Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44781.t1 | XP_013447714.1 | 82.9 | 403 | 57 | 4 | 1 | 398 | 1 | 396 | 5.70E-120 | 441 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44781.t1 | Q96502 | 50.9 | 397 | 120 | 10 | 19 | 398 | 9 | 347 | 7.9e-54 | 212.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44781.t1 | A0A072TWC7 | 82.9 | 403 | 57 | 4 | 1 | 398 | 1 | 396 | 4.1e-120 | 441.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene44781.t1 | TF | C2C2-CO-like |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049222 | MS.gene44781 | 0.805986 | 1.02E-49 | -1.69E-46 |
| MS.gene049232 | MS.gene44781 | 0.875014 | 4.30E-68 | -1.69E-46 |
| MS.gene049285 | MS.gene44781 | 0.808872 | 2.50E-50 | -1.69E-46 |
| MS.gene049320 | MS.gene44781 | 0.855666 | 5.41E-62 | -1.69E-46 |
| MS.gene049600 | MS.gene44781 | 0.834967 | 2.21E-56 | -1.69E-46 |
| MS.gene049828 | MS.gene44781 | 0.803462 | 3.45E-49 | -1.69E-46 |
| MS.gene05010 | MS.gene44781 | 0.841407 | 4.84E-58 | -1.69E-46 |
| MS.gene050163 | MS.gene44781 | 0.81472 | 1.33E-51 | -1.69E-46 |
| MS.gene050165 | MS.gene44781 | 0.817252 | 3.63E-52 | -1.69E-46 |
| MS.gene050216 | MS.gene44781 | 0.852249 | 5.23E-61 | -1.69E-46 |
| MS.gene050323 | MS.gene44781 | 0.830471 | 2.88E-55 | -1.69E-46 |
| MS.gene050333 | MS.gene44781 | 0.806123 | 9.58E-50 | -1.69E-46 |
| MS.gene050499 | MS.gene44781 | 0.803309 | 3.71E-49 | -1.69E-46 |
| MS.gene050502 | MS.gene44781 | 0.80474 | 1.87E-49 | -1.69E-46 |
| MS.gene050504 | MS.gene44781 | 0.843541 | 1.32E-58 | -1.69E-46 |
| MS.gene050518 | MS.gene44781 | 0.846166 | 2.58E-59 | -1.69E-46 |
| MS.gene050612 | MS.gene44781 | 0.853167 | 2.86E-61 | -1.69E-46 |
| MS.gene050675 | MS.gene44781 | 0.82367 | 1.22E-53 | -1.69E-46 |
| MS.gene050868 | MS.gene44781 | 0.829869 | 4.04E-55 | -1.69E-46 |
| MS.gene050871 | MS.gene44781 | 0.834708 | 2.56E-56 | -1.69E-46 |
| MS.gene050986 | MS.gene44781 | 0.863297 | 2.75E-64 | -1.69E-46 |
| MS.gene05118 | MS.gene44781 | 0.818371 | 2.03E-52 | -1.69E-46 |
| MS.gene051268 | MS.gene44781 | 0.802131 | 6.49E-49 | -1.69E-46 |
| MS.gene051509 | MS.gene44781 | 0.895586 | 8.33E-76 | -1.69E-46 |
| MS.gene051551 | MS.gene44781 | 0.824583 | 7.46E-54 | -1.69E-46 |
| MS.gene051810 | MS.gene44781 | 0.805245 | 1.47E-49 | -1.69E-46 |
| MS.gene052482 | MS.gene44781 | 0.802178 | 6.35E-49 | -1.69E-46 |
| MS.gene052486 | MS.gene44781 | 0.803652 | 3.15E-49 | -1.69E-46 |
| MS.gene053018 | MS.gene44781 | 0.812875 | 3.40E-51 | -1.69E-46 |
| MS.gene053213 | MS.gene44781 | 0.808714 | 2.70E-50 | -1.69E-46 |
| MS.gene053286 | MS.gene44781 | 0.814858 | 1.24E-51 | -1.69E-46 |
| MS.gene053420 | MS.gene44781 | -0.801413 | 9.11E-49 | -1.69E-46 |
| MS.gene053574 | MS.gene44781 | 0.806212 | 9.18E-50 | -1.69E-46 |
| MS.gene053626 | MS.gene44781 | 0.800969 | 1.12E-48 | -1.69E-46 |
| MS.gene053633 | MS.gene44781 | 0.809724 | 1.64E-50 | -1.69E-46 |
| MS.gene054595 | MS.gene44781 | 0.826945 | 2.05E-54 | -1.69E-46 |
| MS.gene054642 | MS.gene44781 | 0.814276 | 1.67E-51 | -1.69E-46 |
| MS.gene054954 | MS.gene44781 | 0.836749 | 7.80E-57 | -1.69E-46 |
| MS.gene055154 | MS.gene44781 | -0.802997 | 4.30E-49 | -1.69E-46 |
| MS.gene055362 | MS.gene44781 | 0.814181 | 1.76E-51 | -1.69E-46 |
| MS.gene055750 | MS.gene44781 | 0.815983 | 6.99E-52 | -1.69E-46 |
| MS.gene055751 | MS.gene44781 | 0.811643 | 6.32E-51 | -1.69E-46 |
| MS.gene055776 | MS.gene44781 | 0.867545 | 1.26E-65 | -1.69E-46 |
| MS.gene05589 | MS.gene44781 | 0.803746 | 3.01E-49 | -1.69E-46 |
| MS.gene056422 | MS.gene44781 | 0.808518 | 2.98E-50 | -1.69E-46 |
| MS.gene056446 | MS.gene44781 | 0.803397 | 3.56E-49 | -1.69E-46 |
| MS.gene056487 | MS.gene44781 | 0.800285 | 1.55E-48 | -1.69E-46 |
| MS.gene056504 | MS.gene44781 | 0.853835 | 1.84E-61 | -1.69E-46 |
| MS.gene056510 | MS.gene44781 | 0.843359 | 1.47E-58 | -1.69E-46 |
| MS.gene056657 | MS.gene44781 | 0.853365 | 2.51E-61 | -1.69E-46 |
| MS.gene057086 | MS.gene44781 | 0.804559 | 2.04E-49 | -1.69E-46 |
| MS.gene05753 | MS.gene44781 | 0.803395 | 3.56E-49 | -1.69E-46 |
| MS.gene057872 | MS.gene44781 | 0.810287 | 1.24E-50 | -1.69E-46 |
| MS.gene058041 | MS.gene44781 | 0.809559 | 1.78E-50 | -1.69E-46 |
| MS.gene058171 | MS.gene44781 | -0.817854 | 2.66E-52 | -1.69E-46 |
| MS.gene058173 | MS.gene44781 | -0.809029 | 2.32E-50 | -1.69E-46 |
| MS.gene058175 | MS.gene44781 | -0.81861 | 1.79E-52 | -1.69E-46 |
| MS.gene058419 | MS.gene44781 | 0.802051 | 6.74E-49 | -1.69E-46 |
| MS.gene058459 | MS.gene44781 | 0.843432 | 1.41E-58 | -1.69E-46 |
| MS.gene058773 | MS.gene44781 | 0.809825 | 1.56E-50 | -1.69E-46 |
| MS.gene059022 | MS.gene44781 | 0.829579 | 4.76E-55 | -1.69E-46 |
| MS.gene059045 | MS.gene44781 | -0.812334 | 4.47E-51 | -1.69E-46 |
| MS.gene05913 | MS.gene44781 | 0.814029 | 1.90E-51 | -1.69E-46 |
| MS.gene059305 | MS.gene44781 | 0.818173 | 2.25E-52 | -1.69E-46 |
| MS.gene059367 | MS.gene44781 | 0.857493 | 1.57E-62 | -1.69E-46 |
| MS.gene059677 | MS.gene44781 | 0.804536 | 2.06E-49 | -1.69E-46 |
| MS.gene059865 | MS.gene44781 | 0.883582 | 3.97E-71 | -1.69E-46 |
| MS.gene059943 | MS.gene44781 | -0.809705 | 1.66E-50 | -1.69E-46 |
| MS.gene060482 | MS.gene44781 | 0.817997 | 2.47E-52 | -1.69E-46 |
| MS.gene060778 | MS.gene44781 | 0.843624 | 1.25E-58 | -1.69E-46 |
| MS.gene06077 | MS.gene44781 | 0.812022 | 5.22E-51 | -1.69E-46 |
| MS.gene06097 | MS.gene44781 | 0.813226 | 2.85E-51 | -1.69E-46 |
| MS.gene060982 | MS.gene44781 | 0.828733 | 7.63E-55 | -1.69E-46 |
| MS.gene061134 | MS.gene44781 | 0.864974 | 8.26E-65 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene57909 | MS.gene44781 | PPI |
| MS.gene44781 | MS.gene018362 | PPI |
| MS.gene44781 | MS.gene75965 | PPI |
| MS.gene44781 | MS.gene022048 | PPI |
| MS.gene012430 | MS.gene44781 | PPI |
| MS.gene44781 | MS.gene62915 | PPI |
| MS.gene035678 | MS.gene44781 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44781.t1 | MTR_7g018170 | 91.067 | 403 | 24 | 5 | 1 | 398 | 1 | 396 | 0.0 | 624 |
| MS.gene44781.t1 | MTR_4g128930 | 38.386 | 409 | 165 | 14 | 24 | 398 | 20 | 375 | 5.46e-75 | 238 |
| MS.gene44781.t1 | MTR_1g013450 | 37.306 | 386 | 156 | 12 | 24 | 397 | 4 | 315 | 8.67e-69 | 220 |
| MS.gene44781.t1 | MTR_3g105710 | 37.500 | 384 | 134 | 11 | 23 | 397 | 3 | 289 | 1.80e-65 | 211 |
| MS.gene44781.t1 | MTR_7g083540 | 27.720 | 386 | 236 | 13 | 26 | 373 | 5 | 385 | 9.96e-22 | 96.3 |
| MS.gene44781.t1 | MTR_4g067320 | 43.478 | 92 | 43 | 1 | 26 | 108 | 5 | 96 | 2.14e-18 | 84.3 |
| MS.gene44781.t1 | MTR_4g067320 | 39.474 | 76 | 40 | 1 | 69 | 138 | 5 | 80 | 4.78e-11 | 62.8 |
| MS.gene44781.t1 | MTR_4g067320 | 43.478 | 92 | 43 | 1 | 26 | 108 | 5 | 96 | 2.22e-18 | 84.3 |
| MS.gene44781.t1 | MTR_4g067320 | 39.474 | 76 | 40 | 1 | 69 | 138 | 5 | 80 | 4.49e-11 | 63.2 |
| MS.gene44781.t1 | MTR_1g023260 | 41.935 | 93 | 44 | 1 | 26 | 108 | 5 | 97 | 7.71e-18 | 83.2 |
| MS.gene44781.t1 | MTR_5g021580 | 48.750 | 80 | 33 | 1 | 26 | 97 | 5 | 84 | 9.87e-18 | 80.9 |
| MS.gene44781.t1 | MTR_5g021580 | 48.750 | 80 | 33 | 1 | 26 | 97 | 5 | 84 | 1.04e-17 | 80.9 |
| MS.gene44781.t1 | MTR_1g023260 | 41.935 | 93 | 44 | 1 | 26 | 108 | 5 | 97 | 1.12e-17 | 80.9 |
| MS.gene44781.t1 | MTR_5g069480 | 42.857 | 91 | 52 | 0 | 26 | 116 | 5 | 95 | 2.40e-17 | 82.4 |
| MS.gene44781.t1 | MTR_5g069480 | 42.857 | 91 | 52 | 0 | 26 | 116 | 5 | 95 | 3.18e-17 | 83.2 |
| MS.gene44781.t1 | MTR_2g073370 | 43.478 | 92 | 43 | 1 | 26 | 108 | 5 | 96 | 4.04e-17 | 81.6 |
| MS.gene44781.t1 | MTR_7g108150 | 35.088 | 114 | 66 | 3 | 23 | 132 | 17 | 126 | 6.63e-17 | 82.0 |
| MS.gene44781.t1 | MTR_2g099010 | 40.217 | 92 | 46 | 1 | 26 | 108 | 5 | 96 | 2.15e-16 | 78.6 |
| MS.gene44781.t1 | MTR_2g099010 | 50.000 | 50 | 25 | 0 | 69 | 118 | 5 | 54 | 8.16e-11 | 62.4 |
| MS.gene44781.t1 | MTR_2g099010 | 40.217 | 92 | 46 | 1 | 26 | 108 | 5 | 96 | 2.26e-16 | 78.6 |
| MS.gene44781.t1 | MTR_2g099010 | 50.000 | 50 | 25 | 0 | 69 | 118 | 5 | 54 | 8.86e-11 | 62.0 |
| MS.gene44781.t1 | MTR_3g113070 | 33.333 | 111 | 63 | 1 | 26 | 125 | 5 | 115 | 3.87e-15 | 74.7 |
| MS.gene44781.t1 | MTR_4g071200 | 38.710 | 93 | 47 | 1 | 26 | 108 | 5 | 97 | 1.70e-14 | 72.8 |
| MS.gene44781.t1 | MTR_3g082630 | 41.758 | 91 | 52 | 1 | 26 | 116 | 5 | 94 | 3.31e-14 | 73.9 |
| MS.gene44781.t1 | MTR_3g117320 | 36.559 | 93 | 49 | 1 | 26 | 108 | 5 | 97 | 2.23e-13 | 69.3 |
| MS.gene44781.t1 | MTR_8g104190 | 32.620 | 187 | 91 | 5 | 204 | 372 | 232 | 401 | 9.03e-13 | 69.7 |
| MS.gene44781.t1 | MTR_1g109350 | 37.838 | 74 | 46 | 0 | 24 | 97 | 3 | 76 | 1.86e-11 | 65.5 |
| MS.gene44781.t1 | MTR_2g088900 | 35.165 | 91 | 59 | 0 | 16 | 106 | 91 | 181 | 3.76e-11 | 65.1 |
| MS.gene44781.t1 | MTR_1g110870 | 69.767 | 43 | 13 | 0 | 329 | 371 | 382 | 424 | 4.28e-11 | 64.7 |
| MS.gene44781.t1 | MTR_3g034680 | 47.368 | 57 | 25 | 1 | 58 | 114 | 4 | 55 | 5.46e-11 | 59.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44781.t1 | AT3G02380 | 53.904 | 397 | 108 | 11 | 19 | 398 | 9 | 347 | 4.21e-124 | 362 |
| MS.gene44781.t1 | AT5G15840 | 50.636 | 393 | 141 | 12 | 23 | 398 | 17 | 373 | 2.88e-111 | 331 |
| MS.gene44781.t1 | AT5G15850 | 50.250 | 400 | 136 | 8 | 16 | 398 | 2 | 355 | 6.96e-109 | 324 |
| MS.gene44781.t1 | AT5G24930 | 40.759 | 395 | 180 | 11 | 23 | 398 | 3 | 362 | 6.22e-74 | 234 |
| MS.gene44781.t1 | AT5G57660 | 42.239 | 393 | 154 | 15 | 23 | 398 | 19 | 355 | 2.11e-72 | 231 |
| MS.gene44781.t1 | AT2G24790 | 39.227 | 362 | 122 | 13 | 20 | 373 | 2 | 273 | 4.63e-67 | 215 |
| MS.gene44781.t1 | AT5G15840 | 46.909 | 275 | 105 | 7 | 23 | 289 | 17 | 258 | 3.69e-64 | 206 |
| MS.gene44781.t1 | AT2G24790 | 42.857 | 182 | 78 | 5 | 20 | 198 | 2 | 160 | 7.37e-41 | 144 |
| MS.gene44781.t1 | AT5G48250 | 28.075 | 374 | 219 | 12 | 26 | 370 | 5 | 357 | 4.78e-24 | 102 |
| MS.gene44781.t1 | AT1G78600 | 44.565 | 92 | 42 | 1 | 26 | 108 | 5 | 96 | 2.11e-18 | 85.5 |
| MS.gene44781.t1 | AT1G78600 | 44.565 | 92 | 42 | 1 | 26 | 108 | 5 | 96 | 2.59e-18 | 85.5 |
| MS.gene44781.t1 | AT1G06040 | 43.478 | 92 | 43 | 1 | 26 | 108 | 5 | 96 | 2.98e-17 | 81.3 |
| MS.gene44781.t1 | AT2G21320 | 47.500 | 80 | 34 | 1 | 26 | 97 | 5 | 84 | 6.23e-17 | 78.6 |
| MS.gene44781.t1 | AT2G47890 | 34.211 | 114 | 73 | 1 | 24 | 137 | 11 | 122 | 7.75e-17 | 80.9 |
| MS.gene44781.t1 | AT1G06040 | 43.478 | 92 | 43 | 1 | 26 | 108 | 5 | 96 | 8.91e-17 | 78.2 |
| MS.gene44781.t1 | AT2G47890 | 38.710 | 93 | 55 | 1 | 24 | 116 | 11 | 101 | 1.18e-16 | 79.3 |
| MS.gene44781.t1 | AT2G47890 | 38.710 | 93 | 55 | 1 | 24 | 116 | 11 | 101 | 1.34e-16 | 80.5 |
| MS.gene44781.t1 | AT4G38960 | 45.000 | 80 | 36 | 1 | 26 | 97 | 5 | 84 | 1.56e-16 | 77.4 |
| MS.gene44781.t1 | AT4G38960 | 45.000 | 80 | 36 | 1 | 26 | 97 | 5 | 84 | 1.56e-16 | 77.4 |
| MS.gene44781.t1 | AT2G33500 | 34.127 | 126 | 75 | 2 | 25 | 150 | 11 | 128 | 5.08e-16 | 79.7 |
| MS.gene44781.t1 | AT2G33500 | 63.043 | 46 | 17 | 0 | 328 | 373 | 356 | 401 | 1.31e-11 | 66.2 |
| MS.gene44781.t1 | AT2G33500 | 34.127 | 126 | 75 | 2 | 25 | 150 | 11 | 128 | 5.39e-16 | 79.7 |
| MS.gene44781.t1 | AT2G33500 | 63.043 | 46 | 17 | 0 | 328 | 373 | 355 | 400 | 1.34e-11 | 66.2 |
| MS.gene44781.t1 | AT2G31380 | 40.217 | 92 | 46 | 1 | 26 | 108 | 5 | 96 | 8.48e-16 | 76.6 |
| MS.gene44781.t1 | AT1G75540 | 37.895 | 95 | 47 | 1 | 26 | 108 | 5 | 99 | 1.35e-15 | 77.8 |
| MS.gene44781.t1 | AT3G21880 | 25.888 | 394 | 199 | 14 | 26 | 373 | 9 | 355 | 1.79e-15 | 77.8 |
| MS.gene44781.t1 | AT3G21880 | 25.888 | 394 | 199 | 14 | 26 | 373 | 9 | 355 | 1.79e-15 | 77.8 |
| MS.gene44781.t1 | AT3G21880 | 25.888 | 394 | 199 | 14 | 26 | 373 | 5 | 351 | 2.00e-15 | 77.4 |
| MS.gene44781.t1 | AT1G28050 | 35.922 | 103 | 63 | 1 | 26 | 128 | 9 | 108 | 1.82e-14 | 75.1 |
| MS.gene44781.t1 | AT1G73870 | 68.085 | 47 | 15 | 0 | 328 | 374 | 344 | 390 | 9.36e-13 | 69.7 |
| MS.gene44781.t1 | AT3G07650 | 43.056 | 72 | 41 | 0 | 26 | 97 | 5 | 76 | 1.19e-12 | 69.3 |
| MS.gene44781.t1 | AT3G07650 | 43.056 | 72 | 41 | 0 | 26 | 97 | 5 | 76 | 1.19e-12 | 69.3 |
| MS.gene44781.t1 | AT3G07650 | 43.056 | 72 | 41 | 0 | 26 | 97 | 5 | 76 | 1.19e-12 | 69.3 |
| MS.gene44781.t1 | AT3G07650 | 43.056 | 72 | 41 | 0 | 26 | 97 | 5 | 76 | 1.19e-12 | 69.3 |
| MS.gene44781.t1 | AT1G68190 | 34.000 | 100 | 61 | 2 | 24 | 123 | 41 | 135 | 1.34e-12 | 68.9 |
| MS.gene44781.t1 | AT1G68190 | 34.000 | 100 | 61 | 2 | 24 | 123 | 12 | 106 | 1.61e-12 | 68.6 |
| MS.gene44781.t1 | AT1G68190 | 34.000 | 100 | 61 | 2 | 24 | 123 | 12 | 106 | 1.61e-12 | 68.6 |
| MS.gene44781.t1 | AT4G15250 | 35.714 | 84 | 54 | 0 | 26 | 109 | 5 | 88 | 3.39e-12 | 67.4 |
| MS.gene44781.t1 | AT1G25440 | 34.722 | 144 | 56 | 4 | 248 | 371 | 278 | 403 | 3.50e-12 | 68.2 |
| MS.gene44781.t1 | AT4G10240 | 34.694 | 98 | 45 | 2 | 26 | 108 | 5 | 98 | 6.75e-12 | 63.9 |
| MS.gene44781.t1 | AT1G68520 | 65.217 | 46 | 16 | 0 | 329 | 374 | 357 | 402 | 1.30e-11 | 66.2 |
| MS.gene44781.t1 | AT4G39070 | 36.559 | 93 | 49 | 1 | 26 | 108 | 5 | 97 | 4.68e-11 | 63.2 |
| MS.gene44781.t1 | AT5G14370 | 47.619 | 63 | 33 | 0 | 311 | 373 | 276 | 338 | 5.38e-11 | 63.9 |
Find 103 sgRNAs with CRISPR-Local
Find 200 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTCCCGATTCTTCCAATTTC+GGG | 0.189546 | 7.4:+81973088 | MS.gene44781:CDS |
| CTCATCATGATGAGTATTAT+TGG | 0.214592 | 7.4:-81973434 | None:intergenic |
| CTTCATCTTCGGCACCTAAA+AGG | 0.221370 | 7.4:-81973135 | None:intergenic |
| TGGAGAAGTTGATGAGTATT+TGG | 0.234428 | 7.4:+81973363 | MS.gene44781:CDS |
| AATAGGTCAATTGTTCCTTT+TGG | 0.257022 | 7.4:-81975259 | None:intergenic |
| TGTCCCGATTCTTCCAATTT+CGG | 0.284602 | 7.4:+81973087 | MS.gene44781:CDS |
| CCTCGAGGCACGAACGCGTC+TGG | 0.290131 | 7.4:+81972942 | MS.gene44781:CDS |
| GAAACTCGGCCGCGTATAAA+AGG | 0.298232 | 7.4:+81975418 | MS.gene44781:CDS |
| CCACGTTGCCGCAGACCTTA+TGG | 0.314996 | 7.4:-81972807 | None:intergenic |
| TTGTTATTGATGTTCTTTAG+AGG | 0.325161 | 7.4:-81973271 | None:intergenic |
| CCAATTTCGGGTTACCTATA+CGG | 0.340122 | 7.4:+81973100 | MS.gene44781:CDS |
| ATGAAAATGAAGCTGCTTCA+TGG | 0.340820 | 7.4:+81973236 | MS.gene44781:CDS |
| GAAAATTTGAGAAAACAATT+AGG | 0.345101 | 7.4:+81975371 | MS.gene44781:CDS |
| AGCCGCCGGGGCACGCTCGC+AGG | 0.350184 | 7.4:-81972975 | None:intergenic |
| GGCTTTGTCGGCGGTGGTTG+TGG | 0.350451 | 7.4:+81973157 | MS.gene44781:CDS |
| CATAATCAAGAGGGTAATAA+TGG | 0.353323 | 7.4:+81973328 | MS.gene44781:CDS |
| TTTAACATCATTTCAGAAAG+AGG | 0.365033 | 7.4:-81975530 | None:intergenic |
| CTAATTACAGAAGTTGGATA+TGG | 0.366492 | 7.4:+81975499 | MS.gene44781:CDS |
| CCGTATAGGTAACCCGAAAT+TGG | 0.367447 | 7.4:-81973100 | None:intergenic |
| AGTGGACAAGTCACTTGTTC+AGG | 0.385352 | 7.4:+81974858 | MS.gene44781:CDS |
| TGGGAAGACATTTGAATAGA+AGG | 0.393236 | 7.4:-81975289 | None:intergenic |
| AGTCAACAACAAGATCATTA+TGG | 0.395164 | 7.4:+81973460 | MS.gene44781:CDS |
| GTCGGCGGTGGTTGTGGTGG+TGG | 0.399578 | 7.4:+81973163 | MS.gene44781:CDS |
| GAATAGAAGGACCTGAAAAT+AGG | 0.406008 | 7.4:-81975276 | None:intergenic |
| TGGTTGTGAGGTGGAGGAAG+AGG | 0.415419 | 7.4:+81973183 | MS.gene44781:CDS |
| TGGTGGTGGTTGTGAGGTGG+AGG | 0.415856 | 7.4:+81973177 | MS.gene44781:CDS |
| TAACCCGAAATTGGAAGAAT+CGG | 0.422897 | 7.4:-81973091 | None:intergenic |
| GAGTTTGAGTCTTCCAAAGC+TGG | 0.426808 | 7.4:+81973562 | MS.gene44781:CDS |
| GGTGGCTGTGGCTGAGGTGG+TGG | 0.428121 | 7.4:-81972786 | None:intergenic |
| GAAGAATCGGGACACGTTGA+TGG | 0.431550 | 7.4:-81973078 | None:intergenic |
| CCTTATGGTGGCTGTGGCTG+AGG | 0.436720 | 7.4:-81972792 | None:intergenic |
| ATTGTAACTGAATCCAGCTT+TGG | 0.441148 | 7.4:-81973575 | None:intergenic |
| TGTACCTGCTGTTGTTGAAC+AGG | 0.442029 | 7.4:-81973520 | None:intergenic |
| TGAAGGTGTTGATCATGATA+TGG | 0.443702 | 7.4:+81973210 | MS.gene44781:CDS |
| GATGAAGGCTTTGTCGGCGG+TGG | 0.445280 | 7.4:+81973151 | MS.gene44781:CDS |
| ACATCACTAATTACAGAAGT+TGG | 0.453991 | 7.4:+81975493 | MS.gene44781:CDS |
| CGCGGCAGAAAACCGCGCAT+GGG | 0.457653 | 7.4:-81972859 | None:intergenic |
| TTCATCTTCGGCACCTAAAA+GGG | 0.458034 | 7.4:-81973134 | None:intergenic |
| GGCCTGCGAGCGTGCCCCGG+CGG | 0.459298 | 7.4:+81972973 | MS.gene44781:CDS |
| GCCGACAAAGCCTTCATCTT+CGG | 0.465052 | 7.4:-81973146 | None:intergenic |
| TGAGGCCTGCGAGCGTGCCC+CGG | 0.465827 | 7.4:+81972970 | MS.gene44781:CDS |
| TTGTGGTGGTGGTTGTGAGG+TGG | 0.465870 | 7.4:+81973174 | MS.gene44781:CDS |
| CTCGAGGCACGAACGCGTCT+GGG | 0.468750 | 7.4:+81972943 | MS.gene44781:CDS |
| ACTCAGAGTTTACTGATAAG+TGG | 0.476306 | 7.4:+81974840 | MS.gene44781:intron |
| GCCGAAGATGAAGGCTTTGT+CGG | 0.477058 | 7.4:+81973145 | MS.gene44781:CDS |
| ACTCTTGCTTCTCTATCCAT+TGG | 0.478486 | 7.4:-81975319 | None:intergenic |
| GTGGAGGAAGAGGAGGATGA+AGG | 0.479258 | 7.4:+81973193 | MS.gene44781:CDS |
| TGGAGGTCTTGAATAGGTCA+TGG | 0.494897 | 7.4:-81975239 | None:intergenic |
| CGCAGACCTTATGGTGGCTG+TGG | 0.501654 | 7.4:-81972798 | None:intergenic |
| AAACAATTAGGTATGCTTCA+AGG | 0.513566 | 7.4:+81975383 | MS.gene44781:CDS |
| CCTCAGCCACAGCCACCATA+AGG | 0.513892 | 7.4:+81972792 | MS.gene44781:CDS |
| AACCCGAAATTGGAAGAATC+GGG | 0.527364 | 7.4:-81973090 | None:intergenic |
| TGGTTGTGGTGGTGGTTGTG+AGG | 0.528945 | 7.4:+81973171 | MS.gene44781:CDS |
| TTAACATCATTTCAGAAAGA+GGG | 0.529345 | 7.4:-81975529 | None:intergenic |
| GGGTGGCCGGAGGACCGTAT+AGG | 0.530363 | 7.4:-81973114 | None:intergenic |
| CTTTACAAAGAAAAGCCGCC+GGG | 0.532716 | 7.4:-81972988 | None:intergenic |
| TATGGTGGCTGTGGCTGAGG+TGG | 0.539082 | 7.4:-81972789 | None:intergenic |
| TTTGTCGGCGGTGGTTGTGG+TGG | 0.539334 | 7.4:+81973160 | MS.gene44781:CDS |
| GTGCCGCTCGGCCCCATGCG+CGG | 0.541980 | 7.4:+81972847 | MS.gene44781:CDS |
| GTTGATTGTAATTCTTGTGG+TGG | 0.542628 | 7.4:+81973391 | MS.gene44781:CDS |
| CTGTGGCTGAGGTGGTGGTG+AGG | 0.545540 | 7.4:-81972781 | None:intergenic |
| ACCTATTCAAGACCTCCAAA+AGG | 0.546280 | 7.4:+81975244 | MS.gene44781:CDS |
| GCGCGGCAGAAAACCGCGCA+TGG | 0.548669 | 7.4:-81972860 | None:intergenic |
| CGTTGATGGCGGCTTGCAAG+AGG | 0.550196 | 7.4:-81973064 | None:intergenic |
| AACTTCTGTAATTAGTGATG+TGG | 0.558143 | 7.4:-81975491 | None:intergenic |
| TCGGCACCTAAAAGGGTGGC+CGG | 0.561181 | 7.4:-81973127 | None:intergenic |
| TTGTGAGGTGGAGGAAGAGG+AGG | 0.565784 | 7.4:+81973186 | MS.gene44781:CDS |
| CTTGTTGATTGTAATTCTTG+TGG | 0.567671 | 7.4:+81973388 | MS.gene44781:CDS |
| CATAAGGTCTGCGGCAACGT+GGG | 0.569294 | 7.4:+81972808 | MS.gene44781:CDS |
| TGTTCCTGTTCAACAACAGC+AGG | 0.577069 | 7.4:+81973516 | MS.gene44781:CDS |
| AGCATGTGACACGTGCCGCT+CGG | 0.577146 | 7.4:+81972835 | MS.gene44781:CDS |
| ATAGAGAAGCAAGAGTCCTA+AGG | 0.578755 | 7.4:+81975326 | MS.gene44781:CDS |
| GTTCGTGCCTCGAGGCTACA+CGG | 0.579119 | 7.4:-81972934 | None:intergenic |
| GCGGCAGAAAACCGCGCATG+GGG | 0.588981 | 7.4:-81972858 | None:intergenic |
| GCTTTACAAAGAAAAGCCGC+CGG | 0.590036 | 7.4:-81972989 | None:intergenic |
| GGGTTACCTATACGGTCCTC+CGG | 0.593643 | 7.4:+81973108 | MS.gene44781:CDS |
| AATAACAACAACATTAGCAA+TGG | 0.607541 | 7.4:+81973304 | MS.gene44781:CDS |
| AAACCGCGCATGGGGCCGAG+CGG | 0.610346 | 7.4:-81972850 | None:intergenic |
| TAGCAATGGTCATAATCAAG+AGG | 0.613653 | 7.4:+81973318 | MS.gene44781:CDS |
| ACGCGGCCGAGTTTCAGCAT+AGG | 0.616320 | 7.4:-81975410 | None:intergenic |
| CCATAAGGTCTGCGGCAACG+TGG | 0.618452 | 7.4:+81972807 | MS.gene44781:CDS |
| GGAAAGCCTATGCTGAAACT+CGG | 0.623923 | 7.4:+81975404 | MS.gene44781:CDS |
| AAAGCTGGATTCAGTTACAA+TGG | 0.625769 | 7.4:+81973577 | MS.gene44781:CDS |
| AGCAATGGTCATAATCAAGA+GGG | 0.627143 | 7.4:+81973319 | MS.gene44781:CDS |
| CACAGCCACCATAAGGTCTG+CGG | 0.627512 | 7.4:+81972799 | MS.gene44781:CDS |
| GTTGATGGCGGCTTGCAAGA+GGG | 0.631032 | 7.4:-81973063 | None:intergenic |
| GTGGATATCAGCATCACAAG+TGG | 0.632088 | 7.4:-81973032 | None:intergenic |
| CACAAGAATTACAATCAACA+AGG | 0.639171 | 7.4:-81973387 | None:intergenic |
| AGGCTACACGGTTTGCCGCG+TGG | 0.644154 | 7.4:-81972922 | None:intergenic |
| ATCTTCGGCACCTAAAAGGG+TGG | 0.644787 | 7.4:-81973131 | None:intergenic |
| GTGGATGCGTGCATCACACG+CGG | 0.646833 | 7.4:-81972903 | None:intergenic |
| TTGCAAGAGGGTTAGCAGAG+TGG | 0.655218 | 7.4:-81973051 | None:intergenic |
| GAAGATGAAGGCTTTGTCGG+CGG | 0.655301 | 7.4:+81973148 | MS.gene44781:CDS |
| CGAACGCGTCTGGGTCTGTG+AGG | 0.656001 | 7.4:+81972952 | MS.gene44781:CDS |
| GCTGGATTCAGTTACAATGG+TGG | 0.656212 | 7.4:+81973580 | MS.gene44781:CDS |
| GAATCGGGACACGTTGATGG+CGG | 0.662257 | 7.4:-81973075 | None:intergenic |
| GCACCTAAAAGGGTGGCCGG+AGG | 0.665880 | 7.4:-81973124 | None:intergenic |
| CGTTGCCGCAGACCTTATGG+TGG | 0.670034 | 7.4:-81972804 | None:intergenic |
| GTGTGATGCACGCATCCACG+CGG | 0.684344 | 7.4:+81972907 | MS.gene44781:CDS |
| CGGCAAACCGTGTAGCCTCG+AGG | 0.686538 | 7.4:+81972927 | MS.gene44781:CDS |
| ATAAATATGCCGAATCTGCG+CGG | 0.687353 | 7.4:-81972877 | None:intergenic |
| TTTACAAAGAAAAGCCGCCG+GGG | 0.712447 | 7.4:-81972987 | None:intergenic |
| CCAGACGCGTTCGTGCCTCG+AGG | 0.721870 | 7.4:-81972942 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTGAAATATTTATCTTTAA+GGG | + | chr7.4:81974729-81974748 | MS.gene44781:intron | 10.0% |
| !! | TATTGAAATATTTATCTTTA+AGG | + | chr7.4:81974728-81974747 | MS.gene44781:intron | 10.0% |
| !! | TTAAAATTTATAAAGTTTGA+GGG | - | chr7.4:81973991-81974010 | None:intergenic | 10.0% |
| !! | GTTAAAATTTATAAAGTTTG+AGG | - | chr7.4:81973992-81974011 | None:intergenic | 15.0% |
| !! | TATTAGTGATAAAAAAAAGT+AGG | - | chr7.4:81975150-81975169 | None:intergenic | 15.0% |
| !!! | TGATTTTCTCAAATTATTAA+CGG | + | chr7.4:81974397-81974416 | MS.gene44781:intron | 15.0% |
| !!! | TTTTATGAAATTGTTGAAAA+TGG | - | chr7.4:81974236-81974255 | None:intergenic | 15.0% |
| !! | AAATACCTATTTGTAAACTA+AGG | - | chr7.4:81974051-81974070 | None:intergenic | 20.0% |
| !! | GAAAATTTGAGAAAACAATT+AGG | + | chr7.4:81975371-81975390 | MS.gene44781:CDS | 20.0% |
| !! | TTACTCAAAAGTGAAAATAA+TGG | + | chr7.4:81973827-81973846 | MS.gene44781:intron | 20.0% |
| !!! | AAGAAAAAGTGTAAAGAAAA+AGG | - | chr7.4:81974473-81974492 | None:intergenic | 20.0% |
| !!! | AATAATGGATTTTTGTTTAG+TGG | + | chr7.4:81973343-81973362 | MS.gene44781:CDS | 20.0% |
| !!! | AGAAAAAGTGTAAAGAAAAA+GGG | - | chr7.4:81974472-81974491 | None:intergenic | 20.0% |
| !!! | TATTCTAGAAAATTGATACT+TGG | - | chr7.4:81974606-81974625 | None:intergenic | 20.0% |
| !!! | TTTCATTTTCTTTTCTTATC+AGG | + | chr7.4:81975174-81975193 | MS.gene44781:intron | 20.0% |
| ! | AAAAAAGTAGGAGATATCAA+AGG | - | chr7.4:81975138-81975157 | None:intergenic | 25.0% |
| ! | AATAACAACAACATTAGCAA+TGG | + | chr7.4:81973304-81973323 | MS.gene44781:CDS | 25.0% |
| ! | CCAATAATTGTCATTCTTAT+CGG | - | chr7.4:81975056-81975075 | None:intergenic | 25.0% |
| ! | TATTTGTAAACTAAGGTTCT+GGG | - | chr7.4:81974044-81974063 | None:intergenic | 25.0% |
| ! | TCAGGTCTAATATTGTAAAT+TGG | + | chr7.4:81974876-81974895 | MS.gene44781:intron | 25.0% |
| ! | TTCAGTGTAATTATATGTGT+CGG | - | chr7.4:81974372-81974391 | None:intergenic | 25.0% |
| ! | TTTGAATTTGATATGCTTTG+TGG | + | chr7.4:81974091-81974110 | MS.gene44781:intron | 25.0% |
| !! | AATCTACAGAAGTCAATTTT+GGG | - | chr7.4:81974793-81974812 | None:intergenic | 25.0% |
| !! | GGACAAATTTTAAATCTTGT+CGG | - | chr7.4:81973870-81973889 | None:intergenic | 25.0% |
| !! | TTGTTATTGATGTTCTTTAG+AGG | - | chr7.4:81973274-81973293 | None:intergenic | 25.0% |
| !!! | TCTTTACACTTTTTCTTTAG+TGG | + | chr7.4:81974476-81974495 | MS.gene44781:intron | 25.0% |
| !!! | TTGTTTTGTTTGCAATTGTT+TGG | + | chr7.4:81973685-81973704 | MS.gene44781:intron | 25.0% |
| AAAAAGGGTAAAGAGCTATA+CGG | - | chr7.4:81974457-81974476 | None:intergenic | 30.0% | |
| AAACAATCTAGTCTAGGAAA+CGG | - | chr7.4:81974212-81974231 | None:intergenic | 30.0% | |
| AAACAATTAGGTATGCTTCA+AGG | + | chr7.4:81975383-81975402 | MS.gene44781:CDS | 30.0% | |
| AACTTCTGTAATTAGTGATG+TGG | - | chr7.4:81975494-81975513 | None:intergenic | 30.0% | |
| ACATCACTAATTACAGAAGT+TGG | + | chr7.4:81975493-81975512 | MS.gene44781:CDS | 30.0% | |
| AGTCAACAACAAGATCATTA+TGG | + | chr7.4:81973460-81973479 | MS.gene44781:CDS | 30.0% | |
| ATCGGTAAGAACATAAATCT+TGG | - | chr7.4:81975038-81975057 | None:intergenic | 30.0% | |
| CACAAGAATTACAATCAACA+AGG | - | chr7.4:81973390-81973409 | None:intergenic | 30.0% | |
| CAGAACCTTAGTTTACAAAT+AGG | + | chr7.4:81974043-81974062 | MS.gene44781:intron | 30.0% | |
| CAGTTTCAATTAGTGTTACA+TGG | + | chr7.4:81975082-81975101 | MS.gene44781:intron | 30.0% | |
| CATAATCAAGAGGGTAATAA+TGG | + | chr7.4:81973328-81973347 | MS.gene44781:CDS | 30.0% | |
| CCGATAAGAATGACAATTAT+TGG | + | chr7.4:81975053-81975072 | MS.gene44781:intron | 30.0% | |
| CTAATTACAGAAGTTGGATA+TGG | + | chr7.4:81975499-81975518 | MS.gene44781:CDS | 30.0% | |
| CTATTTGTAAACTAAGGTTC+TGG | - | chr7.4:81974045-81974064 | None:intergenic | 30.0% | |
| CTCATCATGATGAGTATTAT+TGG | - | chr7.4:81973437-81973456 | None:intergenic | 30.0% | |
| GGATCGCAATATTTAAACAA+AGG | + | chr7.4:81974897-81974916 | MS.gene44781:intron | 30.0% | |
| TACTACTAAAGTGGACAAAT+TGG | + | chr7.4:81973921-81973940 | MS.gene44781:intron | 30.0% | |
| TATAAAGCTCGAATACTCAT+CGG | + | chr7.4:81974305-81974324 | MS.gene44781:intron | 30.0% | |
| TCAAACTCTTACTACTAAAG+TGG | + | chr7.4:81973912-81973931 | MS.gene44781:intron | 30.0% | |
| TCTATCCATTGGAGAAAAAT+GGG | - | chr7.4:81975311-81975330 | None:intergenic | 30.0% | |
| TCTCAAATTATTAACGGTGT+CGG | + | chr7.4:81974403-81974422 | MS.gene44781:intron | 30.0% | |
| TGTTTGCAATTGTTTGGAAA+GGG | + | chr7.4:81973691-81973710 | MS.gene44781:intron | 30.0% | |
| TTGTTTGCAATTGTTTGGAA+AGG | + | chr7.4:81973690-81973709 | MS.gene44781:intron | 30.0% | |
| ! | AATAGGTCAATTGTTCCTTT+TGG | - | chr7.4:81975262-81975281 | None:intergenic | 30.0% |
| ! | AGGTACAGAATTTTCAACTT+GGG | + | chr7.4:81973536-81973555 | MS.gene44781:CDS | 30.0% |
| ! | AGTGGACAAATTGGTATTTT+TGG | + | chr7.4:81973930-81973949 | MS.gene44781:intron | 30.0% |
| ! | ATCTACAGAAGTCAATTTTG+GGG | - | chr7.4:81974792-81974811 | None:intergenic | 30.0% |
| ! | ATTTTAAATCTTGTCGGAGA+CGG | - | chr7.4:81973864-81973883 | None:intergenic | 30.0% |
| ! | CTTGTTGATTGTAATTCTTG+TGG | + | chr7.4:81973388-81973407 | MS.gene44781:CDS | 30.0% |
| ! | GAATCTACAGAAGTCAATTT+TGG | - | chr7.4:81974794-81974813 | None:intergenic | 30.0% |
| !! | TGCTGTTGTTAATTTGCATT+TGG | + | chr7.4:81974165-81974184 | MS.gene44781:intron | 30.0% |
| !!! | TACACTTTTTCTTTAGTGGA+AGG | + | chr7.4:81974480-81974499 | MS.gene44781:intron | 30.0% |
| AAAGCTGGATTCAGTTACAA+TGG | + | chr7.4:81973577-81973596 | MS.gene44781:CDS | 35.0% | |
| AAGTATCATGCTTTCTTGCT+AGG | + | chr7.4:81974515-81974534 | MS.gene44781:intron | 35.0% | |
| AATGGCAAACAATCTAGTCT+AGG | - | chr7.4:81974218-81974237 | None:intergenic | 35.0% | |
| ACTCAGAGTTTACTGATAAG+TGG | + | chr7.4:81974840-81974859 | MS.gene44781:intron | 35.0% | |
| AGCAATGGTCATAATCAAGA+GGG | + | chr7.4:81973319-81973338 | MS.gene44781:CDS | 35.0% | |
| ATGAAAATGAAGCTGCTTCA+TGG | + | chr7.4:81973236-81973255 | MS.gene44781:CDS | 35.0% | |
| ATTGTAACTGAATCCAGCTT+TGG | - | chr7.4:81973578-81973597 | None:intergenic | 35.0% | |
| CTCTATCCATTGGAGAAAAA+TGG | - | chr7.4:81975312-81975331 | None:intergenic | 35.0% | |
| CTTGAAGCCATTTACTAGTA+CGG | + | chr7.4:81974628-81974647 | MS.gene44781:intron | 35.0% | |
| GAATAGAAGGACCTGAAAAT+AGG | - | chr7.4:81975279-81975298 | None:intergenic | 35.0% | |
| GTTCCTCAAAAAAGCTATGT+GGG | + | chr7.4:81973484-81973503 | MS.gene44781:CDS | 35.0% | |
| GTTGATTGTAATTCTTGTGG+TGG | + | chr7.4:81973391-81973410 | MS.gene44781:CDS | 35.0% | |
| TAACCCGAAATTGGAAGAAT+CGG | - | chr7.4:81973094-81973113 | None:intergenic | 35.0% | |
| TAGCAATGGTCATAATCAAG+AGG | + | chr7.4:81973318-81973337 | MS.gene44781:CDS | 35.0% | |
| TCAGGTTTCAGTTTCATCAA+TGG | + | chr7.4:81975192-81975211 | MS.gene44781:intron | 35.0% | |
| TCAGTTTCATCAATGGATGT+TGG | + | chr7.4:81975199-81975218 | MS.gene44781:intron | 35.0% | |
| TCTTTAGTGGAAGGAATCTA+AGG | + | chr7.4:81974489-81974508 | MS.gene44781:intron | 35.0% | |
| TGGGAAGACATTTGAATAGA+AGG | - | chr7.4:81975292-81975311 | None:intergenic | 35.0% | |
| TGTTCCTCAAAAAAGCTATG+TGG | + | chr7.4:81973483-81973502 | MS.gene44781:CDS | 35.0% | |
| TGTTGTTCCGTACTAGTAAA+TGG | - | chr7.4:81974638-81974657 | None:intergenic | 35.0% | |
| TGTTTGGAAAGGGTTGAAAT+TGG | + | chr7.4:81973701-81973720 | MS.gene44781:intron | 35.0% | |
| TTCCTCAATACCAATTCAAG+AGG | - | chr7.4:81973793-81973812 | None:intergenic | 35.0% | |
| ! | ACAAGTACAAGTAGTGTTGA+AGG | + | chr7.4:81974655-81974674 | MS.gene44781:intron | 35.0% |
| ! | ACAGAATTTTCAACTTGGGT+TGG | + | chr7.4:81973540-81973559 | MS.gene44781:CDS | 35.0% |
| ! | CAGGTACAGAATTTTCAACT+TGG | + | chr7.4:81973535-81973554 | MS.gene44781:CDS | 35.0% |
| ! | CTTGAATTGGTATTGAGGAA+GGG | + | chr7.4:81973793-81973812 | MS.gene44781:intron | 35.0% |
| ! | GGAACAATTGACCTATTTTC+AGG | + | chr7.4:81975265-81975284 | MS.gene44781:CDS | 35.0% |
| ! | TACTACAGTCACTTTGCAAT+AGG | + | chr7.4:81974935-81974954 | MS.gene44781:intron | 35.0% |
| ! | TAGCAAGAAAGCATGATACT+TGG | - | chr7.4:81974516-81974535 | None:intergenic | 35.0% |
| ! | TCTACAGAAGTCAATTTTGG+GGG | - | chr7.4:81974791-81974810 | None:intergenic | 35.0% |
| ! | TCTTGAATTGGTATTGAGGA+AGG | + | chr7.4:81973792-81973811 | MS.gene44781:intron | 35.0% |
| ! | TCTTTTTCTCTCTGTACCTT+AGG | - | chr7.4:81975345-81975364 | None:intergenic | 35.0% |
| !! | ATTTTGGGGGAATTAGATTC+TGG | - | chr7.4:81974778-81974797 | None:intergenic | 35.0% |
| !! | TCTAGGAAACGGATTATGTA+GGG | - | chr7.4:81974201-81974220 | None:intergenic | 35.0% |
| !! | TGAAGGTGTTGATCATGATA+TGG | + | chr7.4:81973210-81973229 | MS.gene44781:CDS | 35.0% |
| !! | TGGAGAAGTTGATGAGTATT+TGG | + | chr7.4:81973363-81973382 | MS.gene44781:CDS | 35.0% |
| AACCCGAAATTGGAAGAATC+GGG | - | chr7.4:81973093-81973112 | None:intergenic | 40.0% | |
| ACCTATTCAAGACCTCCAAA+AGG | + | chr7.4:81975244-81975263 | MS.gene44781:CDS | 40.0% | |
| ACTCTTGCTTCTCTATCCAT+TGG | - | chr7.4:81975322-81975341 | None:intergenic | 40.0% | |
| AGAGGCTCAAGATCTTGAAT+TGG | - | chr7.4:81973775-81973794 | None:intergenic | 40.0% | |
| AGATCTTGAGCCTCTTGAAT+TGG | + | chr7.4:81973780-81973799 | MS.gene44781:intron | 40.0% | |
| AGCCTCTTGAATTGGTATTG+AGG | + | chr7.4:81973788-81973807 | MS.gene44781:intron | 40.0% | |
| ATAAATATGCCGAATCTGCG+CGG | - | chr7.4:81972880-81972899 | None:intergenic | 40.0% | |
| ATAGAGAAGCAAGAGTCCTA+AGG | + | chr7.4:81975326-81975345 | MS.gene44781:CDS | 40.0% | |
| CATGCTTTCTTGCTAGGAAA+CGG | + | chr7.4:81974521-81974540 | MS.gene44781:intron | 40.0% | |
| TGTCCCGATTCTTCCAATTT+CGG | + | chr7.4:81973087-81973106 | MS.gene44781:CDS | 40.0% | |
| TTCATCTTCGGCACCTAAAA+GGG | - | chr7.4:81973137-81973156 | None:intergenic | 40.0% | |
| TTGGAAAGGGTTGAAATTGG+TGG | + | chr7.4:81973704-81973723 | MS.gene44781:intron | 40.0% | |
| ! | AGGTCAATTGTTCCTTTTGG+AGG | - | chr7.4:81975259-81975278 | None:intergenic | 40.0% |
| ! | GAATAGGTCATGGTTGATTC+TGG | - | chr7.4:81975232-81975251 | None:intergenic | 40.0% |
| !! | CCAATTTCGGGTTACCTATA+CGG | + | chr7.4:81973100-81973119 | MS.gene44781:CDS | 40.0% |
| !! | GTCTAGGAAACGGATTATGT+AGG | - | chr7.4:81974202-81974221 | None:intergenic | 40.0% |
| !! | GTCTTCCCATTTTTCTCCAA+TGG | + | chr7.4:81975303-81975322 | MS.gene44781:CDS | 40.0% |
| !! | TCCTTTTGGAGGTCTTGAAT+AGG | - | chr7.4:81975248-81975267 | None:intergenic | 40.0% |
| !!! | TCACCCACATAGCTTTTTTG+AGG | - | chr7.4:81973490-81973509 | None:intergenic | 40.0% |
| AACCACAGTTCGCGTAATTG+CGG | + | chr7.4:81973957-81973976 | MS.gene44781:intron | 45.0% | |
| ACAACAGCATGTCAGTCATG+TGG | - | chr7.4:81974154-81974173 | None:intergenic | 45.0% | |
| AGTGGACAAGTCACTTGTTC+AGG | + | chr7.4:81974858-81974877 | MS.gene44781:CDS | 45.0% | |
| CCGTATAGGTAACCCGAAAT+TGG | - | chr7.4:81973103-81973122 | None:intergenic | 45.0% | |
| CTTCATCTTCGGCACCTAAA+AGG | - | chr7.4:81973138-81973157 | None:intergenic | 45.0% | |
| CTTTACAAAGAAAAGCCGCC+GGG | - | chr7.4:81972991-81973010 | None:intergenic | 45.0% | |
| GAGTTTGAGTCTTCCAAAGC+TGG | + | chr7.4:81973562-81973581 | MS.gene44781:CDS | 45.0% | |
| GCTCGAATACTCATCGGATT+AGG | + | chr7.4:81974311-81974330 | MS.gene44781:intron | 45.0% | |
| GCTGGATTCAGTTACAATGG+TGG | + | chr7.4:81973580-81973599 | MS.gene44781:CDS | 45.0% | |
| GCTTTACAAAGAAAAGCCGC+CGG | - | chr7.4:81972992-81973011 | None:intergenic | 45.0% | |
| GGAAAGCCTATGCTGAAACT+CGG | + | chr7.4:81975404-81975423 | MS.gene44781:CDS | 45.0% | |
| GGTAAAGAGCTATACGGACA+CGG | - | chr7.4:81974451-81974470 | None:intergenic | 45.0% | |
| GTCCCGATTCTTCCAATTTC+GGG | + | chr7.4:81973088-81973107 | MS.gene44781:CDS | 45.0% | |
| GTGGATATCAGCATCACAAG+TGG | - | chr7.4:81973035-81973054 | None:intergenic | 45.0% | |
| TGGAGGTCTTGAATAGGTCA+TGG | - | chr7.4:81975242-81975261 | None:intergenic | 45.0% | |
| TGTACCTGCTGTTGTTGAAC+AGG | - | chr7.4:81973523-81973542 | None:intergenic | 45.0% | |
| TGTTCCTGTTCAACAACAGC+AGG | + | chr7.4:81973516-81973535 | MS.gene44781:CDS | 45.0% | |
| TTGGGGGAATTAGATTCTGG+AGG | - | chr7.4:81974775-81974794 | None:intergenic | 45.0% | |
| TTTACAAAGAAAAGCCGCCG+GGG | - | chr7.4:81972990-81973009 | None:intergenic | 45.0% | |
| ! | GCGAATCGACCTTTTATACG+CGG | - | chr7.4:81975430-81975449 | None:intergenic | 45.0% |
| !!! | CTTTTAGGTGCCGAAGATGA+AGG | + | chr7.4:81973136-81973155 | MS.gene44781:CDS | 45.0% |
| !! | AAAAAATTTATTATGTATAT+TGG | - | chr7.4:81974565-81974584 | None:intergenic | 5.0% |
| !! | ATTATAAATTATAATCTAAA+AGG | - | chr7.4:81973891-81973910 | None:intergenic | 5.0% |
| ATCTTCGGCACCTAAAAGGG+TGG | - | chr7.4:81973134-81973153 | None:intergenic | 50.0% | |
| CAGCATGTCAGTCATGTGGA+AGG | - | chr7.4:81974150-81974169 | None:intergenic | 50.0% | |
| GAAACTCGGCCGCGTATAAA+AGG | + | chr7.4:81975418-81975437 | MS.gene44781:CDS | 50.0% | |
| GAAGAATCGGGACACGTTGA+TGG | - | chr7.4:81973081-81973100 | None:intergenic | 50.0% | |
| GCCGACAAAGCCTTCATCTT+CGG | - | chr7.4:81973149-81973168 | None:intergenic | 50.0% | |
| ! | GAAGATGAAGGCTTTGTCGG+CGG | + | chr7.4:81973148-81973167 | MS.gene44781:CDS | 50.0% |
| ! | GCCGAAGATGAAGGCTTTGT+CGG | + | chr7.4:81973145-81973164 | MS.gene44781:CDS | 50.0% |
| ! | GGGGAATTAGATTCTGGAGG+TGG | - | chr7.4:81974772-81974791 | None:intergenic | 50.0% |
| ! | TCATCGGATTAGGCGTGTCT+CGG | + | chr7.4:81974321-81974340 | MS.gene44781:intron | 50.0% |
| ! | TTGCAAGAGGGTTAGCAGAG+TGG | - | chr7.4:81973054-81973073 | None:intergenic | 50.0% |
| !! | TATTAACGGTGTCGGCGTGT+CGG | + | chr7.4:81974411-81974430 | MS.gene44781:intron | 50.0% |
| ATACGGACACGGACACGACT+CGG | - | chr7.4:81974440-81974459 | None:intergenic | 55.0% | |
| CACAGCCACCATAAGGTCTG+CGG | + | chr7.4:81972799-81972818 | MS.gene44781:CDS | 55.0% | |
| CATAAGGTCTGCGGCAACGT+GGG | + | chr7.4:81972808-81972827 | MS.gene44781:CDS | 55.0% | |
| CTCCGCAATTACGCGAACTG+TGG | - | chr7.4:81973962-81973981 | None:intergenic | 55.0% | |
| GGGTTACCTATACGGTCCTC+CGG | + | chr7.4:81973108-81973127 | MS.gene44781:CDS | 55.0% | |
| GTGGAGGAAGAGGAGGATGA+AGG | + | chr7.4:81973193-81973212 | MS.gene44781:CDS | 55.0% | |
| TGGTTGTGAGGTGGAGGAAG+AGG | + | chr7.4:81973183-81973202 | MS.gene44781:CDS | 55.0% | |
| TTGTGAGGTGGAGGAAGAGG+AGG | + | chr7.4:81973186-81973205 | MS.gene44781:CDS | 55.0% | |
| ! | GAATCGGGACACGTTGATGG+CGG | - | chr7.4:81973078-81973097 | None:intergenic | 55.0% |
| ! | GATTAGGCGTGTCTCGGTGT+CGG | + | chr7.4:81974327-81974346 | MS.gene44781:intron | 55.0% |
| ! | GGTTTTCTGCCGCGCAGATT+CGG | + | chr7.4:81972868-81972887 | MS.gene44781:CDS | 55.0% |
| !! | GTTGATGGCGGCTTGCAAGA+GGG | - | chr7.4:81973066-81973085 | None:intergenic | 55.0% |
| !! | TGGTTGTGGTGGTGGTTGTG+AGG | + | chr7.4:81973171-81973190 | MS.gene44781:CDS | 55.0% |
| !! | TTGTGGTGGTGGTTGTGAGG+TGG | + | chr7.4:81973174-81973193 | MS.gene44781:CDS | 55.0% |
| ACGCGGCCGAGTTTCAGCAT+AGG | - | chr7.4:81975413-81975432 | None:intergenic | 60.0% | |
| CCACGTTGCCGCAGACCTTA+TGG | - | chr7.4:81972810-81972829 | None:intergenic | 60.0% | |
| CCATAAGGTCTGCGGCAACG+TGG | + | chr7.4:81972807-81972826 | MS.gene44781:CDS | 60.0% | |
| CCTCAGCCACAGCCACCATA+AGG | + | chr7.4:81972792-81972811 | MS.gene44781:CDS | 60.0% | |
| CCTTATGGTGGCTGTGGCTG+AGG | - | chr7.4:81972795-81972814 | None:intergenic | 60.0% | |
| CGCAGACCTTATGGTGGCTG+TGG | - | chr7.4:81972801-81972820 | None:intergenic | 60.0% | |
| CGTTGCCGCAGACCTTATGG+TGG | - | chr7.4:81972807-81972826 | None:intergenic | 60.0% | |
| GTGGATGCGTGCATCACACG+CGG | - | chr7.4:81972906-81972925 | None:intergenic | 60.0% | |
| GTGTGATGCACGCATCCACG+CGG | + | chr7.4:81972907-81972926 | MS.gene44781:CDS | 60.0% | |
| GTTCGTGCCTCGAGGCTACA+CGG | - | chr7.4:81972937-81972956 | None:intergenic | 60.0% | |
| TATGGTGGCTGTGGCTGAGG+TGG | - | chr7.4:81972792-81972811 | None:intergenic | 60.0% | |
| TCGGCACCTAAAAGGGTGGC+CGG | - | chr7.4:81973130-81973149 | None:intergenic | 60.0% | |
| TTTGTCGGCGGTGGTTGTGG+TGG | + | chr7.4:81973160-81973179 | MS.gene44781:CDS | 60.0% | |
| ! | AGCATGTGACACGTGCCGCT+CGG | + | chr7.4:81972835-81972854 | MS.gene44781:CDS | 60.0% |
| ! | GATGAAGGCTTTGTCGGCGG+TGG | + | chr7.4:81973151-81973170 | MS.gene44781:CDS | 60.0% |
| !! | CGTTGATGGCGGCTTGCAAG+AGG | - | chr7.4:81973067-81973086 | None:intergenic | 60.0% |
| !! | TGGTGGTGGTTGTGAGGTGG+AGG | + | chr7.4:81973177-81973196 | MS.gene44781:CDS | 60.0% |
| AGGCTACACGGTTTGCCGCG+TGG | - | chr7.4:81972925-81972944 | None:intergenic | 65.0% | |
| CGAACGCGTCTGGGTCTGTG+AGG | + | chr7.4:81972952-81972971 | MS.gene44781:CDS | 65.0% | |
| CGCGGCAGAAAACCGCGCAT+GGG | - | chr7.4:81972862-81972881 | None:intergenic | 65.0% | |
| CGGCAAACCGTGTAGCCTCG+AGG | + | chr7.4:81972927-81972946 | MS.gene44781:CDS | 65.0% | |
| CTCGAGGCACGAACGCGTCT+GGG | + | chr7.4:81972943-81972962 | MS.gene44781:CDS | 65.0% | |
| GCACCTAAAAGGGTGGCCGG+AGG | - | chr7.4:81973127-81973146 | None:intergenic | 65.0% | |
| GCGGCAGAAAACCGCGCATG+GGG | - | chr7.4:81972861-81972880 | None:intergenic | 65.0% | |
| ! | CTGTGGCTGAGGTGGTGGTG+AGG | - | chr7.4:81972784-81972803 | None:intergenic | 65.0% |
| ! | GGCTTTGTCGGCGGTGGTTG+TGG | + | chr7.4:81973157-81973176 | MS.gene44781:CDS | 65.0% |
| ! | GGTCCTCCGGCCACCCTTTT+AGG | + | chr7.4:81973121-81973140 | MS.gene44781:CDS | 65.0% |
| AAACCGCGCATGGGGCCGAG+CGG | - | chr7.4:81972853-81972872 | None:intergenic | 70.0% | |
| CCAGACGCGTTCGTGCCTCG+AGG | - | chr7.4:81972945-81972964 | None:intergenic | 70.0% | |
| CCTCGAGGCACGAACGCGTC+TGG | + | chr7.4:81972942-81972961 | MS.gene44781:CDS | 70.0% | |
| GCGCGGCAGAAAACCGCGCA+TGG | - | chr7.4:81972863-81972882 | None:intergenic | 70.0% | |
| GGGTGGCCGGAGGACCGTAT+AGG | - | chr7.4:81973117-81973136 | None:intergenic | 70.0% | |
| GGTGGCTGTGGCTGAGGTGG+TGG | - | chr7.4:81972789-81972808 | None:intergenic | 70.0% | |
| GTCGGCGGTGGTTGTGGTGG+TGG | + | chr7.4:81973163-81973182 | MS.gene44781:CDS | 70.0% | |
| TGAGGCCTGCGAGCGTGCCC+CGG | + | chr7.4:81972970-81972989 | MS.gene44781:CDS | 75.0% | |
| !! | GTGCCGCTCGGCCCCATGCG+CGG | + | chr7.4:81972847-81972866 | MS.gene44781:CDS | 80.0% |
| ! | AGCCGCCGGGGCACGCTCGC+AGG | - | chr7.4:81972978-81972997 | None:intergenic | 85.0% |
| ! | GGCCTGCGAGCGTGCCCCGG+CGG | + | chr7.4:81972973-81972992 | MS.gene44781:CDS | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.4 | gene | 81972764 | 81975540 | 81972764 | ID=MS.gene44781 |
| chr7.4 | mRNA | 81972764 | 81975540 | 81972764 | ID=MS.gene44781.t1;Parent=MS.gene44781 |
| chr7.4 | exon | 81972764 | 81973618 | 81972764 | ID=MS.gene44781.t1.exon1;Parent=MS.gene44781.t1 |
| chr7.4 | CDS | 81972764 | 81973618 | 81972764 | ID=cds.MS.gene44781.t1;Parent=MS.gene44781.t1 |
| chr7.4 | exon | 81974846 | 81974879 | 81974846 | ID=MS.gene44781.t1.exon2;Parent=MS.gene44781.t1 |
| chr7.4 | CDS | 81974846 | 81974879 | 81974846 | ID=cds.MS.gene44781.t1;Parent=MS.gene44781.t1 |
| chr7.4 | exon | 81975233 | 81975540 | 81975233 | ID=MS.gene44781.t1.exon3;Parent=MS.gene44781.t1 |
| chr7.4 | CDS | 81975233 | 81975540 | 81975233 | ID=cds.MS.gene44781.t1;Parent=MS.gene44781.t1 |
| Gene Sequence |
| Protein sequence |
