chr7.2:79559392-79559411 | None:intergenic | 55.0% | |
| TTGTGATGCACGCATCCACG+CGG | + | chr7.2:79559393-79559412 | MS.gene62915:CDS | 55.0% | |
| ! | GAATCGGGACACGTTGATGG+CGG | - | chr7.2:79559564-79559583 | None:intergenic | 55.0% |
| !! | GTTGATGGCGGCTTGCAAGA+GGG | - | chr7.2:79559552-79559571 | None:intergenic | 55.0% |
| !! | TGTAGCAGTTTTGGCCCCCA+AGG | + | chr7.2:79560497-79560516 | MS.gene62915:intron | 55.0% |
| ACGCGGCCGAGTTTCAGCAT+AGG | - | chr7.2:79562349-79562368 | None:intergenic | 60.0% | |
| CCACGTTGCCGCAGACCTTA+TGG | - | chr7.2:79559296-79559315 | None:intergenic | 60.0% | |
| CCATAAGGTCTGCGGCAACG+TGG | + | chr7.2:79559293-79559312 | MS.gene62915:CDS | 60.0% | |
| CCTCAGCCACAGCCACCATA+AGG | + | chr7.2:79559278-79559297 | MS.gene62915:CDS | 60.0% | |
| CCTTATGGTGGCTGTGGCTG+AGG | - | chr7.2:79559281-79559300 | None:intergenic | 60.0% | |
| CGCAGACCTTATGGTGGCTG+TGG | - | chr7.2:79559287-79559306 | None:intergenic | 60.0% | |
| CGGCTGTGAGGTGGAAGAAG+AGG | + | chr7.2:79559669-79559688 | MS.gene62915:CDS | 60.0% | |
| CGGGGGACCGTAAAGGTAAC+CGG | - | chr7.2:79559596-79559615 | None:intergenic | 60.0% | |
| CGGTTACCTTTACGGTCCCC+CGG | + | chr7.2:79559594-79559613 | MS.gene62915:CDS | 60.0% | |
| CGTTGCCGCAGACCTTATGG+TGG | - | chr7.2:79559293-79559312 | None:intergenic | 60.0% | |
| CTGACGTGGCACCCTAAGTG+AGG | - | chr7.2:79560556-79560575 | None:intergenic | 60.0% | |
| GTTCGTGCCTCGAGGCTACA+CGG | - | chr7.2:79559423-79559442 | None:intergenic | 60.0% | |
| TATGGTGGCTGTGGCTGAGG+TGG | - | chr7.2:79559278-79559297 | None:intergenic | 60.0% | |
| TCGGCACCTAAAAGGGTGGC+CGG | - | chr7.2:79559616-79559635 | None:intergenic | 60.0% | |
| ! | AGCATGTGACACGTGCCGCT+CGG | + | chr7.2:79559321-79559340 | MS.gene62915:CDS | 60.0% |
| ! | GATGAAGGCTTTGTCGGCGG+TGG | + | chr7.2:79559637-79559656 | MS.gene62915:CDS | 60.0% |
| ! | GGTTTTCTGCCGCGCAGACT+CGG | + | chr7.2:79559354-79559373 | MS.gene62915:CDS | 60.0% |
| !! | CGTTGATGGCGGCTTGCAAG+AGG | - | chr7.2:79559553-79559572 | None:intergenic | 60.0% |
| !! | CTGTGGCAGTTTTGGCCCCA+AGG | - | chr7.2:79560600-79560619 | None:intergenic | 60.0% |
| !! | TGACTCGGTCTACGCTGACG+TGG | - | chr7.2:79560570-79560589 | None:intergenic | 60.0% |
| AGGCTACACGGTTTGCCGCG+TGG | - | chr7.2:79559411-79559430 | None:intergenic | 65.0% | |
| CGAACGCGTCTGGGTCTGTG+AGG | + | chr7.2:79559438-79559457 | MS.gene62915:CDS | 65.0% | |
| CGCGGCAGAAAACCGCGCAT+GGG | - | chr7.2:79559348-79559367 | None:intergenic | 65.0% | |
| CGGCAAACCGTGTAGCCTCG+AGG | + | chr7.2:79559413-79559432 | MS.gene62915:CDS | 65.0% | |
| CGGCACCTAAAAGGGTGGCC+GGG | - | chr7.2:79559615-79559634 | None:intergenic | 65.0% | |
| CTCGAGGCACGAACGCGTCT+GGG | + | chr7.2:79559429-79559448 | MS.gene62915:CDS | 65.0% | |
| GCACCTAAAAGGGTGGCCGG+GGG | - | chr7.2:79559613-79559632 | None:intergenic | 65.0% | |
| GCGGCAGAAAACCGCGCATG+GGG | - | chr7.2:79559347-79559366 | None:intergenic | 65.0% | |
| GGCACCTAAAAGGGTGGCCG+GGG | - | chr7.2:79559614-79559633 | None:intergenic | 65.0% | |
| TTTGTCGGCGGTGGTTGCGG+TGG | + | chr7.2:79559646-79559665 | MS.gene62915:CDS | 65.0% | |
| ! | CTGTGGCTGAGGTGGTGGTG+AGG | - | chr7.2:79559270-79559289 | None:intergenic | 65.0% |
| ! | GGCTTTGTCGGCGGTGGTTG+CGG | + | chr7.2:79559643-79559662 | MS.gene62915:CDS | 65.0% |
| AAACCGCGCATGGGGCCGAG+CGG | - | chr7.2:79559339-79559358 | None:intergenic | 70.0% | |
| CCAGACGCGTTCGTGCCTCG+AGG | - | chr7.2:79559431-79559450 | None:intergenic | 70.0% | |
| CCTCGAGGCACGAACGCGTC+TGG | + | chr7.2:79559428-79559447 | MS.gene62915:CDS | 70.0% | |
| GCGCGGCAGAAAACCGCGCA+TGG | - | chr7.2:79559349-79559368 | None:intergenic | 70.0% | |
| GGTGGCTGTGGCTGAGGTGG+TGG | - | chr7.2:79559275-79559294 | None:intergenic | 70.0% | |
| ! | GGTCCCCCGGCCACCCTTTT+AGG | + | chr7.2:79559607-79559626 | MS.gene62915:CDS | 70.0% |
| ! | TGGTTGCGGTGGCGGCTGTG+AGG | + | chr7.2:79559657-79559676 | MS.gene62915:CDS | 70.0% |
| ! | TTGCGGTGGCGGCTGTGAGG+TGG | + | chr7.2:79559660-79559679 | MS.gene62915:CDS | 70.0% |
| GGGTGGCCGGGGGACCGTAA+AGG | - | chr7.2:79559603-79559622 | None:intergenic | 75.0% | |
| GTCGGCGGTGGTTGCGGTGG+CGG | + | chr7.2:79559649-79559668 | MS.gene62915:CDS | 75.0% | |
| TGAGGCCTGCGAGCGTGCCC+CGG | + | chr7.2:79559456-79559475 | MS.gene62915:CDS | 75.0% | |
| !! | GTGCCGCTCGGCCCCATGCG+CGG | + | chr7.2:79559333-79559352 | MS.gene62915:CDS | 80.0% |
| ! | AGCCGCCGGGGCACGCTCGC+AGG | - | chr7.2:79559464-79559483 | None:intergenic | 85.0% |
| ! | GGCCTGCGAGCGTGCCCCGG+CGG | + | chr7.2:79559459-79559478 | MS.gene62915:CDS | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.2 | gene | 79559250 | 79562476 | 79559250 | ID=MS.gene62915 |
| chr7.2 | mRNA | 79559250 | 79562476 | 79559250 | ID=MS.gene62915.t1;Parent=MS.gene62915 |
| chr7.2 | exon | 79559250 | 79560110 | 79559250 | ID=MS.gene62915.t1.exon1;Parent=MS.gene62915.t1 |
| chr7.2 | CDS | 79559250 | 79560110 | 79559250 | ID=cds.MS.gene62915.t1;Parent=MS.gene62915.t1 |
| chr7.2 | exon | 79561783 | 79561816 | 79561783 | ID=MS.gene62915.t1.exon2;Parent=MS.gene62915.t1 |
| chr7.2 | CDS | 79561783 | 79561816 | 79561783 | ID=cds.MS.gene62915.t1;Parent=MS.gene62915.t1 |
| chr7.2 | exon | 79562169 | 79562476 | 79562169 | ID=MS.gene62915.t1.exon3;Parent=MS.gene62915.t1 |
| chr7.2 | CDS | 79562169 | 79562476 | 79562169 | ID=cds.MS.gene62915.t1;Parent=MS.gene62915.t1 |
| Gene Sequence |
| Protein sequence |
