Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene058947.t1 | XP_003597231.1 | 95.4 | 565 | 25 | 1 | 1 | 565 | 1 | 564 | 1.00E-284 | 988.8 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene058947.t1 | Q9FF55 | 66.2 | 557 | 166 | 3 | 2 | 536 | 4 | 560 | 1.6e-217 | 756.9 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene058947.t1 | G7IRR6 | 95.4 | 565 | 25 | 1 | 1 | 565 | 1 | 564 | 7.5e-285 | 988.8 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene058947 | MS.gene074335 | 0.883912 | 3.00E-71 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene057716 | MS.gene058947 | PPI |
MS.gene003513 | MS.gene058947 | PPI |
MS.gene058947 | MS.gene36312 | PPI |
MS.gene75421 | MS.gene058947 | PPI |
MS.gene013810 | MS.gene058947 | PPI |
MS.gene70661 | MS.gene058947 | PPI |
MS.gene045060 | MS.gene058947 | PPI |
MS.gene06356 | MS.gene058947 | PPI |
MS.gene058947 | MS.gene90970 | PPI |
MS.gene52083 | MS.gene058947 | PPI |
MS.gene025228 | MS.gene058947 | PPI |
MS.gene40930 | MS.gene058947 | PPI |
MS.gene037185 | MS.gene058947 | PPI |
MS.gene022334 | MS.gene058947 | PPI |
MS.gene013275 | MS.gene058947 | PPI |
MS.gene85112 | MS.gene058947 | PPI |
MS.gene76495 | MS.gene058947 | PPI |
MS.gene64440 | MS.gene058947 | PPI |
MS.gene25997 | MS.gene058947 | PPI |
MS.gene049245 | MS.gene058947 | PPI |
MS.gene91774 | MS.gene058947 | PPI |
MS.gene058947 | MS.gene47817 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene058947.t1 | MTR_2g094180 | 95.963 | 545 | 21 | 1 | 21 | 565 | 21 | 564 | 0.0 | 1018 |
MS.gene058947.t1 | MTR_4g059450 | 72.261 | 566 | 138 | 4 | 14 | 565 | 23 | 583 | 0.0 | 790 |
MS.gene058947.t1 | MTR_2g101880 | 34.305 | 446 | 290 | 2 | 84 | 527 | 67 | 511 | 8.89e-95 | 299 |
MS.gene058947.t1 | MTR_3g088220 | 36.239 | 436 | 256 | 13 | 81 | 501 | 35 | 463 | 5.93e-75 | 247 |
MS.gene058947.t1 | MTR_3g088220 | 42.735 | 117 | 61 | 4 | 74 | 184 | 372 | 488 | 2.47e-17 | 85.5 |
MS.gene058947.t1 | MTR_2g093500 | 28.329 | 353 | 213 | 4 | 175 | 527 | 199 | 511 | 1.97e-48 | 176 |
MS.gene058947.t1 | MTR_1g096790 | 29.971 | 347 | 210 | 11 | 72 | 401 | 20 | 350 | 4.45e-25 | 108 |
MS.gene058947.t1 | MTR_7g112040 | 41.618 | 173 | 79 | 6 | 80 | 232 | 25 | 195 | 3.23e-24 | 104 |
MS.gene058947.t1 | MTR_7g112040 | 35.135 | 185 | 107 | 5 | 320 | 502 | 56 | 229 | 1.38e-19 | 90.9 |
MS.gene058947.t1 | MTR_7g112040 | 34.426 | 183 | 108 | 6 | 81 | 258 | 144 | 319 | 1.43e-17 | 85.1 |
MS.gene058947.t1 | MTR_7g112040 | 37.736 | 106 | 61 | 3 | 418 | 521 | 25 | 127 | 1.65e-14 | 75.5 |
MS.gene058947.t1 | MTR_1g087520 | 37.297 | 185 | 103 | 5 | 320 | 502 | 61 | 234 | 4.80e-23 | 101 |
MS.gene058947.t1 | MTR_1g087520 | 35.119 | 168 | 89 | 4 | 84 | 232 | 34 | 200 | 1.39e-20 | 94.0 |
MS.gene058947.t1 | MTR_1g087520 | 35.185 | 108 | 65 | 3 | 426 | 531 | 38 | 142 | 2.34e-13 | 72.0 |
MS.gene058947.t1 | MTR_5g084930 | 41.600 | 125 | 65 | 4 | 56 | 175 | 135 | 256 | 1.21e-18 | 89.0 |
MS.gene058947.t1 | MTR_5g084930 | 48.913 | 92 | 44 | 3 | 81 | 170 | 30 | 120 | 1.39e-16 | 82.8 |
MS.gene058947.t1 | MTR_5g084930 | 27.670 | 206 | 131 | 6 | 323 | 520 | 64 | 259 | 9.10e-13 | 70.9 |
MS.gene058947.t1 | MTR_5g084930 | 32.609 | 138 | 87 | 3 | 425 | 560 | 36 | 169 | 1.31e-11 | 67.4 |
MS.gene058947.t1 | MTR_2g021750 | 45.361 | 97 | 50 | 3 | 81 | 175 | 30 | 125 | 1.15e-13 | 72.8 |
MS.gene058947.t1 | MTR_4g080800 | 30.909 | 110 | 59 | 2 | 84 | 176 | 146 | 255 | 8.87e-12 | 67.8 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene058947.t1 | AT5G60640 | 70.077 | 518 | 143 | 3 | 59 | 565 | 81 | 597 | 0.0 | 756 |
MS.gene058947.t1 | AT3G54960 | 60.633 | 569 | 202 | 7 | 12 | 565 | 18 | 579 | 0.0 | 689 |
MS.gene058947.t1 | AT5G60640 | 71.175 | 451 | 128 | 1 | 59 | 507 | 81 | 531 | 0.0 | 684 |
MS.gene058947.t1 | AT3G54960 | 60.000 | 490 | 180 | 4 | 12 | 486 | 18 | 506 | 0.0 | 603 |
MS.gene058947.t1 | AT5G60640 | 56.564 | 518 | 149 | 7 | 59 | 565 | 81 | 533 | 0.0 | 563 |
MS.gene058947.t1 | AT3G16110 | 34.633 | 436 | 281 | 3 | 78 | 510 | 74 | 508 | 6.99e-93 | 295 |
MS.gene058947.t1 | AT1G52260 | 32.943 | 513 | 319 | 8 | 3 | 510 | 18 | 510 | 5.32e-92 | 293 |
MS.gene058947.t1 | AT1G21750 | 39.316 | 468 | 248 | 19 | 81 | 526 | 32 | 485 | 1.13e-85 | 275 |
MS.gene058947.t1 | AT1G21750 | 38.961 | 462 | 251 | 17 | 81 | 524 | 32 | 480 | 7.11e-85 | 273 |
MS.gene058947.t1 | AT1G77510 | 36.566 | 495 | 273 | 19 | 81 | 553 | 31 | 506 | 6.25e-79 | 258 |
MS.gene058947.t1 | AT1G77510 | 42.478 | 113 | 63 | 2 | 73 | 183 | 367 | 479 | 1.05e-16 | 83.6 |
MS.gene058947.t1 | AT2G47470 | 31.169 | 231 | 117 | 8 | 84 | 284 | 28 | 246 | 2.87e-21 | 94.4 |
MS.gene058947.t1 | AT2G47470 | 34.054 | 185 | 109 | 5 | 320 | 502 | 55 | 228 | 5.85e-21 | 93.2 |
MS.gene058947.t1 | AT2G47470 | 33.333 | 111 | 67 | 3 | 432 | 540 | 37 | 142 | 3.86e-13 | 70.5 |
MS.gene058947.t1 | AT2G47470 | 34.054 | 185 | 109 | 5 | 320 | 502 | 55 | 228 | 7.85e-21 | 94.4 |
MS.gene058947.t1 | AT2G47470 | 31.169 | 231 | 117 | 8 | 84 | 284 | 28 | 246 | 9.93e-21 | 94.0 |
MS.gene058947.t1 | AT2G47470 | 34.579 | 107 | 63 | 3 | 436 | 540 | 41 | 142 | 5.03e-13 | 70.9 |
MS.gene058947.t1 | AT2G47470 | 34.054 | 185 | 109 | 5 | 320 | 502 | 55 | 228 | 9.85e-21 | 94.0 |
MS.gene058947.t1 | AT2G47470 | 31.169 | 231 | 117 | 8 | 84 | 284 | 28 | 246 | 1.03e-20 | 94.0 |
MS.gene058947.t1 | AT2G47470 | 34.579 | 107 | 63 | 3 | 436 | 540 | 41 | 142 | 4.13e-13 | 71.2 |
MS.gene058947.t1 | AT2G47470 | 34.054 | 185 | 109 | 5 | 320 | 502 | 55 | 228 | 1.27e-20 | 94.4 |
MS.gene058947.t1 | AT2G47470 | 31.169 | 231 | 117 | 8 | 84 | 284 | 28 | 246 | 1.61e-20 | 94.0 |
MS.gene058947.t1 | AT2G47470 | 35.714 | 98 | 59 | 2 | 436 | 531 | 41 | 136 | 4.52e-13 | 71.2 |
MS.gene058947.t1 | AT1G35620 | 28.829 | 222 | 136 | 7 | 81 | 291 | 34 | 244 | 1.05e-18 | 89.4 |
MS.gene058947.t1 | AT1G04980 | 29.018 | 224 | 133 | 9 | 82 | 283 | 170 | 389 | 1.84e-17 | 85.5 |
MS.gene058947.t1 | AT1G04980 | 44.330 | 97 | 51 | 3 | 81 | 175 | 34 | 129 | 1.37e-16 | 82.8 |
MS.gene058947.t1 | AT1G04980 | 27.700 | 213 | 133 | 6 | 320 | 520 | 65 | 268 | 8.04e-15 | 77.4 |
MS.gene058947.t1 | AT2G32920 | 46.465 | 99 | 45 | 4 | 82 | 175 | 165 | 260 | 2.85e-17 | 85.1 |
MS.gene058947.t1 | AT2G32920 | 42.308 | 104 | 57 | 3 | 81 | 182 | 32 | 134 | 1.50e-16 | 82.8 |
MS.gene058947.t1 | AT2G32920 | 27.670 | 206 | 133 | 5 | 323 | 520 | 66 | 263 | 1.53e-13 | 73.2 |
MS.gene058947.t1 | AT4G27080 | 32.283 | 127 | 68 | 3 | 79 | 188 | 141 | 266 | 3.84e-13 | 72.4 |
MS.gene058947.t1 | AT4G27080 | 32.283 | 127 | 68 | 3 | 79 | 188 | 193 | 318 | 4.94e-13 | 72.0 |
Find 121 sgRNAs with CRISPR-Local
Find 223 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ATCAAATAGCTTACACTTTC+AGG | 0.073604 | 2.3:-7595253 | None:intergenic |
TAGGAGTTGAGGCTGGTTTC+TGG | 0.153170 | 2.3:-7596063 | None:intergenic |
GAAATTGCTCCCAGTATTTC+AGG | 0.203282 | 2.3:+7594343 | MS.gene058947:CDS |
GAAGAAAAGCTCAACCATTT+TGG | 0.206003 | 2.3:+7593963 | MS.gene058947:CDS |
ACATCAGAGCTCTCTGATTT+AGG | 0.211013 | 2.3:-7596082 | None:intergenic |
GTCGCAGCGGCGGCATATTC+TGG | 0.211215 | 2.3:-7592663 | None:intergenic |
TTCTGAGACCAAAGTTGTTT+TGG | 0.212145 | 2.3:+7593026 | MS.gene058947:CDS |
TGCTCAGAAATTTGATGTTC+AGG | 0.255407 | 2.3:+7592746 | MS.gene058947:CDS |
TAGCTTACACTTTCAGGAAT+TGG | 0.267348 | 2.3:-7595247 | None:intergenic |
ATAATTACCTGTTTCTTGAT+TGG | 0.283200 | 2.3:-7594180 | None:intergenic |
TTGAAAAGCTTTGCAACTTC+AGG | 0.285270 | 2.3:-7593891 | None:intergenic |
TTTGATGCTTCCTGAAATAC+TGG | 0.295344 | 2.3:-7594353 | None:intergenic |
GTTGCTACTTTGGTTCTCTT+TGG | 0.295651 | 2.3:-7596122 | None:intergenic |
TATACATAACATTACTTCAT+TGG | 0.319759 | 2.3:+7592981 | MS.gene058947:CDS |
GTGGTGGTTTCACCAGCTTC+TGG | 0.328568 | 2.3:-7592429 | None:intergenic |
AGAAATTAAACAAACCAAAA+TGG | 0.339530 | 2.3:-7593977 | None:intergenic |
CTGCTTGAGGAACTTGTAAA+AGG | 0.346354 | 2.3:-7596017 | None:intergenic |
AGCTTACACTTTCAGGAATT+GGG | 0.357347 | 2.3:-7595246 | None:intergenic |
GCTGGTTTCTGGAGCTTGAA+TGG | 0.364344 | 2.3:-7596052 | None:intergenic |
GGTGACTATTGACAGAATTA+AGG | 0.380026 | 2.3:+7595033 | MS.gene058947:CDS |
CTGGTTTCTGGAGCTTGAAT+GGG | 0.380359 | 2.3:-7596051 | None:intergenic |
CTCCTCCAACAAGATTCCTT+TGG | 0.388801 | 2.3:+7594113 | MS.gene058947:CDS |
AAGGATCAACGCAGGGCGTT+TGG | 0.389545 | 2.3:-7593928 | None:intergenic |
TGAAAATCCAATCAAGAAAC+AGG | 0.402093 | 2.3:+7594173 | MS.gene058947:CDS |
TGACATCGCTGTTGCTACTT+TGG | 0.410750 | 2.3:-7596132 | None:intergenic |
TTTGCAAGCTTGTTGTATAT+CGG | 0.417814 | 2.3:-7595558 | None:intergenic |
AGTTTCTGAATCTTCGTAAC+CGG | 0.422776 | 2.3:-7592505 | None:intergenic |
CGCCGCTGCGACGGAATTGA+AGG | 0.429963 | 2.3:+7592674 | MS.gene058947:CDS |
ATTTGGGTTTACCTTTGCCC+TGG | 0.431662 | 2.3:-7595643 | None:intergenic |
ATACCGAAGTAATCTGAAAC+AGG | 0.440539 | 2.3:-7594814 | None:intergenic |
GTGTGGCCATTGCCAACATT+TGG | 0.443950 | 2.3:+7595533 | MS.gene058947:CDS |
TCAGATTACTTCGGTATTAG+TGG | 0.447352 | 2.3:+7594820 | MS.gene058947:CDS |
TGTTACCAAAGGAATCTTGT+TGG | 0.449876 | 2.3:-7594118 | None:intergenic |
GAGAAAACCCAAAACAACTT+TGG | 0.451359 | 2.3:-7593034 | None:intergenic |
CAACTTCAGGATCCACAGTC+TGG | 0.454592 | 2.3:-7593878 | None:intergenic |
GGAAGAAAATTTGTGTTTGA+AGG | 0.454888 | 2.3:+7595007 | MS.gene058947:CDS |
GCAGCTAGCTCCTCACTCTC+AGG | 0.456501 | 2.3:-7593822 | None:intergenic |
TCAATGAAGAAAAGAATAGT+AGG | 0.456548 | 2.3:-7592774 | None:intergenic |
CGGAATCATCGCCGTGGTGG+TGG | 0.460227 | 2.3:-7592458 | None:intergenic |
AGATGGAGGAGAAGAAGAGA+AGG | 0.463950 | 2.3:-7592350 | None:intergenic |
GCTCAGAAATTTGATGTTCA+GGG | 0.464833 | 2.3:+7592747 | MS.gene058947:CDS |
AGAGAAGGGTAGTGAGGGAA+AGG | 0.466754 | 2.3:-7592335 | None:intergenic |
GGAAGCATCAAAGTCTTTCA+AGG | 0.466842 | 2.3:+7594364 | MS.gene058947:CDS |
TTCGTCATCGAGTTCGTTTG+AGG | 0.471369 | 2.3:-7592385 | None:intergenic |
GTGGTGGTGGTGTGTGGTGG+TGG | 0.471773 | 2.3:-7592445 | None:intergenic |
GAGTTCGTTTGAGGAGAGAA+TGG | 0.472106 | 2.3:-7592376 | None:intergenic |
AGAAGAAGAGAAGGGTAGTG+AGG | 0.473537 | 2.3:-7592341 | None:intergenic |
TGTATATCGGTTCCAAATGT+TGG | 0.475373 | 2.3:-7595545 | None:intergenic |
ATGTTCACTTTGCAGTCTGA+TGG | 0.480322 | 2.3:+7595769 | MS.gene058947:intron |
GGAGAGAATGGGAGAGATGG+AGG | 0.481699 | 2.3:-7592364 | None:intergenic |
TGAGGAGAGAATGGGAGAGA+TGG | 0.485377 | 2.3:-7592367 | None:intergenic |
AAAATTTGTGTTTGAAGGAG+AGG | 0.487863 | 2.3:+7595012 | MS.gene058947:CDS |
ACTCTTCTCTTCTTCCCAGC+AGG | 0.489317 | 2.3:+7595799 | MS.gene058947:CDS |
TTTGGGTTTACCTTTGCCCT+GGG | 0.490545 | 2.3:-7595642 | None:intergenic |
CTCTCTTGTAATAGCCAAGA+TGG | 0.503883 | 2.3:+7595599 | MS.gene058947:CDS |
TTTCTTCCTCTTTCTTGACA+AGG | 0.508368 | 2.3:-7593947 | None:intergenic |
GAAGAAGAGAAGGGTAGTGA+GGG | 0.508802 | 2.3:-7592340 | None:intergenic |
TCTGATTTAGGAGTTGAGGC+TGG | 0.514207 | 2.3:-7596070 | None:intergenic |
CAGATTACTTCGGTATTAGT+GGG | 0.514292 | 2.3:+7594821 | MS.gene058947:CDS |
GAACACAAAATGAGCATCCC+AGG | 0.515907 | 2.3:+7595625 | MS.gene058947:CDS |
ATCAAAGTCTTTCAAGGGAA+AGG | 0.517288 | 2.3:+7594370 | MS.gene058947:CDS |
GGTGATGTGAAAATAGTTGT+TGG | 0.517934 | 2.3:+7595352 | MS.gene058947:CDS |
ACCACCACACACCACCACCA+CGG | 0.523167 | 2.3:+7592447 | MS.gene058947:CDS |
CTTCAATTCCGTCGCAGCGG+CGG | 0.523787 | 2.3:-7592673 | None:intergenic |
GTCTTCTTCGAGATCGGCGT+CGG | 0.526121 | 2.3:-7592478 | None:intergenic |
AGAATTCGACTAAAACGAAT+CGG | 0.526308 | 2.3:-7592605 | None:intergenic |
AGTTCGTTTGAGGAGAGAAT+GGG | 0.532275 | 2.3:-7592375 | None:intergenic |
TTAACTCGGCGACAGAATGA+TGG | 0.534871 | 2.3:+7595331 | MS.gene058947:intron |
ACATGGATTAAGAAGAAGAC+TGG | 0.536124 | 2.3:+7592952 | MS.gene058947:CDS |
AATATCAGATATATGCTCCT+TGG | 0.540524 | 2.3:+7595511 | MS.gene058947:intron |
ATCAGAGAGCTCTGATGTCA+AGG | 0.545354 | 2.3:+7596087 | MS.gene058947:CDS |
GCATACACCGGAAACGATGA+TGG | 0.546485 | 2.3:+7594986 | MS.gene058947:CDS |
GCAGTTGATCTTTGTGCTTG+TGG | 0.546998 | 2.3:+7594765 | MS.gene058947:intron |
TACCAAAGGAATCTTGTTGG+AGG | 0.552032 | 2.3:-7594115 | None:intergenic |
GATGGAGGAGAAGAAGAGAA+GGG | 0.553609 | 2.3:-7592349 | None:intergenic |
GAAACTGATAACGAAGATGT+TGG | 0.553749 | 2.3:+7594787 | MS.gene058947:CDS |
AGAATATGCCGCCGCTGCGA+CGG | 0.557120 | 2.3:+7592665 | MS.gene058947:CDS |
AGCAACTTCATTATCTTCAG+TGG | 0.558524 | 2.3:-7592727 | None:intergenic |
GCTGGGAAGAAGAGAAGAGT+GGG | 0.561355 | 2.3:-7595796 | None:intergenic |
AATTGTCTTGGATGAGTCAA+AGG | 0.563831 | 2.3:+7595390 | MS.gene058947:CDS |
GCCGTGGTGGTGGTGTGTGG+TGG | 0.565946 | 2.3:-7592448 | None:intergenic |
TTCCTCGACGAACCAGAAGC+TGG | 0.565959 | 2.3:+7592417 | MS.gene058947:CDS |
GGAGAAGTCTTCTTCGAGAT+CGG | 0.567305 | 2.3:-7592484 | None:intergenic |
GCTCTCTGATTTAGGAGTTG+AGG | 0.567708 | 2.3:-7596074 | None:intergenic |
AGCTGCGGCTTCACGTCTTG+AGG | 0.570216 | 2.3:+7593839 | MS.gene058947:CDS |
AAGCCTGTTTCAGATTACTT+CGG | 0.573742 | 2.3:+7594811 | MS.gene058947:CDS |
GTTGATCCTTGTCAAGAAAG+AGG | 0.574493 | 2.3:+7593941 | MS.gene058947:CDS |
TTCTTGACAAGGATCAACGC+AGG | 0.576510 | 2.3:-7593936 | None:intergenic |
CAGATATATGCTCCTTGGTG+TGG | 0.578248 | 2.3:+7595516 | MS.gene058947:intron |
GATCTCGAAGAAGACTTCTC+CGG | 0.588882 | 2.3:+7592486 | MS.gene058947:CDS |
AAGTAGCAACAGCGATGTCA+AGG | 0.589607 | 2.3:+7596135 | MS.gene058947:CDS |
TCGGTTCCAAATGTTGGCAA+TGG | 0.589689 | 2.3:-7595539 | None:intergenic |
ATCGCCGTGGTGGTGGTGTG+TGG | 0.590102 | 2.3:-7592451 | None:intergenic |
CACCAGCTTCTGGTTCGTCG+AGG | 0.592591 | 2.3:-7592419 | None:intergenic |
GGATTGATGCATGCTGCTTG+AGG | 0.593443 | 2.3:-7596030 | None:intergenic |
GGTGTTCATAAGAGTTACAC+TGG | 0.600709 | 2.3:+7592798 | MS.gene058947:CDS |
AAATGAGCATCCCAGGGCAA+AGG | 0.601467 | 2.3:+7595632 | MS.gene058947:CDS |
GTCAAAGGACGTTCTCCTTG+AGG | 0.604589 | 2.3:+7595405 | MS.gene058947:CDS |
TATGTAGGGTCCTGAGAGTG+AGG | 0.607409 | 2.3:+7593812 | MS.gene058947:intron |
GCCGCTGCGACGGAATTGAA+GGG | 0.607410 | 2.3:+7592675 | MS.gene058947:CDS |
ATTAAGAAGAAGACTGGACC+TGG | 0.609346 | 2.3:+7592958 | MS.gene058947:CDS |
GAAGTAATGTTATGTATACC+AGG | 0.613032 | 2.3:-7592976 | None:intergenic |
ACCCTTCAATTCCGTCGCAG+CGG | 0.618790 | 2.3:-7592676 | None:intergenic |
GTGTGGTCATTGTCAAGCAT+TGG | 0.618986 | 2.3:+7592638 | MS.gene058947:CDS |
GAAGCATCAAAGTCTTTCAA+GGG | 0.619244 | 2.3:+7594365 | MS.gene058947:CDS |
TGCTGGGAAGAAGAGAAGAG+TGG | 0.622841 | 2.3:-7595797 | None:intergenic |
CGTCGGAATCATCGCCGTGG+TGG | 0.624569 | 2.3:-7592461 | None:intergenic |
GAATTCTACGCACCATGGTG+TGG | 0.628556 | 2.3:+7592621 | MS.gene058947:CDS |
CAAGAGAGTCAATACTGCGA+AGG | 0.629198 | 2.3:-7595584 | None:intergenic |
TCTTGACAAGGATCAACGCA+GGG | 0.634558 | 2.3:-7593935 | None:intergenic |
CTTGTAATAGCCAAGATGGA+CGG | 0.635238 | 2.3:+7595603 | MS.gene058947:CDS |
TAGTCGAATTCTACGCACCA+TGG | 0.639660 | 2.3:+7592616 | MS.gene058947:CDS |
TTGATGCTTCCTGAAATACT+GGG | 0.651591 | 2.3:-7594352 | None:intergenic |
AACACAAAATGAGCATCCCA+GGG | 0.664470 | 2.3:+7595626 | MS.gene058947:CDS |
TGTTGGCAATGGCCACACCA+AGG | 0.684405 | 2.3:-7595528 | None:intergenic |
CGGCGTCGGAATCATCGCCG+TGG | 0.685072 | 2.3:-7592464 | None:intergenic |
GCAGAGAAGCTATTGTGACA+TGG | 0.687793 | 2.3:+7592935 | MS.gene058947:intron |
TGAGAGTGAGGAGCTAGCTG+CGG | 0.699295 | 2.3:+7593824 | MS.gene058947:CDS |
ATGCAGGTACTTGCATACAC+CGG | 0.700002 | 2.3:+7594974 | MS.gene058947:intron |
CTGGGAAGAAGAGAAGAGTG+GGG | 0.702683 | 2.3:-7595795 | None:intergenic |
GCTTGACAATGACCACACCA+TGG | 0.739924 | 2.3:-7592633 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AATGAGATTATATTATAATA+AGG | - | chr2.3:7594218-7594237 | None:intergenic | 10.0% |
!! | TTATTATAATATAATCTCAT+TGG | + | chr2.3:7594217-7594236 | MS.gene058947:intron | 10.0% |
!!! | GAAAAATAAATAATTACTTT+TGG | - | chr2.3:7594853-7594872 | None:intergenic | 10.0% |
!!! | TTGAAATTTTATTCAATTTT+TGG | + | chr2.3:7592871-7592890 | MS.gene058947:intron | 10.0% |
!! | ATCTTGTATTGTTAATTTAA+TGG | + | chr2.3:7595481-7595500 | MS.gene058947:intron | 15.0% |
!! | AAATATAACTGGTAAAATAG+AGG | - | chr2.3:7595443-7595462 | None:intergenic | 20.0% |
!! | AAGATTGATCAATAAGTTAT+TGG | - | chr2.3:7595743-7595762 | None:intergenic | 20.0% |
!! | AATATAACTGGTAAAATAGA+GGG | - | chr2.3:7595442-7595461 | None:intergenic | 20.0% |
!! | AGAAATTAAACAAACCAAAA+TGG | - | chr2.3:7593980-7593999 | None:intergenic | 20.0% |
!! | AGTTAACAAAACATAATTGA+TGG | - | chr2.3:7595286-7595305 | None:intergenic | 20.0% |
!! | TATACATAACATTACTTCAT+TGG | + | chr2.3:7592981-7593000 | MS.gene058947:CDS | 20.0% |
!! | TGTATTGTTAATTTAATGGT+TGG | + | chr2.3:7595485-7595504 | MS.gene058947:intron | 20.0% |
!!! | ATTACATCTTTTGAATAACT+TGG | + | chr2.3:7594920-7594939 | MS.gene058947:intron | 20.0% |
!!! | TCAATTATGTTTTGTTAACT+TGG | + | chr2.3:7595286-7595305 | MS.gene058947:intron | 20.0% |
! | AAAGTGTAAGCTATTTGATT+TGG | + | chr2.3:7595257-7595276 | MS.gene058947:intron | 25.0% |
! | AAGGAAGAAAGTTTAATCTT+TGG | + | chr2.3:7593513-7593532 | MS.gene058947:intron | 25.0% |
! | ATTAGAGATGCAAATATAAC+TGG | - | chr2.3:7595454-7595473 | None:intergenic | 25.0% |
! | ATTAGCAAATCATAACGAAT+AGG | - | chr2.3:7593627-7593646 | None:intergenic | 25.0% |
! | ATTGCTTAATATTCACTTAC+AGG | - | chr2.3:7595841-7595860 | None:intergenic | 25.0% |
! | ATTGTTAATTTAATGGTTGG+TGG | + | chr2.3:7595488-7595507 | MS.gene058947:intron | 25.0% |
! | CCTCATTAAATGAAAGAAAA+AGG | - | chr2.3:7595125-7595144 | None:intergenic | 25.0% |
! | GTATCATCAAATTGAACAAA+GGG | - | chr2.3:7594875-7594894 | None:intergenic | 25.0% |
! | TCAATGAAGAAAAGAATAGT+AGG | - | chr2.3:7592777-7592796 | None:intergenic | 25.0% |
! | TGCATACAAATTTAAACCTT+CGG | + | chr2.3:7593561-7593580 | MS.gene058947:intron | 25.0% |
!! | ACTATTCTTTTCTTCATTGA+TGG | + | chr2.3:7592777-7592796 | MS.gene058947:CDS | 25.0% |
!! | ATAATTACCTGTTTCTTGAT+TGG | - | chr2.3:7594183-7594202 | None:intergenic | 25.0% |
!! | ATTGGATTTTCAAAGATTGT+TGG | - | chr2.3:7594165-7594184 | None:intergenic | 25.0% |
!! | CCTTTTTCTTTCATTTAATG+AGG | + | chr2.3:7595122-7595141 | MS.gene058947:intron | 25.0% |
!! | TCAAATCTTCATTTTATCTC+AGG | + | chr2.3:7595171-7595190 | MS.gene058947:intron | 25.0% |
!! | TGATTTTATAAACAGAAGCA+TGG | - | chr2.3:7594564-7594583 | None:intergenic | 25.0% |
!!! | AATTTGTTTTTCGATGAAGT+TGG | + | chr2.3:7593700-7593719 | MS.gene058947:intron | 25.0% |
!!! | ACTTTCATCTTGTCATTTTT+TGG | + | chr2.3:7594421-7594440 | MS.gene058947:intron | 25.0% |
!!! | ATGTTTGAAACTTCTTTTTC+AGG | + | chr2.3:7594289-7594308 | MS.gene058947:intron | 25.0% |
!!! | CAATTTTGATGAAATTGTCT+TGG | + | chr2.3:7595378-7595397 | MS.gene058947:CDS | 25.0% |
!!! | CTTTCATCTTGTCATTTTTT+GGG | + | chr2.3:7594422-7594441 | MS.gene058947:intron | 25.0% |
!!! | GGTTATATGTTGATTTTAAG+TGG | + | chr2.3:7593385-7593404 | MS.gene058947:intron | 25.0% |
AAAATTTGTGTTTGAAGGAG+AGG | + | chr2.3:7595012-7595031 | MS.gene058947:CDS | 30.0% | |
AAGTTATATGCTATGAAGCA+CGG | + | chr2.3:7593214-7593233 | MS.gene058947:intron | 30.0% | |
AATATCAGATATATGCTCCT+TGG | + | chr2.3:7595511-7595530 | MS.gene058947:intron | 30.0% | |
AGAATTCGACTAAAACGAAT+CGG | - | chr2.3:7592608-7592627 | None:intergenic | 30.0% | |
ATCAAATAGCTTACACTTTC+AGG | - | chr2.3:7595256-7595275 | None:intergenic | 30.0% | |
ATCAATAAGTTATTGGATGC+AGG | - | chr2.3:7595736-7595755 | None:intergenic | 30.0% | |
ATCATACACATTCTGTAACA+TGG | - | chr2.3:7595100-7595119 | None:intergenic | 30.0% | |
CGTATCATCAAATTGAACAA+AGG | - | chr2.3:7594876-7594895 | None:intergenic | 30.0% | |
CTTGTAAAAACTGTTACCAA+AGG | - | chr2.3:7594132-7594151 | None:intergenic | 30.0% | |
GAAAGTTTAATCTTTGGACT+TGG | + | chr2.3:7593519-7593538 | MS.gene058947:intron | 30.0% | |
GAAGTAATGTTATGTATACC+AGG | - | chr2.3:7592979-7592998 | None:intergenic | 30.0% | |
GAATGTAGTTAAATGTGTCT+TGG | + | chr2.3:7593289-7593308 | MS.gene058947:intron | 30.0% | |
GGAAGAAAATTTGTGTTTGA+AGG | + | chr2.3:7595007-7595026 | MS.gene058947:CDS | 30.0% | |
TGAAAATCCAATCAAGAAAC+AGG | + | chr2.3:7594173-7594192 | MS.gene058947:CDS | 30.0% | |
! | AGCAATGTCTAGTTTGAATT+TGG | - | chr2.3:7595663-7595682 | None:intergenic | 30.0% |
! | GCAATGTCTAGTTTGAATTT+GGG | - | chr2.3:7595662-7595681 | None:intergenic | 30.0% |
! | GTCTAACATGTTTGTTAACT+CGG | + | chr2.3:7595317-7595336 | MS.gene058947:intron | 30.0% |
! | TATCGAATTTTCCATCTGTA+AGG | - | chr2.3:7594071-7594090 | None:intergenic | 30.0% |
! | TCATTTTATCTCAGGCATTT+GGG | + | chr2.3:7595179-7595198 | MS.gene058947:intron | 30.0% |
! | TTCATTTTATCTCAGGCATT+TGG | + | chr2.3:7595178-7595197 | MS.gene058947:intron | 30.0% |
!! | ATTCGTAGATGGATTATCTA+TGG | - | chr2.3:7593461-7593480 | None:intergenic | 30.0% |
!! | TTTGCAAGCTTGTTGTATAT+CGG | - | chr2.3:7595561-7595580 | None:intergenic | 30.0% |
AAGCCTGTTTCAGATTACTT+CGG | + | chr2.3:7594811-7594830 | MS.gene058947:CDS | 35.0% | |
AATTGTCTTGGATGAGTCAA+AGG | + | chr2.3:7595390-7595409 | MS.gene058947:CDS | 35.0% | |
AGCAAAACTAACAGAGTCTA+AGG | - | chr2.3:7595076-7595095 | None:intergenic | 35.0% | |
AGCAACTTCATTATCTTCAG+TGG | - | chr2.3:7592730-7592749 | None:intergenic | 35.0% | |
AGCTTACACTTTCAGGAATT+GGG | - | chr2.3:7595249-7595268 | None:intergenic | 35.0% | |
AGTTTAATCTTTGGACTTGG+CGG | + | chr2.3:7593522-7593541 | MS.gene058947:intron | 35.0% | |
AGTTTCTGAATCTTCGTAAC+CGG | - | chr2.3:7592508-7592527 | None:intergenic | 35.0% | |
ATCAAAGTCTTTCAAGGGAA+AGG | + | chr2.3:7594370-7594389 | MS.gene058947:CDS | 35.0% | |
CAAAAACATAAGCACCCTTT+AGG | - | chr2.3:7594710-7594729 | None:intergenic | 35.0% | |
CAGATTACTTCGGTATTAGT+GGG | + | chr2.3:7594821-7594840 | MS.gene058947:CDS | 35.0% | |
CCTGTTATGCACAATATGTA+GGG | + | chr2.3:7593798-7593817 | MS.gene058947:intron | 35.0% | |
GAGAAAACCCAAAACAACTT+TGG | - | chr2.3:7593037-7593056 | None:intergenic | 35.0% | |
GCTCAGAAATTTGATGTTCA+GGG | + | chr2.3:7592747-7592766 | MS.gene058947:CDS | 35.0% | |
GGTGACTATTGACAGAATTA+AGG | + | chr2.3:7595033-7595052 | MS.gene058947:CDS | 35.0% | |
GGTGATGTGAAAATAGTTGT+TGG | + | chr2.3:7595352-7595371 | MS.gene058947:CDS | 35.0% | |
GTATTCTTGGAATTCGTAGA+TGG | - | chr2.3:7593472-7593491 | None:intergenic | 35.0% | |
TAGCTTACACTTTCAGGAAT+TGG | - | chr2.3:7595250-7595269 | None:intergenic | 35.0% | |
TCAGATTACTTCGGTATTAG+TGG | + | chr2.3:7594820-7594839 | MS.gene058947:CDS | 35.0% | |
TCCTGTTATGCACAATATGT+AGG | + | chr2.3:7593797-7593816 | MS.gene058947:intron | 35.0% | |
TCGATGAAGTTGGCAATTAA+AGG | + | chr2.3:7593710-7593729 | MS.gene058947:intron | 35.0% | |
TGCTCAGAAATTTGATGTTC+AGG | + | chr2.3:7592746-7592765 | MS.gene058947:CDS | 35.0% | |
TGTTACCAAAGGAATCTTGT+TGG | - | chr2.3:7594121-7594140 | None:intergenic | 35.0% | |
TTGAAAAGCTTTGCAACTTC+AGG | - | chr2.3:7593894-7593913 | None:intergenic | 35.0% | |
TTGATGCTTCCTGAAATACT+GGG | - | chr2.3:7594355-7594374 | None:intergenic | 35.0% | |
TTTCTTCCTCTTTCTTGACA+AGG | - | chr2.3:7593950-7593969 | None:intergenic | 35.0% | |
TTTGATGCTTCCTGAAATAC+TGG | - | chr2.3:7594356-7594375 | None:intergenic | 35.0% | |
! | ACATGGATTAAGAAGAAGAC+TGG | + | chr2.3:7592952-7592971 | MS.gene058947:CDS | 35.0% |
! | ACGTGTCATGGTGTTAATTA+AGG | + | chr2.3:7593494-7593513 | MS.gene058947:intron | 35.0% |
! | ATACCGAAGTAATCTGAAAC+AGG | - | chr2.3:7594817-7594836 | None:intergenic | 35.0% |
! | ATTGGGTCTGACTTGAAAAA+AGG | - | chr2.3:7595232-7595251 | None:intergenic | 35.0% |
! | ATTTTCCATCTGTAAGGACA+CGG | - | chr2.3:7594065-7594084 | None:intergenic | 35.0% |
! | CATTTTATCTCAGGCATTTG+GGG | + | chr2.3:7595180-7595199 | MS.gene058947:intron | 35.0% |
! | GAAACTGATAACGAAGATGT+TGG | + | chr2.3:7594787-7594806 | MS.gene058947:CDS | 35.0% |
! | GAAGAAAAGCTCAACCATTT+TGG | + | chr2.3:7593963-7593982 | MS.gene058947:CDS | 35.0% |
! | GAAGCATCAAAGTCTTTCAA+GGG | + | chr2.3:7594365-7594384 | MS.gene058947:CDS | 35.0% |
! | TGTCAATTTTTACCAGACTG+TGG | + | chr2.3:7593866-7593885 | MS.gene058947:CDS | 35.0% |
! | TTTTCTTCCATCATCGTTTC+CGG | - | chr2.3:7594996-7595015 | None:intergenic | 35.0% |
!! | AGAAGTGTAGCTTTGTTTCT+TGG | + | chr2.3:7593186-7593205 | MS.gene058947:intron | 35.0% |
!! | CAAAACTTTTGTTTCCTGCT+GGG | - | chr2.3:7595816-7595835 | None:intergenic | 35.0% |
!! | TCAAAACTTTTGTTTCCTGC+TGG | - | chr2.3:7595817-7595836 | None:intergenic | 35.0% |
!! | TCTGAGACCAAAGTTGTTTT+GGG | + | chr2.3:7593027-7593046 | MS.gene058947:CDS | 35.0% |
!! | TGTATATCGGTTCCAAATGT+TGG | - | chr2.3:7595548-7595567 | None:intergenic | 35.0% |
!!! | AAGGTTTTAGCTTGTCTTCA+AGG | - | chr2.3:7595213-7595232 | None:intergenic | 35.0% |
!!! | TAAACCTTCGGTGTTTTCAT+GGG | + | chr2.3:7593573-7593592 | MS.gene058947:intron | 35.0% |
!!! | TTAAACCTTCGGTGTTTTCA+TGG | + | chr2.3:7593572-7593591 | MS.gene058947:intron | 35.0% |
!!! | TTCTGAGACCAAAGTTGTTT+TGG | + | chr2.3:7593026-7593045 | MS.gene058947:CDS | 35.0% |
AAACATAAGCACCCTTTAGG+AGG | - | chr2.3:7594707-7594726 | None:intergenic | 40.0% | |
AACACAAAATGAGCATCCCA+GGG | + | chr2.3:7595626-7595645 | MS.gene058947:CDS | 40.0% | |
ACATCAGAGCTCTCTGATTT+AGG | - | chr2.3:7596085-7596104 | None:intergenic | 40.0% | |
ACCAGTTGAATTTCCAATGC+AGG | + | chr2.3:7594958-7594977 | MS.gene058947:intron | 40.0% | |
ACCTGCATTGGAAATTCAAC+TGG | - | chr2.3:7594962-7594981 | None:intergenic | 40.0% | |
AGCACAAAGATCAACTGCAA+TGG | - | chr2.3:7594763-7594782 | None:intergenic | 40.0% | |
AGGTGTAGTGTACTTCTTAG+TGG | + | chr2.3:7594512-7594531 | MS.gene058947:intron | 40.0% | |
AGTTCGTTTGAGGAGAGAAT+GGG | - | chr2.3:7592378-7592397 | None:intergenic | 40.0% | |
ATGTTCACTTTGCAGTCTGA+TGG | + | chr2.3:7595769-7595788 | MS.gene058947:intron | 40.0% | |
ATTAAGAAGAAGACTGGACC+TGG | + | chr2.3:7592958-7592977 | MS.gene058947:CDS | 40.0% | |
CCAAGAATACTAACGTGTCA+TGG | + | chr2.3:7593482-7593501 | MS.gene058947:intron | 40.0% | |
CCATGACACGTTAGTATTCT+TGG | - | chr2.3:7593485-7593504 | None:intergenic | 40.0% | |
CCCTACATATTGTGCATAAC+AGG | - | chr2.3:7593801-7593820 | None:intergenic | 40.0% | |
CTCTCTTGTAATAGCCAAGA+TGG | + | chr2.3:7595599-7595618 | MS.gene058947:CDS | 40.0% | |
CTGAATTCTTGTCGAAAGCA+AGG | - | chr2.3:7594494-7594513 | None:intergenic | 40.0% | |
CTGCTTGAGGAACTTGTAAA+AGG | - | chr2.3:7596020-7596039 | None:intergenic | 40.0% | |
CTTGCTTTCGACAAGAATTC+AGG | + | chr2.3:7594492-7594511 | MS.gene058947:intron | 40.0% | |
CTTGTAATAGCCAAGATGGA+CGG | + | chr2.3:7595603-7595622 | MS.gene058947:CDS | 40.0% | |
GAAATTGCTCCCAGTATTTC+AGG | + | chr2.3:7594343-7594362 | MS.gene058947:CDS | 40.0% | |
GGTGTAGTGTACTTCTTAGT+GGG | + | chr2.3:7594513-7594532 | MS.gene058947:intron | 40.0% | |
GGTGTTCATAAGAGTTACAC+TGG | + | chr2.3:7592798-7592817 | MS.gene058947:CDS | 40.0% | |
GTTGATCCTTGTCAAGAAAG+AGG | + | chr2.3:7593941-7593960 | MS.gene058947:CDS | 40.0% | |
TACCAAAGGAATCTTGTTGG+AGG | - | chr2.3:7594118-7594137 | None:intergenic | 40.0% | |
! | AACTAACAGAGTCTAAGGCA+AGG | - | chr2.3:7595071-7595090 | None:intergenic | 40.0% |
! | ACTAACAGAGTCTAAGGCAA+GGG | - | chr2.3:7595070-7595089 | None:intergenic | 40.0% |
! | ATTTTGTGTTCCGTCCATCT+TGG | - | chr2.3:7595616-7595635 | None:intergenic | 40.0% |
!! | GGAAGCATCAAAGTCTTTCA+AGG | + | chr2.3:7594364-7594383 | MS.gene058947:CDS | 40.0% |
!! | GTTGCTACTTTGGTTCTCTT+TGG | - | chr2.3:7596125-7596144 | None:intergenic | 40.0% |
AAGTAGCAACAGCGATGTCA+AGG | + | chr2.3:7596135-7596154 | MS.gene058947:CDS | 45.0% | |
AGAAGAAGAGAAGGGTAGTG+AGG | - | chr2.3:7592344-7592363 | None:intergenic | 45.0% | |
AGATGGAGGAGAAGAAGAGA+AGG | - | chr2.3:7592353-7592372 | None:intergenic | 45.0% | |
AGGGTCAAAGTTGTACCTCA+AGG | - | chr2.3:7595423-7595442 | None:intergenic | 45.0% | |
ATCCAGCTCTTCCTCCTAAA+GGG | + | chr2.3:7594693-7594712 | MS.gene058947:intron | 45.0% | |
ATGCAGGTACTTGCATACAC+CGG | + | chr2.3:7594974-7594993 | MS.gene058947:intron | 45.0% | |
CAAGAGAGTCAATACTGCGA+AGG | - | chr2.3:7595587-7595606 | None:intergenic | 45.0% | |
CAGATATATGCTCCTTGGTG+TGG | + | chr2.3:7595516-7595535 | MS.gene058947:intron | 45.0% | |
CTCCTCCAACAAGATTCCTT+TGG | + | chr2.3:7594113-7594132 | MS.gene058947:CDS | 45.0% | |
GAACACAAAATGAGCATCCC+AGG | + | chr2.3:7595625-7595644 | MS.gene058947:CDS | 45.0% | |
GAAGAAGAGAAGGGTAGTGA+GGG | - | chr2.3:7592343-7592362 | None:intergenic | 45.0% | |
GAGTTCGTTTGAGGAGAGAA+TGG | - | chr2.3:7592379-7592398 | None:intergenic | 45.0% | |
GATCTCGAAGAAGACTTCTC+CGG | + | chr2.3:7592486-7592505 | MS.gene058947:CDS | 45.0% | |
GATGGAGGAGAAGAAGAGAA+GGG | - | chr2.3:7592352-7592371 | None:intergenic | 45.0% | |
GCAGAGAAGCTATTGTGACA+TGG | + | chr2.3:7592935-7592954 | MS.gene058947:intron | 45.0% | |
GCAGTTGATCTTTGTGCTTG+TGG | + | chr2.3:7594765-7594784 | MS.gene058947:intron | 45.0% | |
GCTCTCTGATTTAGGAGTTG+AGG | - | chr2.3:7596077-7596096 | None:intergenic | 45.0% | |
GGAGAAGTCTTCTTCGAGAT+CGG | - | chr2.3:7592487-7592506 | None:intergenic | 45.0% | |
GTGTATGCAAGTACCTGCAT+TGG | - | chr2.3:7594974-7594993 | None:intergenic | 45.0% | |
GTGTGGTCATTGTCAAGCAT+TGG | + | chr2.3:7592638-7592657 | MS.gene058947:CDS | 45.0% | |
TAGTCGAATTCTACGCACCA+TGG | + | chr2.3:7592616-7592635 | MS.gene058947:CDS | 45.0% | |
TCAACCCATGAAAACACCGA+AGG | - | chr2.3:7593580-7593599 | None:intergenic | 45.0% | |
TCGGTTCCAAATGTTGGCAA+TGG | - | chr2.3:7595542-7595561 | None:intergenic | 45.0% | |
TCTGATTTAGGAGTTGAGGC+TGG | - | chr2.3:7596073-7596092 | None:intergenic | 45.0% | |
TCTTGACAAGGATCAACGCA+GGG | - | chr2.3:7593938-7593957 | None:intergenic | 45.0% | |
TTAACTCGGCGACAGAATGA+TGG | + | chr2.3:7595331-7595350 | MS.gene058947:intron | 45.0% | |
TTCGTCATCGAGTTCGTTTG+AGG | - | chr2.3:7592388-7592407 | None:intergenic | 45.0% | |
TTCTTGACAAGGATCAACGC+AGG | - | chr2.3:7593939-7593958 | None:intergenic | 45.0% | |
! | ACGCATTCGAACAGAAGTGT+CGG | + | chr2.3:7593353-7593372 | MS.gene058947:intron | 45.0% |
! | ATCAGAGAGCTCTGATGTCA+AGG | + | chr2.3:7596087-7596106 | MS.gene058947:CDS | 45.0% |
! | ATTTGGGTTTACCTTTGCCC+TGG | - | chr2.3:7595646-7595665 | None:intergenic | 45.0% |
! | TGACATCGCTGTTGCTACTT+TGG | - | chr2.3:7596135-7596154 | None:intergenic | 45.0% |
! | TTCATGGGTTGACTCTTGTG+TGG | + | chr2.3:7593588-7593607 | MS.gene058947:intron | 45.0% |
! | TTTGGGTTTACCTTTGCCCT+GGG | - | chr2.3:7595645-7595664 | None:intergenic | 45.0% |
!! | ACGTCTTTTTCGTCGAACTC+AGG | - | chr2.3:7592540-7592559 | None:intergenic | 45.0% |
!! | CGTCTTTTTCGTCGAACTCA+GGG | - | chr2.3:7592539-7592558 | None:intergenic | 45.0% |
!! | CTGGTTTCTGGAGCTTGAAT+GGG | - | chr2.3:7596054-7596073 | None:intergenic | 45.0% |
!! | GTCTTTTTCGTCGAACTCAG+GGG | - | chr2.3:7592538-7592557 | None:intergenic | 45.0% |
!! | TCTTTTTCGTCGAACTCAGG+GGG | - | chr2.3:7592537-7592556 | None:intergenic | 45.0% |
!! | TGACACTGACTCATCGACAT+TGG | + | chr2.3:7593240-7593259 | MS.gene058947:intron | 45.0% |
AAATGAGCATCCCAGGGCAA+AGG | + | chr2.3:7595632-7595651 | MS.gene058947:CDS | 50.0% | |
ACTCTTCTCTTCTTCCCAGC+AGG | + | chr2.3:7595799-7595818 | MS.gene058947:CDS | 50.0% | |
AGAGAAGGGTAGTGAGGGAA+AGG | - | chr2.3:7592338-7592357 | None:intergenic | 50.0% | |
AGATCACTCTCGCACACACA+TGG | - | chr2.3:7595910-7595929 | None:intergenic | 50.0% | |
CAACTTCAGGATCCACAGTC+TGG | - | chr2.3:7593881-7593900 | None:intergenic | 50.0% | |
CTGGGAAGAAGAGAAGAGTG+GGG | - | chr2.3:7595798-7595817 | None:intergenic | 50.0% | |
GAATTCTACGCACCATGGTG+TGG | + | chr2.3:7592621-7592640 | MS.gene058947:CDS | 50.0% | |
GATCACTCTCGCACACACAT+GGG | - | chr2.3:7595909-7595928 | None:intergenic | 50.0% | |
GATCCAGCTCTTCCTCCTAA+AGG | + | chr2.3:7594692-7594711 | MS.gene058947:intron | 50.0% | |
GCATACACCGGAAACGATGA+TGG | + | chr2.3:7594986-7595005 | MS.gene058947:CDS | 50.0% | |
GCTGGGAAGAAGAGAAGAGT+GGG | - | chr2.3:7595799-7595818 | None:intergenic | 50.0% | |
GCTTGACAATGACCACACCA+TGG | - | chr2.3:7592636-7592655 | None:intergenic | 50.0% | |
GTCAAAGGACGTTCTCCTTG+AGG | + | chr2.3:7595405-7595424 | MS.gene058947:CDS | 50.0% | |
GTGTGGCCATTGCCAACATT+TGG | + | chr2.3:7595533-7595552 | MS.gene058947:CDS | 50.0% | |
GTTCACCGTGTCCTTACAGA+TGG | + | chr2.3:7594057-7594076 | MS.gene058947:intron | 50.0% | |
TATGTAGGGTCCTGAGAGTG+AGG | + | chr2.3:7593812-7593831 | MS.gene058947:intron | 50.0% | |
TGAGGAGAGAATGGGAGAGA+TGG | - | chr2.3:7592370-7592389 | None:intergenic | 50.0% | |
TGCTGGGAAGAAGAGAAGAG+TGG | - | chr2.3:7595800-7595819 | None:intergenic | 50.0% | |
TGTCACTGTCGACACTGACA+CGG | - | chr2.3:7593323-7593342 | None:intergenic | 50.0% | |
TTTGGACTTGGCGGAATTCG+TGG | + | chr2.3:7593531-7593550 | MS.gene058947:intron | 50.0% | |
! | GGATTGATGCATGCTGCTTG+AGG | - | chr2.3:7596033-7596052 | None:intergenic | 50.0% |
! | GTGTCGACAGTGACACATGT+TGG | + | chr2.3:7593328-7593347 | MS.gene058947:intron | 50.0% |
!! | CAGAAGTGTCGGTGCTACAA+AGG | + | chr2.3:7593364-7593383 | MS.gene058947:intron | 50.0% |
!! | GCTGGTTTCTGGAGCTTGAA+TGG | - | chr2.3:7596055-7596074 | None:intergenic | 50.0% |
!! | TAGGAGTTGAGGCTGGTTTC+TGG | - | chr2.3:7596066-7596085 | None:intergenic | 50.0% |
ACCCTTCAATTCCGTCGCAG+CGG | - | chr2.3:7592679-7592698 | None:intergenic | 55.0% | |
GACTTGGCGGAATTCGTGGT+TGG | + | chr2.3:7593535-7593554 | MS.gene058947:intron | 55.0% | |
GGAGAGAATGGGAGAGATGG+AGG | - | chr2.3:7592367-7592386 | None:intergenic | 55.0% | |
GTCTTCTTCGAGATCGGCGT+CGG | - | chr2.3:7592481-7592500 | None:intergenic | 55.0% | |
GTGGTGGTTTCACCAGCTTC+TGG | - | chr2.3:7592432-7592451 | None:intergenic | 55.0% | |
TGAGAGTGAGGAGCTAGCTG+CGG | + | chr2.3:7593824-7593843 | MS.gene058947:CDS | 55.0% | |
TGTTGGCAATGGCCACACCA+AGG | - | chr2.3:7595531-7595550 | None:intergenic | 55.0% | |
TTCCTCGACGAACCAGAAGC+TGG | + | chr2.3:7592417-7592436 | MS.gene058947:CDS | 55.0% | |
TTTCGTCGAACTCAGGGGGT+TGG | - | chr2.3:7592533-7592552 | None:intergenic | 55.0% | |
! | AAGGATCAACGCAGGGCGTT+TGG | - | chr2.3:7593931-7593950 | None:intergenic | 55.0% |
! | CACCCTTTAGGAGGAAGAGC+TGG | - | chr2.3:7594698-7594717 | None:intergenic | 55.0% |
ACCACCACACACCACCACCA+CGG | + | chr2.3:7592447-7592466 | MS.gene058947:CDS | 60.0% | |
AGAATATGCCGCCGCTGCGA+CGG | + | chr2.3:7592665-7592684 | MS.gene058947:CDS | 60.0% | |
AGCTGCGGCTTCACGTCTTG+AGG | + | chr2.3:7593839-7593858 | MS.gene058947:CDS | 60.0% | |
CTTCAATTCCGTCGCAGCGG+CGG | - | chr2.3:7592676-7592695 | None:intergenic | 60.0% | |
GCAGCTAGCTCCTCACTCTC+AGG | - | chr2.3:7593825-7593844 | None:intergenic | 60.0% | |
GCCGCTGCGACGGAATTGAA+GGG | + | chr2.3:7592675-7592694 | MS.gene058947:CDS | 60.0% | |
!! | CACCAGCTTCTGGTTCGTCG+AGG | - | chr2.3:7592422-7592441 | None:intergenic | 60.0% |
CGCCGCTGCGACGGAATTGA+AGG | + | chr2.3:7592674-7592693 | MS.gene058947:CDS | 65.0% | |
CGGAATCATCGCCGTGGTGG+TGG | - | chr2.3:7592461-7592480 | None:intergenic | 65.0% | |
CGTCGGAATCATCGCCGTGG+TGG | - | chr2.3:7592464-7592483 | None:intergenic | 65.0% | |
GTCGCAGCGGCGGCATATTC+TGG | - | chr2.3:7592666-7592685 | None:intergenic | 65.0% | |
!! | ATCGCCGTGGTGGTGGTGTG+TGG | - | chr2.3:7592454-7592473 | None:intergenic | 65.0% |
!! | GTGGTGGTGGTGTGTGGTGG+TGG | - | chr2.3:7592448-7592467 | None:intergenic | 65.0% |
! | CGGCGTCGGAATCATCGCCG+TGG | - | chr2.3:7592467-7592486 | None:intergenic | 70.0% |
!! | GCCGTGGTGGTGGTGTGTGG+TGG | - | chr2.3:7592451-7592470 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.3 | gene | 7592318 | 7596168 | 7592318 | ID=MS.gene058947 |
chr2.3 | mRNA | 7592318 | 7596168 | 7592318 | ID=MS.gene058947.t1;Parent=MS.gene058947 |
chr2.3 | exon | 7592318 | 7592832 | 7592318 | ID=MS.gene058947.t1.exon1;Parent=MS.gene058947.t1 |
chr2.3 | CDS | 7592318 | 7592832 | 7592318 | ID=cds.MS.gene058947.t1;Parent=MS.gene058947.t1 |
chr2.3 | exon | 7592939 | 7593068 | 7592939 | ID=MS.gene058947.t1.exon2;Parent=MS.gene058947.t1 |
chr2.3 | CDS | 7592939 | 7593068 | 7592939 | ID=cds.MS.gene058947.t1;Parent=MS.gene058947.t1 |
chr2.3 | exon | 7593819 | 7593984 | 7593819 | ID=MS.gene058947.t1.exon3;Parent=MS.gene058947.t1 |
chr2.3 | CDS | 7593819 | 7593984 | 7593819 | ID=cds.MS.gene058947.t1;Parent=MS.gene058947.t1 |
chr2.3 | exon | 7594076 | 7594194 | 7594076 | ID=MS.gene058947.t1.exon4;Parent=MS.gene058947.t1 |
chr2.3 | CDS | 7594076 | 7594194 | 7594076 | ID=cds.MS.gene058947.t1;Parent=MS.gene058947.t1 |
chr2.3 | exon | 7594311 | 7594391 | 7594311 | ID=MS.gene058947.t1.exon5;Parent=MS.gene058947.t1 |
chr2.3 | CDS | 7594311 | 7594391 | 7594311 | ID=cds.MS.gene058947.t1;Parent=MS.gene058947.t1 |
chr2.3 | exon | 7594769 | 7594855 | 7594769 | ID=MS.gene058947.t1.exon6;Parent=MS.gene058947.t1 |
chr2.3 | CDS | 7594769 | 7594855 | 7594769 | ID=cds.MS.gene058947.t1;Parent=MS.gene058947.t1 |
chr2.3 | exon | 7594980 | 7595054 | 7594980 | ID=MS.gene058947.t1.exon7;Parent=MS.gene058947.t1 |
chr2.3 | CDS | 7594980 | 7595054 | 7594980 | ID=cds.MS.gene058947.t1;Parent=MS.gene058947.t1 |
chr2.3 | exon | 7595193 | 7595261 | 7595193 | ID=MS.gene058947.t1.exon8;Parent=MS.gene058947.t1 |
chr2.3 | CDS | 7595193 | 7595261 | 7595193 | ID=cds.MS.gene058947.t1;Parent=MS.gene058947.t1 |
chr2.3 | exon | 7595346 | 7595426 | 7595346 | ID=MS.gene058947.t1.exon9;Parent=MS.gene058947.t1 |
chr2.3 | CDS | 7595346 | 7595426 | 7595346 | ID=cds.MS.gene058947.t1;Parent=MS.gene058947.t1 |
chr2.3 | exon | 7595519 | 7595653 | 7595519 | ID=MS.gene058947.t1.exon10;Parent=MS.gene058947.t1 |
chr2.3 | CDS | 7595519 | 7595653 | 7595519 | ID=cds.MS.gene058947.t1;Parent=MS.gene058947.t1 |
chr2.3 | exon | 7595784 | 7595840 | 7595784 | ID=MS.gene058947.t1.exon11;Parent=MS.gene058947.t1 |
chr2.3 | CDS | 7595784 | 7595840 | 7595784 | ID=cds.MS.gene058947.t1;Parent=MS.gene058947.t1 |
chr2.3 | exon | 7595986 | 7596168 | 7595986 | ID=MS.gene058947.t1.exon12;Parent=MS.gene058947.t1 |
chr2.3 | CDS | 7595986 | 7596168 | 7595986 | ID=cds.MS.gene058947.t1;Parent=MS.gene058947.t1 |
Gene Sequence |
Protein sequence |