Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene074335.t1 | XP_003597231.1 | 94.7 | 533 | 22 | 2 | 1 | 528 | 1 | 532 | 5.90E-280 | 973 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene074335.t1 | Q9FF55 | 65.5 | 556 | 165 | 5 | 2 | 530 | 4 | 559 | 2.0e-212 | 740.0 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene074335.t1 | G7IRR6 | 94.7 | 533 | 22 | 2 | 1 | 528 | 1 | 532 | 4.2e-280 | 973.0 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene058947 | MS.gene074335 | 0.883912 | 3.00E-71 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene074335 | MS.gene022334 | PPI |
MS.gene037185 | MS.gene074335 | PPI |
MS.gene074335 | MS.gene76495 | PPI |
MS.gene049245 | MS.gene074335 | PPI |
MS.gene013275 | MS.gene074335 | PPI |
MS.gene074335 | MS.gene025228 | PPI |
MS.gene074335 | MS.gene47817 | PPI |
MS.gene85112 | MS.gene074335 | PPI |
MS.gene074335 | MS.gene057716 | PPI |
MS.gene074335 | MS.gene06356 | PPI |
MS.gene64440 | MS.gene074335 | PPI |
MS.gene003513 | MS.gene074335 | PPI |
MS.gene75421 | MS.gene074335 | PPI |
MS.gene25997 | MS.gene074335 | PPI |
MS.gene013810 | MS.gene074335 | PPI |
MS.gene074335 | MS.gene70661 | PPI |
MS.gene074335 | MS.gene52083 | PPI |
MS.gene045060 | MS.gene074335 | PPI |
MS.gene074335 | MS.gene91774 | PPI |
MS.gene074335 | MS.gene36312 | PPI |
MS.gene074335 | MS.gene90970 | PPI |
MS.gene40930 | MS.gene074335 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene074335.t1 | MTR_2g094180 | 94.495 | 545 | 24 | 2 | 21 | 560 | 21 | 564 | 0.0 | 998 |
MS.gene074335.t1 | MTR_4g059450 | 71.201 | 566 | 139 | 5 | 14 | 560 | 23 | 583 | 0.0 | 771 |
MS.gene074335.t1 | MTR_2g101880 | 33.850 | 452 | 291 | 3 | 84 | 528 | 67 | 517 | 1.83e-92 | 293 |
MS.gene074335.t1 | MTR_3g088220 | 36.239 | 436 | 251 | 14 | 81 | 496 | 35 | 463 | 2.42e-71 | 238 |
MS.gene074335.t1 | MTR_3g088220 | 43.023 | 86 | 47 | 2 | 74 | 157 | 372 | 457 | 1.78e-13 | 73.6 |
MS.gene074335.t1 | MTR_2g093500 | 28.612 | 353 | 212 | 4 | 170 | 522 | 199 | 511 | 5.48e-49 | 177 |
MS.gene074335.t1 | MTR_1g087520 | 37.297 | 185 | 103 | 5 | 315 | 497 | 61 | 234 | 5.51e-23 | 101 |
MS.gene074335.t1 | MTR_1g087520 | 32.738 | 168 | 88 | 4 | 84 | 227 | 34 | 200 | 4.82e-17 | 83.6 |
MS.gene074335.t1 | MTR_1g087520 | 35.185 | 108 | 65 | 3 | 421 | 526 | 38 | 142 | 2.27e-13 | 72.0 |
MS.gene074335.t1 | MTR_1g096790 | 29.107 | 347 | 208 | 12 | 72 | 396 | 20 | 350 | 2.60e-21 | 97.1 |
MS.gene074335.t1 | MTR_7g112040 | 39.306 | 173 | 78 | 6 | 80 | 227 | 25 | 195 | 1.60e-20 | 94.0 |
MS.gene074335.t1 | MTR_7g112040 | 35.135 | 185 | 107 | 5 | 315 | 497 | 56 | 229 | 1.48e-19 | 90.9 |
MS.gene074335.t1 | MTR_7g112040 | 53.086 | 81 | 34 | 3 | 81 | 158 | 144 | 223 | 5.79e-16 | 80.1 |
MS.gene074335.t1 | MTR_7g112040 | 35.345 | 116 | 70 | 3 | 413 | 526 | 25 | 137 | 1.56e-14 | 75.9 |
MS.gene074335.t1 | MTR_5g084930 | 42.308 | 104 | 58 | 2 | 56 | 158 | 135 | 237 | 2.41e-17 | 85.1 |
MS.gene074335.t1 | MTR_5g084930 | 51.220 | 82 | 38 | 2 | 81 | 161 | 30 | 110 | 1.46e-16 | 82.8 |
MS.gene074335.t1 | MTR_5g084930 | 27.670 | 206 | 131 | 6 | 318 | 515 | 64 | 259 | 7.98e-13 | 70.9 |
MS.gene074335.t1 | MTR_5g084930 | 31.206 | 141 | 92 | 2 | 420 | 560 | 36 | 171 | 1.06e-11 | 67.4 |
MS.gene074335.t1 | MTR_2g021750 | 47.561 | 82 | 41 | 2 | 81 | 161 | 30 | 110 | 2.94e-13 | 71.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene074335.t1 | AT5G60640 | 68.919 | 518 | 144 | 4 | 59 | 560 | 81 | 597 | 0.0 | 738 |
MS.gene074335.t1 | AT3G54960 | 60.105 | 569 | 200 | 8 | 12 | 560 | 18 | 579 | 0.0 | 676 |
MS.gene074335.t1 | AT5G60640 | 70.067 | 451 | 128 | 2 | 59 | 502 | 81 | 531 | 0.0 | 669 |
MS.gene074335.t1 | AT3G54960 | 59.388 | 490 | 178 | 5 | 12 | 481 | 18 | 506 | 0.0 | 590 |
MS.gene074335.t1 | AT5G60640 | 53.282 | 518 | 161 | 9 | 59 | 560 | 81 | 533 | 5.89e-175 | 505 |
MS.gene074335.t1 | AT3G16110 | 34.404 | 436 | 277 | 4 | 78 | 505 | 74 | 508 | 1.69e-90 | 288 |
MS.gene074335.t1 | AT1G52260 | 32.554 | 513 | 316 | 9 | 3 | 505 | 18 | 510 | 7.26e-89 | 284 |
MS.gene074335.t1 | AT1G21750 | 39.103 | 468 | 244 | 20 | 81 | 521 | 32 | 485 | 7.74e-82 | 264 |
MS.gene074335.t1 | AT1G21750 | 38.745 | 462 | 247 | 18 | 81 | 519 | 32 | 480 | 8.58e-81 | 262 |
MS.gene074335.t1 | AT1G77510 | 35.830 | 494 | 273 | 19 | 81 | 548 | 31 | 506 | 9.20e-75 | 246 |
MS.gene074335.t1 | AT1G77510 | 46.512 | 86 | 45 | 1 | 73 | 157 | 367 | 452 | 5.62e-14 | 75.1 |
MS.gene074335.t1 | AT2G47470 | 34.054 | 185 | 109 | 5 | 315 | 497 | 55 | 228 | 6.33e-21 | 93.2 |
MS.gene074335.t1 | AT2G47470 | 30.303 | 231 | 114 | 9 | 84 | 279 | 28 | 246 | 4.54e-18 | 84.7 |
MS.gene074335.t1 | AT2G47470 | 33.333 | 111 | 67 | 3 | 427 | 535 | 37 | 142 | 3.96e-13 | 70.1 |
MS.gene074335.t1 | AT2G47470 | 34.054 | 185 | 109 | 5 | 315 | 497 | 55 | 228 | 1.04e-20 | 94.0 |
MS.gene074335.t1 | AT2G47470 | 30.303 | 231 | 114 | 9 | 84 | 279 | 28 | 246 | 1.28e-17 | 84.7 |
MS.gene074335.t1 | AT2G47470 | 34.579 | 107 | 63 | 3 | 431 | 535 | 41 | 142 | 5.38e-13 | 70.9 |
MS.gene074335.t1 | AT2G47470 | 34.054 | 185 | 109 | 5 | 315 | 497 | 55 | 228 | 1.11e-20 | 94.0 |
MS.gene074335.t1 | AT2G47470 | 30.303 | 231 | 114 | 9 | 84 | 279 | 28 | 246 | 1.38e-17 | 84.7 |
MS.gene074335.t1 | AT2G47470 | 34.579 | 107 | 63 | 3 | 431 | 535 | 41 | 142 | 4.11e-13 | 71.2 |
MS.gene074335.t1 | AT2G47470 | 34.054 | 185 | 109 | 5 | 315 | 497 | 55 | 228 | 1.47e-20 | 94.0 |
MS.gene074335.t1 | AT2G47470 | 30.303 | 231 | 114 | 9 | 84 | 279 | 28 | 246 | 1.96e-17 | 84.7 |
MS.gene074335.t1 | AT2G47470 | 35.714 | 98 | 59 | 2 | 431 | 526 | 41 | 136 | 4.92e-13 | 71.2 |
MS.gene074335.t1 | AT1G04980 | 47.561 | 82 | 41 | 2 | 81 | 161 | 34 | 114 | 3.33e-16 | 81.6 |
MS.gene074335.t1 | AT1G04980 | 47.436 | 78 | 39 | 2 | 82 | 158 | 170 | 246 | 4.59e-16 | 81.3 |
MS.gene074335.t1 | AT1G04980 | 27.700 | 213 | 133 | 6 | 315 | 515 | 65 | 268 | 7.29e-15 | 77.4 |
MS.gene074335.t1 | AT2G32920 | 48.718 | 78 | 38 | 2 | 82 | 158 | 165 | 241 | 4.51e-16 | 81.3 |
MS.gene074335.t1 | AT2G32920 | 47.561 | 82 | 41 | 2 | 81 | 161 | 32 | 112 | 8.44e-16 | 80.5 |
MS.gene074335.t1 | AT2G32920 | 27.670 | 206 | 133 | 5 | 318 | 515 | 66 | 263 | 1.24e-13 | 73.6 |
MS.gene074335.t1 | AT1G35620 | 27.928 | 222 | 133 | 8 | 81 | 286 | 34 | 244 | 1.16e-15 | 80.1 |
Find 121 sgRNAs with CRISPR-Local
Find 224 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ATCAAATAGCTTACACTTTC+AGG | 0.073604 | 2.2:-7056548 | None:intergenic |
TAGGAGTTGAGGCTGGTTTC+TGG | 0.153170 | 2.2:-7057358 | None:intergenic |
GTTGCAGCGGCGGCGTATTC+TGG | 0.198292 | 2.2:-7053963 | None:intergenic |
GAAATTGCTCCCAGTATTTC+AGG | 0.203282 | 2.2:+7055642 | MS.gene074335:CDS |
GAAGAAAAGCTCAACCATTT+TGG | 0.206003 | 2.2:+7055262 | MS.gene074335:CDS |
ACATCAGAGCTCTCTGATTT+AGG | 0.211013 | 2.2:-7057377 | None:intergenic |
TTCTGAGACCAAAGTTGTTT+TGG | 0.212145 | 2.2:+7054325 | MS.gene074335:CDS |
TGCTCAGAAATTTGATGTTC+AGG | 0.255407 | 2.2:+7054046 | MS.gene074335:CDS |
TAGCTTACACTTTCAGGAAT+TGG | 0.267348 | 2.2:-7056542 | None:intergenic |
ATAATTACCTGTTTCTTGAT+TGG | 0.283200 | 2.2:-7055479 | None:intergenic |
TTGAAAAGCTTTGCAACTTC+AGG | 0.285270 | 2.2:-7055190 | None:intergenic |
GTTGCTACTTTGGTTCTCTT+TGG | 0.289499 | 2.2:-7057417 | None:intergenic |
TTTGATGCTTCCTGAAATAC+TGG | 0.295344 | 2.2:-7055652 | None:intergenic |
TATACATAACATTACTTCAT+TGG | 0.319759 | 2.2:+7054280 | MS.gene074335:CDS |
GTGGTGGTTTCACCAGCTTC+TGG | 0.328568 | 2.2:-7053729 | None:intergenic |
AGAAATTAAACAAACCAAAA+TGG | 0.339530 | 2.2:-7055276 | None:intergenic |
CTGCTTGAGGAACTTGTAAA+AGG | 0.346354 | 2.2:-7057312 | None:intergenic |
AGCTTACACTTTCAGGAATT+GGG | 0.357347 | 2.2:-7056541 | None:intergenic |
GCTGGTTTCTGGAGCTTGAA+TGG | 0.364344 | 2.2:-7057347 | None:intergenic |
GGTGACTATTGACAGAATTA+AGG | 0.380026 | 2.2:+7056328 | MS.gene074335:CDS |
CTGGTTTCTGGAGCTTGAAT+GGG | 0.380359 | 2.2:-7057346 | None:intergenic |
CTCCTCCAACAAGATTCCTT+TGG | 0.388801 | 2.2:+7055412 | MS.gene074335:CDS |
AAGGATCAACGCAGGGCGTT+TGG | 0.389545 | 2.2:-7055227 | None:intergenic |
TGACATTGCTGTTGCTACTT+TGG | 0.390524 | 2.2:-7057427 | None:intergenic |
TGAAAATCCAATCAAGAAAC+AGG | 0.402093 | 2.2:+7055472 | MS.gene074335:CDS |
TTTGCAAGCTTGTTGTATAT+CGG | 0.417814 | 2.2:-7056853 | None:intergenic |
CGCCGCTGCAACGGAATTGA+AGG | 0.419026 | 2.2:+7053974 | MS.gene074335:CDS |
AGTTTCTGAATCTTCGTAAC+CGG | 0.422776 | 2.2:-7053805 | None:intergenic |
ATTTGGGTTTACCTTTGCCC+TGG | 0.431662 | 2.2:-7056938 | None:intergenic |
ATACCGAAGTAATCTGAAAC+AGG | 0.440539 | 2.2:-7056109 | None:intergenic |
GGAGAGAATGGGAGAGAAGG+TGG | 0.441946 | 2.2:-7053664 | None:intergenic |
GTGTGGCCATTGCCAACATT+TGG | 0.443950 | 2.2:+7056828 | MS.gene074335:CDS |
TCAGATTACTTCGGTATTAG+TGG | 0.447352 | 2.2:+7056115 | MS.gene074335:CDS |
TGTTACCAAAGGAATCTTGT+TGG | 0.449876 | 2.2:-7055417 | None:intergenic |
GAGAAAACCCAAAACAACTT+TGG | 0.451359 | 2.2:-7054333 | None:intergenic |
CAACTTCAGGATCCACAGTC+TGG | 0.454592 | 2.2:-7055177 | None:intergenic |
GGAAGAAAATTTGTGTTTGA+AGG | 0.454888 | 2.2:+7056302 | MS.gene074335:CDS |
GCAGCTAGCTCCTCACTCTC+AGG | 0.456501 | 2.2:-7055121 | None:intergenic |
TCAATGAAGAAAAGAATAGT+AGG | 0.456548 | 2.2:-7054074 | None:intergenic |
AGAAGGTGGAGAAGAAGAGA+AGG | 0.463950 | 2.2:-7053650 | None:intergenic |
GCTCAGAAATTTGATGTTCA+GGG | 0.464833 | 2.2:+7054047 | MS.gene074335:CDS |
AGAGAAGGGTAGTGAGGGAA+AGG | 0.466754 | 2.2:-7053635 | None:intergenic |
GGAAGCATCAAAGTCTTTCA+AGG | 0.466842 | 2.2:+7055663 | MS.gene074335:CDS |
TTCGTCATCGAGTTCGTTTG+AGG | 0.471369 | 2.2:-7053685 | None:intergenic |
GTGGTGGTGGTGTGTGGTGG+TGG | 0.471773 | 2.2:-7053745 | None:intergenic |
GAGTTCGTTTGAGGAGAGAA+TGG | 0.472106 | 2.2:-7053676 | None:intergenic |
TGTATATCGGTTCCAAATGT+TGG | 0.475373 | 2.2:-7056840 | None:intergenic |
CGGATTCATCGCCGTGGTGG+TGG | 0.476188 | 2.2:-7053758 | None:intergenic |
ATGTTCACTTTGCAGTCTGA+TGG | 0.480322 | 2.2:+7057064 | MS.gene074335:intron |
AAAATTTGTGTTTGAAGGAG+AGG | 0.487863 | 2.2:+7056307 | MS.gene074335:CDS |
ACTCTTCTCTTCTTCCCAGC+AGG | 0.489317 | 2.2:+7057094 | MS.gene074335:CDS |
AGAAGAAGAGAAGGGTAGTG+AGG | 0.489549 | 2.2:-7053641 | None:intergenic |
TTTGGGTTTACCTTTGCCCT+GGG | 0.490545 | 2.2:-7056937 | None:intergenic |
GTCTTCTTCGAGATCGGCGT+CGG | 0.493538 | 2.2:-7053778 | None:intergenic |
CTTCAATTCCGTTGCAGCGG+CGG | 0.499831 | 2.2:-7053973 | None:intergenic |
TGAGGAGAGAATGGGAGAGA+AGG | 0.499866 | 2.2:-7053667 | None:intergenic |
CTCTCTTGTAATAGCCAAGA+TGG | 0.503883 | 2.2:+7056894 | MS.gene074335:CDS |
TTTCTTCCTCTTTCTTGACA+AGG | 0.508368 | 2.2:-7055246 | None:intergenic |
GAAGAAGAGAAGGGTAGTGA+GGG | 0.508802 | 2.2:-7053640 | None:intergenic |
TCTGATTTAGGAGTTGAGGC+TGG | 0.514207 | 2.2:-7057365 | None:intergenic |
CAGATTACTTCGGTATTAGT+GGG | 0.514292 | 2.2:+7056116 | MS.gene074335:CDS |
GAACACAAAATGAGCATCCC+AGG | 0.515907 | 2.2:+7056920 | MS.gene074335:CDS |
ATCAAAGTCTTTCAAGGGAA+AGG | 0.517288 | 2.2:+7055669 | MS.gene074335:CDS |
GGTGATGTGAAAATAGTTGT+TGG | 0.517934 | 2.2:+7056647 | MS.gene074335:CDS |
ACCACCACACACCACCACCA+CGG | 0.523167 | 2.2:+7053747 | MS.gene074335:CDS |
AGAATTCGACTAAAACGAAT+CGG | 0.526308 | 2.2:-7053905 | None:intergenic |
AGTTCGTTTGAGGAGAGAAT+GGG | 0.532275 | 2.2:-7053675 | None:intergenic |
TTAACTCGGCGACAGAATGA+TGG | 0.534871 | 2.2:+7056626 | MS.gene074335:intron |
ACATGGATTAAGAAGAAGAC+TGG | 0.536124 | 2.2:+7054251 | MS.gene074335:CDS |
AATATCAGATATATGCTCCT+TGG | 0.540524 | 2.2:+7056806 | MS.gene074335:intron |
ATCAGAGAGCTCTGATGTCA+AGG | 0.545354 | 2.2:+7057382 | MS.gene074335:CDS |
GCATACACCGGAAACGATGA+TGG | 0.546485 | 2.2:+7056281 | MS.gene074335:CDS |
GCAGTTGATCTTTGTGCTTG+TGG | 0.546998 | 2.2:+7056060 | MS.gene074335:intron |
GAAGGTGGAGAAGAAGAGAA+GGG | 0.548464 | 2.2:-7053649 | None:intergenic |
TACCAAAGGAATCTTGTTGG+AGG | 0.552032 | 2.2:-7055414 | None:intergenic |
GAAACTGATAACGAAGATGT+TGG | 0.553749 | 2.2:+7056082 | MS.gene074335:CDS |
AGCAACTTCATTATCTTCAG+TGG | 0.558524 | 2.2:-7054027 | None:intergenic |
GCTGGGAAGAAGAGAAGAGT+GGG | 0.561355 | 2.2:-7057091 | None:intergenic |
AATTGTCTTGGATGAGTCAA+AGG | 0.563831 | 2.2:+7056685 | MS.gene074335:CDS |
AGAATACGCCGCCGCTGCAA+CGG | 0.564183 | 2.2:+7053965 | MS.gene074335:CDS |
GCCGTGGTGGTGGTGTGTGG+TGG | 0.565946 | 2.2:-7053748 | None:intergenic |
TTCCTCGACGAACCAGAAGC+TGG | 0.565959 | 2.2:+7053717 | MS.gene074335:CDS |
GGAGAAGTCTTCTTCGAGAT+CGG | 0.567305 | 2.2:-7053784 | None:intergenic |
GCTCTCTGATTTAGGAGTTG+AGG | 0.567708 | 2.2:-7057369 | None:intergenic |
AGCTGCGGCTTCACGTCTTG+AGG | 0.570216 | 2.2:+7055138 | MS.gene074335:CDS |
AAGCCTGTTTCAGATTACTT+CGG | 0.573742 | 2.2:+7056106 | MS.gene074335:CDS |
GTTGATCCTTGTCAAGAAAG+AGG | 0.574493 | 2.2:+7055240 | MS.gene074335:CDS |
GTGTGGTCATTGTCAAGCAT+TGG | 0.575427 | 2.2:+7053938 | MS.gene074335:CDS |
TTCTTGACAAGGATCAACGC+AGG | 0.576510 | 2.2:-7055235 | None:intergenic |
CAGATATATGCTCCTTGGTG+TGG | 0.578248 | 2.2:+7056811 | MS.gene074335:intron |
GATCTCGAAGAAGACTTCTC+CGG | 0.588882 | 2.2:+7053786 | MS.gene074335:CDS |
TCGGTTCCAAATGTTGGCAA+TGG | 0.589689 | 2.2:-7056834 | None:intergenic |
ACCCTTCAATTCCGTTGCAG+CGG | 0.589888 | 2.2:-7053976 | None:intergenic |
ATCGCCGTGGTGGTGGTGTG+TGG | 0.590102 | 2.2:-7053751 | None:intergenic |
CACCAGCTTCTGGTTCGTCG+AGG | 0.592591 | 2.2:-7053719 | None:intergenic |
GGATTGATGCATGCTGCTTG+AGG | 0.593443 | 2.2:-7057325 | None:intergenic |
GGTGTTCATAAGAGTTACAC+TGG | 0.600709 | 2.2:+7054098 | MS.gene074335:CDS |
AAATGAGCATCCCAGGGCAA+AGG | 0.601467 | 2.2:+7056927 | MS.gene074335:CDS |
GTCAAAGGACGTTCTCCTTG+AGG | 0.604589 | 2.2:+7056700 | MS.gene074335:CDS |
TATGTAGGGTCCTGAGAGTG+AGG | 0.607409 | 2.2:+7055111 | MS.gene074335:intron |
ATTAAGAAGAAGACTGGACC+TGG | 0.609346 | 2.2:+7054257 | MS.gene074335:CDS |
GAAGTAATGTTATGTATACC+AGG | 0.613032 | 2.2:-7054275 | None:intergenic |
GAAGCATCAAAGTCTTTCAA+GGG | 0.619244 | 2.2:+7055664 | MS.gene074335:CDS |
AAGTAGCAACAGCAATGTCA+AGG | 0.621637 | 2.2:+7057430 | MS.gene074335:CDS |
TGCTGGGAAGAAGAGAAGAG+TGG | 0.622841 | 2.2:-7057092 | None:intergenic |
GAATTCTACGCACCGTGGTG+TGG | 0.628094 | 2.2:+7053921 | MS.gene074335:CDS |
CAAGAGAGTCAATACTGCGA+AGG | 0.629198 | 2.2:-7056879 | None:intergenic |
GCCGCTGCAACGGAATTGAA+GGG | 0.629374 | 2.2:+7053975 | MS.gene074335:CDS |
TCTTGACAAGGATCAACGCA+GGG | 0.634558 | 2.2:-7055234 | None:intergenic |
CTTGTAATAGCCAAGATGGA+CGG | 0.635238 | 2.2:+7056898 | MS.gene074335:CDS |
CGTCGGATTCATCGCCGTGG+TGG | 0.640530 | 2.2:-7053761 | None:intergenic |
TTGATGCTTCCTGAAATACT+GGG | 0.651591 | 2.2:-7055651 | None:intergenic |
TAGTCGAATTCTACGCACCG+TGG | 0.657199 | 2.2:+7053916 | MS.gene074335:CDS |
AACACAAAATGAGCATCCCA+GGG | 0.664470 | 2.2:+7056921 | MS.gene074335:CDS |
TGTTGGCAATGGCCACACCA+AGG | 0.684405 | 2.2:-7056823 | None:intergenic |
GCAGAGAAGCTATTGTGACA+TGG | 0.687793 | 2.2:+7054234 | MS.gene074335:intron |
CGGCGTCGGATTCATCGCCG+TGG | 0.689108 | 2.2:-7053764 | None:intergenic |
TGAGAGTGAGGAGCTAGCTG+CGG | 0.699295 | 2.2:+7055123 | MS.gene074335:CDS |
ATGCAGGTACTTGCATACAC+CGG | 0.700002 | 2.2:+7056269 | MS.gene074335:intron |
CTGGGAAGAAGAGAAGAGTG+GGG | 0.702683 | 2.2:-7057090 | None:intergenic |
GCTTGACAATGACCACACCA+CGG | 0.724229 | 2.2:-7053933 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AATGAGATTATATTATAATA+AGG | - | chr2.2:7055517-7055536 | None:intergenic | 10.0% |
!! | TTATTATAATATAATCTCAT+TGG | + | chr2.2:7055516-7055535 | MS.gene074335:intron | 10.0% |
!!! | GAAAAATAAATAATTACTTT+TGG | - | chr2.2:7056148-7056167 | None:intergenic | 10.0% |
!!! | GAAATTTTATTCAATTTTAT+TGG | + | chr2.2:7054173-7054192 | MS.gene074335:intron | 10.0% |
!! | ATCTTGTATTGTTAATTTAA+TGG | + | chr2.2:7056776-7056795 | MS.gene074335:intron | 15.0% |
!! | AAATATAACTGGTAAAATAG+AGG | - | chr2.2:7056738-7056757 | None:intergenic | 20.0% |
!! | AAGATTGATCAATAAGTTAT+TGG | - | chr2.2:7057038-7057057 | None:intergenic | 20.0% |
!! | AATATAACTGGTAAAATAGA+GGG | - | chr2.2:7056737-7056756 | None:intergenic | 20.0% |
!! | AGAAATTAAACAAACCAAAA+TGG | - | chr2.2:7055279-7055298 | None:intergenic | 20.0% |
!! | AGTTAACAAAACATAATTGA+TGG | - | chr2.2:7056581-7056600 | None:intergenic | 20.0% |
!! | TATACATAACATTACTTCAT+TGG | + | chr2.2:7054280-7054299 | MS.gene074335:CDS | 20.0% |
!! | TGTATTGTTAATTTAATGGT+TGG | + | chr2.2:7056780-7056799 | MS.gene074335:intron | 20.0% |
!!! | ATTACATCTTTTGAATAACT+TGG | + | chr2.2:7056215-7056234 | MS.gene074335:intron | 20.0% |
!!! | TCAATTATGTTTTGTTAACT+TGG | + | chr2.2:7056581-7056600 | MS.gene074335:intron | 20.0% |
! | AAAGTGTAAGCTATTTGATT+TGG | + | chr2.2:7056552-7056571 | MS.gene074335:intron | 25.0% |
! | AAGGAAGAAAGTTTAATCTT+TGG | + | chr2.2:7054812-7054831 | MS.gene074335:intron | 25.0% |
! | ATTAGAGATGCAAATATAAC+TGG | - | chr2.2:7056749-7056768 | None:intergenic | 25.0% |
! | ATTAGCAAATCATAACGAAT+AGG | - | chr2.2:7054926-7054945 | None:intergenic | 25.0% |
! | ATTGCTTAATATTCACTTAC+AGG | - | chr2.2:7057136-7057155 | None:intergenic | 25.0% |
! | ATTGTTAATTTAATGGTTGG+TGG | + | chr2.2:7056783-7056802 | MS.gene074335:intron | 25.0% |
! | CCTCATTAAATGAAAGAAAA+AGG | - | chr2.2:7056420-7056439 | None:intergenic | 25.0% |
! | GTATCATCAAATTGAACAAA+GGG | - | chr2.2:7056170-7056189 | None:intergenic | 25.0% |
! | TCAATGAAGAAAAGAATAGT+AGG | - | chr2.2:7054077-7054096 | None:intergenic | 25.0% |
!! | ACTATTCTTTTCTTCATTGA+TGG | + | chr2.2:7054077-7054096 | MS.gene074335:CDS | 25.0% |
!! | ATAATTACCTGTTTCTTGAT+TGG | - | chr2.2:7055482-7055501 | None:intergenic | 25.0% |
!! | ATTGGATTTTCAAAGATTGT+TGG | - | chr2.2:7055464-7055483 | None:intergenic | 25.0% |
!! | CCTTTTTCTTTCATTTAATG+AGG | + | chr2.2:7056417-7056436 | MS.gene074335:intron | 25.0% |
!! | TCAAATCTTCATTTTATCTC+AGG | + | chr2.2:7056466-7056485 | MS.gene074335:intron | 25.0% |
!!! | AATTTGTTTTTCGATGAAGT+TGG | + | chr2.2:7054999-7055018 | MS.gene074335:intron | 25.0% |
!!! | ACTTTCATCTTGTCATTTTT+TGG | + | chr2.2:7055720-7055739 | MS.gene074335:intron | 25.0% |
!!! | ATGTTTGAAACTTCTTTTTC+AGG | + | chr2.2:7055588-7055607 | MS.gene074335:intron | 25.0% |
!!! | CAATTTTGATGAAATTGTCT+TGG | + | chr2.2:7056673-7056692 | MS.gene074335:CDS | 25.0% |
!!! | CTTTCATCTTGTCATTTTTT+GGG | + | chr2.2:7055721-7055740 | MS.gene074335:intron | 25.0% |
!!! | GGTTATATGTTGATTTTAAG+TGG | + | chr2.2:7054684-7054703 | MS.gene074335:intron | 25.0% |
AAAATTTGTGTTTGAAGGAG+AGG | + | chr2.2:7056307-7056326 | MS.gene074335:CDS | 30.0% | |
AAGTTATATGCTATGAAGCA+CGG | + | chr2.2:7054513-7054532 | MS.gene074335:intron | 30.0% | |
AATATCAGATATATGCTCCT+TGG | + | chr2.2:7056806-7056825 | MS.gene074335:intron | 30.0% | |
AGAATTCGACTAAAACGAAT+CGG | - | chr2.2:7053908-7053927 | None:intergenic | 30.0% | |
ATCAAATAGCTTACACTTTC+AGG | - | chr2.2:7056551-7056570 | None:intergenic | 30.0% | |
ATCAATAAGTTATTGGATGC+AGG | - | chr2.2:7057031-7057050 | None:intergenic | 30.0% | |
ATCATACACATTCTGTAACA+TGG | - | chr2.2:7056395-7056414 | None:intergenic | 30.0% | |
CGCATACAAATTTAAACCTT+CGG | + | chr2.2:7054860-7054879 | MS.gene074335:intron | 30.0% | |
CGTATCATCAAATTGAACAA+AGG | - | chr2.2:7056171-7056190 | None:intergenic | 30.0% | |
CTTGTAAAAACTGTTACCAA+AGG | - | chr2.2:7055431-7055450 | None:intergenic | 30.0% | |
GAAAGTTTAATCTTTGGACT+TGG | + | chr2.2:7054818-7054837 | MS.gene074335:intron | 30.0% | |
GAAGTAATGTTATGTATACC+AGG | - | chr2.2:7054278-7054297 | None:intergenic | 30.0% | |
GAATGTAGTTAAATGTGTCT+TGG | + | chr2.2:7054588-7054607 | MS.gene074335:intron | 30.0% | |
GGAAGAAAATTTGTGTTTGA+AGG | + | chr2.2:7056302-7056321 | MS.gene074335:CDS | 30.0% | |
TGAAAATCCAATCAAGAAAC+AGG | + | chr2.2:7055472-7055491 | MS.gene074335:CDS | 30.0% | |
! | AGCAATGTCTAGTTTGAATT+TGG | - | chr2.2:7056958-7056977 | None:intergenic | 30.0% |
! | GCAATGTCTAGTTTGAATTT+GGG | - | chr2.2:7056957-7056976 | None:intergenic | 30.0% |
! | GTCTAACATGTTTGTTAACT+CGG | + | chr2.2:7056612-7056631 | MS.gene074335:intron | 30.0% |
! | TATCGAATTTTCCATCTGTA+GGG | - | chr2.2:7055370-7055389 | None:intergenic | 30.0% |
! | TCATTTTATCTCAGGCATTT+GGG | + | chr2.2:7056474-7056493 | MS.gene074335:intron | 30.0% |
! | TTATCGAATTTTCCATCTGT+AGG | - | chr2.2:7055371-7055390 | None:intergenic | 30.0% |
! | TTCATTTTATCTCAGGCATT+TGG | + | chr2.2:7056473-7056492 | MS.gene074335:intron | 30.0% |
!! | ATTCGTAGATGGATTATCTA+TGG | - | chr2.2:7054760-7054779 | None:intergenic | 30.0% |
!! | TTTGCAAGCTTGTTGTATAT+CGG | - | chr2.2:7056856-7056875 | None:intergenic | 30.0% |
AAGCCTGTTTCAGATTACTT+CGG | + | chr2.2:7056106-7056125 | MS.gene074335:CDS | 35.0% | |
AATTGTCTTGGATGAGTCAA+AGG | + | chr2.2:7056685-7056704 | MS.gene074335:CDS | 35.0% | |
AGCAAAACTAACAGAGTCTA+AGG | - | chr2.2:7056371-7056390 | None:intergenic | 35.0% | |
AGCAACTTCATTATCTTCAG+TGG | - | chr2.2:7054030-7054049 | None:intergenic | 35.0% | |
AGCTTACACTTTCAGGAATT+GGG | - | chr2.2:7056544-7056563 | None:intergenic | 35.0% | |
AGTTTAATCTTTGGACTTGG+CGG | + | chr2.2:7054821-7054840 | MS.gene074335:intron | 35.0% | |
AGTTTCTGAATCTTCGTAAC+CGG | - | chr2.2:7053808-7053827 | None:intergenic | 35.0% | |
ATCAAAGTCTTTCAAGGGAA+AGG | + | chr2.2:7055669-7055688 | MS.gene074335:CDS | 35.0% | |
CAAAAACATAAGCACCCTTT+AGG | - | chr2.2:7056005-7056024 | None:intergenic | 35.0% | |
CAGATTACTTCGGTATTAGT+GGG | + | chr2.2:7056116-7056135 | MS.gene074335:CDS | 35.0% | |
CCTGTTATGCACAATATGTA+GGG | + | chr2.2:7055097-7055116 | MS.gene074335:intron | 35.0% | |
CTCATGTATAAACAGAAGCA+TGG | - | chr2.2:7055863-7055882 | None:intergenic | 35.0% | |
GAGAAAACCCAAAACAACTT+TGG | - | chr2.2:7054336-7054355 | None:intergenic | 35.0% | |
GCTCAGAAATTTGATGTTCA+GGG | + | chr2.2:7054047-7054066 | MS.gene074335:CDS | 35.0% | |
GGTGACTATTGACAGAATTA+AGG | + | chr2.2:7056328-7056347 | MS.gene074335:CDS | 35.0% | |
GGTGATGTGAAAATAGTTGT+TGG | + | chr2.2:7056647-7056666 | MS.gene074335:CDS | 35.0% | |
GTATTCTTGGAATTCGTAGA+TGG | - | chr2.2:7054771-7054790 | None:intergenic | 35.0% | |
TAGCTTACACTTTCAGGAAT+TGG | - | chr2.2:7056545-7056564 | None:intergenic | 35.0% | |
TCAGATTACTTCGGTATTAG+TGG | + | chr2.2:7056115-7056134 | MS.gene074335:CDS | 35.0% | |
TCCTGTTATGCACAATATGT+AGG | + | chr2.2:7055096-7055115 | MS.gene074335:intron | 35.0% | |
TCGATGAAGTTGGCAATTAA+AGG | + | chr2.2:7055009-7055028 | MS.gene074335:intron | 35.0% | |
TGCTCAGAAATTTGATGTTC+AGG | + | chr2.2:7054046-7054065 | MS.gene074335:CDS | 35.0% | |
TGTTACCAAAGGAATCTTGT+TGG | - | chr2.2:7055420-7055439 | None:intergenic | 35.0% | |
TTGAAAAGCTTTGCAACTTC+AGG | - | chr2.2:7055193-7055212 | None:intergenic | 35.0% | |
TTGATGCTTCCTGAAATACT+GGG | - | chr2.2:7055654-7055673 | None:intergenic | 35.0% | |
TTTCTTCCTCTTTCTTGACA+AGG | - | chr2.2:7055249-7055268 | None:intergenic | 35.0% | |
TTTGATGCTTCCTGAAATAC+TGG | - | chr2.2:7055655-7055674 | None:intergenic | 35.0% | |
! | ACATGGATTAAGAAGAAGAC+TGG | + | chr2.2:7054251-7054270 | MS.gene074335:CDS | 35.0% |
! | ACGTGTCATGGTGTTAATTA+AGG | + | chr2.2:7054793-7054812 | MS.gene074335:intron | 35.0% |
! | ATACCGAAGTAATCTGAAAC+AGG | - | chr2.2:7056112-7056131 | None:intergenic | 35.0% |
! | ATTGGGTCTGACTTGAAAAA+AGG | - | chr2.2:7056527-7056546 | None:intergenic | 35.0% |
! | CATTTTATCTCAGGCATTTG+GGG | + | chr2.2:7056475-7056494 | MS.gene074335:intron | 35.0% |
! | GAAACTGATAACGAAGATGT+TGG | + | chr2.2:7056082-7056101 | MS.gene074335:CDS | 35.0% |
! | GAAGAAAAGCTCAACCATTT+TGG | + | chr2.2:7055262-7055281 | MS.gene074335:CDS | 35.0% |
! | GAAGCATCAAAGTCTTTCAA+GGG | + | chr2.2:7055664-7055683 | MS.gene074335:CDS | 35.0% |
! | TGTCAATTTTTACCAGACTG+TGG | + | chr2.2:7055165-7055184 | MS.gene074335:CDS | 35.0% |
! | TTTTCTTCCATCATCGTTTC+CGG | - | chr2.2:7056291-7056310 | None:intergenic | 35.0% |
!! | AGAAGTGTAGCTTTGTTTCT+TGG | + | chr2.2:7054485-7054504 | MS.gene074335:intron | 35.0% |
!! | CAAAACTTTTGTTTCCTGCT+GGG | - | chr2.2:7057111-7057130 | None:intergenic | 35.0% |
!! | TCAAAACTTTTGTTTCCTGC+TGG | - | chr2.2:7057112-7057131 | None:intergenic | 35.0% |
!! | TCTGAGACCAAAGTTGTTTT+GGG | + | chr2.2:7054326-7054345 | MS.gene074335:CDS | 35.0% |
!! | TGTATATCGGTTCCAAATGT+TGG | - | chr2.2:7056843-7056862 | None:intergenic | 35.0% |
!!! | AAGGTTTTAGCTTGTCTTCA+AGG | - | chr2.2:7056508-7056527 | None:intergenic | 35.0% |
!!! | TAAACCTTCGGTGTTTTCAT+GGG | + | chr2.2:7054872-7054891 | MS.gene074335:intron | 35.0% |
!!! | TTAAACCTTCGGTGTTTTCA+TGG | + | chr2.2:7054871-7054890 | MS.gene074335:intron | 35.0% |
!!! | TTCTGAGACCAAAGTTGTTT+TGG | + | chr2.2:7054325-7054344 | MS.gene074335:CDS | 35.0% |
AAACATAAGCACCCTTTAGG+AGG | - | chr2.2:7056002-7056021 | None:intergenic | 40.0% | |
AACACAAAATGAGCATCCCA+GGG | + | chr2.2:7056921-7056940 | MS.gene074335:CDS | 40.0% | |
AAGTAGCAACAGCAATGTCA+AGG | + | chr2.2:7057430-7057449 | MS.gene074335:CDS | 40.0% | |
ACATCAGAGCTCTCTGATTT+AGG | - | chr2.2:7057380-7057399 | None:intergenic | 40.0% | |
ACCAGTTGAATTTCCAATGC+AGG | + | chr2.2:7056253-7056272 | MS.gene074335:intron | 40.0% | |
ACCTGCATTGGAAATTCAAC+TGG | - | chr2.2:7056257-7056276 | None:intergenic | 40.0% | |
AGCACAAAGATCAACTGCAA+TGG | - | chr2.2:7056058-7056077 | None:intergenic | 40.0% | |
AGGTGTAGTGTACTTCTTAG+TGG | + | chr2.2:7055811-7055830 | MS.gene074335:intron | 40.0% | |
AGTTCGTTTGAGGAGAGAAT+GGG | - | chr2.2:7053678-7053697 | None:intergenic | 40.0% | |
ATGTTCACTTTGCAGTCTGA+TGG | + | chr2.2:7057064-7057083 | MS.gene074335:intron | 40.0% | |
ATTAAGAAGAAGACTGGACC+TGG | + | chr2.2:7054257-7054276 | MS.gene074335:CDS | 40.0% | |
CCAAGAATACTAACGTGTCA+TGG | + | chr2.2:7054781-7054800 | MS.gene074335:intron | 40.0% | |
CCATGACACGTTAGTATTCT+TGG | - | chr2.2:7054784-7054803 | None:intergenic | 40.0% | |
CCCTACATATTGTGCATAAC+AGG | - | chr2.2:7055100-7055119 | None:intergenic | 40.0% | |
CTCTCTTGTAATAGCCAAGA+TGG | + | chr2.2:7056894-7056913 | MS.gene074335:CDS | 40.0% | |
CTGAATTCTTGTCGAAAGCA+AGG | - | chr2.2:7055793-7055812 | None:intergenic | 40.0% | |
CTGCTTGAGGAACTTGTAAA+AGG | - | chr2.2:7057315-7057334 | None:intergenic | 40.0% | |
CTTGCTTTCGACAAGAATTC+AGG | + | chr2.2:7055791-7055810 | MS.gene074335:intron | 40.0% | |
CTTGTAATAGCCAAGATGGA+CGG | + | chr2.2:7056898-7056917 | MS.gene074335:CDS | 40.0% | |
GAAATTGCTCCCAGTATTTC+AGG | + | chr2.2:7055642-7055661 | MS.gene074335:CDS | 40.0% | |
GGTGTAGTGTACTTCTTAGT+GGG | + | chr2.2:7055812-7055831 | MS.gene074335:intron | 40.0% | |
GGTGTTCATAAGAGTTACAC+TGG | + | chr2.2:7054098-7054117 | MS.gene074335:CDS | 40.0% | |
GTTGATCCTTGTCAAGAAAG+AGG | + | chr2.2:7055240-7055259 | MS.gene074335:CDS | 40.0% | |
TACCAAAGGAATCTTGTTGG+AGG | - | chr2.2:7055417-7055436 | None:intergenic | 40.0% | |
! | AACTAACAGAGTCTAAGGCA+AGG | - | chr2.2:7056366-7056385 | None:intergenic | 40.0% |
! | ACTAACAGAGTCTAAGGCAA+GGG | - | chr2.2:7056365-7056384 | None:intergenic | 40.0% |
! | ATTTTCCATCTGTAGGGACA+CGG | - | chr2.2:7055364-7055383 | None:intergenic | 40.0% |
! | ATTTTGTGTTCCGTCCATCT+TGG | - | chr2.2:7056911-7056930 | None:intergenic | 40.0% |
! | TGACATTGCTGTTGCTACTT+TGG | - | chr2.2:7057430-7057449 | None:intergenic | 40.0% |
!! | ACGTCTTTTTCGTCGAATTC+AGG | - | chr2.2:7053840-7053859 | None:intergenic | 40.0% |
!! | CGTCTTTTTCGTCGAATTCA+GGG | - | chr2.2:7053839-7053858 | None:intergenic | 40.0% |
!! | GGAAGCATCAAAGTCTTTCA+AGG | + | chr2.2:7055663-7055682 | MS.gene074335:CDS | 40.0% |
!! | GTCTTTTTCGTCGAATTCAG+GGG | - | chr2.2:7053838-7053857 | None:intergenic | 40.0% |
!! | GTTGCTACTTTGGTTCTCTT+TGG | - | chr2.2:7057420-7057439 | None:intergenic | 40.0% |
!! | TCTTTTTCGTCGAATTCAGG+GGG | - | chr2.2:7053837-7053856 | None:intergenic | 40.0% |
AGAAGAAGAGAAGGGTAGTG+AGG | - | chr2.2:7053644-7053663 | None:intergenic | 45.0% | |
AGAAGGTGGAGAAGAAGAGA+AGG | - | chr2.2:7053653-7053672 | None:intergenic | 45.0% | |
AGGGTCAAAGTTGTACCTCA+AGG | - | chr2.2:7056718-7056737 | None:intergenic | 45.0% | |
ATCCAGCTCTTCCTCCTAAA+GGG | + | chr2.2:7055988-7056007 | MS.gene074335:intron | 45.0% | |
ATGCAGGTACTTGCATACAC+CGG | + | chr2.2:7056269-7056288 | MS.gene074335:intron | 45.0% | |
CAAGAGAGTCAATACTGCGA+AGG | - | chr2.2:7056882-7056901 | None:intergenic | 45.0% | |
CAGATATATGCTCCTTGGTG+TGG | + | chr2.2:7056811-7056830 | MS.gene074335:intron | 45.0% | |
CTCCTCCAACAAGATTCCTT+TGG | + | chr2.2:7055412-7055431 | MS.gene074335:CDS | 45.0% | |
GAACACAAAATGAGCATCCC+AGG | + | chr2.2:7056920-7056939 | MS.gene074335:CDS | 45.0% | |
GAAGAAGAGAAGGGTAGTGA+GGG | - | chr2.2:7053643-7053662 | None:intergenic | 45.0% | |
GAAGGTGGAGAAGAAGAGAA+GGG | - | chr2.2:7053652-7053671 | None:intergenic | 45.0% | |
GAGTTCGTTTGAGGAGAGAA+TGG | - | chr2.2:7053679-7053698 | None:intergenic | 45.0% | |
GATCTCGAAGAAGACTTCTC+CGG | + | chr2.2:7053786-7053805 | MS.gene074335:CDS | 45.0% | |
GCAGAGAAGCTATTGTGACA+TGG | + | chr2.2:7054234-7054253 | MS.gene074335:intron | 45.0% | |
GCAGTTGATCTTTGTGCTTG+TGG | + | chr2.2:7056060-7056079 | MS.gene074335:intron | 45.0% | |
GCTCTCTGATTTAGGAGTTG+AGG | - | chr2.2:7057372-7057391 | None:intergenic | 45.0% | |
GGAGAAGTCTTCTTCGAGAT+CGG | - | chr2.2:7053787-7053806 | None:intergenic | 45.0% | |
GTGTATGCAAGTACCTGCAT+TGG | - | chr2.2:7056269-7056288 | None:intergenic | 45.0% | |
GTGTGGTCATTGTCAAGCAT+TGG | + | chr2.2:7053938-7053957 | MS.gene074335:CDS | 45.0% | |
TCAACCCATGAAAACACCGA+AGG | - | chr2.2:7054879-7054898 | None:intergenic | 45.0% | |
TCGGTTCCAAATGTTGGCAA+TGG | - | chr2.2:7056837-7056856 | None:intergenic | 45.0% | |
TCTGATTTAGGAGTTGAGGC+TGG | - | chr2.2:7057368-7057387 | None:intergenic | 45.0% | |
TCTTGACAAGGATCAACGCA+GGG | - | chr2.2:7055237-7055256 | None:intergenic | 45.0% | |
TTAACTCGGCGACAGAATGA+TGG | + | chr2.2:7056626-7056645 | MS.gene074335:intron | 45.0% | |
TTCGTCATCGAGTTCGTTTG+AGG | - | chr2.2:7053688-7053707 | None:intergenic | 45.0% | |
TTCTTGACAAGGATCAACGC+AGG | - | chr2.2:7055238-7055257 | None:intergenic | 45.0% | |
! | ACGCATTCGAACAGAAGTGT+CGG | + | chr2.2:7054652-7054671 | MS.gene074335:intron | 45.0% |
! | ATCAGAGAGCTCTGATGTCA+AGG | + | chr2.2:7057382-7057401 | MS.gene074335:CDS | 45.0% |
! | ATTTGGGTTTACCTTTGCCC+TGG | - | chr2.2:7056941-7056960 | None:intergenic | 45.0% |
! | TTCATGGGTTGACTCTTGTG+TGG | + | chr2.2:7054887-7054906 | MS.gene074335:intron | 45.0% |
! | TTTGGGTTTACCTTTGCCCT+GGG | - | chr2.2:7056940-7056959 | None:intergenic | 45.0% |
!! | CTGGTTTCTGGAGCTTGAAT+GGG | - | chr2.2:7057349-7057368 | None:intergenic | 45.0% |
AAATGAGCATCCCAGGGCAA+AGG | + | chr2.2:7056927-7056946 | MS.gene074335:CDS | 50.0% | |
ACCCTTCAATTCCGTTGCAG+CGG | - | chr2.2:7053979-7053998 | None:intergenic | 50.0% | |
ACTCTTCTCTTCTTCCCAGC+AGG | + | chr2.2:7057094-7057113 | MS.gene074335:CDS | 50.0% | |
AGAGAAGGGTAGTGAGGGAA+AGG | - | chr2.2:7053638-7053657 | None:intergenic | 50.0% | |
AGATCACTCTCGCACACACA+TGG | - | chr2.2:7057205-7057224 | None:intergenic | 50.0% | |
CAACTTCAGGATCCACAGTC+TGG | - | chr2.2:7055180-7055199 | None:intergenic | 50.0% | |
CTGGGAAGAAGAGAAGAGTG+GGG | - | chr2.2:7057093-7057112 | None:intergenic | 50.0% | |
GATCACTCTCGCACACACAT+GGG | - | chr2.2:7057204-7057223 | None:intergenic | 50.0% | |
GATCCAGCTCTTCCTCCTAA+AGG | + | chr2.2:7055987-7056006 | MS.gene074335:intron | 50.0% | |
GCATACACCGGAAACGATGA+TGG | + | chr2.2:7056281-7056300 | MS.gene074335:CDS | 50.0% | |
GCTGGGAAGAAGAGAAGAGT+GGG | - | chr2.2:7057094-7057113 | None:intergenic | 50.0% | |
GCTTGACAATGACCACACCA+CGG | - | chr2.2:7053936-7053955 | None:intergenic | 50.0% | |
GTCAAAGGACGTTCTCCTTG+AGG | + | chr2.2:7056700-7056719 | MS.gene074335:CDS | 50.0% | |
GTGCGAGAGTGATCTGCATA+TGG | + | chr2.2:7057210-7057229 | MS.gene074335:intron | 50.0% | |
GTGTGGCCATTGCCAACATT+TGG | + | chr2.2:7056828-7056847 | MS.gene074335:CDS | 50.0% | |
TAGTCGAATTCTACGCACCG+TGG | + | chr2.2:7053916-7053935 | MS.gene074335:CDS | 50.0% | |
TATGTAGGGTCCTGAGAGTG+AGG | + | chr2.2:7055111-7055130 | MS.gene074335:intron | 50.0% | |
TGAGGAGAGAATGGGAGAGA+AGG | - | chr2.2:7053670-7053689 | None:intergenic | 50.0% | |
TGCTGGGAAGAAGAGAAGAG+TGG | - | chr2.2:7057095-7057114 | None:intergenic | 50.0% | |
TGTCACTGTCGACACTGACA+CGG | - | chr2.2:7054622-7054641 | None:intergenic | 50.0% | |
TTTCGTCGAATTCAGGGGGT+TGG | - | chr2.2:7053833-7053852 | None:intergenic | 50.0% | |
TTTGGACTTGGCGGAATTCG+TGG | + | chr2.2:7054830-7054849 | MS.gene074335:intron | 50.0% | |
! | GGATTGATGCATGCTGCTTG+AGG | - | chr2.2:7057328-7057347 | None:intergenic | 50.0% |
! | GTGTCGACAGTGACACATGT+TGG | + | chr2.2:7054627-7054646 | MS.gene074335:intron | 50.0% |
!! | CAGAAGTGTCGGTGCTACAA+AGG | + | chr2.2:7054663-7054682 | MS.gene074335:intron | 50.0% |
!! | GCTGGTTTCTGGAGCTTGAA+TGG | - | chr2.2:7057350-7057369 | None:intergenic | 50.0% |
!! | TAGGAGTTGAGGCTGGTTTC+TGG | - | chr2.2:7057361-7057380 | None:intergenic | 50.0% |
CTTCAATTCCGTTGCAGCGG+CGG | - | chr2.2:7053976-7053995 | None:intergenic | 55.0% | |
GAATTCTACGCACCGTGGTG+TGG | + | chr2.2:7053921-7053940 | MS.gene074335:CDS | 55.0% | |
GACTTGGCGGAATTCGTGGT+TGG | + | chr2.2:7054834-7054853 | MS.gene074335:intron | 55.0% | |
GCCGCTGCAACGGAATTGAA+GGG | + | chr2.2:7053975-7053994 | MS.gene074335:CDS | 55.0% | |
GGAGAGAATGGGAGAGAAGG+TGG | - | chr2.2:7053667-7053686 | None:intergenic | 55.0% | |
GTCTTCTTCGAGATCGGCGT+CGG | - | chr2.2:7053781-7053800 | None:intergenic | 55.0% | |
GTGGTGGTTTCACCAGCTTC+TGG | - | chr2.2:7053732-7053751 | None:intergenic | 55.0% | |
GTTCACCGTGTCCCTACAGA+TGG | + | chr2.2:7055356-7055375 | MS.gene074335:intron | 55.0% | |
TGAGAGTGAGGAGCTAGCTG+CGG | + | chr2.2:7055123-7055142 | MS.gene074335:CDS | 55.0% | |
TGTTGGCAATGGCCACACCA+AGG | - | chr2.2:7056826-7056845 | None:intergenic | 55.0% | |
TTCCTCGACGAACCAGAAGC+TGG | + | chr2.2:7053717-7053736 | MS.gene074335:CDS | 55.0% | |
! | AAGGATCAACGCAGGGCGTT+TGG | - | chr2.2:7055230-7055249 | None:intergenic | 55.0% |
! | CACCCTTTAGGAGGAAGAGC+TGG | - | chr2.2:7055993-7056012 | None:intergenic | 55.0% |
ACCACCACACACCACCACCA+CGG | + | chr2.2:7053747-7053766 | MS.gene074335:CDS | 60.0% | |
AGAATACGCCGCCGCTGCAA+CGG | + | chr2.2:7053965-7053984 | MS.gene074335:CDS | 60.0% | |
AGCTGCGGCTTCACGTCTTG+AGG | + | chr2.2:7055138-7055157 | MS.gene074335:CDS | 60.0% | |
CGCCGCTGCAACGGAATTGA+AGG | + | chr2.2:7053974-7053993 | MS.gene074335:CDS | 60.0% | |
GCAGCTAGCTCCTCACTCTC+AGG | - | chr2.2:7055124-7055143 | None:intergenic | 60.0% | |
!! | CACCAGCTTCTGGTTCGTCG+AGG | - | chr2.2:7053722-7053741 | None:intergenic | 60.0% |
CGGATTCATCGCCGTGGTGG+TGG | - | chr2.2:7053761-7053780 | None:intergenic | 65.0% | |
CGTCGGATTCATCGCCGTGG+TGG | - | chr2.2:7053764-7053783 | None:intergenic | 65.0% | |
GTTGCAGCGGCGGCGTATTC+TGG | - | chr2.2:7053966-7053985 | None:intergenic | 65.0% | |
!! | ATCGCCGTGGTGGTGGTGTG+TGG | - | chr2.2:7053754-7053773 | None:intergenic | 65.0% |
!! | GTGGTGGTGGTGTGTGGTGG+TGG | - | chr2.2:7053748-7053767 | None:intergenic | 65.0% |
! | CGGCGTCGGATTCATCGCCG+TGG | - | chr2.2:7053767-7053786 | None:intergenic | 70.0% |
!! | GCCGTGGTGGTGGTGTGTGG+TGG | - | chr2.2:7053751-7053770 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.2 | gene | 7053618 | 7057463 | 7053618 | ID=MS.gene074335 |
chr2.2 | mRNA | 7053618 | 7057463 | 7053618 | ID=MS.gene074335.t1;Parent=MS.gene074335 |
chr2.2 | exon | 7053618 | 7054119 | 7053618 | ID=MS.gene074335.t1.exon1;Parent=MS.gene074335.t1 |
chr2.2 | CDS | 7053618 | 7054119 | 7053618 | ID=cds.MS.gene074335.t1;Parent=MS.gene074335.t1 |
chr2.2 | exon | 7054240 | 7054367 | 7054240 | ID=MS.gene074335.t1.exon2;Parent=MS.gene074335.t1 |
chr2.2 | CDS | 7054240 | 7054367 | 7054240 | ID=cds.MS.gene074335.t1;Parent=MS.gene074335.t1 |
chr2.2 | exon | 7055118 | 7055283 | 7055118 | ID=MS.gene074335.t1.exon3;Parent=MS.gene074335.t1 |
chr2.2 | CDS | 7055118 | 7055283 | 7055118 | ID=cds.MS.gene074335.t1;Parent=MS.gene074335.t1 |
chr2.2 | exon | 7055375 | 7055493 | 7055375 | ID=MS.gene074335.t1.exon4;Parent=MS.gene074335.t1 |
chr2.2 | CDS | 7055375 | 7055493 | 7055375 | ID=cds.MS.gene074335.t1;Parent=MS.gene074335.t1 |
chr2.2 | exon | 7055610 | 7055690 | 7055610 | ID=MS.gene074335.t1.exon5;Parent=MS.gene074335.t1 |
chr2.2 | CDS | 7055610 | 7055690 | 7055610 | ID=cds.MS.gene074335.t1;Parent=MS.gene074335.t1 |
chr2.2 | exon | 7056064 | 7056150 | 7056064 | ID=MS.gene074335.t1.exon6;Parent=MS.gene074335.t1 |
chr2.2 | CDS | 7056064 | 7056150 | 7056064 | ID=cds.MS.gene074335.t1;Parent=MS.gene074335.t1 |
chr2.2 | exon | 7056275 | 7056349 | 7056275 | ID=MS.gene074335.t1.exon7;Parent=MS.gene074335.t1 |
chr2.2 | CDS | 7056275 | 7056349 | 7056275 | ID=cds.MS.gene074335.t1;Parent=MS.gene074335.t1 |
chr2.2 | exon | 7056488 | 7056556 | 7056488 | ID=MS.gene074335.t1.exon8;Parent=MS.gene074335.t1 |
chr2.2 | CDS | 7056488 | 7056556 | 7056488 | ID=cds.MS.gene074335.t1;Parent=MS.gene074335.t1 |
chr2.2 | exon | 7056641 | 7056721 | 7056641 | ID=MS.gene074335.t1.exon9;Parent=MS.gene074335.t1 |
chr2.2 | CDS | 7056641 | 7056721 | 7056641 | ID=cds.MS.gene074335.t1;Parent=MS.gene074335.t1 |
chr2.2 | exon | 7056814 | 7056948 | 7056814 | ID=MS.gene074335.t1.exon10;Parent=MS.gene074335.t1 |
chr2.2 | CDS | 7056814 | 7056948 | 7056814 | ID=cds.MS.gene074335.t1;Parent=MS.gene074335.t1 |
chr2.2 | exon | 7057079 | 7057135 | 7057079 | ID=MS.gene074335.t1.exon11;Parent=MS.gene074335.t1 |
chr2.2 | CDS | 7057079 | 7057135 | 7057079 | ID=cds.MS.gene074335.t1;Parent=MS.gene074335.t1 |
chr2.2 | exon | 7057281 | 7057463 | 7057281 | ID=MS.gene074335.t1.exon12;Parent=MS.gene074335.t1 |
chr2.2 | CDS | 7057281 | 7057463 | 7057281 | ID=cds.MS.gene074335.t1;Parent=MS.gene074335.t1 |
Gene Sequence |
Protein sequence |