AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene053958

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene053958.t1 MTR_5g049280 97.633 338 8 0 1 338 1 338 0.0 687
MS.gene053958.t1 MTR_7g072510 46.732 306 151 4 32 337 19 312 8.72e-98 292
MS.gene053958.t1 MTR_5g021060 48.000 300 152 3 38 337 35 330 1.72e-97 292
MS.gene053958.t1 MTR_3g466200 46.084 332 155 7 11 337 8 320 1.61e-96 289
MS.gene053958.t1 MTR_5g074970 47.904 334 149 9 10 337 12 326 1.25e-95 287
MS.gene053958.t1 MTR_2g084010 44.073 329 166 5 9 337 8 318 6.57e-94 282
MS.gene053958.t1 MTR_5g014100 47.267 311 153 4 33 337 26 331 7.19e-94 283
MS.gene053958.t1 MTR_8g076820 46.535 303 154 5 38 338 35 331 1.52e-93 282
MS.gene053958.t1 MTR_2g029560 45.397 315 163 4 26 337 17 325 3.33e-93 281
MS.gene053958.t1 MTR_2g084080 42.643 333 172 5 5 337 4 317 8.36e-93 279
MS.gene053958.t1 MTR_3g462850 92.199 141 11 0 198 338 10 150 1.60e-92 272
MS.gene053958.t1 MTR_3g072190 45.955 309 155 4 29 337 22 318 1.71e-92 278
MS.gene053958.t1 MTR_7g072480 43.865 326 166 5 12 337 8 316 2.43e-92 278
MS.gene053958.t1 MTR_5g083860 43.558 326 172 4 13 337 11 325 3.42e-92 278
MS.gene053958.t1 MTR_7g026990 43.844 333 161 8 9 337 12 322 4.35e-92 278
MS.gene053958.t1 MTR_2g084110 43.871 310 162 4 28 337 20 317 9.64e-92 276
MS.gene053958.t1 MTR_2g084020 44.516 310 161 5 28 337 20 318 3.08e-91 275
MS.gene053958.t1 MTR_3g094650 43.373 332 171 6 7 337 7 322 5.01e-91 275
MS.gene053958.t1 MTR_4g029170 48.387 310 140 8 33 337 27 321 7.74e-91 275
MS.gene053958.t1 MTR_4g122640 47.573 309 148 7 33 337 38 336 8.15e-91 275
MS.gene053958.t1 MTR_1g022970 45.902 305 162 3 33 337 46 347 8.68e-91 275
MS.gene053958.t1 MTR_2g029830 44.728 313 168 5 27 338 22 330 3.37e-90 274
MS.gene053958.t1 MTR_2g029800 45.367 313 166 5 27 338 23 331 3.40e-89 271
MS.gene053958.t1 MTR_4g125940 43.505 331 174 5 9 338 12 330 8.73e-89 270
MS.gene053958.t1 MTR_2g029750 45.231 325 169 6 14 337 14 330 3.35e-88 269
MS.gene053958.t1 MTR_2g029815 44.681 329 167 7 14 338 14 331 5.90e-88 268
MS.gene053958.t1 MTR_2g084090 44.051 311 161 5 28 337 20 318 2.03e-87 266
MS.gene053958.t1 MTR_2g040000 45.062 324 172 4 17 338 13 332 2.36e-87 266
MS.gene053958.t1 MTR_5g017850 45.603 307 160 5 32 337 26 326 3.40e-87 265
MS.gene053958.t1 MTR_2g029740 44.000 325 173 6 14 337 14 330 4.65e-87 266
MS.gene053958.t1 MTR_5g017860 45.928 307 159 5 32 337 26 326 7.75e-87 265
MS.gene053958.t1 MTR_4g029190 45.791 297 149 4 42 337 55 340 9.64e-87 265
MS.gene053958.t1 MTR_5g074760 44.611 334 167 9 7 337 3 321 6.73e-86 262
MS.gene053958.t1 MTR_4g029200 45.098 306 156 5 32 337 45 338 9.53e-86 262
MS.gene053958.t1 MTR_2g029820 43.865 326 174 6 14 338 14 331 9.87e-86 263
MS.gene053958.t1 MTR_5g074740 45.210 334 165 9 7 337 3 321 3.14e-85 260
MS.gene053958.t1 MTR_4g083710 43.226 310 165 4 30 337 24 324 3.21e-85 260
MS.gene053958.t1 MTR_4g029180 46.053 304 150 6 36 337 30 321 3.79e-85 260
MS.gene053958.t1 MTR_3g466180 44.479 326 167 5 13 337 11 323 4.12e-85 260
MS.gene053958.t1 MTR_5g074860 44.411 331 164 10 9 336 11 324 1.08e-84 259
MS.gene053958.t1 MTR_7g093370 41.593 339 183 8 3 337 44 371 1.52e-84 260
MS.gene053958.t1 MTR_2g084000 43.137 306 163 3 32 337 25 319 1.77e-84 258
MS.gene053958.t1 MTR_2g029910 42.331 326 179 5 14 338 16 333 1.99e-84 259
MS.gene053958.t1 MTR_5g074710 46.278 309 152 8 32 337 24 321 2.60e-84 258
MS.gene053958.t1 MTR_3g094630 42.470 332 174 6 7 337 7 322 6.41e-84 257
MS.gene053958.t1 MTR_3g094670 41.867 332 176 6 7 337 7 322 1.40e-83 256
MS.gene053958.t1 MTR_2g028980 42.769 325 177 6 14 337 14 330 1.75e-83 257
MS.gene053958.t1 MTR_4g030890 44.695 311 162 5 28 337 95 396 2.04e-83 259
MS.gene053958.t1 MTR_4g031140 44.040 302 159 5 37 337 32 324 3.70e-83 256
MS.gene053958.t1 MTR_2g029730 43.030 330 177 6 12 337 4 326 6.47e-83 255
MS.gene053958.t1 MTR_2g029850 41.056 341 186 7 1 337 1 330 1.64e-82 254
MS.gene053958.t1 MTR_2g029860 42.388 335 180 6 6 337 6 330 2.83e-82 254
MS.gene053958.t1 MTR_1g054205 42.357 314 175 6 26 337 17 326 3.11e-82 253
MS.gene053958.t1 MTR_1g115900 41.033 329 176 8 11 337 9 321 7.13e-82 252
MS.gene053958.t1 MTR_3g467600 45.687 313 155 8 29 337 23 324 7.16e-81 249
MS.gene053958.t1 MTR_4g125940 46.043 278 145 4 62 338 2 275 7.08e-80 245
MS.gene053958.t1 MTR_0155s0040 42.623 305 159 7 33 337 27 315 3.02e-79 244
MS.gene053958.t1 MTR_4g074990 41.964 336 157 7 5 337 5 305 4.48e-79 244
MS.gene053958.t1 MTR_4g074995 41.290 310 158 5 30 337 21 308 1.16e-77 240
MS.gene053958.t1 MTR_8g075100 42.997 307 160 8 33 337 26 319 5.83e-77 239
MS.gene053958.t1 MTR_1g077000 42.295 305 160 7 33 337 39 327 8.84e-77 239
MS.gene053958.t1 MTR_3g072190 46.947 262 127 4 76 337 2 251 1.36e-76 236
MS.gene053958.t1 MTR_5g022870 39.818 329 179 8 10 337 6 316 6.84e-76 236
MS.gene053958.t1 MTR_1g101830 39.583 336 187 8 3 337 2 322 3.65e-75 234
MS.gene053958.t1 MTR_4g046713 39.264 326 184 8 14 337 13 326 3.85e-74 232
MS.gene053958.t1 MTR_4g074980 47.280 239 116 3 30 265 22 253 1.73e-73 228
MS.gene053958.t1 MTR_2g029830 44.656 262 140 5 78 338 5 262 2.71e-73 228
MS.gene053958.t1 MTR_1g025980 40.789 304 170 5 33 336 24 317 6.87e-72 226
MS.gene053958.t1 MTR_4g074980 39.557 316 140 6 30 337 22 294 4.64e-69 218
MS.gene053958.t1 MTR_1g086320 41.325 317 171 7 28 337 25 333 7.70e-69 218
MS.gene053958.t1 MTR_2g088770 38.019 313 183 9 28 337 21 325 8.68e-69 218
MS.gene053958.t1 MTR_3g092990 38.554 332 194 5 8 338 5 327 1.21e-68 218
MS.gene053958.t1 MTR_2g008710 41.311 305 163 9 38 337 32 325 5.10e-68 216
MS.gene053958.t1 MTR_4g114210 40.190 316 172 9 28 337 16 320 8.69e-68 215
MS.gene053958.t1 MTR_4g133800 38.689 305 173 6 34 337 42 333 2.67e-67 214
MS.gene053958.t1 MTR_4g087965 37.908 306 182 5 32 333 41 342 1.24e-64 208
MS.gene053958.t1 MTR_1g038680 40.461 304 172 7 38 337 34 332 1.25e-64 207
MS.gene053958.t1 MTR_1g090760 37.662 308 184 6 29 333 24 326 1.67e-64 207
MS.gene053958.t1 MTR_1g086490 39.077 325 174 8 28 337 25 340 4.11e-64 207
MS.gene053958.t1 MTR_5g074860 37.462 331 148 8 9 336 11 285 7.13e-64 204
MS.gene053958.t1 MTR_2g437770 39.216 306 171 7 33 337 50 341 3.78e-63 204
MS.gene053958.t1 MTR_4g132490 32.432 333 211 4 5 337 9 327 5.17e-62 201
MS.gene053958.t1 MTR_2g099175 36.593 317 178 10 30 337 33 335 1.85e-60 197
MS.gene053958.t1 MTR_7g086870 35.065 308 181 8 33 338 22 312 2.23e-60 196
MS.gene053958.t1 MTR_0286s0010 36.336 333 192 8 9 337 18 334 3.36e-60 196
MS.gene053958.t1 MTR_6g008075 36.336 333 192 8 9 337 18 334 3.36e-60 196
MS.gene053958.t1 MTR_7g107520 36.119 335 191 11 8 337 4 320 2.32e-59 194
MS.gene053958.t1 MTR_6g043280 35.328 351 190 11 1 338 7 333 2.47e-59 194
MS.gene053958.t1 MTR_8g062780 35.577 312 192 7 29 337 19 324 5.83e-59 193
MS.gene053958.t1 MTR_6g043240 36.070 341 194 10 3 337 9 331 4.22e-58 191
MS.gene053958.t1 MTR_1g009750 36.624 314 180 9 32 337 26 328 1.57e-57 189
MS.gene053958.t1 MTR_5g016010 33.634 333 206 9 9 336 6 328 6.52e-57 187
MS.gene053958.t1 MTR_2g078280 36.478 318 165 8 33 318 76 388 1.13e-56 189
MS.gene053958.t1 MTR_2g077990 36.036 333 175 9 33 333 76 402 2.22e-56 189
MS.gene053958.t1 MTR_2g067440 35.843 332 174 11 33 333 60 383 2.29e-56 188
MS.gene053958.t1 MTR_2g078610 36.036 333 175 9 33 333 76 402 2.93e-56 188
MS.gene053958.t1 MTR_7g029030 35.435 333 195 9 8 337 5 320 4.97e-56 185
MS.gene053958.t1 MTR_2g008160 38.037 326 165 11 28 337 19 323 6.26e-56 185
MS.gene053958.t1 MTR_3g092990 35.843 332 192 6 8 338 5 316 7.78e-56 184
MS.gene053958.t1 MTR_6g043460 36.254 331 194 7 7 333 7 324 8.73e-56 185
MS.gene053958.t1 MTR_6g027440 35.780 327 189 8 14 337 6 314 1.07e-55 184
MS.gene053958.t1 MTR_7g086820 34.295 312 179 9 33 337 20 312 1.17e-55 184
MS.gene053958.t1 MTR_4g127670 35.294 306 185 8 32 333 23 319 4.25e-51 172
MS.gene053958.t1 MTR_1g066380 32.039 309 198 5 32 338 26 324 1.43e-50 171
MS.gene053958.t1 MTR_4g095450 33.762 311 191 7 27 333 21 320 2.14e-50 171
MS.gene053958.t1 MTR_2g008730 40.000 255 141 7 88 337 54 301 5.77e-50 169
MS.gene053958.t1 MTR_4g132110 31.429 315 198 6 28 337 27 328 4.10e-49 167
MS.gene053958.t1 MTR_1g066640 31.715 309 199 5 32 338 26 324 5.09e-49 167
MS.gene053958.t1 MTR_5g033470 35.275 309 182 10 38 337 78 377 5.72e-49 168
MS.gene053958.t1 MTR_5g074700 45.339 236 99 11 106 337 5 214 6.99e-49 163
MS.gene053958.t1 MTR_1g066710 32.581 310 195 7 32 338 26 324 7.95e-49 166
MS.gene053958.t1 MTR_3g105790 33.631 336 199 8 7 337 6 322 1.48e-48 166
MS.gene053958.t1 MTR_1g009750 33.974 312 174 10 32 337 26 311 4.88e-47 161
MS.gene053958.t1 MTR_4g132110 30.938 320 198 7 28 337 27 333 6.91e-47 162
MS.gene053958.t1 MTR_2g008160 34.462 325 143 10 28 337 19 288 4.60e-46 158
MS.gene053958.t1 MTR_1g066680 31.975 319 184 9 32 338 26 323 8.80e-46 159
MS.gene053958.t1 MTR_0147s0010 32.399 321 178 7 33 333 77 378 7.06e-44 155
MS.gene053958.t1 MTR_2g008160 42.541 181 92 4 28 204 19 191 3.66e-43 148
MS.gene053958.t1 MTR_3g072210 42.051 195 103 4 143 337 54 238 1.11e-42 148
MS.gene053958.t1 MTR_7g072490 36.402 239 87 3 79 317 2 175 3.11e-42 146
MS.gene053958.t1 MTR_2g067450 32.698 315 185 10 33 336 11 309 1.05e-41 147
MS.gene053958.t1 MTR_1g066380 32.197 264 167 5 77 338 3 256 1.54e-40 143
MS.gene053958.t1 MTR_3g072260 47.059 136 70 1 6 141 1 134 1.01e-35 127
MS.gene053958.t1 MTR_2g029880 38.265 196 104 7 145 338 9 189 3.00e-33 122
MS.gene053958.t1 MTR_3g105790 35.000 240 143 5 103 337 15 246 1.33e-31 119
MS.gene053958.t1 MTR_2g078560 28.261 230 123 8 138 333 95 316 3.90e-21 92.8
MS.gene053958.t1 MTR_7g086790 37.500 120 71 2 80 199 17 132 1.55e-20 88.2
MS.gene053958.t1 MTR_6g048160 56.944 72 27 2 72 143 22 89 5.08e-20 84.0
MS.gene053958.t1 MTR_4g114220 48.148 81 32 2 60 140 30 100 2.83e-18 80.5
MS.gene053958.t1 MTR_1g089005 41.228 114 60 2 38 145 20 132 5.50e-18 80.1
MS.gene053958.t1 MTR_4g031040 29.885 174 75 5 94 266 3 130 3.48e-14 69.3
MS.gene053958.t1 MTR_5g074770 41.304 92 51 3 245 336 20 108 6.64e-14 67.4
MS.gene053958.t1 MTR_7g086785 33.654 104 65 2 78 178 3 105 1.26e-12 64.7
MS.gene053958.t1 MTR_7g086810 31.092 119 56 1 33 151 6 98 1.76e-12 66.6
MS.gene053958.t1 MTR_2g029930 36.170 94 35 2 29 111 15 94 1.42e-11 60.8
MS.gene053958.t1 MTR_5g058120 30.357 168 97 5 168 333 6 155 3.13e-11 63.2
MS.gene053958.t1 MTR_1g098320 37.805 82 47 2 256 337 47 124 7.29e-11 60.1
MS.gene053958.t1 MTR_4g012865 40.278 72 43 0 33 104 77 148 8.96e-11 60.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene053958.t1 AT1G68850 71.661 307 86 1 33 338 30 336 5.19e-171 479
MS.gene053958.t1 AT4G36430 48.344 302 152 3 37 338 34 331 3.37e-102 304
MS.gene053958.t1 AT2G18150 48.000 300 152 3 38 337 41 336 3.74e-100 299
MS.gene053958.t1 AT2G18140 47.682 302 154 3 36 337 38 335 1.22e-96 290
MS.gene053958.t1 AT4G16270 49.502 301 144 5 38 337 55 348 1.16e-94 285
MS.gene053958.t1 AT1G44970 47.667 300 154 3 38 337 50 346 1.40e-94 285
MS.gene053958.t1 AT5G19890 47.284 313 148 8 30 337 27 327 1.76e-94 284
MS.gene053958.t1 AT3G50990 44.839 310 167 3 28 337 36 341 1.02e-93 283
MS.gene053958.t1 AT5G05340 45.110 317 161 6 22 337 20 324 7.33e-93 280
MS.gene053958.t1 AT2G38380 45.338 311 164 6 29 337 27 333 1.42e-87 267
MS.gene053958.t1 AT5G06720 41.212 330 184 6 9 337 13 333 1.48e-87 266
MS.gene053958.t1 AT2G22420 45.333 300 156 3 38 337 28 319 4.70e-87 265
MS.gene053958.t1 AT2G35380 43.402 341 173 6 7 337 5 335 4.76e-87 265
MS.gene053958.t1 AT5G58400 43.544 333 168 7 7 337 11 325 5.26e-87 265
MS.gene053958.t1 AT3G32980 45.192 312 166 5 29 338 27 335 5.40e-87 266
MS.gene053958.t1 AT5G66390 41.720 314 179 3 24 337 24 333 5.72e-87 265
MS.gene053958.t1 AT5G06730 40.303 330 187 6 9 337 14 334 8.33e-87 265
MS.gene053958.t1 AT2G38390 43.408 311 170 6 29 337 27 333 4.12e-86 263
MS.gene053958.t1 AT5G58390 43.373 332 168 7 8 337 3 316 1.28e-85 261
MS.gene053958.t1 AT3G49120 43.590 312 171 5 29 338 28 336 1.14e-84 260
MS.gene053958.t1 AT3G49110 42.949 312 173 5 29 338 29 337 2.41e-82 254
MS.gene053958.t1 AT4G08770 42.308 312 175 5 29 338 20 328 2.59e-82 253
MS.gene053958.t1 AT1G14540 41.987 312 165 4 29 337 17 315 4.70e-82 252
MS.gene053958.t1 AT4G08780 41.667 312 177 5 29 338 20 328 1.63e-81 251
MS.gene053958.t1 AT1G14550 42.949 312 161 7 30 337 23 321 1.43e-80 248
MS.gene053958.t1 AT1G49570 42.581 310 164 5 32 335 47 348 5.38e-80 248
MS.gene053958.t1 AT5G19880 43.109 341 171 9 6 337 3 329 6.52e-77 239
MS.gene053958.t1 AT2G41480 40.118 339 183 9 5 337 4 328 1.26e-74 233
MS.gene053958.t1 AT4G11290 39.423 312 180 7 29 337 21 326 7.87e-73 229
MS.gene053958.t1 AT5G51890 41.479 311 170 8 29 337 22 322 4.20e-72 226
MS.gene053958.t1 AT4G33420 38.739 333 178 9 6 337 18 325 5.67e-71 224
MS.gene053958.t1 AT1G05260 37.742 310 186 6 30 338 23 326 9.00e-71 223
MS.gene053958.t1 AT4G33420 38.739 333 178 9 6 337 65 372 2.96e-70 223
MS.gene053958.t1 AT5G64120 41.528 301 163 8 38 337 40 328 7.60e-69 218
MS.gene053958.t1 AT1G71695 38.387 310 174 7 33 338 44 340 3.85e-68 218
MS.gene053958.t1 AT5G42180 39.145 304 175 5 33 336 23 316 9.33e-67 213
MS.gene053958.t1 AT3G03670 39.355 310 174 7 32 337 22 321 1.74e-65 209
MS.gene053958.t1 AT3G21770 36.452 310 188 7 26 333 22 324 7.23e-65 208
MS.gene053958.t1 AT5G40150 37.267 322 172 9 27 337 26 328 7.41e-65 208
MS.gene053958.t1 AT2G34060 37.419 310 180 5 32 334 41 343 2.20e-64 207
MS.gene053958.t1 AT3G28200 37.621 311 181 5 29 337 17 316 4.98e-64 206
MS.gene053958.t1 AT5G39580 40.728 302 165 9 38 337 30 319 8.62e-64 205
MS.gene053958.t1 AT2G35380 44.177 249 128 3 95 337 4 247 3.09e-63 201
MS.gene053958.t1 AT1G05240 37.898 314 177 9 31 337 23 325 6.93e-63 203
MS.gene053958.t1 AT1G05250 37.898 314 177 9 31 337 23 325 6.93e-63 203
MS.gene053958.t1 AT4G17690 36.909 317 178 6 28 337 21 322 2.02e-62 202
MS.gene053958.t1 AT5G17820 38.111 307 173 9 32 337 23 313 5.78e-62 200
MS.gene053958.t1 AT5G47000 37.987 308 178 7 33 337 33 330 2.71e-61 199
MS.gene053958.t1 AT5G15180 36.686 338 192 11 6 337 8 329 3.33e-61 199
MS.gene053958.t1 AT5G17820 38.111 307 173 9 32 337 76 366 1.07e-60 199
MS.gene053958.t1 AT4G33870 33.243 367 192 10 3 333 48 397 7.23e-60 197
MS.gene053958.t1 AT5G64110 38.264 311 176 8 31 337 32 330 9.94e-60 195
MS.gene053958.t1 AT3G01190 37.273 330 183 11 12 337 12 321 2.19e-59 194
MS.gene053958.t1 AT5G14130 34.146 328 202 8 14 337 13 330 3.20e-58 191
MS.gene053958.t1 AT5G64100 38.816 304 168 9 38 337 42 331 6.12e-58 190
MS.gene053958.t1 AT5G14130 34.146 328 202 8 14 337 54 371 8.23e-58 191
MS.gene053958.t1 AT1G30870 38.710 310 172 9 33 338 51 346 3.73e-57 189
MS.gene053958.t1 AT4G37530 36.102 313 182 6 29 333 23 325 1.58e-56 187
MS.gene053958.t1 AT1G24110 36.039 308 185 6 30 333 19 318 2.12e-56 186
MS.gene053958.t1 AT4G25980 35.897 312 182 9 33 337 26 326 5.33e-56 185
MS.gene053958.t1 AT1G77100 35.629 334 191 12 10 337 4 319 1.14e-55 184
MS.gene053958.t1 AT4G37520 34.839 310 184 6 32 333 26 325 2.06e-55 184
MS.gene053958.t1 AT4G21960 33.439 314 191 6 29 337 27 327 4.11e-55 183
MS.gene053958.t1 AT2G24800 36.218 312 181 6 32 337 30 329 7.84e-55 182
MS.gene053958.t1 AT4G31760 34.242 330 201 7 10 337 11 326 1.98e-54 181
MS.gene053958.t1 AT4G26010 34.251 327 188 9 14 337 7 309 4.73e-54 180
MS.gene053958.t1 AT2G39040 36.593 317 183 7 30 337 43 350 5.03e-54 181
MS.gene053958.t1 AT4G26010 34.251 327 188 9 14 337 35 337 1.34e-53 179
MS.gene053958.t1 AT2G43480 34.870 347 196 11 9 337 1 335 2.23e-53 179
MS.gene053958.t1 AT4G37520 34.194 310 183 7 32 333 26 322 8.46e-53 177
MS.gene053958.t1 AT2G18980 35.202 321 172 9 32 337 24 323 8.71e-52 174
MS.gene053958.t1 AT4G37530 38.023 263 149 4 29 283 23 279 2.47e-51 172
MS.gene053958.t1 AT3G49960 34.049 326 203 7 14 333 6 325 3.39e-51 173
MS.gene053958.t1 AT4G30170 33.861 316 183 6 32 337 26 325 4.21e-51 172
MS.gene053958.t1 AT5G22410 35.831 307 182 9 32 334 27 322 8.46e-51 172
MS.gene053958.t1 AT2G37130 32.581 310 194 7 32 337 29 327 1.82e-49 168
MS.gene053958.t1 AT3G17070 31.642 335 210 7 11 337 16 339 2.36e-49 168
MS.gene053958.t1 AT2G37130 32.573 307 192 7 35 337 1 296 5.95e-49 166
MS.gene053958.t1 AT5G24070 34.194 310 183 10 37 337 38 335 7.93e-49 167
MS.gene053958.t1 AT1G34510 35.065 308 179 8 32 337 21 309 1.01e-48 166
MS.gene053958.t1 AT5G67400 32.353 306 197 7 32 333 26 325 1.62e-48 166
MS.gene053958.t1 AT5G39580 46.341 164 83 3 38 201 30 188 4.14e-41 144
MS.gene053958.t1 AT4G25980 39.535 172 100 2 29 200 67 234 1.49e-39 141
MS.gene053958.t1 AT2G24800 41.667 168 94 1 32 199 30 193 5.58e-36 130
MS.gene053958.t1 AT3G17070 31.365 271 166 8 75 337 18 276 2.49e-34 127
MS.gene053958.t1 AT3G42570 36.842 95 59 1 105 198 53 147 2.44e-13 67.4

Find 65 sgRNAs with CRISPR-Local

Find 139 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCTGATTCAATGGTCAAAA+TGG 0.150346 5.3:+40975857 MS.gene053958:CDS
TAGGCCTTGATAAAGAAATT+TGG 0.197512 5.3:-40974744 None:intergenic
GATGATACATACACACTTAA+AGG 0.209734 5.3:+40974369 MS.gene053958:CDS
TTCTATCAGTTACTATTAAA+AGG 0.244929 5.3:+40975723 MS.gene053958:CDS
CTTCCATGACTGCTTTATTC+AGG 0.245006 5.3:+40973874 MS.gene053958:CDS
TTGGTGGACAAATAGATTTC+AGG 0.248040 5.3:-40975635 None:intergenic
ACCAACATCCACTCTTTAAA+AGG 0.265822 5.3:+40974408 MS.gene053958:CDS
GCTTCATCACTGGAGAAATT+AGG 0.312437 5.3:+40975901 MS.gene053958:CDS
AAATCTATTTGTCCACCAAT+TGG 0.335126 5.3:+40975639 MS.gene053958:CDS
TTCATCAGGTGTTGGAAGAT+TGG 0.344913 5.3:-40974702 None:intergenic
CCATTGAATCAGAGAATTGC+TGG 0.348685 5.3:-40975848 None:intergenic
AGGCCTTGATAAAGAAATTT+GGG 0.352606 5.3:-40974743 None:intergenic
GGCTAGAGATGCTGTAATTC+TGG 0.365262 5.3:+40974515 MS.gene053958:CDS
AATCTATTTGTCCACCAATT+GGG 0.367894 5.3:+40975640 MS.gene053958:CDS
TGTAGGTTGGTGGACCATAT+TGG 0.381231 5.3:+40974624 MS.gene053958:intron
TTGAACTGATTGTCTGAGAT+TGG 0.384305 5.3:-40975609 None:intergenic
ATTCCCAAATTTCTTTATCA+AGG 0.393262 5.3:+40974740 MS.gene053958:CDS
CTACTGTGTTTGACATTGTT+AGG 0.395693 5.3:+40973789 MS.gene053958:CDS
GTAGGTTGGTGGACCATATT+GGG 0.400494 5.3:+40974625 MS.gene053958:intron
CCAGCAATTCTCTGATTCAA+TGG 0.417000 5.3:+40975848 MS.gene053958:CDS
AGGCCTATCAGTCACGGATA+TGG 0.421834 5.3:+40974760 MS.gene053958:CDS
CAACCATATCCGTGACTGAT+AGG 0.423843 5.3:-40974763 None:intergenic
ACGGATATGGTTGCCCTTGT+CGG 0.453404 5.3:+40974773 MS.gene053958:CDS
AAAGAATTGTCGAAGAGATT+AGG 0.456399 5.3:-40975702 None:intergenic
GTAACGCAGCCTCGGTTGTT+CGG 0.456843 5.3:+40973846 MS.gene053958:CDS
CCCACAGGAACATCCCAATA+TGG 0.467663 5.3:-40974638 None:intergenic
TCTGATTCAATGGTCAAAAT+GGG 0.468708 5.3:+40975858 MS.gene053958:CDS
TGACATTGTTAGGAAGCAAA+TGG 0.473769 5.3:+40973799 MS.gene053958:CDS
ATCTATTTGTCCACCAATTG+GGG 0.476877 5.3:+40975641 MS.gene053958:CDS
GAAATGTACTCGAGTGTGTT+CGG 0.477719 5.3:+40975771 MS.gene053958:CDS
TAGGAAGCAAATGGAATGTT+CGG 0.486422 5.3:+40973808 MS.gene053958:CDS
ATAGAAACAAGGCTTTCATC+AGG 0.515660 5.3:-40974716 None:intergenic
ACAAGGCTTTCATCAGGTGT+TGG 0.523953 5.3:-40974710 None:intergenic
AATTCAGAAAGCTTCATCAC+TGG 0.525241 5.3:+40975891 MS.gene053958:CDS
ATCAGGTGTTGGAAGATTGG+TGG 0.526275 5.3:-40974699 None:intergenic
TCAGCACAAGAAACAACTCC+AGG 0.529028 5.3:-40974477 None:intergenic
TGAACCTCGTAACGCAGCCT+CGG 0.534467 5.3:+40973838 MS.gene053958:CDS
AGACCTGAATAAAGCAGTCA+TGG 0.539942 5.3:-40973877 None:intergenic
TTTGTTGAATCAGAGTGCCC+TGG 0.544131 5.3:+40974459 MS.gene053958:CDS
TGTTCAGGGTTGCGATGGAT+CGG 0.545298 5.3:+40974338 MS.gene053958:intron
TGCTGATATTCTCACAATTG+CGG 0.553704 5.3:+40974494 MS.gene053958:CDS
TTGACACCTTGCCATACCAA+TGG 0.555332 5.3:-40975535 None:intergenic
TTATGTGTTCAGGGTTGCGA+TGG 0.568814 5.3:+40974333 MS.gene053958:intron
CATGCAGGATCCCACACCAT+TGG 0.575994 5.3:+40975519 MS.gene053958:intron
AGGATCCCACACCATTGGTA+TGG 0.577138 5.3:+40975524 MS.gene053958:intron
ATTGGGATGTTCCTGTGGGA+AGG 0.579787 5.3:+40974642 MS.gene053958:CDS
AGACAATAACATAACAGCAA+TGG 0.581171 5.3:+40975668 MS.gene053958:CDS
ACCATATTGGGATGTTCCTG+TGG 0.584136 5.3:+40974637 MS.gene053958:CDS
TTATCAAGGCCTATCAGTCA+CGG 0.585184 5.3:+40974754 MS.gene053958:CDS
AATAAGAAACATACCGACAA+GGG 0.588494 5.3:-40974786 None:intergenic
TCAGTTACTATTAAAAGGCG+AGG 0.588718 5.3:+40975728 MS.gene053958:CDS
ACAGAATCTTTCCTTCCCAC+AGG 0.589625 5.3:-40974653 None:intergenic
CCCACACCATTGGTATGGCA+AGG 0.602364 5.3:+40975529 MS.gene053958:CDS
CCTTGCCATACCAATGGTGT+GGG 0.603799 5.3:-40975529 None:intergenic
CTAACAATGTCAAACACAGT+AGG 0.608651 5.3:-40973788 None:intergenic
CAGTTACTATTAAAAGGCGA+GGG 0.613439 5.3:+40975729 MS.gene053958:CDS
ACCTTGCCATACCAATGGTG+TGG 0.635221 5.3:-40975530 None:intergenic
ATTTGGGAATGATAGAAACA+AGG 0.637153 5.3:-40974727 None:intergenic
ACAACCGAGGCTGCGTTACG+AGG 0.637956 5.3:-40973842 None:intergenic
TAGTGATCAAGTGTTAGTTG+AGG 0.665046 5.3:-40973752 None:intergenic
GAAGTGAAGCCGAACAACCG+AGG 0.665422 5.3:-40973855 None:intergenic
TCTATTTGTCCACCAATTGG+GGG 0.671500 5.3:+40975642 MS.gene053958:CDS
CCATATTGGGATGTTCCTGT+GGG 0.672124 5.3:+40974638 MS.gene053958:CDS
TAATAAGAAACATACCGACA+AGG 0.676698 5.3:-40974787 None:intergenic
CAGCACAAGAAACAACTCCA+GGG 0.694829 5.3:-40974476 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTATTATTAATTTACAACTT+AGG + chr5.3:40974804-40974823 MS.gene053958:intron 10.0%
!!! TATTAGTTTGAAAAAAAAAA+TGG + chr5.3:40974993-40975012 MS.gene053958:intron 10.0%
!! AAAAATTTCAGAAGCTAATA+TGG + chr5.3:40974116-40974135 MS.gene053958:intron 20.0%
!! ATCATAGGAAAATTATATTG+TGG + chr5.3:40974840-40974859 MS.gene053958:intron 20.0%
!! ATTATTTATGCAATGCAATT+TGG - chr5.3:40975355-40975374 None:intergenic 20.0%
!! CAAATTTATCTCTCAATTAA+AGG - chr5.3:40974086-40974105 None:intergenic 20.0%
!! CTTTAATTGAGAGATAAATT+TGG + chr5.3:40974084-40974103 MS.gene053958:intron 20.0%
!! CTTTGTCTTATATAAGTTAT+TGG + chr5.3:40974570-40974589 MS.gene053958:intron 20.0%
!! TTCTATCAGTTACTATTAAA+AGG + chr5.3:40975723-40975742 MS.gene053958:CDS 20.0%
!!! AAAACAAATTTTGACAGAAA+TGG - chr5.3:40973674-40973693 None:intergenic 20.0%
!!! AATATGTCTAACTTTGAAAT+AGG - chr5.3:40973971-40973990 None:intergenic 20.0%
!!! AATTTTCGATCAAGAATATA+TGG + chr5.3:40975558-40975577 MS.gene053958:CDS 20.0%
!!! TAATGTAGCTTTACTATATT+TGG - chr5.3:40974242-40974261 None:intergenic 20.0%
!!! TTACATATTGTTCTTTTGTT+TGG + chr5.3:40973695-40973714 MS.gene053958:CDS 20.0%
! AAACAGAAGCAATAATTACA+AGG - chr5.3:40973921-40973940 None:intergenic 25.0%
! ATCAAAATGTTGAATGAAAC+AGG + chr5.3:40974172-40974191 MS.gene053958:intron 25.0%
! ATTCCCAAATTTCTTTATCA+AGG + chr5.3:40974740-40974759 MS.gene053958:CDS 25.0%
! GAATGATCATAAATCAAAGA+AGG - chr5.3:40975210-40975229 None:intergenic 25.0%
! GCAATAATTACAAGGAAAAA+AGG - chr5.3:40973913-40973932 None:intergenic 25.0%
! TGTTTGTTCTACAAAAACAA+AGG - chr5.3:40975060-40975079 None:intergenic 25.0%
!! ATTTTCTTTATCTCCTCAAT+AGG - chr5.3:40974292-40974311 None:intergenic 25.0%
!! CTATATTTGGAGTAAAACTT+AGG - chr5.3:40974229-40974248 None:intergenic 25.0%
!!! AATTACTTTTACAACTACCT+AGG - chr5.3:40975453-40975472 None:intergenic 25.0%
!!! GGTTGTGATTTAATTTTTGA+AGG + chr5.3:40974137-40974156 MS.gene053958:intron 25.0%
!!! TTTGTCCTTTGATTTTTTGT+AGG + chr5.3:40974607-40974626 MS.gene053958:intron 25.0%
AAACTTGATGTTATGTGTTC+AGG + chr5.3:40974323-40974342 MS.gene053958:intron 30.0%
AAAGAATTGTCGAAGAGATT+AGG - chr5.3:40975705-40975724 None:intergenic 30.0%
AAATCTATTTGTCCACCAAT+TGG + chr5.3:40975639-40975658 MS.gene053958:CDS 30.0%
AACTTGATGTTATGTGTTCA+GGG + chr5.3:40974324-40974343 MS.gene053958:intron 30.0%
AATAAGAAACATACCGACAA+GGG - chr5.3:40974789-40974808 None:intergenic 30.0%
AATCTATTTGTCCACCAATT+GGG + chr5.3:40975640-40975659 MS.gene053958:CDS 30.0%
AATTACACAAAACACACCAA+TGG - chr5.3:40975160-40975179 None:intergenic 30.0%
AATTTATATCGCACGCAATA+AGG - chr5.3:40975485-40975504 None:intergenic 30.0%
ACCAACCTACAAAAAATCAA+AGG - chr5.3:40974615-40974634 None:intergenic 30.0%
AGACAATAACATAACAGCAA+TGG + chr5.3:40975668-40975687 MS.gene053958:CDS 30.0%
AGGCCTTGATAAAGAAATTT+GGG - chr5.3:40974746-40974765 None:intergenic 30.0%
AGTATTAGATGAACCTATTG+AGG + chr5.3:40974276-40974295 MS.gene053958:intron 30.0%
ATTTGGGAATGATAGAAACA+AGG - chr5.3:40974730-40974749 None:intergenic 30.0%
GATGATACATACACACTTAA+AGG + chr5.3:40974369-40974388 MS.gene053958:CDS 30.0%
GGTTCATCTAATACTTTGAA+TGG - chr5.3:40974271-40974290 None:intergenic 30.0%
TAATAAGAAACATACCGACA+AGG - chr5.3:40974790-40974809 None:intergenic 30.0%
TAGGCCTTGATAAAGAAATT+TGG - chr5.3:40974747-40974766 None:intergenic 30.0%
TCTGATTCAATGGTCAAAAT+GGG + chr5.3:40975858-40975877 MS.gene053958:CDS 30.0%
TGATCATAAATCAAAGAAGG+CGG - chr5.3:40975207-40975226 None:intergenic 30.0%
TGTACAAAACAATCTGTGTA+AGG - chr5.3:40975262-40975281 None:intergenic 30.0%
TGTATATCTAAGAACCAATG+TGG + chr5.3:40974049-40974068 MS.gene053958:intron 30.0%
TTGCAATGAAAGTCAATAAC+TGG + chr5.3:40975412-40975431 MS.gene053958:intron 30.0%
! ATATTGTGGACTGTTTAGAT+AGG + chr5.3:40974854-40974873 MS.gene053958:intron 30.0%
! CACTGAGTTTCTATTTTCAA+GGG + chr5.3:40975121-40975140 MS.gene053958:intron 30.0%
! TCACTGAGTTTCTATTTTCA+AGG + chr5.3:40975120-40975139 MS.gene053958:intron 30.0%
! TTTTCAAACTAATAGCGATC+AGG - chr5.3:40974987-40975006 None:intergenic 30.0%
!! ACATTTTAGTAGAATCGGTA+CGG - chr5.3:40974002-40974021 None:intergenic 30.0%
!! ACTGAGTTTCTATTTTCAAG+GGG + chr5.3:40975122-40975141 MS.gene053958:intron 30.0%
!! AGGTATTTTTATCACCACAT+TGG - chr5.3:40974066-40974085 None:intergenic 30.0%
!! AGTTATTGACTTTCATTGCA+AGG - chr5.3:40975413-40975432 None:intergenic 30.0%
!! TACCGATTCTACTAAAATGT+CGG + chr5.3:40974002-40974021 MS.gene053958:intron 30.0%
!! TTTCAAAGCCTTTTAAAGAG+TGG - chr5.3:40974419-40974438 None:intergenic 30.0%
!!! TCCTTTGATTTTTTGTAGGT+TGG + chr5.3:40974611-40974630 MS.gene053958:intron 30.0%
!!! TTCGTGTGATTTTCAAGTAT+TGG - chr5.3:40974894-40974913 None:intergenic 30.0%
!!! TTTGATTTTTTGTAGGTTGG+TGG + chr5.3:40974614-40974633 MS.gene053958:intron 30.0%
AAAATGTCGGTCATCATCTT+CGG + chr5.3:40974015-40974034 MS.gene053958:intron 35.0%
AACTACCTAGGAATCTTATG+AGG - chr5.3:40975441-40975460 None:intergenic 35.0%
AATCACACGAAACTACAACA+AGG + chr5.3:40974903-40974922 MS.gene053958:intron 35.0%
AATTCAGAAAGCTTCATCAC+TGG + chr5.3:40975891-40975910 MS.gene053958:CDS 35.0%
ACCAACATCCACTCTTTAAA+AGG + chr5.3:40974408-40974427 MS.gene053958:CDS 35.0%
ATAGAAACAAGGCTTTCATC+AGG - chr5.3:40974719-40974738 None:intergenic 35.0%
ATCTATTTGTCCACCAATTG+GGG + chr5.3:40975641-40975660 MS.gene053958:CDS 35.0%
CAGTTACTATTAAAAGGCGA+GGG + chr5.3:40975729-40975748 MS.gene053958:CDS 35.0%
CTAACAATGTCAAACACAGT+AGG - chr5.3:40973791-40973810 None:intergenic 35.0%
CTACTGTGTTTGACATTGTT+AGG + chr5.3:40973789-40973808 MS.gene053958:CDS 35.0%
CTCACATATGAATGAGAACA+AGG + chr5.3:40975096-40975115 MS.gene053958:intron 35.0%
CTCTGATTCAATGGTCAAAA+TGG + chr5.3:40975857-40975876 MS.gene053958:CDS 35.0%
GATCATAAATCAAAGAAGGC+GGG - chr5.3:40975206-40975225 None:intergenic 35.0%
GTTCTCATTCATATGTGAGA+CGG - chr5.3:40975095-40975114 None:intergenic 35.0%
TACCACAATAATCCTCATCT+CGG + chr5.3:40975302-40975321 MS.gene053958:intron 35.0%
TAGGAAGCAAATGGAATGTT+CGG + chr5.3:40973808-40973827 MS.gene053958:CDS 35.0%
TAGTGATCAAGTGTTAGTTG+AGG - chr5.3:40973755-40973774 None:intergenic 35.0%
TCAGTTACTATTAAAAGGCG+AGG + chr5.3:40975728-40975747 MS.gene053958:CDS 35.0%
TGACATTGTTAGGAAGCAAA+TGG + chr5.3:40973799-40973818 MS.gene053958:CDS 35.0%
TGCTGATATTCTCACAATTG+CGG + chr5.3:40974494-40974513 MS.gene053958:CDS 35.0%
TTGTAGAACAAACATCCATC+AGG + chr5.3:40975066-40975085 MS.gene053958:intron 35.0%
! GGAGAAGTGTATCTTATCAT+AGG + chr5.3:40974825-40974844 MS.gene053958:intron 35.0%
! TTGAACTGATTGTCTGAGAT+TGG - chr5.3:40975612-40975631 None:intergenic 35.0%
! TTGGTGGACAAATAGATTTC+AGG - chr5.3:40975638-40975657 None:intergenic 35.0%
!! GACCGACATTTTAGTAGAAT+CGG - chr5.3:40974007-40974026 None:intergenic 35.0%
!!! GTTCTTTTGTTTGGCTTTCT+TGG + chr5.3:40973704-40973723 MS.gene053958:CDS 35.0%
AGACCTGAATAAAGCAGTCA+TGG - chr5.3:40973880-40973899 None:intergenic 40.0%
AGTAGAATCGGTACGGTAAA+TGG - chr5.3:40973995-40974014 None:intergenic 40.0%
ATTTCATTTGAGCCGAGATG+AGG - chr5.3:40975317-40975336 None:intergenic 40.0%
CCAGCAATTCTCTGATTCAA+TGG + chr5.3:40975848-40975867 MS.gene053958:CDS 40.0%
CCATTGAATCAGAGAATTGC+TGG - chr5.3:40975851-40975870 None:intergenic 40.0%
GAAATGTACTCGAGTGTGTT+CGG + chr5.3:40975771-40975790 MS.gene053958:CDS 40.0%
GCTTCATCACTGGAGAAATT+AGG + chr5.3:40975901-40975920 MS.gene053958:CDS 40.0%
GGTTTCCTCATAAGATTCCT+AGG + chr5.3:40975433-40975452 MS.gene053958:intron 40.0%
TCTATTTGTCCACCAATTGG+GGG + chr5.3:40975642-40975661 MS.gene053958:CDS 40.0%
TGCAAGGCAATGTGAAGAAA+TGG - chr5.3:40975397-40975416 None:intergenic 40.0%
TGTCTCACTCATTAAGACAG+AGG - chr5.3:40974960-40974979 None:intergenic 40.0%
TTATCAAGGCCTATCAGTCA+CGG + chr5.3:40974754-40974773 MS.gene053958:CDS 40.0%
TTTCTGATCACAACACATGC+AGG + chr5.3:40975504-40975523 MS.gene053958:intron 40.0%
! CAGAGGACTATGAGCTTTTT+CGG - chr5.3:40974943-40974962 None:intergenic 40.0%
! CTTCCATGACTGCTTTATTC+AGG + chr5.3:40973874-40973893 MS.gene053958:CDS 40.0%
! TTGTGGACTGTTTAGATAGG+TGG + chr5.3:40974857-40974876 MS.gene053958:intron 40.0%
!! GAGTTTCTATTTTCAAGGGG+CGG + chr5.3:40975125-40975144 MS.gene053958:intron 40.0%
!! GCCTTTTAAAGAGTGGATGT+TGG - chr5.3:40974412-40974431 None:intergenic 40.0%
!! TTCATCAGGTGTTGGAAGAT+TGG - chr5.3:40974705-40974724 None:intergenic 40.0%
ACAAGGCTTTCATCAGGTGT+TGG - chr5.3:40974713-40974732 None:intergenic 45.0%
ACAGAATCTTTCCTTCCCAC+AGG - chr5.3:40974656-40974675 None:intergenic 45.0%
ACCATATTGGGATGTTCCTG+TGG + chr5.3:40974637-40974656 MS.gene053958:CDS 45.0%
AGCCGAGATGAGGATTATTG+TGG - chr5.3:40975307-40975326 None:intergenic 45.0%
CAACCATATCCGTGACTGAT+AGG - chr5.3:40974766-40974785 None:intergenic 45.0%
CAGCACAAGAAACAACTCCA+GGG - chr5.3:40974479-40974498 None:intergenic 45.0%
CCATATTGGGATGTTCCTGT+GGG + chr5.3:40974638-40974657 MS.gene053958:CDS 45.0%
GGCTAGAGATGCTGTAATTC+TGG + chr5.3:40974515-40974534 MS.gene053958:CDS 45.0%
TCAGCACAAGAAACAACTCC+AGG - chr5.3:40974480-40974499 None:intergenic 45.0%
TTATGTGTTCAGGGTTGCGA+TGG + chr5.3:40974333-40974352 MS.gene053958:intron 45.0%
TTATTGTCTCCTCCCCCAAT+TGG - chr5.3:40975657-40975676 None:intergenic 45.0%
TTGACACCTTGCCATACCAA+TGG - chr5.3:40975538-40975557 None:intergenic 45.0%
! TTTGTTGAATCAGAGTGCCC+TGG + chr5.3:40974459-40974478 MS.gene053958:CDS 45.0%
!! ATCAGGTGTTGGAAGATTGG+TGG - chr5.3:40974702-40974721 None:intergenic 45.0%
!! GTAGGTTGGTGGACCATATT+GGG + chr5.3:40974625-40974644 MS.gene053958:intron 45.0%
!! TGTAGGTTGGTGGACCATAT+TGG + chr5.3:40974624-40974643 MS.gene053958:intron 45.0%
ACCTTGCCATACCAATGGTG+TGG - chr5.3:40975533-40975552 None:intergenic 50.0%
ACGGATATGGTTGCCCTTGT+CGG + chr5.3:40974773-40974792 MS.gene053958:CDS 50.0%
AGGATCCCACACCATTGGTA+TGG + chr5.3:40975524-40975543 MS.gene053958:intron 50.0%
AGGCCTATCAGTCACGGATA+TGG + chr5.3:40974760-40974779 MS.gene053958:CDS 50.0%
ATTGGGATGTTCCTGTGGGA+AGG + chr5.3:40974642-40974661 MS.gene053958:CDS 50.0%
ATTTGTCCACCAATTGGGGG+AGG + chr5.3:40975645-40975664 MS.gene053958:CDS 50.0%
CCCACAGGAACATCCCAATA+TGG - chr5.3:40974641-40974660 None:intergenic 50.0%
CCTTGCCATACCAATGGTGT+GGG - chr5.3:40975532-40975551 None:intergenic 50.0%
TATGTGAGACGGTGACCTGA+TGG - chr5.3:40975084-40975103 None:intergenic 50.0%
TGTTCAGGGTTGCGATGGAT+CGG + chr5.3:40974338-40974357 MS.gene053958:intron 50.0%
CATGCAGGATCCCACACCAT+TGG + chr5.3:40975519-40975538 MS.gene053958:intron 55.0%
CCCACACCATTGGTATGGCA+AGG + chr5.3:40975529-40975548 MS.gene053958:CDS 55.0%
GAAGTGAAGCCGAACAACCG+AGG - chr5.3:40973858-40973877 None:intergenic 55.0%
GGGGCGGCATTATTCACCAT+TGG + chr5.3:40975141-40975160 MS.gene053958:intron 55.0%
GTAACGCAGCCTCGGTTGTT+CGG + chr5.3:40973846-40973865 MS.gene053958:CDS 55.0%
TGAACCTCGTAACGCAGCCT+CGG + chr5.3:40973838-40973857 MS.gene053958:CDS 55.0%
TTGTCTCCTCCCCCAATTGG+TGG - chr5.3:40975654-40975673 None:intergenic 55.0%
ACAACCGAGGCTGCGTTACG+AGG - chr5.3:40973845-40973864 None:intergenic 60.0%


Chromosome Type Strat End Strand Name
chr5.3 gene 40973662 40975950 40973662 ID=MS.gene053958
chr5.3 mRNA 40973662 40975950 40973662 ID=MS.gene053958.t1;Parent=MS.gene053958
chr5.3 exon 40973662 40973895 40973662 ID=MS.gene053958.t1.exon1;Parent=MS.gene053958.t1
chr5.3 CDS 40973662 40973895 40973662 ID=cds.MS.gene053958.t1;Parent=MS.gene053958.t1
chr5.3 exon 40974345 40974536 40974345 ID=MS.gene053958.t1.exon2;Parent=MS.gene053958.t1
chr5.3 CDS 40974345 40974536 40974345 ID=cds.MS.gene053958.t1;Parent=MS.gene053958.t1
chr5.3 exon 40974629 40974794 40974629 ID=MS.gene053958.t1.exon3;Parent=MS.gene053958.t1
chr5.3 CDS 40974629 40974794 40974629 ID=cds.MS.gene053958.t1;Parent=MS.gene053958.t1
chr5.3 exon 40975526 40975950 40975526 ID=MS.gene053958.t1.exon4;Parent=MS.gene053958.t1
chr5.3 CDS 40975526 40975950 40975526 ID=cds.MS.gene053958.t1;Parent=MS.gene053958.t1
Gene Sequence

>MS.gene053958

ATGGATACTCCATTTCTGTCAAAATTTGTTTTTTTACATATTGTTCTTTTGTTTGGCTTTCTTGGTGACAATAGATTGTATGCAAGTGAGCCTCAACTAACACTTGATCACTATGCATCAACTTGTCCTACTGTGTTTGACATTGTTAGGAAGCAAATGGAATGTTCGGTGCTTTCTGAACCTCGTAACGCAGCCTCGGTTGTTCGGCTTCACTTCCATGACTGCTTTATTCAGGTCTCAAAAACTTGCCTTTTTTCCTTGTAATTATTGCTTCTGTTTTCATGTTAGAAAGAAAAAAGAGTAAATCCTATTTCAAAGTTAGACATATTTCCATTTACCGTACCGATTCTACTAAAATGTCGGTCATCATCTTCGGTTTTTACAAAATGTATATCTAAGAACCAATGTGGTGATAAAAATACCTTTAATTGAGAGATAAATTTGGAGATAAAATAAAAATTTCAGAAGCTAATATGGTTGTGATTTAATTTTTGAAGGACTAATTTAGTAATCAAAATGTTGAATGAAACAGGTTATGTCTGTGTATATACTTTGCAATATCAACCTAAGTTTTACTCCAAATATAGTAAAGCTACATTACATGTTCCATTCAAAGTATTAGATGAACCTATTGAGGAGATAAAGAAAATTCGTACTAAAGAAACTTGATGTTATGTGTTCAGGGTTGCGATGGATCGGTCTTGCTCGATGATACATACACACTTAAAGGTGAAAAGAAAGCAGCTACCAACATCCACTCTTTAAAAGGCTTTGAAATTATCGATCAAATCAAGAACTTTGTTGAATCAGAGTGCCCTGGAGTTGTTTCTTGTGCTGATATTCTCACAATTGCGGCTAGAGATGCTGTAATTCTGGTAAAACAAACAATATGTACAACAAAATTCAATCTTTGTCTTATATAAGTTATTGGATTTATTATATCTCTTTGTCCTTTGATTTTTTGTAGGTTGGTGGACCATATTGGGATGTTCCTGTGGGAAGGAAAGATTCTGTGACTGCAAGTTTTGAACTTGCTACCACCAATCTTCCAACACCTGATGAAAGCCTTGTTTCTATCATTCCCAAATTTCTTTATCAAGGCCTATCAGTCACGGATATGGTTGCCCTTGTCGGTATGTTTCTTATTATTAATTTACAACTTAGGAGAAGTGTATCTTATCATAGGAAAATTATATTGTGGACTGTTTAGATAGGTGGTTTACAGCAGACCAATACTTGAAAATCACACGAAACTACAACAAGGACTCACAGTACTTGCCGAAAAAGCTCATAGTCCTCTGTCTTAATGAGTGAGACAGTAACCTGATCGCTATTAGTTTGAAAAAAAAAATGGAAAAATGAATGAGTCGTCAAATCTCAACTCATATTCATTTTCCTTTGTTTTTGTAGAACAAACATCCATCAGGTCACCGTCTCACATATGAATGAGAACAAGGATCACTGAGTTTCTATTTTCAAGGGGCGGCATTATTCACCATTGGTGTGTTTTGTGTAATTTTAAAGTGTGATTCATCGTAAAACCCGCCTTCTTTGATTTATGATCATTCTAGCTAGCATATTAACTAGAGTGAGTAGACCTTACACAGATTGTTTTGTACAATTAGTACAACTCTCAGTTTTACCACAATAATCCTCATCTCGGCTCAAATGAAATGTACAAAATAACAAACCAAATTGCATTGCATAAATAATCAAAATATGAATATTTTGACCATTTCTTCACATTGCCTTGCAATGAAAGTCAATAACTGGTTTCCTCATAAGATTCCTAGGTAGTTGTAAAAGTAATTTGTAATAAACCTTATTGCGTGCGATATAAATTTTCTGATCACAACACATGCAGGATCCCACACCATTGGTATGGCAAGGTGTCAAAATTTTCGATCAAGAATATATGGAGACTATGAATCAACTTCAGTGAAAAATCCAATCTCAGACAATCAGTTCAACAACCTGAAATCTATTTGTCCACCAATTGGGGGAGGAGACAATAACATAACAGCAATGGACTATGTGACGCCTAATCTCTTCGACAATTCTTTCTATCAGTTACTATTAAAAGGCGAGGGTGTTCTTAACTCAGATCAAGAAATGTACTCGAGTGTGTTCGGAATCGAAACAAGAGAGCTTGTCAAGAAGTATGCAGTAGACTCTCTTGCTTTCTTCCAGCAATTCTCTGATTCAATGGTCAAAATGGGAAATATCACAAATTCAGAAAGCTTCATCACTGGAGAAATTAGGAAGAACTGCAGATTTGTTAACACGTAA
Protein sequence

>MS.gene053958.t1

MDTPFLSKFVFLHIVLLFGFLGDNRLYASEPQLTLDHYASTCPTVFDIVRKQMECSVLSEPRNAASVVRLHFHDCFIQGCDGSVLLDDTYTLKGEKKAATNIHSLKGFEIIDQIKNFVESECPGVVSCADILTIAARDAVILVGGPYWDVPVGRKDSVTASFELATTNLPTPDESLVSIIPKFLYQGLSVTDMVALVGSHTIGMARCQNFRSRIYGDYESTSVKNPISDNQFNNLKSICPPIGGGDNNITAMDYVTPNLFDNSFYQLLLKGEGVLNSDQEMYSSVFGIETRELVKKYAVDSLAFFQQFSDSMVKMGNITNSESFITGEIRKNCRFVNT