Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene02412.t1 | XP_003612078.1 | 97.3 | 331 | 9 | 0 | 1 | 331 | 1 | 331 | 6.30E-181 | 643.3 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene02412.t1 | Q9FJZ9 | 75.1 | 334 | 80 | 2 | 1 | 331 | 1 | 334 | 9.0e-144 | 511.1 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene02412.t1 | G7KF17 | 97.3 | 331 | 9 | 0 | 1 | 331 | 1 | 331 | 4.5e-181 | 643.3 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene02412 | MS.gene068826 | PPI |
MS.gene02412 | MS.gene78768 | PPI |
MS.gene053958 | MS.gene02412 | PPI |
MS.gene02412 | MS.gene059685 | PPI |
MS.gene02412 | MS.gene068824 | PPI |
MS.gene068822 | MS.gene02412 | PPI |
MS.gene02412 | MS.gene21483 | PPI |
MS.gene02412 | MS.gene09669 | PPI |
MS.gene02412 | MS.gene015325 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene02412.t1 | MTR_5g021060 | 97.281 | 331 | 9 | 0 | 1 | 331 | 1 | 331 | 0.0 | 663 |
MS.gene02412.t1 | MTR_8g076820 | 83.228 | 316 | 53 | 0 | 15 | 330 | 15 | 330 | 0.0 | 558 |
MS.gene02412.t1 | MTR_1g022970 | 61.921 | 302 | 114 | 1 | 30 | 330 | 46 | 347 | 3.53e-131 | 378 |
MS.gene02412.t1 | MTR_4g029170 | 53.681 | 326 | 138 | 5 | 7 | 330 | 7 | 321 | 1.51e-113 | 332 |
MS.gene02412.t1 | MTR_7g093370 | 50.613 | 326 | 155 | 3 | 7 | 330 | 50 | 371 | 3.98e-113 | 333 |
MS.gene02412.t1 | MTR_5g083860 | 50.765 | 327 | 147 | 4 | 6 | 330 | 11 | 325 | 4.97e-113 | 331 |
MS.gene02412.t1 | MTR_5g014100 | 54.072 | 307 | 134 | 3 | 30 | 330 | 26 | 331 | 1.21e-112 | 330 |
MS.gene02412.t1 | MTR_2g084000 | 50.464 | 323 | 146 | 2 | 8 | 330 | 11 | 319 | 6.42e-112 | 328 |
MS.gene02412.t1 | MTR_2g084020 | 50.464 | 323 | 145 | 2 | 8 | 330 | 11 | 318 | 3.55e-111 | 326 |
MS.gene02412.t1 | MTR_2g029830 | 52.459 | 305 | 144 | 1 | 27 | 330 | 25 | 329 | 1.10e-110 | 326 |
MS.gene02412.t1 | MTR_3g072190 | 52.778 | 324 | 143 | 3 | 7 | 330 | 5 | 318 | 2.42e-110 | 324 |
MS.gene02412.t1 | MTR_2g084080 | 49.691 | 324 | 153 | 3 | 7 | 330 | 4 | 317 | 2.50e-110 | 323 |
MS.gene02412.t1 | MTR_2g084010 | 51.475 | 305 | 141 | 1 | 26 | 330 | 21 | 318 | 3.95e-110 | 323 |
MS.gene02412.t1 | MTR_2g029800 | 51.961 | 306 | 146 | 1 | 27 | 331 | 26 | 331 | 1.33e-109 | 323 |
MS.gene02412.t1 | MTR_2g029820 | 52.288 | 306 | 145 | 1 | 27 | 331 | 26 | 331 | 4.26e-109 | 322 |
MS.gene02412.t1 | MTR_2g029740 | 52.131 | 305 | 145 | 1 | 27 | 330 | 26 | 330 | 9.12e-109 | 321 |
MS.gene02412.t1 | MTR_1g054205 | 48.193 | 332 | 163 | 3 | 1 | 330 | 2 | 326 | 2.58e-108 | 319 |
MS.gene02412.t1 | MTR_2g029560 | 50.980 | 306 | 147 | 2 | 28 | 330 | 20 | 325 | 9.48e-108 | 318 |
MS.gene02412.t1 | MTR_2g028980 | 50.637 | 314 | 149 | 2 | 18 | 330 | 22 | 330 | 2.47e-107 | 317 |
MS.gene02412.t1 | MTR_2g029730 | 51.307 | 306 | 146 | 2 | 28 | 330 | 21 | 326 | 4.70e-107 | 316 |
MS.gene02412.t1 | MTR_3g094650 | 48.615 | 325 | 154 | 4 | 8 | 330 | 9 | 322 | 6.34e-107 | 315 |
MS.gene02412.t1 | MTR_3g466200 | 51.316 | 304 | 137 | 4 | 30 | 330 | 25 | 320 | 7.22e-107 | 315 |
MS.gene02412.t1 | MTR_4g029180 | 54.849 | 299 | 125 | 4 | 34 | 330 | 31 | 321 | 9.18e-107 | 315 |
MS.gene02412.t1 | MTR_2g040000 | 52.288 | 306 | 140 | 2 | 30 | 331 | 29 | 332 | 9.63e-107 | 315 |
MS.gene02412.t1 | MTR_2g029815 | 51.475 | 305 | 147 | 1 | 27 | 330 | 26 | 330 | 1.07e-106 | 316 |
MS.gene02412.t1 | MTR_2g084110 | 49.383 | 324 | 154 | 3 | 7 | 330 | 4 | 317 | 2.97e-106 | 313 |
MS.gene02412.t1 | MTR_2g029750 | 50.820 | 305 | 149 | 1 | 27 | 330 | 26 | 330 | 2.05e-105 | 312 |
MS.gene02412.t1 | MTR_5g074970 | 50.909 | 330 | 142 | 6 | 8 | 330 | 10 | 326 | 5.35e-105 | 310 |
MS.gene02412.t1 | MTR_4g125940 | 49.550 | 333 | 161 | 3 | 1 | 330 | 1 | 329 | 8.64e-105 | 310 |
MS.gene02412.t1 | MTR_2g084090 | 48.916 | 323 | 153 | 5 | 9 | 330 | 7 | 318 | 2.25e-104 | 308 |
MS.gene02412.t1 | MTR_4g122640 | 50.331 | 302 | 146 | 2 | 30 | 330 | 38 | 336 | 2.62e-104 | 309 |
MS.gene02412.t1 | MTR_3g094670 | 49.538 | 325 | 146 | 4 | 8 | 330 | 14 | 322 | 6.00e-104 | 308 |
MS.gene02412.t1 | MTR_4g083710 | 46.246 | 333 | 164 | 3 | 1 | 330 | 4 | 324 | 6.40e-104 | 308 |
MS.gene02412.t1 | MTR_7g072510 | 49.180 | 305 | 147 | 2 | 26 | 330 | 16 | 312 | 6.66e-104 | 307 |
MS.gene02412.t1 | MTR_5g074760 | 52.787 | 305 | 132 | 5 | 30 | 330 | 25 | 321 | 1.60e-103 | 306 |
MS.gene02412.t1 | MTR_5g017850 | 50.462 | 325 | 152 | 4 | 7 | 330 | 10 | 326 | 2.67e-103 | 306 |
MS.gene02412.t1 | MTR_5g074860 | 50.814 | 307 | 139 | 5 | 27 | 329 | 26 | 324 | 1.12e-102 | 305 |
MS.gene02412.t1 | MTR_2g029860 | 47.678 | 323 | 162 | 2 | 9 | 330 | 14 | 330 | 2.26e-102 | 305 |
MS.gene02412.t1 | MTR_3g094630 | 49.691 | 324 | 146 | 4 | 9 | 330 | 14 | 322 | 4.10e-102 | 303 |
MS.gene02412.t1 | MTR_5g074740 | 52.459 | 305 | 133 | 5 | 30 | 330 | 25 | 321 | 4.72e-102 | 303 |
MS.gene02412.t1 | MTR_7g072480 | 47.147 | 333 | 151 | 4 | 2 | 330 | 5 | 316 | 5.20e-100 | 297 |
MS.gene02412.t1 | MTR_5g017860 | 49.231 | 325 | 156 | 4 | 7 | 330 | 10 | 326 | 6.47e-100 | 297 |
MS.gene02412.t1 | MTR_5g074710 | 51.475 | 305 | 136 | 5 | 30 | 330 | 25 | 321 | 1.00e-99 | 297 |
MS.gene02412.t1 | MTR_2g029850 | 50.336 | 298 | 147 | 1 | 34 | 330 | 33 | 330 | 2.16e-99 | 297 |
MS.gene02412.t1 | MTR_7g026990 | 49.834 | 301 | 134 | 4 | 34 | 330 | 35 | 322 | 3.46e-99 | 295 |
MS.gene02412.t1 | MTR_5g049280 | 47.508 | 301 | 154 | 3 | 34 | 330 | 37 | 337 | 3.20e-98 | 293 |
MS.gene02412.t1 | MTR_4g074995 | 44.745 | 333 | 156 | 4 | 1 | 330 | 1 | 308 | 7.94e-98 | 291 |
MS.gene02412.t1 | MTR_4g029190 | 49.508 | 305 | 141 | 5 | 30 | 330 | 45 | 340 | 2.31e-97 | 291 |
MS.gene02412.t1 | MTR_2g029910 | 46.319 | 326 | 166 | 3 | 14 | 330 | 7 | 332 | 3.17e-97 | 291 |
MS.gene02412.t1 | MTR_3g466180 | 48.148 | 324 | 151 | 3 | 7 | 330 | 17 | 323 | 3.80e-97 | 290 |
MS.gene02412.t1 | MTR_4g125940 | 53.455 | 275 | 123 | 2 | 59 | 330 | 2 | 274 | 2.20e-96 | 286 |
MS.gene02412.t1 | MTR_4g029200 | 47.682 | 302 | 148 | 3 | 30 | 330 | 46 | 338 | 9.63e-96 | 287 |
MS.gene02412.t1 | MTR_4g030890 | 48.675 | 302 | 151 | 3 | 30 | 331 | 100 | 397 | 4.59e-95 | 288 |
MS.gene02412.t1 | MTR_4g074990 | 45.846 | 325 | 145 | 4 | 9 | 330 | 9 | 305 | 1.28e-94 | 283 |
MS.gene02412.t1 | MTR_2g088770 | 46.547 | 333 | 167 | 6 | 1 | 331 | 3 | 326 | 1.46e-93 | 281 |
MS.gene02412.t1 | MTR_4g031140 | 46.844 | 301 | 156 | 3 | 30 | 330 | 28 | 324 | 2.67e-93 | 281 |
MS.gene02412.t1 | MTR_3g467600 | 45.062 | 324 | 165 | 5 | 11 | 330 | 10 | 324 | 5.61e-93 | 280 |
MS.gene02412.t1 | MTR_1g115900 | 44.892 | 323 | 166 | 4 | 10 | 330 | 9 | 321 | 1.57e-91 | 276 |
MS.gene02412.t1 | MTR_3g072190 | 54.651 | 258 | 109 | 2 | 73 | 330 | 2 | 251 | 9.21e-91 | 271 |
MS.gene02412.t1 | MTR_2g029830 | 52.918 | 257 | 120 | 1 | 75 | 330 | 5 | 261 | 2.40e-90 | 272 |
MS.gene02412.t1 | MTR_4g046713 | 47.351 | 302 | 156 | 3 | 30 | 330 | 27 | 326 | 2.51e-89 | 270 |
MS.gene02412.t1 | MTR_2g008710 | 45.946 | 333 | 158 | 7 | 7 | 330 | 6 | 325 | 5.25e-87 | 265 |
MS.gene02412.t1 | MTR_7g107520 | 45.092 | 326 | 171 | 5 | 5 | 330 | 3 | 320 | 1.39e-86 | 263 |
MS.gene02412.t1 | MTR_3g092990 | 47.157 | 299 | 156 | 2 | 34 | 331 | 30 | 327 | 4.30e-86 | 262 |
MS.gene02412.t1 | MTR_4g133800 | 45.118 | 297 | 153 | 5 | 35 | 330 | 46 | 333 | 8.30e-83 | 254 |
MS.gene02412.t1 | MTR_1g038680 | 46.179 | 301 | 157 | 5 | 34 | 330 | 33 | 332 | 9.10e-83 | 254 |
MS.gene02412.t1 | MTR_1g086320 | 46.179 | 301 | 157 | 3 | 34 | 330 | 34 | 333 | 1.27e-82 | 254 |
MS.gene02412.t1 | MTR_5g022870 | 42.727 | 330 | 172 | 6 | 1 | 330 | 4 | 316 | 1.71e-82 | 253 |
MS.gene02412.t1 | MTR_4g074980 | 43.750 | 304 | 140 | 4 | 27 | 330 | 22 | 294 | 3.92e-82 | 251 |
MS.gene02412.t1 | MTR_2g437770 | 45.752 | 306 | 155 | 7 | 26 | 330 | 46 | 341 | 4.54e-81 | 250 |
MS.gene02412.t1 | MTR_8g075100 | 44.816 | 299 | 154 | 6 | 34 | 330 | 30 | 319 | 4.96e-81 | 249 |
MS.gene02412.t1 | MTR_4g074980 | 50.000 | 238 | 110 | 2 | 27 | 261 | 22 | 253 | 3.51e-80 | 244 |
MS.gene02412.t1 | MTR_1g086490 | 44.805 | 308 | 158 | 4 | 34 | 330 | 34 | 340 | 5.14e-80 | 247 |
MS.gene02412.t1 | MTR_1g101830 | 41.846 | 325 | 176 | 7 | 7 | 330 | 10 | 322 | 1.07e-79 | 246 |
MS.gene02412.t1 | MTR_4g114210 | 41.493 | 335 | 176 | 7 | 1 | 330 | 1 | 320 | 1.54e-78 | 243 |
MS.gene02412.t1 | MTR_6g027440 | 43.098 | 297 | 162 | 5 | 34 | 330 | 25 | 314 | 2.39e-77 | 239 |
MS.gene02412.t1 | MTR_7g086870 | 41.447 | 304 | 167 | 5 | 28 | 331 | 20 | 312 | 4.90e-77 | 239 |
MS.gene02412.t1 | MTR_0155s0040 | 39.091 | 330 | 186 | 7 | 1 | 330 | 1 | 315 | 2.84e-76 | 237 |
MS.gene02412.t1 | MTR_5g074860 | 42.671 | 307 | 125 | 5 | 27 | 329 | 26 | 285 | 3.05e-76 | 236 |
MS.gene02412.t1 | MTR_1g066710 | 43.189 | 301 | 159 | 5 | 34 | 330 | 31 | 323 | 5.75e-76 | 236 |
MS.gene02412.t1 | MTR_1g025980 | 40.729 | 329 | 183 | 6 | 1 | 329 | 1 | 317 | 1.62e-74 | 232 |
MS.gene02412.t1 | MTR_1g077000 | 39.628 | 323 | 183 | 6 | 8 | 330 | 17 | 327 | 1.72e-74 | 233 |
MS.gene02412.t1 | MTR_8g062780 | 40.741 | 324 | 185 | 4 | 10 | 331 | 7 | 325 | 6.77e-74 | 231 |
MS.gene02412.t1 | MTR_7g086820 | 42.088 | 297 | 164 | 6 | 34 | 330 | 24 | 312 | 7.48e-74 | 231 |
MS.gene02412.t1 | MTR_3g092990 | 44.966 | 298 | 151 | 3 | 34 | 330 | 30 | 315 | 1.03e-73 | 230 |
MS.gene02412.t1 | MTR_7g029030 | 42.715 | 302 | 166 | 4 | 30 | 330 | 25 | 320 | 2.06e-72 | 227 |
MS.gene02412.t1 | MTR_5g016010 | 39.938 | 323 | 187 | 5 | 8 | 326 | 6 | 325 | 1.44e-71 | 225 |
MS.gene02412.t1 | MTR_1g066380 | 41.333 | 300 | 166 | 4 | 34 | 330 | 31 | 323 | 2.21e-71 | 224 |
MS.gene02412.t1 | MTR_4g087965 | 39.104 | 335 | 188 | 6 | 7 | 326 | 9 | 342 | 2.36e-71 | 225 |
MS.gene02412.t1 | MTR_6g043240 | 38.235 | 340 | 183 | 9 | 2 | 330 | 8 | 331 | 1.95e-70 | 223 |
MS.gene02412.t1 | MTR_1g009750 | 40.426 | 329 | 186 | 5 | 5 | 330 | 7 | 328 | 2.12e-70 | 222 |
MS.gene02412.t1 | MTR_1g066640 | 41.333 | 300 | 166 | 4 | 34 | 330 | 31 | 323 | 1.43e-69 | 220 |
MS.gene02412.t1 | MTR_4g132490 | 38.926 | 298 | 178 | 3 | 34 | 330 | 33 | 327 | 3.08e-69 | 219 |
MS.gene02412.t1 | MTR_6g043280 | 36.858 | 331 | 189 | 6 | 8 | 330 | 14 | 332 | 1.05e-68 | 218 |
MS.gene02412.t1 | MTR_6g043460 | 39.697 | 330 | 184 | 7 | 5 | 331 | 12 | 329 | 2.90e-68 | 217 |
MS.gene02412.t1 | MTR_4g127670 | 39.867 | 301 | 172 | 4 | 34 | 330 | 28 | 323 | 3.31e-68 | 216 |
MS.gene02412.t1 | MTR_2g008160 | 42.532 | 308 | 162 | 9 | 30 | 330 | 24 | 323 | 5.99e-68 | 216 |
MS.gene02412.t1 | MTR_1g066680 | 40.000 | 300 | 169 | 5 | 34 | 330 | 31 | 322 | 1.17e-67 | 215 |
MS.gene02412.t1 | MTR_1g090760 | 36.474 | 329 | 201 | 5 | 5 | 330 | 7 | 330 | 3.80e-67 | 214 |
MS.gene02412.t1 | MTR_2g078610 | 37.391 | 345 | 181 | 8 | 18 | 329 | 63 | 405 | 8.40e-67 | 215 |
MS.gene02412.t1 | MTR_3g105790 | 41.667 | 300 | 166 | 4 | 34 | 330 | 29 | 322 | 1.12e-66 | 213 |
MS.gene02412.t1 | MTR_2g067440 | 37.318 | 343 | 181 | 7 | 18 | 329 | 47 | 386 | 1.14e-66 | 214 |
MS.gene02412.t1 | MTR_2g077990 | 36.812 | 345 | 183 | 7 | 18 | 329 | 63 | 405 | 2.91e-66 | 214 |
MS.gene02412.t1 | MTR_4g095450 | 40.123 | 324 | 183 | 6 | 6 | 326 | 5 | 320 | 5.08e-66 | 211 |
MS.gene02412.t1 | MTR_2g099175 | 37.092 | 337 | 193 | 9 | 5 | 330 | 7 | 335 | 2.12e-65 | 209 |
MS.gene02412.t1 | MTR_4g132110 | 36.923 | 325 | 192 | 5 | 8 | 326 | 7 | 324 | 1.85e-64 | 207 |
MS.gene02412.t1 | MTR_0286s0010 | 35.168 | 327 | 200 | 6 | 7 | 330 | 17 | 334 | 3.03e-63 | 204 |
MS.gene02412.t1 | MTR_6g008075 | 35.168 | 327 | 200 | 6 | 7 | 330 | 17 | 334 | 3.03e-63 | 204 |
MS.gene02412.t1 | MTR_2g008730 | 40.864 | 301 | 144 | 5 | 34 | 330 | 31 | 301 | 4.12e-63 | 202 |
MS.gene02412.t1 | MTR_2g078280 | 37.349 | 332 | 173 | 7 | 18 | 316 | 63 | 392 | 3.16e-62 | 203 |
MS.gene02412.t1 | MTR_4g132110 | 36.364 | 330 | 192 | 6 | 8 | 326 | 7 | 329 | 4.33e-62 | 201 |
MS.gene02412.t1 | MTR_5g033470 | 36.570 | 309 | 188 | 5 | 28 | 330 | 71 | 377 | 5.20e-59 | 194 |
MS.gene02412.t1 | MTR_1g009750 | 37.003 | 327 | 183 | 6 | 5 | 330 | 7 | 311 | 4.57e-58 | 190 |
MS.gene02412.t1 | MTR_1g066380 | 40.000 | 260 | 146 | 4 | 74 | 330 | 3 | 255 | 1.10e-57 | 187 |
MS.gene02412.t1 | MTR_5g074700 | 45.494 | 233 | 103 | 6 | 101 | 330 | 3 | 214 | 3.13e-56 | 182 |
MS.gene02412.t1 | MTR_3g072210 | 51.309 | 191 | 85 | 2 | 141 | 330 | 55 | 238 | 3.17e-56 | 182 |
MS.gene02412.t1 | MTR_2g067450 | 36.877 | 301 | 179 | 7 | 34 | 329 | 15 | 309 | 6.30e-54 | 179 |
MS.gene02412.t1 | MTR_2g008160 | 37.987 | 308 | 141 | 9 | 30 | 330 | 24 | 288 | 3.12e-53 | 177 |
MS.gene02412.t1 | MTR_0147s0010 | 33.544 | 316 | 175 | 5 | 34 | 329 | 81 | 381 | 1.15e-49 | 170 |
MS.gene02412.t1 | MTR_3g105790 | 41.909 | 241 | 135 | 3 | 93 | 330 | 8 | 246 | 1.58e-47 | 160 |
MS.gene02412.t1 | MTR_7g072490 | 39.516 | 248 | 88 | 3 | 76 | 323 | 2 | 187 | 3.28e-45 | 153 |
MS.gene02412.t1 | MTR_2g008160 | 47.674 | 172 | 82 | 4 | 30 | 199 | 24 | 189 | 8.97e-45 | 152 |
MS.gene02412.t1 | MTR_2g029880 | 43.979 | 191 | 94 | 3 | 142 | 330 | 9 | 188 | 1.19e-43 | 149 |
MS.gene02412.t1 | MTR_3g072260 | 54.478 | 134 | 55 | 2 | 7 | 138 | 5 | 134 | 4.53e-41 | 140 |
MS.gene02412.t1 | MTR_2g078560 | 30.531 | 226 | 125 | 4 | 135 | 329 | 95 | 319 | 1.42e-29 | 115 |
MS.gene02412.t1 | MTR_3g462850 | 41.844 | 141 | 78 | 3 | 194 | 330 | 9 | 149 | 6.71e-26 | 101 |
MS.gene02412.t1 | MTR_1g089005 | 42.963 | 135 | 65 | 3 | 13 | 141 | 3 | 131 | 2.99e-25 | 99.8 |
MS.gene02412.t1 | MTR_7g086790 | 35.417 | 192 | 102 | 6 | 77 | 268 | 17 | 186 | 3.57e-24 | 97.8 |
MS.gene02412.t1 | MTR_2g077980 | 27.076 | 277 | 163 | 7 | 92 | 331 | 11 | 285 | 3.65e-24 | 100 |
MS.gene02412.t1 | MTR_6g048160 | 61.972 | 71 | 23 | 2 | 69 | 139 | 22 | 88 | 3.82e-21 | 86.7 |
MS.gene02412.t1 | MTR_4g031040 | 34.286 | 175 | 71 | 3 | 89 | 263 | 1 | 131 | 1.58e-20 | 86.3 |
MS.gene02412.t1 | MTR_7g086810 | 38.843 | 121 | 48 | 1 | 28 | 148 | 4 | 98 | 6.65e-20 | 87.4 |
MS.gene02412.t1 | MTR_5g058120 | 34.146 | 164 | 92 | 4 | 165 | 326 | 6 | 155 | 3.43e-19 | 85.9 |
MS.gene02412.t1 | MTR_4g114220 | 50.000 | 82 | 31 | 2 | 56 | 137 | 29 | 100 | 2.61e-18 | 80.5 |
MS.gene02412.t1 | MTR_5g074770 | 42.991 | 107 | 54 | 3 | 224 | 329 | 8 | 108 | 7.02e-18 | 78.6 |
MS.gene02412.t1 | MTR_3g107060 | 28.517 | 263 | 121 | 8 | 61 | 311 | 105 | 312 | 7.24e-17 | 80.5 |
MS.gene02412.t1 | MTR_1g098320 | 45.333 | 75 | 40 | 1 | 252 | 326 | 47 | 120 | 5.61e-16 | 74.3 |
MS.gene02412.t1 | MTR_4g012865 | 51.562 | 64 | 31 | 0 | 34 | 97 | 81 | 144 | 6.91e-16 | 74.3 |
MS.gene02412.t1 | MTR_7g086785 | 47.297 | 74 | 38 | 1 | 75 | 148 | 3 | 75 | 7.05e-16 | 73.9 |
MS.gene02412.t1 | MTR_7g107500 | 52.000 | 75 | 34 | 2 | 256 | 330 | 25 | 97 | 7.48e-16 | 72.4 |
MS.gene02412.t1 | MTR_2g029930 | 40.698 | 86 | 26 | 2 | 34 | 108 | 23 | 94 | 4.39e-15 | 70.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene02412.t1 | AT5G66390 | 75.150 | 334 | 80 | 2 | 1 | 331 | 1 | 334 | 0.0 | 532 |
MS.gene02412.t1 | AT4G36430 | 69.811 | 318 | 96 | 0 | 14 | 331 | 14 | 331 | 1.50e-170 | 477 |
MS.gene02412.t1 | AT2G18150 | 67.976 | 331 | 100 | 1 | 7 | 331 | 7 | 337 | 5.15e-170 | 476 |
MS.gene02412.t1 | AT2G18140 | 64.048 | 331 | 114 | 1 | 6 | 331 | 6 | 336 | 8.08e-158 | 445 |
MS.gene02412.t1 | AT3G50990 | 64.417 | 326 | 111 | 1 | 11 | 331 | 17 | 342 | 4.81e-154 | 436 |
MS.gene02412.t1 | AT1G44970 | 65.232 | 302 | 104 | 1 | 30 | 330 | 45 | 346 | 2.07e-140 | 401 |
MS.gene02412.t1 | AT2G35380 | 53.896 | 308 | 133 | 3 | 30 | 330 | 30 | 335 | 3.02e-110 | 324 |
MS.gene02412.t1 | AT5G06720 | 50.993 | 302 | 147 | 1 | 30 | 330 | 32 | 333 | 9.16e-110 | 323 |
MS.gene02412.t1 | AT5G05340 | 49.837 | 307 | 144 | 3 | 26 | 330 | 26 | 324 | 1.72e-107 | 317 |
MS.gene02412.t1 | AT4G08770 | 50.820 | 305 | 147 | 2 | 30 | 331 | 24 | 328 | 4.49e-106 | 314 |
MS.gene02412.t1 | AT5G19890 | 51.242 | 322 | 148 | 4 | 13 | 331 | 13 | 328 | 2.92e-105 | 311 |
MS.gene02412.t1 | AT4G08780 | 50.654 | 306 | 146 | 3 | 30 | 331 | 24 | 328 | 2.98e-105 | 312 |
MS.gene02412.t1 | AT1G14550 | 48.457 | 324 | 154 | 3 | 8 | 330 | 10 | 321 | 6.45e-105 | 310 |
MS.gene02412.t1 | AT1G49570 | 53.535 | 297 | 134 | 3 | 33 | 326 | 51 | 346 | 7.97e-104 | 308 |
MS.gene02412.t1 | AT3G32980 | 50.164 | 305 | 149 | 2 | 30 | 331 | 31 | 335 | 1.67e-103 | 308 |
MS.gene02412.t1 | AT3G49110 | 49.521 | 313 | 155 | 2 | 22 | 331 | 25 | 337 | 2.01e-103 | 307 |
MS.gene02412.t1 | AT5G06730 | 47.682 | 302 | 157 | 1 | 30 | 330 | 33 | 334 | 7.97e-103 | 306 |
MS.gene02412.t1 | AT2G38390 | 47.712 | 306 | 158 | 2 | 27 | 330 | 28 | 333 | 9.56e-102 | 303 |
MS.gene02412.t1 | AT5G58400 | 45.872 | 327 | 160 | 5 | 7 | 330 | 13 | 325 | 1.83e-101 | 301 |
MS.gene02412.t1 | AT4G16270 | 50.671 | 298 | 143 | 3 | 34 | 330 | 54 | 348 | 2.42e-100 | 299 |
MS.gene02412.t1 | AT3G49120 | 49.836 | 305 | 150 | 2 | 30 | 331 | 32 | 336 | 3.03e-100 | 299 |
MS.gene02412.t1 | AT2G38380 | 48.185 | 303 | 155 | 2 | 30 | 330 | 31 | 333 | 1.54e-97 | 292 |
MS.gene02412.t1 | AT2G22420 | 48.505 | 301 | 151 | 3 | 30 | 330 | 23 | 319 | 3.61e-96 | 288 |
MS.gene02412.t1 | AT1G14540 | 44.753 | 324 | 164 | 2 | 7 | 330 | 7 | 315 | 1.80e-95 | 286 |
MS.gene02412.t1 | AT5G58390 | 46.201 | 329 | 160 | 5 | 5 | 330 | 2 | 316 | 5.27e-95 | 285 |
MS.gene02412.t1 | AT1G68850 | 44.242 | 330 | 178 | 4 | 7 | 330 | 6 | 335 | 2.07e-94 | 284 |
MS.gene02412.t1 | AT3G03670 | 43.827 | 324 | 174 | 3 | 7 | 330 | 6 | 321 | 5.18e-90 | 272 |
MS.gene02412.t1 | AT5G19880 | 42.202 | 327 | 179 | 4 | 8 | 330 | 9 | 329 | 6.16e-87 | 265 |
MS.gene02412.t1 | AT4G11290 | 46.154 | 299 | 158 | 3 | 34 | 330 | 29 | 326 | 4.09e-86 | 262 |
MS.gene02412.t1 | AT1G05260 | 42.857 | 329 | 183 | 4 | 5 | 331 | 1 | 326 | 4.50e-86 | 262 |
MS.gene02412.t1 | AT5G15180 | 46.465 | 297 | 156 | 3 | 34 | 330 | 36 | 329 | 2.49e-85 | 260 |
MS.gene02412.t1 | AT5G64120 | 43.771 | 297 | 160 | 5 | 34 | 330 | 39 | 328 | 9.64e-84 | 256 |
MS.gene02412.t1 | AT3G21770 | 44.737 | 304 | 159 | 4 | 27 | 326 | 26 | 324 | 2.35e-82 | 253 |
MS.gene02412.t1 | AT1G71695 | 42.773 | 339 | 172 | 9 | 5 | 330 | 10 | 339 | 7.62e-82 | 253 |
MS.gene02412.t1 | AT5G17820 | 40.303 | 330 | 180 | 6 | 1 | 330 | 1 | 313 | 9.02e-81 | 248 |
MS.gene02412.t1 | AT5G42180 | 45.000 | 300 | 159 | 4 | 30 | 329 | 23 | 316 | 3.55e-80 | 247 |
MS.gene02412.t1 | AT5G17820 | 40.303 | 330 | 180 | 6 | 1 | 330 | 54 | 366 | 8.98e-80 | 248 |
MS.gene02412.t1 | AT2G35380 | 50.602 | 249 | 114 | 3 | 89 | 330 | 1 | 247 | 1.70e-79 | 243 |
MS.gene02412.t1 | AT3G01190 | 44.237 | 321 | 168 | 5 | 10 | 330 | 12 | 321 | 2.70e-79 | 245 |
MS.gene02412.t1 | AT1G05240 | 43.771 | 297 | 158 | 5 | 34 | 326 | 30 | 321 | 4.66e-79 | 244 |
MS.gene02412.t1 | AT1G05250 | 43.771 | 297 | 158 | 5 | 34 | 326 | 30 | 321 | 4.66e-79 | 244 |
MS.gene02412.t1 | AT2G39040 | 44.444 | 315 | 165 | 6 | 23 | 330 | 39 | 350 | 1.18e-78 | 244 |
MS.gene02412.t1 | AT2G41480 | 44.371 | 302 | 157 | 5 | 34 | 330 | 33 | 328 | 2.32e-78 | 243 |
MS.gene02412.t1 | AT5G51890 | 40.549 | 328 | 177 | 8 | 7 | 330 | 9 | 322 | 5.03e-77 | 239 |
MS.gene02412.t1 | AT5G39580 | 43.960 | 298 | 159 | 6 | 34 | 330 | 29 | 319 | 1.31e-76 | 238 |
MS.gene02412.t1 | AT1G30870 | 44.984 | 309 | 158 | 6 | 26 | 331 | 47 | 346 | 7.02e-76 | 237 |
MS.gene02412.t1 | AT5G64100 | 44.147 | 299 | 157 | 5 | 34 | 330 | 41 | 331 | 2.50e-74 | 232 |
MS.gene02412.t1 | AT5G47000 | 38.532 | 327 | 191 | 5 | 7 | 331 | 13 | 331 | 1.35e-72 | 228 |
MS.gene02412.t1 | AT4G26010 | 41.195 | 318 | 172 | 7 | 15 | 331 | 7 | 310 | 3.97e-72 | 226 |
MS.gene02412.t1 | AT4G26010 | 41.195 | 318 | 172 | 7 | 15 | 331 | 35 | 338 | 6.24e-72 | 226 |
MS.gene02412.t1 | AT4G33870 | 36.607 | 336 | 176 | 4 | 29 | 329 | 67 | 400 | 1.43e-71 | 228 |
MS.gene02412.t1 | AT5G64110 | 43.333 | 300 | 160 | 5 | 34 | 330 | 38 | 330 | 2.72e-71 | 224 |
MS.gene02412.t1 | AT2G37130 | 40.909 | 308 | 171 | 5 | 27 | 330 | 27 | 327 | 3.91e-71 | 224 |
MS.gene02412.t1 | AT2G37130 | 41.196 | 301 | 166 | 5 | 34 | 330 | 3 | 296 | 7.74e-71 | 222 |
MS.gene02412.t1 | AT4G37520 | 39.474 | 304 | 180 | 3 | 30 | 330 | 27 | 329 | 1.80e-70 | 222 |
MS.gene02412.t1 | AT4G37530 | 40.132 | 304 | 178 | 3 | 30 | 330 | 27 | 329 | 4.60e-70 | 221 |
MS.gene02412.t1 | AT2G18980 | 38.739 | 333 | 191 | 5 | 1 | 330 | 1 | 323 | 1.77e-69 | 219 |
MS.gene02412.t1 | AT1G24110 | 40.000 | 305 | 177 | 5 | 30 | 331 | 22 | 323 | 3.10e-69 | 219 |
MS.gene02412.t1 | AT4G33420 | 39.210 | 329 | 182 | 8 | 2 | 330 | 15 | 325 | 3.21e-69 | 219 |
MS.gene02412.t1 | AT3G28200 | 39.604 | 303 | 174 | 4 | 30 | 330 | 21 | 316 | 4.10e-69 | 218 |
MS.gene02412.t1 | AT5G14130 | 37.963 | 324 | 188 | 5 | 8 | 330 | 19 | 330 | 6.73e-69 | 218 |
MS.gene02412.t1 | AT4G37520 | 39.145 | 304 | 178 | 4 | 30 | 330 | 27 | 326 | 1.06e-68 | 218 |
MS.gene02412.t1 | AT4G31760 | 40.803 | 299 | 170 | 4 | 34 | 330 | 33 | 326 | 1.08e-68 | 218 |
MS.gene02412.t1 | AT4G33420 | 39.210 | 329 | 182 | 8 | 2 | 330 | 62 | 372 | 1.79e-68 | 219 |
MS.gene02412.t1 | AT4G30170 | 39.355 | 310 | 176 | 6 | 26 | 330 | 23 | 325 | 2.15e-68 | 217 |
MS.gene02412.t1 | AT5G14130 | 37.963 | 324 | 188 | 5 | 8 | 330 | 60 | 371 | 2.67e-68 | 218 |
MS.gene02412.t1 | AT1G77100 | 40.594 | 303 | 163 | 8 | 34 | 330 | 28 | 319 | 4.50e-68 | 216 |
MS.gene02412.t1 | AT2G24800 | 41.667 | 300 | 167 | 5 | 34 | 330 | 35 | 329 | 5.03e-67 | 213 |
MS.gene02412.t1 | AT2G34060 | 38.066 | 331 | 194 | 6 | 7 | 327 | 14 | 343 | 5.85e-67 | 214 |
MS.gene02412.t1 | AT4G25980 | 38.411 | 302 | 176 | 5 | 34 | 330 | 30 | 326 | 1.23e-66 | 213 |
MS.gene02412.t1 | AT4G17690 | 38.614 | 303 | 178 | 4 | 30 | 330 | 26 | 322 | 1.96e-66 | 212 |
MS.gene02412.t1 | AT1G34510 | 39.432 | 317 | 177 | 7 | 16 | 331 | 8 | 310 | 2.35e-66 | 211 |
MS.gene02412.t1 | AT5G40150 | 38.111 | 307 | 182 | 4 | 26 | 330 | 28 | 328 | 3.09e-66 | 211 |
MS.gene02412.t1 | AT4G21960 | 39.333 | 300 | 172 | 4 | 34 | 330 | 35 | 327 | 1.08e-65 | 210 |
MS.gene02412.t1 | AT5G22410 | 37.798 | 336 | 189 | 11 | 2 | 331 | 5 | 326 | 2.10e-65 | 209 |
MS.gene02412.t1 | AT5G67400 | 39.145 | 304 | 181 | 3 | 30 | 330 | 27 | 329 | 4.94e-64 | 206 |
MS.gene02412.t1 | AT3G49960 | 38.333 | 300 | 181 | 3 | 34 | 330 | 31 | 329 | 1.29e-63 | 205 |
MS.gene02412.t1 | AT4G37530 | 41.365 | 249 | 143 | 2 | 34 | 279 | 31 | 279 | 5.07e-60 | 194 |
MS.gene02412.t1 | AT2G43480 | 37.785 | 307 | 178 | 7 | 29 | 330 | 37 | 335 | 1.33e-59 | 194 |
MS.gene02412.t1 | AT5G24070 | 33.923 | 339 | 204 | 7 | 5 | 330 | 4 | 335 | 3.19e-58 | 191 |
MS.gene02412.t1 | AT3G17070 | 35.398 | 339 | 183 | 10 | 13 | 330 | 16 | 339 | 1.01e-57 | 190 |
MS.gene02412.t1 | AT4G25980 | 45.732 | 164 | 85 | 3 | 34 | 197 | 75 | 234 | 4.48e-44 | 153 |
MS.gene02412.t1 | AT5G39580 | 46.784 | 171 | 86 | 3 | 34 | 204 | 29 | 194 | 2.98e-43 | 149 |
MS.gene02412.t1 | AT3G17070 | 33.333 | 288 | 162 | 9 | 58 | 330 | 4 | 276 | 6.58e-41 | 144 |
MS.gene02412.t1 | AT2G24800 | 46.626 | 163 | 83 | 1 | 34 | 196 | 35 | 193 | 1.49e-40 | 142 |
MS.gene02412.t1 | AT4G32320 | 27.609 | 297 | 140 | 10 | 29 | 311 | 86 | 321 | 2.20e-15 | 76.3 |
MS.gene02412.t1 | AT3G42570 | 36.111 | 144 | 78 | 4 | 55 | 195 | 15 | 147 | 2.46e-15 | 72.8 |
MS.gene02412.t1 | AT4G08390 | 25.641 | 273 | 140 | 11 | 64 | 312 | 126 | 359 | 8.26e-12 | 65.9 |
MS.gene02412.t1 | AT4G08390 | 25.641 | 273 | 140 | 11 | 64 | 312 | 127 | 360 | 8.53e-12 | 65.9 |
MS.gene02412.t1 | AT4G08390 | 25.641 | 273 | 140 | 11 | 64 | 312 | 127 | 360 | 8.53e-12 | 65.9 |
MS.gene02412.t1 | AT4G08390 | 25.641 | 273 | 140 | 11 | 64 | 312 | 127 | 360 | 8.53e-12 | 65.9 |
Find 71 sgRNAs with CRISPR-Local
Find 106 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCACCCCTTGATCCTGTTAA+AGG | 0.173311 | 5.3:-12207896 | None:intergenic |
CTTGACAATCTCTTCAACTT+TGG | 0.243603 | 5.3:-12206465 | None:intergenic |
AGTCTAGGACAAACAGATTT+TGG | 0.271787 | 5.3:-12207682 | None:intergenic |
CTGACTTGCCATTCCCAGTT+TGG | 0.295882 | 5.3:-12207595 | None:intergenic |
ATGGTTTGGAATGTATTGTT+AGG | 0.303652 | 5.3:-12207218 | None:intergenic |
GTTGATCTAGTTGCTCTATC+TGG | 0.307619 | 5.3:+12207275 | MS.gene02412:CDS |
GGAAACATTACTCCTTTAAC+AGG | 0.313337 | 5.3:+12207884 | MS.gene02412:CDS |
CTTAACTAAATTCAAGCTTA+AGG | 0.333245 | 5.3:+12207241 | MS.gene02412:CDS |
TGAATTTAGTTAAGATGGTT+TGG | 0.336203 | 5.3:-12207232 | None:intergenic |
TTGACAATCTCTTCAACTTT+GGG | 0.338379 | 5.3:-12206464 | None:intergenic |
CAAAGACTCTACAACCAAAC+TGG | 0.339170 | 5.3:+12207581 | MS.gene02412:CDS |
TTAACTAAATTCAAGCTTAA+GGG | 0.348519 | 5.3:+12207242 | MS.gene02412:CDS |
CCAAGTTGGGATGTACCTTT+AGG | 0.355271 | 5.3:+12207140 | MS.gene02412:CDS |
CAAATCCTCTAGCTGAATTA+CGG | 0.358640 | 5.3:-12206919 | None:intergenic |
CGCACTCGGTGCCCAAGATC+TGG | 0.377599 | 5.3:+12207653 | MS.gene02412:CDS |
CCTCTAGCTGAATTACGGTT+TGG | 0.384144 | 5.3:-12206914 | None:intergenic |
AAGCTTGAATTTAGTTAAGA+TGG | 0.387881 | 5.3:-12207237 | None:intergenic |
GCAATTGAGCTGCATAGTTT+TGG | 0.388025 | 5.3:-12207631 | None:intergenic |
TCCCATCTTCACCATGGACT+TGG | 0.398678 | 5.3:-12207864 | None:intergenic |
TATCAGCACAAGAGACTGTC+TGG | 0.410605 | 5.3:-12206985 | None:intergenic |
TTTGGTCTCCACCAGATCTT+GGG | 0.428573 | 5.3:-12207664 | None:intergenic |
TCAGACTGGTGGACCAAGTT+GGG | 0.428730 | 5.3:+12207127 | MS.gene02412:intron |
TGGTTTGGAATGTATTGTTA+GGG | 0.440392 | 5.3:-12207217 | None:intergenic |
TGCCAAGTCCATGGTGAAGA+TGG | 0.446450 | 5.3:+12207862 | MS.gene02412:CDS |
ACAGAATTTCATCAGAACTT+AGG | 0.456756 | 5.3:-12207766 | None:intergenic |
CAGCAAGGAAGCAGCCATGC+GGG | 0.463288 | 5.3:-12206519 | None:intergenic |
GTAGAGTCTTTGTCTAAAGC+TGG | 0.469738 | 5.3:-12207570 | None:intergenic |
TTACTCCTTTAACAGGATCA+AGG | 0.477963 | 5.3:+12207891 | MS.gene02412:CDS |
TGGAATGTATTGTTAGGGGC+AGG | 0.478296 | 5.3:-12207212 | None:intergenic |
ATGCAGCTCAATTGCGCACT+CGG | 0.490653 | 5.3:+12207639 | MS.gene02412:CDS |
TCTCTTGGTGCAAGCATAAG+TGG | 0.493124 | 5.3:+12207173 | MS.gene02412:CDS |
CACGAATCATCGTAAAATTG+AGG | 0.496099 | 5.3:-12206440 | None:intergenic |
CTCTACAACCAAACTGGGAA+TGG | 0.498579 | 5.3:+12207587 | MS.gene02412:CDS |
AGAACTTAGGAGACCCTTGT+TGG | 0.511655 | 5.3:-12207753 | None:intergenic |
TTAGGAAGAAGAGATTCTCT+TGG | 0.511790 | 5.3:+12207158 | MS.gene02412:CDS |
AGAGAATCTCTTCTTCCTAA+AGG | 0.516192 | 5.3:-12207155 | None:intergenic |
TACTCCTTTAACAGGATCAA+GGG | 0.516424 | 5.3:+12207892 | MS.gene02412:CDS |
GGTGCACCGCGAATCTCCTA+TGG | 0.523145 | 5.3:-12207549 | None:intergenic |
CCTAAAGGTACATCCCAACT+TGG | 0.526869 | 5.3:-12207140 | None:intergenic |
TGAACAATTTGCCAAGTCCA+TGG | 0.530596 | 5.3:+12207853 | MS.gene02412:CDS |
ATTCAATCCTTTCAGACTGG+TGG | 0.533760 | 5.3:+12207116 | MS.gene02412:intron |
AGCGACAGCCTTAGCAACTA+CGG | 0.534152 | 5.3:-12206489 | None:intergenic |
TTCAGACTGGTGGACCAAGT+TGG | 0.534896 | 5.3:+12207126 | MS.gene02412:intron |
GCCAAGTCCATGGTGAAGAT+GGG | 0.541716 | 5.3:+12207863 | MS.gene02412:CDS |
TGTCAAGTCCGTAGTTGCTA+AGG | 0.541793 | 5.3:+12206481 | MS.gene02412:CDS |
CATCGTAAAATTGAGGGTAG+AGG | 0.558315 | 5.3:-12206433 | None:intergenic |
ACGAATCATCGTAAAATTGA+GGG | 0.561360 | 5.3:-12206439 | None:intergenic |
TTACCGGTGTGACAAAGTCT+AGG | 0.570159 | 5.3:-12207697 | None:intergenic |
CCAAACCGTAATTCAGCTAG+AGG | 0.570737 | 5.3:+12206914 | MS.gene02412:CDS |
CAAGAACTTATTGACCAACA+AGG | 0.589061 | 5.3:+12207739 | MS.gene02412:CDS |
GAACAATCATCAGCGAAAAG+AGG | 0.590852 | 5.3:+12206885 | MS.gene02412:CDS |
AGCAAGGAAGCAGCCATGCG+GGG | 0.595766 | 5.3:-12206518 | None:intergenic |
ATACCTTGACAAAACAGTCA+TGG | 0.599142 | 5.3:-12206553 | None:intergenic |
ATCAGCACAAGAGACTGTCT+GGG | 0.599732 | 5.3:-12206984 | None:intergenic |
AATCAGAAAACGCTGCAGAA+AGG | 0.603094 | 5.3:+12207919 | MS.gene02412:CDS |
GTTATAGGTAGCCACACCAT+AGG | 0.605653 | 5.3:+12207533 | MS.gene02412:intron |
GCCACACCATAGGAGATTCG+CGG | 0.611411 | 5.3:+12207543 | MS.gene02412:CDS |
TGTCGCTAAAGAACCCCGCA+TGG | 0.629260 | 5.3:+12206505 | MS.gene02412:CDS |
ACCGCGAATCTCCTATGGTG+TGG | 0.629403 | 5.3:-12207544 | None:intergenic |
AATGTTTCCCATCTTCACCA+TGG | 0.629418 | 5.3:-12207870 | None:intergenic |
GGGACACTCTTTCTCTACAG+CGG | 0.636108 | 5.3:-12206963 | None:intergenic |
AAAGACTCTACAACCAAACT+GGG | 0.636762 | 5.3:+12207582 | MS.gene02412:CDS |
ACTCGGTGCCCAAGATCTGG+TGG | 0.639184 | 5.3:+12207656 | MS.gene02412:CDS |
TGTCCTAGACTTTGTCACAC+CGG | 0.643380 | 5.3:+12207694 | MS.gene02412:CDS |
ACTCCTTTAACAGGATCAAG+GGG | 0.648428 | 5.3:+12207893 | MS.gene02412:CDS |
AAGAACTTATTGACCAACAA+GGG | 0.649683 | 5.3:+12207740 | MS.gene02412:CDS |
ATGGAAATGTAGTCTCAGCA+AGG | 0.653675 | 5.3:-12206534 | None:intergenic |
TCAGCAAGGAAGCAGCCATG+CGG | 0.656575 | 5.3:-12206520 | None:intergenic |
GGTTTGGAATGTATTGTTAG+GGG | 0.668824 | 5.3:-12207216 | None:intergenic |
TCAGTGTTGCTAGATAGCAG+TGG | 0.688736 | 5.3:+12206863 | MS.gene02412:CDS |
TCAGCACAAGAGACTGTCTG+GGG | 0.742569 | 5.3:-12206983 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ACAAATTCTTGTAATGTTAT+AGG | + | chr5.3:12207518-12207537 | MS.gene02412:intron | 20.0% |
!! | GAAGAAAATTGAGATAAATT+TGG | - | chr5.3:12207456-12207475 | None:intergenic | 20.0% |
!! | GTAAACAATGTTTAAAAATG+TGG | + | chr5.3:12206586-12206605 | MS.gene02412:intron | 20.0% |
!! | TTAACTAAATTCAAGCTTAA+GGG | + | chr5.3:12207242-12207261 | MS.gene02412:CDS | 20.0% |
!!! | AATTTTCTTCATTTGAGTTT+TGG | + | chr5.3:12207466-12207485 | MS.gene02412:intron | 20.0% |
!!! | ACTTGATATTTAACTTTTGA+TGG | - | chr5.3:12207091-12207110 | None:intergenic | 20.0% |
!!! | TGTTATTTTTTAAAACCTTG+TGG | + | chr5.3:12206693-12206712 | MS.gene02412:intron | 20.0% |
! | AAGCTTGAATTTAGTTAAGA+TGG | - | chr5.3:12207240-12207259 | None:intergenic | 25.0% |
! | AATGTTTAAAAATGTGGTCA+TGG | + | chr5.3:12206592-12206611 | MS.gene02412:intron | 25.0% |
! | AGATGAAATAGATTAGTACT+AGG | - | chr5.3:12207307-12207326 | None:intergenic | 25.0% |
! | CTTAACTAAATTCAAGCTTA+AGG | + | chr5.3:12207241-12207260 | MS.gene02412:CDS | 25.0% |
! | TGAATTTAGTTAAGATGGTT+TGG | - | chr5.3:12207235-12207254 | None:intergenic | 25.0% |
! | TGATCTATGAGTTGTATATT+GGG | + | chr5.3:12206756-12206775 | MS.gene02412:intron | 25.0% |
AAGAACTTATTGACCAACAA+GGG | + | chr5.3:12207740-12207759 | MS.gene02412:CDS | 30.0% | |
AATATTCAATCCTTTCAGAC+TGG | + | chr5.3:12207113-12207132 | MS.gene02412:intron | 30.0% | |
ACAGAATTTCATCAGAACTT+AGG | - | chr5.3:12207769-12207788 | None:intergenic | 30.0% | |
ACGAATCATCGTAAAATTGA+GGG | - | chr5.3:12206442-12206461 | None:intergenic | 30.0% | |
CAAGTATGTGTTGAAAACAA+TGG | - | chr5.3:12207330-12207349 | None:intergenic | 30.0% | |
CACTGTAAAAAGAAAGTTGA+TGG | + | chr5.3:12206407-12206426 | MS.gene02412:CDS | 30.0% | |
CATAAAAAACCTTAACGATG+TGG | + | chr5.3:12206653-12206672 | MS.gene02412:intron | 30.0% | |
GTGATCTATGAGTTGTATAT+TGG | + | chr5.3:12206755-12206774 | MS.gene02412:intron | 30.0% | |
TTGACAATCTCTTCAACTTT+GGG | - | chr5.3:12206467-12206486 | None:intergenic | 30.0% | |
! | ATGGTTTGGAATGTATTGTT+AGG | - | chr5.3:12207221-12207240 | None:intergenic | 30.0% |
! | ATTTTCTATTTGCATCCACA+AGG | - | chr5.3:12206711-12206730 | None:intergenic | 30.0% |
! | TAGTTGTTGTCGAATTTTAC+CGG | - | chr5.3:12207716-12207735 | None:intergenic | 30.0% |
! | TGGTTTGGAATGTATTGTTA+GGG | - | chr5.3:12207220-12207239 | None:intergenic | 30.0% |
! | TTCTTTTTACAGTGACAGAA+GGG | - | chr5.3:12206401-12206420 | None:intergenic | 30.0% |
! | TTTCTTTTTACAGTGACAGA+AGG | - | chr5.3:12206402-12206421 | None:intergenic | 30.0% |
!! | ACTTTTGATGGTCATTGATA+AGG | - | chr5.3:12207079-12207098 | None:intergenic | 30.0% |
!! | ATGACAAAAGTTGATTTTGC+AGG | + | chr5.3:12206829-12206848 | MS.gene02412:intron | 30.0% |
!! | CTTTTGATGGTCATTGATAA+GGG | - | chr5.3:12207078-12207097 | None:intergenic | 30.0% |
!! | TGACAAAAGTTGATTTTGCA+GGG | + | chr5.3:12206830-12206849 | MS.gene02412:intron | 30.0% |
AAAGACTCTACAACCAAACT+GGG | + | chr5.3:12207582-12207601 | MS.gene02412:CDS | 35.0% | |
AGACTAGAAGAGAAAAAAGC+AGG | - | chr5.3:12206373-12206392 | None:intergenic | 35.0% | |
AGAGAATCTCTTCTTCCTAA+AGG | - | chr5.3:12207158-12207177 | None:intergenic | 35.0% | |
ATAACAAGTGACTGCAATTG+TGG | - | chr5.3:12206679-12206698 | None:intergenic | 35.0% | |
ATACCTTGACAAAACAGTCA+TGG | - | chr5.3:12206556-12206575 | None:intergenic | 35.0% | |
ATGAGTTGTATATTGGGTGT+TGG | + | chr5.3:12206762-12206781 | MS.gene02412:intron | 35.0% | |
CAAATCCTCTAGCTGAATTA+CGG | - | chr5.3:12206922-12206941 | None:intergenic | 35.0% | |
CAAGAACTTATTGACCAACA+AGG | + | chr5.3:12207739-12207758 | MS.gene02412:CDS | 35.0% | |
CACGAATCATCGTAAAATTG+AGG | - | chr5.3:12206443-12206462 | None:intergenic | 35.0% | |
CTTGACAATCTCTTCAACTT+TGG | - | chr5.3:12206468-12206487 | None:intergenic | 35.0% | |
GCATTAGAGTAGAAAACAAG+AGG | - | chr5.3:12207056-12207075 | None:intergenic | 35.0% | |
GGAAACATTACTCCTTTAAC+AGG | + | chr5.3:12207884-12207903 | MS.gene02412:CDS | 35.0% | |
TACTCCTTTAACAGGATCAA+GGG | + | chr5.3:12207892-12207911 | MS.gene02412:CDS | 35.0% | |
TTACTCCTTTAACAGGATCA+AGG | + | chr5.3:12207891-12207910 | MS.gene02412:CDS | 35.0% | |
TTAGGAAGAAGAGATTCTCT+TGG | + | chr5.3:12207158-12207177 | MS.gene02412:CDS | 35.0% | |
! | GGTTTGGAATGTATTGTTAG+GGG | - | chr5.3:12207219-12207238 | None:intergenic | 35.0% |
! | TTTCCATGACTGTTTTGTCA+AGG | + | chr5.3:12206550-12206569 | MS.gene02412:CDS | 35.0% |
! | TTTTATATATAACCGCGACG+AGG | + | chr5.3:12206623-12206642 | MS.gene02412:intron | 35.0% |
!! | AGTCTAGGACAAACAGATTT+TGG | - | chr5.3:12207685-12207704 | None:intergenic | 35.0% |
AATCAGAAAACGCTGCAGAA+AGG | + | chr5.3:12207919-12207938 | MS.gene02412:CDS | 40.0% | |
AATGTTTCCCATCTTCACCA+TGG | - | chr5.3:12207873-12207892 | None:intergenic | 40.0% | |
ACTCCTTTAACAGGATCAAG+GGG | + | chr5.3:12207893-12207912 | MS.gene02412:CDS | 40.0% | |
ATGGAAATGTAGTCTCAGCA+AGG | - | chr5.3:12206537-12206556 | None:intergenic | 40.0% | |
ATTCAATCCTTTCAGACTGG+TGG | + | chr5.3:12207116-12207135 | MS.gene02412:intron | 40.0% | |
CAAAGACTCTACAACCAAAC+TGG | + | chr5.3:12207581-12207600 | MS.gene02412:CDS | 40.0% | |
CATCGTAAAATTGAGGGTAG+AGG | - | chr5.3:12206436-12206455 | None:intergenic | 40.0% | |
CTGCAACACAATCTATATCG+CGG | - | chr5.3:12207396-12207415 | None:intergenic | 40.0% | |
GAACAATCATCAGCGAAAAG+AGG | + | chr5.3:12206885-12206904 | MS.gene02412:CDS | 40.0% | |
GTTGATCTAGTTGCTCTATC+TGG | + | chr5.3:12207275-12207294 | MS.gene02412:CDS | 40.0% | |
TGAACAATTTGCCAAGTCCA+TGG | + | chr5.3:12207853-12207872 | MS.gene02412:CDS | 40.0% | |
TTATGCCACTGATGCAACTA+CGG | - | chr5.3:12207498-12207517 | None:intergenic | 40.0% | |
! | GCAATTGAGCTGCATAGTTT+TGG | - | chr5.3:12207634-12207653 | None:intergenic | 40.0% |
! | GTAGAGTCTTTGTCTAAAGC+TGG | - | chr5.3:12207573-12207592 | None:intergenic | 40.0% |
AGAACTTAGGAGACCCTTGT+TGG | - | chr5.3:12207756-12207775 | None:intergenic | 45.0% | |
ATCAGCACAAGAGACTGTCT+GGG | - | chr5.3:12206987-12207006 | None:intergenic | 45.0% | |
CAATTGTGGCCACATCGTTA+AGG | - | chr5.3:12206665-12206684 | None:intergenic | 45.0% | |
CCAAACCGTAATTCAGCTAG+AGG | + | chr5.3:12206914-12206933 | MS.gene02412:CDS | 45.0% | |
CCTCTAGCTGAATTACGGTT+TGG | - | chr5.3:12206917-12206936 | None:intergenic | 45.0% | |
CTCTACAACCAAACTGGGAA+TGG | + | chr5.3:12207587-12207606 | MS.gene02412:CDS | 45.0% | |
GTTATAGGTAGCCACACCAT+AGG | + | chr5.3:12207533-12207552 | MS.gene02412:intron | 45.0% | |
TATCAGCACAAGAGACTGTC+TGG | - | chr5.3:12206988-12207007 | None:intergenic | 45.0% | |
TCACCCCTTGATCCTGTTAA+AGG | - | chr5.3:12207899-12207918 | None:intergenic | 45.0% | |
TGGAATGTATTGTTAGGGGC+AGG | - | chr5.3:12207215-12207234 | None:intergenic | 45.0% | |
TGTCAAGTCCGTAGTTGCTA+AGG | + | chr5.3:12206481-12206500 | MS.gene02412:CDS | 45.0% | |
TGTCCTAGACTTTGTCACAC+CGG | + | chr5.3:12207694-12207713 | MS.gene02412:CDS | 45.0% | |
TTACCGGTGTGACAAAGTCT+AGG | - | chr5.3:12207700-12207719 | None:intergenic | 45.0% | |
TTCTTCCGTAGTTGCATCAG+TGG | + | chr5.3:12207490-12207509 | MS.gene02412:intron | 45.0% | |
TTTGGTCTCCACCAGATCTT+GGG | - | chr5.3:12207667-12207686 | None:intergenic | 45.0% | |
! | CCAAGTTGGGATGTACCTTT+AGG | + | chr5.3:12207140-12207159 | MS.gene02412:CDS | 45.0% |
! | CCTAAAGGTACATCCCAACT+TGG | - | chr5.3:12207143-12207162 | None:intergenic | 45.0% |
! | TCAGTGTTGCTAGATAGCAG+TGG | + | chr5.3:12206863-12206882 | MS.gene02412:CDS | 45.0% |
! | TCTCTTGGTGCAAGCATAAG+TGG | + | chr5.3:12207173-12207192 | MS.gene02412:CDS | 45.0% |
! | TTTTGGTCTCCACCAGATCT+TGG | - | chr5.3:12207668-12207687 | None:intergenic | 45.0% |
ACTTGGTCCACCAGTCTGAA+AGG | - | chr5.3:12207126-12207145 | None:intergenic | 50.0% | |
AGCGACAGCCTTAGCAACTA+CGG | - | chr5.3:12206492-12206511 | None:intergenic | 50.0% | |
ATGCAGCTCAATTGCGCACT+CGG | + | chr5.3:12207639-12207658 | MS.gene02412:CDS | 50.0% | |
GCCAAGTCCATGGTGAAGAT+GGG | + | chr5.3:12207863-12207882 | MS.gene02412:CDS | 50.0% | |
GGGACACTCTTTCTCTACAG+CGG | - | chr5.3:12206966-12206985 | None:intergenic | 50.0% | |
TCAGCACAAGAGACTGTCTG+GGG | - | chr5.3:12206986-12207005 | None:intergenic | 50.0% | |
TCCCATCTTCACCATGGACT+TGG | - | chr5.3:12207867-12207886 | None:intergenic | 50.0% | |
TGCCAAGTCCATGGTGAAGA+TGG | + | chr5.3:12207862-12207881 | MS.gene02412:CDS | 50.0% | |
TTATGTGTCTGACCTCGTCG+CGG | - | chr5.3:12206638-12206657 | None:intergenic | 50.0% | |
! | CTGACTTGCCATTCCCAGTT+TGG | - | chr5.3:12207598-12207617 | None:intergenic | 50.0% |
! | TCAGACTGGTGGACCAAGTT+GGG | + | chr5.3:12207127-12207146 | MS.gene02412:intron | 50.0% |
! | TTCAGACTGGTGGACCAAGT+TGG | + | chr5.3:12207126-12207145 | MS.gene02412:intron | 50.0% |
ACCGCGAATCTCCTATGGTG+TGG | - | chr5.3:12207547-12207566 | None:intergenic | 55.0% | |
GCCACACCATAGGAGATTCG+CGG | + | chr5.3:12207543-12207562 | MS.gene02412:CDS | 55.0% | |
TCAGCAAGGAAGCAGCCATG+CGG | - | chr5.3:12206523-12206542 | None:intergenic | 55.0% | |
TGTCGCTAAAGAACCCCGCA+TGG | + | chr5.3:12206505-12206524 | MS.gene02412:CDS | 55.0% | |
AGCAAGGAAGCAGCCATGCG+GGG | - | chr5.3:12206521-12206540 | None:intergenic | 60.0% | |
CAGCAAGGAAGCAGCCATGC+GGG | - | chr5.3:12206522-12206541 | None:intergenic | 60.0% | |
GGTGCACCGCGAATCTCCTA+TGG | - | chr5.3:12207552-12207571 | None:intergenic | 60.0% | |
!! | ACTCGGTGCCCAAGATCTGG+TGG | + | chr5.3:12207656-12207675 | MS.gene02412:CDS | 60.0% |
!! | CGCACTCGGTGCCCAAGATC+TGG | + | chr5.3:12207653-12207672 | MS.gene02412:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5.3 | gene | 12206347 | 12207952 | 12206347 | ID=MS.gene02412 |
chr5.3 | mRNA | 12206347 | 12207952 | 12206347 | ID=MS.gene02412.t1;Parent=MS.gene02412 |
chr5.3 | exon | 12206347 | 12206571 | 12206347 | ID=MS.gene02412.t1.exon1;Parent=MS.gene02412.t1 |
chr5.3 | CDS | 12206347 | 12206571 | 12206347 | ID=cds.MS.gene02412.t1;Parent=MS.gene02412.t1 |
chr5.3 | exon | 12206851 | 12207042 | 12206851 | ID=MS.gene02412.t1.exon2;Parent=MS.gene02412.t1 |
chr5.3 | CDS | 12206851 | 12207042 | 12206851 | ID=cds.MS.gene02412.t1;Parent=MS.gene02412.t1 |
chr5.3 | exon | 12207131 | 12207296 | 12207131 | ID=MS.gene02412.t1.exon3;Parent=MS.gene02412.t1 |
chr5.3 | CDS | 12207131 | 12207296 | 12207131 | ID=cds.MS.gene02412.t1;Parent=MS.gene02412.t1 |
chr5.3 | exon | 12207540 | 12207952 | 12207540 | ID=MS.gene02412.t1.exon4;Parent=MS.gene02412.t1 |
chr5.3 | CDS | 12207540 | 12207952 | 12207540 | ID=cds.MS.gene02412.t1;Parent=MS.gene02412.t1 |
Gene Sequence |
Protein sequence |