Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene058947.t1 | XP_003597231.1 | 95.4 | 565 | 25 | 1 | 1 | 565 | 1 | 564 | 1.00E-284 | 988.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene058947.t1 | Q9FF55 | 66.2 | 557 | 166 | 3 | 2 | 536 | 4 | 560 | 1.6e-217 | 756.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene058947.t1 | G7IRR6 | 95.4 | 565 | 25 | 1 | 1 | 565 | 1 | 564 | 7.5e-285 | 988.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene058947 | MS.gene074335 | 0.883912 | 3.00E-71 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene057716 | MS.gene058947 | PPI |
| MS.gene003513 | MS.gene058947 | PPI |
| MS.gene058947 | MS.gene36312 | PPI |
| MS.gene75421 | MS.gene058947 | PPI |
| MS.gene013810 | MS.gene058947 | PPI |
| MS.gene70661 | MS.gene058947 | PPI |
| MS.gene045060 | MS.gene058947 | PPI |
| MS.gene06356 | MS.gene058947 | PPI |
| MS.gene058947 | MS.gene90970 | PPI |
| MS.gene52083 | MS.gene058947 | PPI |
| MS.gene025228 | MS.gene058947 | PPI |
| MS.gene40930 | MS.gene058947 | PPI |
| MS.gene037185 | MS.gene058947 | PPI |
| MS.gene022334 | MS.gene058947 | PPI |
| MS.gene013275 | MS.gene058947 | PPI |
| MS.gene85112 | MS.gene058947 | PPI |
| MS.gene76495 | MS.gene058947 | PPI |
| MS.gene64440 | MS.gene058947 | PPI |
| MS.gene25997 | MS.gene058947 | PPI |
| MS.gene049245 | MS.gene058947 | PPI |
| MS.gene91774 | MS.gene058947 | PPI |
| MS.gene058947 | MS.gene47817 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene058947.t1 | MTR_2g094180 | 95.963 | 545 | 21 | 1 | 21 | 565 | 21 | 564 | 0.0 | 1018 |
| MS.gene058947.t1 | MTR_4g059450 | 72.261 | 566 | 138 | 4 | 14 | 565 | 23 | 583 | 0.0 | 790 |
| MS.gene058947.t1 | MTR_2g101880 | 34.305 | 446 | 290 | 2 | 84 | 527 | 67 | 511 | 8.89e-95 | 299 |
| MS.gene058947.t1 | MTR_3g088220 | 36.239 | 436 | 256 | 13 | 81 | 501 | 35 | 463 | 5.93e-75 | 247 |
| MS.gene058947.t1 | MTR_3g088220 | 42.735 | 117 | 61 | 4 | 74 | 184 | 372 | 488 | 2.47e-17 | 85.5 |
| MS.gene058947.t1 | MTR_2g093500 | 28.329 | 353 | 213 | 4 | 175 | 527 | 199 | 511 | 1.97e-48 | 176 |
| MS.gene058947.t1 | MTR_1g096790 | 29.971 | 347 | 210 | 11 | 72 | 401 | 20 | 350 | 4.45e-25 | 108 |
| MS.gene058947.t1 | MTR_7g112040 | 41.618 | 173 | 79 | 6 | 80 | 232 | 25 | 195 | 3.23e-24 | 104 |
| MS.gene058947.t1 | MTR_7g112040 | 35.135 | 185 | 107 | 5 | 320 | 502 | 56 | 229 | 1.38e-19 | 90.9 |
| MS.gene058947.t1 | MTR_7g112040 | 34.426 | 183 | 108 | 6 | 81 | 258 | 144 | 319 | 1.43e-17 | 85.1 |
| MS.gene058947.t1 | MTR_7g112040 | 37.736 | 106 | 61 | 3 | 418 | 521 | 25 | 127 | 1.65e-14 | 75.5 |
| MS.gene058947.t1 | MTR_1g087520 | 37.297 | 185 | 103 | 5 | 320 | 502 | 61 | 234 | 4.80e-23 | 101 |
| MS.gene058947.t1 | MTR_1g087520 | 35.119 | 168 | 89 | 4 | 84 | 232 | 34 | 200 | 1.39e-20 | 94.0 |
| MS.gene058947.t1 | MTR_1g087520 | 35.185 | 108 | 65 | 3 | 426 | 531 | 38 | 142 | 2.34e-13 | 72.0 |
| MS.gene058947.t1 | MTR_5g084930 | 41.600 | 125 | 65 | 4 | 56 | 175 | 135 | 256 | 1.21e-18 | 89.0 |
| MS.gene058947.t1 | MTR_5g084930 | 48.913 | 92 | 44 | 3 | 81 | 170 | 30 | 120 | 1.39e-16 | 82.8 |
| MS.gene058947.t1 | MTR_5g084930 | 27.670 | 206 | 131 | 6 | 323 | 520 | 64 | 259 | 9.10e-13 | 70.9 |
| MS.gene058947.t1 | MTR_5g084930 | 32.609 | 138 | 87 | 3 | 425 | 560 | 36 | 169 | 1.31e-11 | 67.4 |
| MS.gene058947.t1 | MTR_2g021750 | 45.361 | 97 | 50 | 3 | 81 | 175 | 30 | 125 | 1.15e-13 | 72.8 |
| MS.gene058947.t1 | MTR_4g080800 | 30.909 | 110 | 59 | 2 | 84 | 176 | 146 | 255 | 8.87e-12 | 67.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene058947.t1 | AT5G60640 | 70.077 | 518 | 143 | 3 | 59 | 565 | 81 | 597 | 0.0 | 756 |
| MS.gene058947.t1 | AT3G54960 | 60.633 | 569 | 202 | 7 | 12 | 565 | 18 | 579 | 0.0 | 689 |
| MS.gene058947.t1 | AT5G60640 | 71.175 | 451 | 128 | 1 | 59 | 507 | 81 | 531 | 0.0 | 684 |
| MS.gene058947.t1 | AT3G54960 | 60.000 | 490 | 180 | 4 | 12 | 486 | 18 | 506 | 0.0 | 603 |
| MS.gene058947.t1 | AT5G60640 | 56.564 | 518 | 149 | 7 | 59 | 565 | 81 | 533 | 0.0 | 563 |
| MS.gene058947.t1 | AT3G16110 | 34.633 | 436 | 281 | 3 | 78 | 510 | 74 | 508 | 6.99e-93 | 295 |
| MS.gene058947.t1 | AT1G52260 | 32.943 | 513 | 319 | 8 | 3 | 510 | 18 | 510 | 5.32e-92 | 293 |
| MS.gene058947.t1 | AT1G21750 | 39.316 | 468 | 248 | 19 | 81 | 526 | 32 | 485 | 1.13e-85 | 275 |
| MS.gene058947.t1 | AT1G21750 | 38.961 | 462 | 251 | 17 | 81 | 524 | 32 | 480 | 7.11e-85 | 273 |
| MS.gene058947.t1 | AT1G77510 | 36.566 | 495 | 273 | 19 | 81 | 553 | 31 | 506 | 6.25e-79 | 258 |
| MS.gene058947.t1 | AT1G77510 | 42.478 | 113 | 63 | 2 | 73 | 183 | 367 | 479 | 1.05e-16 | 83.6 |
| MS.gene058947.t1 | AT2G47470 | 31.169 | 231 | 117 | 8 | 84 | 284 | 28 | 246 | 2.87e-21 | 94.4 |
| MS.gene058947.t1 | AT2G47470 | 34.054 | 185 | 109 | 5 | 320 | 502 | 55 | 228 | 5.85e-21 | 93.2 |
| MS.gene058947.t1 | AT2G47470 | 33.333 | 111 | 67 | 3 | 432 | 540 | 37 | 142 | 3.86e-13 | 70.5 |
| MS.gene058947.t1 | AT2G47470 | 34.054 | 185 | 109 | 5 | 320 | 502 | 55 | 228 | 7.85e-21 | 94.4 |
| MS.gene058947.t1 | AT2G47470 | 31.169 | 231 | 117 | 8 | 84 | 284 | 28 | 246 | 9.93e-21 | 94.0 |
| MS.gene058947.t1 | AT2G47470 | 34.579 | 107 | 63 | 3 | 436 | 540 | 41 | 142 | 5.03e-13 | 70.9 |
| MS.gene058947.t1 | AT2G47470 | 34.054 | 185 | 109 | 5 | 320 | 502 | 55 | 228 | 9.85e-21 | 94.0 |
| MS.gene058947.t1 | AT2G47470 | 31.169 | 231 | 117 | 8 | 84 | 284 | 28 | 246 | 1.03e-20 | 94.0 |
| MS.gene058947.t1 | AT2G47470 | 34.579 | 107 | 63 | 3 | 436 | 540 | 41 | 142 | 4.13e-13 | 71.2 |
| MS.gene058947.t1 | AT2G47470 | 34.054 | 185 | 109 | 5 | 320 | 502 | 55 | 228 | 1.27e-20 | 94.4 |
| MS.gene058947.t1 | AT2G47470 | 31.169 | 231 | 117 | 8 | 84 | 284 | 28 | 246 | 1.61e-20 | 94.0 |
| MS.gene058947.t1 | AT2G47470 | 35.714 | 98 | 59 | 2 | 436 | 531 | 41 | 136 | 4.52e-13 | 71.2 |
| MS.gene058947.t1 | AT1G35620 | 28.829 | 222 | 136 | 7 | 81 | 291 | 34 | 244 | 1.05e-18 | 89.4 |
| MS.gene058947.t1 | AT1G04980 | 29.018 | 224 | 133 | 9 | 82 | 283 | 170 | 389 | 1.84e-17 | 85.5 |
| MS.gene058947.t1 | AT1G04980 | 44.330 | 97 | 51 | 3 | 81 | 175 | 34 | 129 | 1.37e-16 | 82.8 |
| MS.gene058947.t1 | AT1G04980 | 27.700 | 213 | 133 | 6 | 320 | 520 | 65 | 268 | 8.04e-15 | 77.4 |
| MS.gene058947.t1 | AT2G32920 | 46.465 | 99 | 45 | 4 | 82 | 175 | 165 | 260 | 2.85e-17 | 85.1 |
| MS.gene058947.t1 | AT2G32920 | 42.308 | 104 | 57 | 3 | 81 | 182 | 32 | 134 | 1.50e-16 | 82.8 |
| MS.gene058947.t1 | AT2G32920 | 27.670 | 206 | 133 | 5 | 323 | 520 | 66 | 263 | 1.53e-13 | 73.2 |
| MS.gene058947.t1 | AT4G27080 | 32.283 | 127 | 68 | 3 | 79 | 188 | 141 | 266 | 3.84e-13 | 72.4 |
| MS.gene058947.t1 | AT4G27080 | 32.283 | 127 | 68 | 3 | 79 | 188 | 193 | 318 | 4.94e-13 | 72.0 |
Find 121 sgRNAs with CRISPR-Local
Find 223 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCAAATAGCTTACACTTTC+AGG | 0.073604 | 2.3:-7595253 | None:intergenic |
| TAGGAGTTGAGGCTGGTTTC+TGG | 0.153170 | 2.3:-7596063 | None:intergenic |
| GAAATTGCTCCCAGTATTTC+AGG | 0.203282 | 2.3:+7594343 | MS.gene058947:CDS |
| GAAGAAAAGCTCAACCATTT+TGG | 0.206003 | 2.3:+7593963 | MS.gene058947:CDS |
| ACATCAGAGCTCTCTGATTT+AGG | 0.211013 | 2.3:-7596082 | None:intergenic |
| GTCGCAGCGGCGGCATATTC+TGG | 0.211215 | 2.3:-7592663 | None:intergenic |
| TTCTGAGACCAAAGTTGTTT+TGG | 0.212145 | 2.3:+7593026 | MS.gene058947:CDS |
| TGCTCAGAAATTTGATGTTC+AGG | 0.255407 | 2.3:+7592746 | MS.gene058947:CDS |
| TAGCTTACACTTTCAGGAAT+TGG | 0.267348 | 2.3:-7595247 | None:intergenic |
| ATAATTACCTGTTTCTTGAT+TGG | 0.283200 | 2.3:-7594180 | None:intergenic |
| TTGAAAAGCTTTGCAACTTC+AGG | 0.285270 | 2.3:-7593891 | None:intergenic |
| TTTGATGCTTCCTGAAATAC+TGG | 0.295344 | 2.3:-7594353 | None:intergenic |
| GTTGCTACTTTGGTTCTCTT+TGG | 0.295651 | 2.3:-7596122 | None:intergenic |
| TATACATAACATTACTTCAT+TGG | 0.319759 | 2.3:+7592981 | MS.gene058947:CDS |
| GTGGTGGTTTCACCAGCTTC+TGG | 0.328568 | 2.3:-7592429 | None:intergenic |
| AGAAATTAAACAAACCAAAA+TGG | 0.339530 | 2.3:-7593977 | None:intergenic |
| CTGCTTGAGGAACTTGTAAA+AGG | 0.346354 | 2.3:-7596017 | None:intergenic |
| AGCTTACACTTTCAGGAATT+GGG | 0.357347 | 2.3:-7595246 | None:intergenic |
| GCTGGTTTCTGGAGCTTGAA+TGG | 0.364344 | 2.3:-7596052 | None:intergenic |
| GGTGACTATTGACAGAATTA+AGG | 0.380026 | 2.3:+7595033 | MS.gene058947:CDS |
| CTGGTTTCTGGAGCTTGAAT+GGG | 0.380359 | 2.3:-7596051 | None:intergenic |
| CTCCTCCAACAAGATTCCTT+TGG | 0.388801 | 2.3:+7594113 | MS.gene058947:CDS |
| AAGGATCAACGCAGGGCGTT+TGG | 0.389545 | 2.3:-7593928 | None:intergenic |
| TGAAAATCCAATCAAGAAAC+AGG | 0.402093 | 2.3:+7594173 | MS.gene058947:CDS |
| TGACATCGCTGTTGCTACTT+TGG | 0.410750 | 2.3:-7596132 | None:intergenic |
| TTTGCAAGCTTGTTGTATAT+CGG | 0.417814 | 2.3:-7595558 | None:intergenic |
| AGTTTCTGAATCTTCGTAAC+CGG | 0.422776 | 2.3:-7592505 | None:intergenic |
| CGCCGCTGCGACGGAATTGA+AGG | 0.429963 | 2.3:+7592674 | MS.gene058947:CDS |
| ATTTGGGTTTACCTTTGCCC+TGG | 0.431662 | 2.3:-7595643 | None:intergenic |
| ATACCGAAGTAATCTGAAAC+AGG | 0.440539 | 2.3:-7594814 | None:intergenic |
| GTGTGGCCATTGCCAACATT+TGG | 0.443950 | 2.3:+7595533 | MS.gene058947:CDS |
| TCAGATTACTTCGGTATTAG+TGG | 0.447352 | 2.3:+7594820 | MS.gene058947:CDS |
| TGTTACCAAAGGAATCTTGT+TGG | 0.449876 | 2.3:-7594118 | None:intergenic |
| GAGAAAACCCAAAACAACTT+TGG | 0.451359 | 2.3:-7593034 | None:intergenic |
| CAACTTCAGGATCCACAGTC+TGG | 0.454592 | 2.3:-7593878 | None:intergenic |
| GGAAGAAAATTTGTGTTTGA+AGG | 0.454888 | 2.3:+7595007 | MS.gene058947:CDS |
| GCAGCTAGCTCCTCACTCTC+AGG | 0.456501 | 2.3:-7593822 | None:intergenic |
| TCAATGAAGAAAAGAATAGT+AGG | 0.456548 | 2.3:-7592774 | None:intergenic |
| CGGAATCATCGCCGTGGTGG+TGG | 0.460227 | 2.3:-7592458 | None:intergenic |
| AGATGGAGGAGAAGAAGAGA+AGG | 0.463950 | 2.3:-7592350 | None:intergenic |
| GCTCAGAAATTTGATGTTCA+GGG | 0.464833 | 2.3:+7592747 | MS.gene058947:CDS |
| AGAGAAGGGTAGTGAGGGAA+AGG | 0.466754 | 2.3:-7592335 | None:intergenic |
| GGAAGCATCAAAGTCTTTCA+AGG | 0.466842 | 2.3:+7594364 | MS.gene058947:CDS |
| TTCGTCATCGAGTTCGTTTG+AGG | 0.471369 | 2.3:-7592385 | None:intergenic |
| GTGGTGGTGGTGTGTGGTGG+TGG | 0.471773 | 2.3:-7592445 | None:intergenic |
| GAGTTCGTTTGAGGAGAGAA+TGG | 0.472106 | 2.3:-7592376 | None:intergenic |
| AGAAGAAGAGAAGGGTAGTG+AGG | 0.473537 | 2.3:-7592341 | None:intergenic |
| TGTATATCGGTTCCAAATGT+TGG | 0.475373 | 2.3:-7595545 | None:intergenic |
| ATGTTCACTTTGCAGTCTGA+TGG | 0.480322 | 2.3:+7595769 | MS.gene058947:intron |
| GGAGAGAATGGGAGAGATGG+AGG | 0.481699 | 2.3:-7592364 | None:intergenic |
| TGAGGAGAGAATGGGAGAGA+TGG | 0.485377 | 2.3:-7592367 | None:intergenic |
| AAAATTTGTGTTTGAAGGAG+AGG | 0.487863 | 2.3:+7595012 | MS.gene058947:CDS |
| ACTCTTCTCTTCTTCCCAGC+AGG | 0.489317 | 2.3:+7595799 | MS.gene058947:CDS |
| TTTGGGTTTACCTTTGCCCT+GGG | 0.490545 | 2.3:-7595642 | None:intergenic |
| CTCTCTTGTAATAGCCAAGA+TGG | 0.503883 | 2.3:+7595599 | MS.gene058947:CDS |
| TTTCTTCCTCTTTCTTGACA+AGG | 0.508368 | 2.3:-7593947 | None:intergenic |
| GAAGAAGAGAAGGGTAGTGA+GGG | 0.508802 | 2.3:-7592340 | None:intergenic |
| TCTGATTTAGGAGTTGAGGC+TGG | 0.514207 | 2.3:-7596070 | None:intergenic |
| CAGATTACTTCGGTATTAGT+GGG | 0.514292 | 2.3:+7594821 | MS.gene058947:CDS |
| GAACACAAAATGAGCATCCC+AGG | 0.515907 | 2.3:+7595625 | MS.gene058947:CDS |
| ATCAAAGTCTTTCAAGGGAA+AGG | 0.517288 | 2.3:+7594370 | MS.gene058947:CDS |
| GGTGATGTGAAAATAGTTGT+TGG | 0.517934 | 2.3:+7595352 | MS.gene058947:CDS |
| ACCACCACACACCACCACCA+CGG | 0.523167 | 2.3:+7592447 | MS.gene058947:CDS |
| CTTCAATTCCGTCGCAGCGG+CGG | 0.523787 | 2.3:-7592673 | None:intergenic |
| GTCTTCTTCGAGATCGGCGT+CGG | 0.526121 | 2.3:-7592478 | None:intergenic |
| AGAATTCGACTAAAACGAAT+CGG | 0.526308 | 2.3:-7592605 | None:intergenic |
| AGTTCGTTTGAGGAGAGAAT+GGG | 0.532275 | 2.3:-7592375 | None:intergenic |
| TTAACTCGGCGACAGAATGA+TGG | 0.534871 | 2.3:+7595331 | MS.gene058947:intron |
| ACATGGATTAAGAAGAAGAC+TGG | 0.536124 | 2.3:+7592952 | MS.gene058947:CDS |
| AATATCAGATATATGCTCCT+TGG | 0.540524 | 2.3:+7595511 | MS.gene058947:intron |
| ATCAGAGAGCTCTGATGTCA+AGG | 0.545354 | 2.3:+7596087 | MS.gene058947:CDS |
| GCATACACCGGAAACGATGA+TGG | 0.546485 | 2.3:+7594986 | MS.gene058947:CDS |
| GCAGTTGATCTTTGTGCTTG+TGG | 0.546998 | 2.3:+7594765 | MS.gene058947:intron |
| TACCAAAGGAATCTTGTTGG+AGG | 0.552032 | 2.3:-7594115 | None:intergenic |
| GATGGAGGAGAAGAAGAGAA+GGG | 0.553609 | 2.3:-7592349 | None:intergenic |
| GAAACTGATAACGAAGATGT+TGG | 0.553749 | 2.3:+7594787 | MS.gene058947:CDS |
| AGAATATGCCGCCGCTGCGA+CGG | 0.557120 | 2.3:+7592665 | MS.gene058947:CDS |
| AGCAACTTCATTATCTTCAG+TGG | 0.558524 | 2.3:-7592727 | None:intergenic |
| GCTGGGAAGAAGAGAAGAGT+GGG | 0.561355 | 2.3:-7595796 | None:intergenic |
| AATTGTCTTGGATGAGTCAA+AGG | 0.563831 | 2.3:+7595390 | MS.gene058947:CDS |
| GCCGTGGTGGTGGTGTGTGG+TGG | 0.565946 | 2.3:-7592448 | None:intergenic |
| TTCCTCGACGAACCAGAAGC+TGG | 0.565959 | 2.3:+7592417 | MS.gene058947:CDS |
| GGAGAAGTCTTCTTCGAGAT+CGG | 0.567305 | 2.3:-7592484 | None:intergenic |
| GCTCTCTGATTTAGGAGTTG+AGG | 0.567708 | 2.3:-7596074 | None:intergenic |
| AGCTGCGGCTTCACGTCTTG+AGG | 0.570216 | 2.3:+7593839 | MS.gene058947:CDS |
| AAGCCTGTTTCAGATTACTT+CGG | 0.573742 | 2.3:+7594811 | MS.gene058947:CDS |
| GTTGATCCTTGTCAAGAAAG+AGG | 0.574493 | 2.3:+7593941 | MS.gene058947:CDS |
| TTCTTGACAAGGATCAACGC+AGG | 0.576510 | 2.3:-7593936 | None:intergenic |
| CAGATATATGCTCCTTGGTG+TGG | 0.578248 | 2.3:+7595516 | MS.gene058947:intron |
| GATCTCGAAGAAGACTTCTC+CGG | 0.588882 | 2.3:+7592486 | MS.gene058947:CDS |
| AAGTAGCAACAGCGATGTCA+AGG | 0.589607 | 2.3:+7596135 | MS.gene058947:CDS |
| TCGGTTCCAAATGTTGGCAA+TGG | 0.589689 | 2.3:-7595539 | None:intergenic |
| ATCGCCGTGGTGGTGGTGTG+TGG | 0.590102 | 2.3:-7592451 | None:intergenic |
| CACCAGCTTCTGGTTCGTCG+AGG | 0.592591 | 2.3:-7592419 | None:intergenic |
| GGATTGATGCATGCTGCTTG+AGG | 0.593443 | 2.3:-7596030 | None:intergenic |
| GGTGTTCATAAGAGTTACAC+TGG | 0.600709 | 2.3:+7592798 | MS.gene058947:CDS |
| AAATGAGCATCCCAGGGCAA+AGG | 0.601467 | 2.3:+7595632 | MS.gene058947:CDS |
| GTCAAAGGACGTTCTCCTTG+AGG | 0.604589 | 2.3:+7595405 | MS.gene058947:CDS |
| TATGTAGGGTCCTGAGAGTG+AGG | 0.607409 | 2.3:+7593812 | MS.gene058947:intron |
| GCCGCTGCGACGGAATTGAA+GGG | 0.607410 | 2.3:+7592675 | MS.gene058947:CDS |
| ATTAAGAAGAAGACTGGACC+TGG | 0.609346 | 2.3:+7592958 | MS.gene058947:CDS |
| GAAGTAATGTTATGTATACC+AGG | 0.613032 | 2.3:-7592976 | None:intergenic |
| ACCCTTCAATTCCGTCGCAG+CGG | 0.618790 | 2.3:-7592676 | None:intergenic |
| GTGTGGTCATTGTCAAGCAT+TGG | 0.618986 | 2.3:+7592638 | MS.gene058947:CDS |
| GAAGCATCAAAGTCTTTCAA+GGG | 0.619244 | 2.3:+7594365 | MS.gene058947:CDS |
| TGCTGGGAAGAAGAGAAGAG+TGG | 0.622841 | 2.3:-7595797 | None:intergenic |
| CGTCGGAATCATCGCCGTGG+TGG | 0.624569 | 2.3:-7592461 | None:intergenic |
| GAATTCTACGCACCATGGTG+TGG | 0.628556 | 2.3:+7592621 | MS.gene058947:CDS |
| CAAGAGAGTCAATACTGCGA+AGG | 0.629198 | 2.3:-7595584 | None:intergenic |
| TCTTGACAAGGATCAACGCA+GGG | 0.634558 | 2.3:-7593935 | None:intergenic |
| CTTGTAATAGCCAAGATGGA+CGG | 0.635238 | 2.3:+7595603 | MS.gene058947:CDS |
| TAGTCGAATTCTACGCACCA+TGG | 0.639660 | 2.3:+7592616 | MS.gene058947:CDS |
| TTGATGCTTCCTGAAATACT+GGG | 0.651591 | 2.3:-7594352 | None:intergenic |
| AACACAAAATGAGCATCCCA+GGG | 0.664470 | 2.3:+7595626 | MS.gene058947:CDS |
| TGTTGGCAATGGCCACACCA+AGG | 0.684405 | 2.3:-7595528 | None:intergenic |
| CGGCGTCGGAATCATCGCCG+TGG | 0.685072 | 2.3:-7592464 | None:intergenic |
| GCAGAGAAGCTATTGTGACA+TGG | 0.687793 | 2.3:+7592935 | MS.gene058947:intron |
| TGAGAGTGAGGAGCTAGCTG+CGG | 0.699295 | 2.3:+7593824 | MS.gene058947:CDS |
| ATGCAGGTACTTGCATACAC+CGG | 0.700002 | 2.3:+7594974 | MS.gene058947:intron |
| CTGGGAAGAAGAGAAGAGTG+GGG | 0.702683 | 2.3:-7595795 | None:intergenic |
| GCTTGACAATGACCACACCA+TGG | 0.739924 | 2.3:-7592633 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATGAGATTATATTATAATA+AGG | - | chr2.3:7594218-7594237 | None:intergenic | 10.0% |
| !! | TTATTATAATATAATCTCAT+TGG | + | chr2.3:7594217-7594236 | MS.gene058947:intron | 10.0% |
| !!! | GAAAAATAAATAATTACTTT+TGG | - | chr2.3:7594853-7594872 | None:intergenic | 10.0% |
| !!! | TTGAAATTTTATTCAATTTT+TGG | + | chr2.3:7592871-7592890 | MS.gene058947:intron | 10.0% |
| !! | ATCTTGTATTGTTAATTTAA+TGG | + | chr2.3:7595481-7595500 | MS.gene058947:intron | 15.0% |
| !! | AAATATAACTGGTAAAATAG+AGG | - | chr2.3:7595443-7595462 | None:intergenic | 20.0% |
| !! | AAGATTGATCAATAAGTTAT+TGG | - | chr2.3:7595743-7595762 | None:intergenic | 20.0% |
| !! | AATATAACTGGTAAAATAGA+GGG | - | chr2.3:7595442-7595461 | None:intergenic | 20.0% |
| !! | AGAAATTAAACAAACCAAAA+TGG | - | chr2.3:7593980-7593999 | None:intergenic | 20.0% |
| !! | AGTTAACAAAACATAATTGA+TGG | - | chr2.3:7595286-7595305 | None:intergenic | 20.0% |
| !! | TATACATAACATTACTTCAT+TGG | + | chr2.3:7592981-7593000 | MS.gene058947:CDS | 20.0% |
| !! | TGTATTGTTAATTTAATGGT+TGG | + | chr2.3:7595485-7595504 | MS.gene058947:intron | 20.0% |
| !!! | ATTACATCTTTTGAATAACT+TGG | + | chr2.3:7594920-7594939 | MS.gene058947:intron | 20.0% |
| !!! | TCAATTATGTTTTGTTAACT+TGG | + | chr2.3:7595286-7595305 | MS.gene058947:intron | 20.0% |
| ! | AAAGTGTAAGCTATTTGATT+TGG | + | chr2.3:7595257-7595276 | MS.gene058947:intron | 25.0% |
| ! | AAGGAAGAAAGTTTAATCTT+TGG | + | chr2.3:7593513-7593532 | MS.gene058947:intron | 25.0% |
| ! | ATTAGAGATGCAAATATAAC+TGG | - | chr2.3:7595454-7595473 | None:intergenic | 25.0% |
| ! | ATTAGCAAATCATAACGAAT+AGG | - | chr2.3:7593627-7593646 | None:intergenic | 25.0% |
| ! | ATTGCTTAATATTCACTTAC+AGG | - | chr2.3:7595841-7595860 | None:intergenic | 25.0% |
| ! | ATTGTTAATTTAATGGTTGG+TGG | + | chr2.3:7595488-7595507 | MS.gene058947:intron | 25.0% |
| ! | CCTCATTAAATGAAAGAAAA+AGG | - | chr2.3:7595125-7595144 | None:intergenic | 25.0% |
| ! | GTATCATCAAATTGAACAAA+GGG | - | chr2.3:7594875-7594894 | None:intergenic | 25.0% |
| ! | TCAATGAAGAAAAGAATAGT+AGG | - | chr2.3:7592777-7592796 | None:intergenic | 25.0% |
| ! | TGCATACAAATTTAAACCTT+CGG | + | chr2.3:7593561-7593580 | MS.gene058947:intron | 25.0% |
| !! | ACTATTCTTTTCTTCATTGA+TGG | + | chr2.3:7592777-7592796 | MS.gene058947:CDS | 25.0% |
| !! | ATAATTACCTGTTTCTTGAT+TGG | - | chr2.3:7594183-7594202 | None:intergenic | 25.0% |
| !! | ATTGGATTTTCAAAGATTGT+TGG | - | chr2.3:7594165-7594184 | None:intergenic | 25.0% |
| !! | CCTTTTTCTTTCATTTAATG+AGG | + | chr2.3:7595122-7595141 | MS.gene058947:intron | 25.0% |
| !! | TCAAATCTTCATTTTATCTC+AGG | + | chr2.3:7595171-7595190 | MS.gene058947:intron | 25.0% |
| !! | TGATTTTATAAACAGAAGCA+TGG | - | chr2.3:7594564-7594583 | None:intergenic | 25.0% |
| !!! | AATTTGTTTTTCGATGAAGT+TGG | + | chr2.3:7593700-7593719 | MS.gene058947:intron | 25.0% |
| !!! | ACTTTCATCTTGTCATTTTT+TGG | + | chr2.3:7594421-7594440 | MS.gene058947:intron | 25.0% |
| !!! | ATGTTTGAAACTTCTTTTTC+AGG | + | chr2.3:7594289-7594308 | MS.gene058947:intron | 25.0% |
| !!! | CAATTTTGATGAAATTGTCT+TGG | + | chr2.3:7595378-7595397 | MS.gene058947:CDS | 25.0% |
| !!! | CTTTCATCTTGTCATTTTTT+GGG | + | chr2.3:7594422-7594441 | MS.gene058947:intron | 25.0% |
| !!! | GGTTATATGTTGATTTTAAG+TGG | + | chr2.3:7593385-7593404 | MS.gene058947:intron | 25.0% |
| AAAATTTGTGTTTGAAGGAG+AGG | + | chr2.3:7595012-7595031 | MS.gene058947:CDS | 30.0% | |
| AAGTTATATGCTATGAAGCA+CGG | + | chr2.3:7593214-7593233 | MS.gene058947:intron | 30.0% | |
| AATATCAGATATATGCTCCT+TGG | + | chr2.3:7595511-7595530 | MS.gene058947:intron | 30.0% | |
| AGAATTCGACTAAAACGAAT+CGG | - | chr2.3:7592608-7592627 | None:intergenic | 30.0% | |
| ATCAAATAGCTTACACTTTC+AGG | - | chr2.3:7595256-7595275 | None:intergenic | 30.0% | |
| ATCAATAAGTTATTGGATGC+AGG | - | chr2.3:7595736-7595755 | None:intergenic | 30.0% | |
| ATCATACACATTCTGTAACA+TGG | - | chr2.3:7595100-7595119 | None:intergenic | 30.0% | |
| CGTATCATCAAATTGAACAA+AGG | - | chr2.3:7594876-7594895 | None:intergenic | 30.0% | |
| CTTGTAAAAACTGTTACCAA+AGG | - | chr2.3:7594132-7594151 | None:intergenic | 30.0% | |
| GAAAGTTTAATCTTTGGACT+TGG | + | chr2.3:7593519-7593538 | MS.gene058947:intron | 30.0% | |
| GAAGTAATGTTATGTATACC+AGG | - | chr2.3:7592979-7592998 | None:intergenic | 30.0% | |
| GAATGTAGTTAAATGTGTCT+TGG | + | chr2.3:7593289-7593308 | MS.gene058947:intron | 30.0% | |
| GGAAGAAAATTTGTGTTTGA+AGG | + | chr2.3:7595007-7595026 | MS.gene058947:CDS | 30.0% | |
| TGAAAATCCAATCAAGAAAC+AGG | + | chr2.3:7594173-7594192 | MS.gene058947:CDS | 30.0% | |
| ! | AGCAATGTCTAGTTTGAATT+TGG | - | chr2.3:7595663-7595682 | None:intergenic | 30.0% |
| ! | GCAATGTCTAGTTTGAATTT+GGG | - | chr2.3:7595662-7595681 | None:intergenic | 30.0% |
| ! | GTCTAACATGTTTGTTAACT+CGG | + | chr2.3:7595317-7595336 | MS.gene058947:intron | 30.0% |
| ! | TATCGAATTTTCCATCTGTA+AGG | - | chr2.3:7594071-7594090 | None:intergenic | 30.0% |
| ! | TCATTTTATCTCAGGCATTT+GGG | + | chr2.3:7595179-7595198 | MS.gene058947:intron | 30.0% |
| ! | TTCATTTTATCTCAGGCATT+TGG | + | chr2.3:7595178-7595197 | MS.gene058947:intron | 30.0% |
| !! | ATTCGTAGATGGATTATCTA+TGG | - | chr2.3:7593461-7593480 | None:intergenic | 30.0% |
| !! | TTTGCAAGCTTGTTGTATAT+CGG | - | chr2.3:7595561-7595580 | None:intergenic | 30.0% |
| AAGCCTGTTTCAGATTACTT+CGG | + | chr2.3:7594811-7594830 | MS.gene058947:CDS | 35.0% | |
| AATTGTCTTGGATGAGTCAA+AGG | + | chr2.3:7595390-7595409 | MS.gene058947:CDS | 35.0% | |
| AGCAAAACTAACAGAGTCTA+AGG | - | chr2.3:7595076-7595095 | None:intergenic | 35.0% | |
| AGCAACTTCATTATCTTCAG+TGG | - | chr2.3:7592730-7592749 | None:intergenic | 35.0% | |
| AGCTTACACTTTCAGGAATT+GGG | - | chr2.3:7595249-7595268 | None:intergenic | 35.0% | |
| AGTTTAATCTTTGGACTTGG+CGG | + | chr2.3:7593522-7593541 | MS.gene058947:intron | 35.0% | |
| AGTTTCTGAATCTTCGTAAC+CGG | - | chr2.3:7592508-7592527 | None:intergenic | 35.0% | |
| ATCAAAGTCTTTCAAGGGAA+AGG | + | chr2.3:7594370-7594389 | MS.gene058947:CDS | 35.0% | |
| CAAAAACATAAGCACCCTTT+AGG | - | chr2.3:7594710-7594729 | None:intergenic | 35.0% | |
| CAGATTACTTCGGTATTAGT+GGG | + | chr2.3:7594821-7594840 | MS.gene058947:CDS | 35.0% | |
| CCTGTTATGCACAATATGTA+GGG | + | chr2.3:7593798-7593817 | MS.gene058947:intron | 35.0% | |
| GAGAAAACCCAAAACAACTT+TGG | - | chr2.3:7593037-7593056 | None:intergenic | 35.0% | |
| GCTCAGAAATTTGATGTTCA+GGG | + | chr2.3:7592747-7592766 | MS.gene058947:CDS | 35.0% | |
| GGTGACTATTGACAGAATTA+AGG | + | chr2.3:7595033-7595052 | MS.gene058947:CDS | 35.0% | |
| GGTGATGTGAAAATAGTTGT+TGG | + | chr2.3:7595352-7595371 | MS.gene058947:CDS | 35.0% | |
| GTATTCTTGGAATTCGTAGA+TGG | - | chr2.3:7593472-7593491 | None:intergenic | 35.0% | |
| TAGCTTACACTTTCAGGAAT+TGG | - | chr2.3:7595250-7595269 | None:intergenic | 35.0% | |
| TCAGATTACTTCGGTATTAG+TGG | + | chr2.3:7594820-7594839 | MS.gene058947:CDS | 35.0% | |
| TCCTGTTATGCACAATATGT+AGG | + | chr2.3:7593797-7593816 | MS.gene058947:intron | 35.0% | |
| TCGATGAAGTTGGCAATTAA+AGG | + | chr2.3:7593710-7593729 | MS.gene058947:intron | 35.0% | |
| TGCTCAGAAATTTGATGTTC+AGG | + | chr2.3:7592746-7592765 | MS.gene058947:CDS | 35.0% | |
| TGTTACCAAAGGAATCTTGT+TGG | - | chr2.3:7594121-7594140 | None:intergenic | 35.0% | |
| TTGAAAAGCTTTGCAACTTC+AGG | - | chr2.3:7593894-7593913 | None:intergenic | 35.0% | |
| TTGATGCTTCCTGAAATACT+GGG | - | chr2.3:7594355-7594374 | None:intergenic | 35.0% | |
| TTTCTTCCTCTTTCTTGACA+AGG | - | chr2.3:7593950-7593969 | None:intergenic | 35.0% | |
| TTTGATGCTTCCTGAAATAC+TGG | - | chr2.3:7594356-7594375 | None:intergenic | 35.0% | |
| ! | ACATGGATTAAGAAGAAGAC+TGG | + | chr2.3:7592952-7592971 | MS.gene058947:CDS | 35.0% |
| ! | ACGTGTCATGGTGTTAATTA+AGG | + | chr2.3:7593494-7593513 | MS.gene058947:intron | 35.0% |
| ! | ATACCGAAGTAATCTGAAAC+AGG | - | chr2.3:7594817-7594836 | None:intergenic | 35.0% |
| ! | ATTGGGTCTGACTTGAAAAA+AGG | - | chr2.3:7595232-7595251 | None:intergenic | 35.0% |
| ! | ATTTTCCATCTGTAAGGACA+CGG | - | chr2.3:7594065-7594084 | None:intergenic | 35.0% |
| ! | CATTTTATCTCAGGCATTTG+GGG | + | chr2.3:7595180-7595199 | MS.gene058947:intron | 35.0% |
| ! | GAAACTGATAACGAAGATGT+TGG | + | chr2.3:7594787-7594806 | MS.gene058947:CDS | 35.0% |
| ! | GAAGAAAAGCTCAACCATTT+TGG | + | chr2.3:7593963-7593982 | MS.gene058947:CDS | 35.0% |
| ! | GAAGCATCAAAGTCTTTCAA+GGG | + | chr2.3:7594365-7594384 | MS.gene058947:CDS | 35.0% |
| ! | TGTCAATTTTTACCAGACTG+TGG | + | chr2.3:7593866-7593885 | MS.gene058947:CDS | 35.0% |
| ! | TTTTCTTCCATCATCGTTTC+CGG | - | chr2.3:7594996-7595015 | None:intergenic | 35.0% |
| !! | AGAAGTGTAGCTTTGTTTCT+TGG | + | chr2.3:7593186-7593205 | MS.gene058947:intron | 35.0% |
| !! | CAAAACTTTTGTTTCCTGCT+GGG | - | chr2.3:7595816-7595835 | None:intergenic | 35.0% |
| !! | TCAAAACTTTTGTTTCCTGC+TGG | - | chr2.3:7595817-7595836 | None:intergenic | 35.0% |
| !! | TCTGAGACCAAAGTTGTTTT+GGG | + | chr2.3:7593027-7593046 | MS.gene058947:CDS | 35.0% |
| !! | TGTATATCGGTTCCAAATGT+TGG | - | chr2.3:7595548-7595567 | None:intergenic | 35.0% |
| !!! | AAGGTTTTAGCTTGTCTTCA+AGG | - | chr2.3:7595213-7595232 | None:intergenic | 35.0% |
| !!! | TAAACCTTCGGTGTTTTCAT+GGG | + | chr2.3:7593573-7593592 | MS.gene058947:intron | 35.0% |
| !!! | TTAAACCTTCGGTGTTTTCA+TGG | + | chr2.3:7593572-7593591 | MS.gene058947:intron | 35.0% |
| !!! | TTCTGAGACCAAAGTTGTTT+TGG | + | chr2.3:7593026-7593045 | MS.gene058947:CDS | 35.0% |
| AAACATAAGCACCCTTTAGG+AGG | - | chr2.3:7594707-7594726 | None:intergenic | 40.0% | |
| AACACAAAATGAGCATCCCA+GGG | + | chr2.3:7595626-7595645 | MS.gene058947:CDS | 40.0% | |
| ACATCAGAGCTCTCTGATTT+AGG | - | chr2.3:7596085-7596104 | None:intergenic | 40.0% | |
| ACCAGTTGAATTTCCAATGC+AGG | + | chr2.3:7594958-7594977 | MS.gene058947:intron | 40.0% | |
| ACCTGCATTGGAAATTCAAC+TGG | - | chr2.3:7594962-7594981 | None:intergenic | 40.0% | |
| AGCACAAAGATCAACTGCAA+TGG | - | chr2.3:7594763-7594782 | None:intergenic | 40.0% | |
| AGGTGTAGTGTACTTCTTAG+TGG | + | chr2.3:7594512-7594531 | MS.gene058947:intron | 40.0% | |
| AGTTCGTTTGAGGAGAGAAT+GGG | - | chr2.3:7592378-7592397 | None:intergenic | 40.0% | |
| ATGTTCACTTTGCAGTCTGA+TGG | + | chr2.3:7595769-7595788 | MS.gene058947:intron | 40.0% | |
| ATTAAGAAGAAGACTGGACC+TGG | + | chr2.3:7592958-7592977 | MS.gene058947:CDS | 40.0% | |
| CCAAGAATACTAACGTGTCA+TGG | + | chr2.3:7593482-7593501 | MS.gene058947:intron | 40.0% | |
| CCATGACACGTTAGTATTCT+TGG | - | chr2.3:7593485-7593504 | None:intergenic | 40.0% | |
| CCCTACATATTGTGCATAAC+AGG | - | chr2.3:7593801-7593820 | None:intergenic | 40.0% | |
| CTCTCTTGTAATAGCCAAGA+TGG | + | chr2.3:7595599-7595618 | MS.gene058947:CDS | 40.0% | |
| CTGAATTCTTGTCGAAAGCA+AGG | - | chr2.3:7594494-7594513 | None:intergenic | 40.0% | |
| CTGCTTGAGGAACTTGTAAA+AGG | - | chr2.3:7596020-7596039 | None:intergenic | 40.0% | |
| CTTGCTTTCGACAAGAATTC+AGG | + | chr2.3:7594492-7594511 | MS.gene058947:intron | 40.0% | |
| CTTGTAATAGCCAAGATGGA+CGG | + | chr2.3:7595603-7595622 | MS.gene058947:CDS | 40.0% | |
| GAAATTGCTCCCAGTATTTC+AGG | + | chr2.3:7594343-7594362 | MS.gene058947:CDS | 40.0% | |
| GGTGTAGTGTACTTCTTAGT+GGG | + | chr2.3:7594513-7594532 | MS.gene058947:intron | 40.0% | |
| GGTGTTCATAAGAGTTACAC+TGG | + | chr2.3:7592798-7592817 | MS.gene058947:CDS | 40.0% | |
| GTTGATCCTTGTCAAGAAAG+AGG | + | chr2.3:7593941-7593960 | MS.gene058947:CDS | 40.0% | |
| TACCAAAGGAATCTTGTTGG+AGG | - | chr2.3:7594118-7594137 | None:intergenic | 40.0% | |
| ! | AACTAACAGAGTCTAAGGCA+AGG | - | chr2.3:7595071-7595090 | None:intergenic | 40.0% |
| ! | ACTAACAGAGTCTAAGGCAA+GGG | - | chr2.3:7595070-7595089 | None:intergenic | 40.0% |
| ! | ATTTTGTGTTCCGTCCATCT+TGG | - | chr2.3:7595616-7595635 | None:intergenic | 40.0% |
| !! | GGAAGCATCAAAGTCTTTCA+AGG | + | chr2.3:7594364-7594383 | MS.gene058947:CDS | 40.0% |
| !! | GTTGCTACTTTGGTTCTCTT+TGG | - | chr2.3:7596125-7596144 | None:intergenic | 40.0% |
| AAGTAGCAACAGCGATGTCA+AGG | + | chr2.3:7596135-7596154 | MS.gene058947:CDS | 45.0% | |
| AGAAGAAGAGAAGGGTAGTG+AGG | - | chr2.3:7592344-7592363 | None:intergenic | 45.0% | |
| AGATGGAGGAGAAGAAGAGA+AGG | - | chr2.3:7592353-7592372 | None:intergenic | 45.0% | |
| AGGGTCAAAGTTGTACCTCA+AGG | - | chr2.3:7595423-7595442 | None:intergenic | 45.0% | |
| ATCCAGCTCTTCCTCCTAAA+GGG | + | chr2.3:7594693-7594712 | MS.gene058947:intron | 45.0% | |
| ATGCAGGTACTTGCATACAC+CGG | + | chr2.3:7594974-7594993 | MS.gene058947:intron | 45.0% | |
| CAAGAGAGTCAATACTGCGA+AGG | - | chr2.3:7595587-7595606 | None:intergenic | 45.0% | |
| CAGATATATGCTCCTTGGTG+TGG | + | chr2.3:7595516-7595535 | MS.gene058947:intron | 45.0% | |
| CTCCTCCAACAAGATTCCTT+TGG | + | chr2.3:7594113-7594132 | MS.gene058947:CDS | 45.0% | |
| GAACACAAAATGAGCATCCC+AGG | + | chr2.3:7595625-7595644 | MS.gene058947:CDS | 45.0% | |
| GAAGAAGAGAAGGGTAGTGA+GGG | - | chr2.3:7592343-7592362 | None:intergenic | 45.0% | |
| GAGTTCGTTTGAGGAGAGAA+TGG | - | chr2.3:7592379-7592398 | None:intergenic | 45.0% | |
| GATCTCGAAGAAGACTTCTC+CGG | + | chr2.3:7592486-7592505 | MS.gene058947:CDS | 45.0% | |
| GATGGAGGAGAAGAAGAGAA+GGG | - | chr2.3:7592352-7592371 | None:intergenic | 45.0% | |
| GCAGAGAAGCTATTGTGACA+TGG | + | chr2.3:7592935-7592954 | MS.gene058947:intron | 45.0% | |
| GCAGTTGATCTTTGTGCTTG+TGG | + | chr2.3:7594765-7594784 | MS.gene058947:intron | 45.0% | |
| GCTCTCTGATTTAGGAGTTG+AGG | - | chr2.3:7596077-7596096 | None:intergenic | 45.0% | |
| GGAGAAGTCTTCTTCGAGAT+CGG | - | chr2.3:7592487-7592506 | None:intergenic | 45.0% | |
| GTGTATGCAAGTACCTGCAT+TGG | - | chr2.3:7594974-7594993 | None:intergenic | 45.0% | |
| GTGTGGTCATTGTCAAGCAT+TGG | + | chr2.3:7592638-7592657 | MS.gene058947:CDS | 45.0% | |
| TAGTCGAATTCTACGCACCA+TGG | + | chr2.3:7592616-7592635 | MS.gene058947:CDS | 45.0% | |
| TCAACCCATGAAAACACCGA+AGG | - | chr2.3:7593580-7593599 | None:intergenic | 45.0% | |
| TCGGTTCCAAATGTTGGCAA+TGG | - | chr2.3:7595542-7595561 | None:intergenic | 45.0% | |
| TCTGATTTAGGAGTTGAGGC+TGG | - | chr2.3:7596073-7596092 | None:intergenic | 45.0% | |
| TCTTGACAAGGATCAACGCA+GGG | - | chr2.3:7593938-7593957 | None:intergenic | 45.0% | |
| TTAACTCGGCGACAGAATGA+TGG | + | chr2.3:7595331-7595350 | MS.gene058947:intron | 45.0% | |
| TTCGTCATCGAGTTCGTTTG+AGG | - | chr2.3:7592388-7592407 | None:intergenic | 45.0% | |
| TTCTTGACAAGGATCAACGC+AGG | - | chr2.3:7593939-7593958 | None:intergenic | 45.0% | |
| ! | ACGCATTCGAACAGAAGTGT+CGG | + | chr2.3:7593353-7593372 | MS.gene058947:intron | 45.0% |
| ! | ATCAGAGAGCTCTGATGTCA+AGG | + | chr2.3:7596087-7596106 | MS.gene058947:CDS | 45.0% |
| ! | ATTTGGGTTTACCTTTGCCC+TGG | - | chr2.3:7595646-7595665 | None:intergenic | 45.0% |
| ! | TGACATCGCTGTTGCTACTT+TGG | - | chr2.3:7596135-7596154 | None:intergenic | 45.0% |
| ! | TTCATGGGTTGACTCTTGTG+TGG | + | chr2.3:7593588-7593607 | MS.gene058947:intron | 45.0% |
| ! | TTTGGGTTTACCTTTGCCCT+GGG | - | chr2.3:7595645-7595664 | None:intergenic | 45.0% |
| !! | ACGTCTTTTTCGTCGAACTC+AGG | - | chr2.3:7592540-7592559 | None:intergenic | 45.0% |
| !! | CGTCTTTTTCGTCGAACTCA+GGG | - | chr2.3:7592539-7592558 | None:intergenic | 45.0% |
| !! | CTGGTTTCTGGAGCTTGAAT+GGG | - | chr2.3:7596054-7596073 | None:intergenic | 45.0% |
| !! | GTCTTTTTCGTCGAACTCAG+GGG | - | chr2.3:7592538-7592557 | None:intergenic | 45.0% |
| !! | TCTTTTTCGTCGAACTCAGG+GGG | - | chr2.3:7592537-7592556 | None:intergenic | 45.0% |
| !! | TGACACTGACTCATCGACAT+TGG | + | chr2.3:7593240-7593259 | MS.gene058947:intron | 45.0% |
| AAATGAGCATCCCAGGGCAA+AGG | + | chr2.3:7595632-7595651 | MS.gene058947:CDS | 50.0% | |
| ACTCTTCTCTTCTTCCCAGC+AGG | + | chr2.3:7595799-7595818 | MS.gene058947:CDS | 50.0% | |
| AGAGAAGGGTAGTGAGGGAA+AGG | - | chr2.3:7592338-7592357 | None:intergenic | 50.0% | |
| AGATCACTCTCGCACACACA+TGG | - | chr2.3:7595910-7595929 | None:intergenic | 50.0% | |
| CAACTTCAGGATCCACAGTC+TGG | - | chr2.3:7593881-7593900 | None:intergenic | 50.0% | |
| CTGGGAAGAAGAGAAGAGTG+GGG | - | chr2.3:7595798-7595817 | None:intergenic | 50.0% | |
| GAATTCTACGCACCATGGTG+TGG | + | chr2.3:7592621-7592640 | MS.gene058947:CDS | 50.0% | |
| GATCACTCTCGCACACACAT+GGG | - | chr2.3:7595909-7595928 | None:intergenic | 50.0% | |
| GATCCAGCTCTTCCTCCTAA+AGG | + | chr2.3:7594692-7594711 | MS.gene058947:intron | 50.0% | |
| GCATACACCGGAAACGATGA+TGG | + | chr2.3:7594986-7595005 | MS.gene058947:CDS | 50.0% | |
| GCTGGGAAGAAGAGAAGAGT+GGG | - | chr2.3:7595799-7595818 | None:intergenic | 50.0% | |
| GCTTGACAATGACCACACCA+TGG | - | chr2.3:7592636-7592655 | None:intergenic | 50.0% | |
| GTCAAAGGACGTTCTCCTTG+AGG | + | chr2.3:7595405-7595424 | MS.gene058947:CDS | 50.0% | |
| GTGTGGCCATTGCCAACATT+TGG | + | chr2.3:7595533-7595552 | MS.gene058947:CDS | 50.0% | |
| GTTCACCGTGTCCTTACAGA+TGG | + | chr2.3:7594057-7594076 | MS.gene058947:intron | 50.0% | |
| TATGTAGGGTCCTGAGAGTG+AGG | + | chr2.3:7593812-7593831 | MS.gene058947:intron | 50.0% | |
| TGAGGAGAGAATGGGAGAGA+TGG | - | chr2.3:7592370-7592389 | None:intergenic | 50.0% | |
| TGCTGGGAAGAAGAGAAGAG+TGG | - | chr2.3:7595800-7595819 | None:intergenic | 50.0% | |
| TGTCACTGTCGACACTGACA+CGG | - | chr2.3:7593323-7593342 | None:intergenic | 50.0% | |
| TTTGGACTTGGCGGAATTCG+TGG | + | chr2.3:7593531-7593550 | MS.gene058947:intron | 50.0% | |
| ! | GGATTGATGCATGCTGCTTG+AGG | - | chr2.3:7596033-7596052 | None:intergenic | 50.0% |
| ! | GTGTCGACAGTGACACATGT+TGG | + | chr2.3:7593328-7593347 | MS.gene058947:intron | 50.0% |
| !! | CAGAAGTGTCGGTGCTACAA+AGG | + | chr2.3:7593364-7593383 | MS.gene058947:intron | 50.0% |
| !! | GCTGGTTTCTGGAGCTTGAA+TGG | - | chr2.3:7596055-7596074 | None:intergenic | 50.0% |
| !! | TAGGAGTTGAGGCTGGTTTC+TGG | - | chr2.3:7596066-7596085 | None:intergenic | 50.0% |
| ACCCTTCAATTCCGTCGCAG+CGG | - | chr2.3:7592679-7592698 | None:intergenic | 55.0% | |
| GACTTGGCGGAATTCGTGGT+TGG | + | chr2.3:7593535-7593554 | MS.gene058947:intron | 55.0% | |
| GGAGAGAATGGGAGAGATGG+AGG | - | chr2.3:7592367-7592386 | None:intergenic | 55.0% | |
| GTCTTCTTCGAGATCGGCGT+CGG | - | chr2.3:7592481-7592500 | None:intergenic | 55.0% | |
| GTGGTGGTTTCACCAGCTTC+TGG | - | chr2.3:7592432-7592451 | None:intergenic | 55.0% | |
| TGAGAGTGAGGAGCTAGCTG+CGG | + | chr2.3:7593824-7593843 | MS.gene058947:CDS | 55.0% | |
| TGTTGGCAATGGCCACACCA+AGG | - | chr2.3:7595531-7595550 | None:intergenic | 55.0% | |
| TTCCTCGACGAACCAGAAGC+TGG | + | chr2.3:7592417-7592436 | MS.gene058947:CDS | 55.0% | |
| TTTCGTCGAACTCAGGGGGT+TGG | - | chr2.3:7592533-7592552 | None:intergenic | 55.0% | |
| ! | AAGGATCAACGCAGGGCGTT+TGG | - | chr2.3:7593931-7593950 | None:intergenic | 55.0% |
| ! | CACCCTTTAGGAGGAAGAGC+TGG | - | chr2.3:7594698-7594717 | None:intergenic | 55.0% |
| ACCACCACACACCACCACCA+CGG | + | chr2.3:7592447-7592466 | MS.gene058947:CDS | 60.0% | |
| AGAATATGCCGCCGCTGCGA+CGG | + | chr2.3:7592665-7592684 | MS.gene058947:CDS | 60.0% | |
| AGCTGCGGCTTCACGTCTTG+AGG | + | chr2.3:7593839-7593858 | MS.gene058947:CDS | 60.0% | |
| CTTCAATTCCGTCGCAGCGG+CGG | - | chr2.3:7592676-7592695 | None:intergenic | 60.0% | |
| GCAGCTAGCTCCTCACTCTC+AGG | - | chr2.3:7593825-7593844 | None:intergenic | 60.0% | |
| GCCGCTGCGACGGAATTGAA+GGG | + | chr2.3:7592675-7592694 | MS.gene058947:CDS | 60.0% | |
| !! | CACCAGCTTCTGGTTCGTCG+AGG | - | chr2.3:7592422-7592441 | None:intergenic | 60.0% |
| CGCCGCTGCGACGGAATTGA+AGG | + | chr2.3:7592674-7592693 | MS.gene058947:CDS | 65.0% | |
| CGGAATCATCGCCGTGGTGG+TGG | - | chr2.3:7592461-7592480 | None:intergenic | 65.0% | |
| CGTCGGAATCATCGCCGTGG+TGG | - | chr2.3:7592464-7592483 | None:intergenic | 65.0% | |
| GTCGCAGCGGCGGCATATTC+TGG | - | chr2.3:7592666-7592685 | None:intergenic | 65.0% | |
| !! | ATCGCCGTGGTGGTGGTGTG+TGG | - | chr2.3:7592454-7592473 | None:intergenic | 65.0% |
| !! | GTGGTGGTGGTGTGTGGTGG+TGG | - | chr2.3:7592448-7592467 | None:intergenic | 65.0% |
| ! | CGGCGTCGGAATCATCGCCG+TGG | - | chr2.3:7592467-7592486 | None:intergenic | 70.0% |
| !! | GCCGTGGTGGTGGTGTGTGG+TGG | - | chr2.3:7592451-7592470 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.3 | gene | 7592318 | 7596168 | 7592318 | ID=MS.gene058947 |
| chr2.3 | mRNA | 7592318 | 7596168 | 7592318 | ID=MS.gene058947.t1;Parent=MS.gene058947 |
| chr2.3 | exon | 7592318 | 7592832 | 7592318 | ID=MS.gene058947.t1.exon1;Parent=MS.gene058947.t1 |
| chr2.3 | CDS | 7592318 | 7592832 | 7592318 | ID=cds.MS.gene058947.t1;Parent=MS.gene058947.t1 |
| chr2.3 | exon | 7592939 | 7593068 | 7592939 | ID=MS.gene058947.t1.exon2;Parent=MS.gene058947.t1 |
| chr2.3 | CDS | 7592939 | 7593068 | 7592939 | ID=cds.MS.gene058947.t1;Parent=MS.gene058947.t1 |
| chr2.3 | exon | 7593819 | 7593984 | 7593819 | ID=MS.gene058947.t1.exon3;Parent=MS.gene058947.t1 |
| chr2.3 | CDS | 7593819 | 7593984 | 7593819 | ID=cds.MS.gene058947.t1;Parent=MS.gene058947.t1 |
| chr2.3 | exon | 7594076 | 7594194 | 7594076 | ID=MS.gene058947.t1.exon4;Parent=MS.gene058947.t1 |
| chr2.3 | CDS | 7594076 | 7594194 | 7594076 | ID=cds.MS.gene058947.t1;Parent=MS.gene058947.t1 |
| chr2.3 | exon | 7594311 | 7594391 | 7594311 | ID=MS.gene058947.t1.exon5;Parent=MS.gene058947.t1 |
| chr2.3 | CDS | 7594311 | 7594391 | 7594311 | ID=cds.MS.gene058947.t1;Parent=MS.gene058947.t1 |
| chr2.3 | exon | 7594769 | 7594855 | 7594769 | ID=MS.gene058947.t1.exon6;Parent=MS.gene058947.t1 |
| chr2.3 | CDS | 7594769 | 7594855 | 7594769 | ID=cds.MS.gene058947.t1;Parent=MS.gene058947.t1 |
| chr2.3 | exon | 7594980 | 7595054 | 7594980 | ID=MS.gene058947.t1.exon7;Parent=MS.gene058947.t1 |
| chr2.3 | CDS | 7594980 | 7595054 | 7594980 | ID=cds.MS.gene058947.t1;Parent=MS.gene058947.t1 |
| chr2.3 | exon | 7595193 | 7595261 | 7595193 | ID=MS.gene058947.t1.exon8;Parent=MS.gene058947.t1 |
| chr2.3 | CDS | 7595193 | 7595261 | 7595193 | ID=cds.MS.gene058947.t1;Parent=MS.gene058947.t1 |
| chr2.3 | exon | 7595346 | 7595426 | 7595346 | ID=MS.gene058947.t1.exon9;Parent=MS.gene058947.t1 |
| chr2.3 | CDS | 7595346 | 7595426 | 7595346 | ID=cds.MS.gene058947.t1;Parent=MS.gene058947.t1 |
| chr2.3 | exon | 7595519 | 7595653 | 7595519 | ID=MS.gene058947.t1.exon10;Parent=MS.gene058947.t1 |
| chr2.3 | CDS | 7595519 | 7595653 | 7595519 | ID=cds.MS.gene058947.t1;Parent=MS.gene058947.t1 |
| chr2.3 | exon | 7595784 | 7595840 | 7595784 | ID=MS.gene058947.t1.exon11;Parent=MS.gene058947.t1 |
| chr2.3 | CDS | 7595784 | 7595840 | 7595784 | ID=cds.MS.gene058947.t1;Parent=MS.gene058947.t1 |
| chr2.3 | exon | 7595986 | 7596168 | 7595986 | ID=MS.gene058947.t1.exon12;Parent=MS.gene058947.t1 |
| chr2.3 | CDS | 7595986 | 7596168 | 7595986 | ID=cds.MS.gene058947.t1;Parent=MS.gene058947.t1 |
| Gene Sequence |
| Protein sequence |