Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene068822.t1 | XP_013453889.1 | 92 | 264 | 4 | 1 | 1 | 247 | 53 | 316 | 4.10E-135 | 490.7 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene068822.t1 | Q96519 | 66.4 | 265 | 71 | 2 | 1 | 247 | 50 | 314 | 4.3e-101 | 369.0 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene068822.t1 | A0A072UQ08 | 92.0 | 264 | 4 | 1 | 1 | 247 | 53 | 316 | 3.0e-135 | 490.7 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049227 | MS.gene068822 | 0.802143 | 6.45E-49 | -1.69E-46 |
MS.gene053957 | MS.gene068822 | 0.932381 | 9.27E-95 | -1.69E-46 |
MS.gene053958 | MS.gene068822 | 0.949951 | 4.48E-108 | -1.69E-46 |
MS.gene053961 | MS.gene068822 | 0.971414 | 3.99E-133 | -1.69E-46 |
MS.gene058015 | MS.gene068822 | 0.849509 | 3.09E-60 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene068822 | MS.gene010565 | PPI |
MS.gene012047 | MS.gene068822 | PPI |
MS.gene068822 | MS.gene012048 | PPI |
MS.gene068822 | MS.gene64708 | PPI |
MS.gene068822 | MS.gene21483 | PPI |
MS.gene068822 | MS.gene02412 | PPI |
MS.gene068822 | MS.gene59415 | PPI |
MS.gene068822 | MS.gene09669 | PPI |
MS.gene068822 | MS.gene015325 | PPI |
MS.gene068822 | MS.gene89609 | PPI |
MS.gene068822 | MS.gene047884 | PPI |
MS.gene068822 | MS.gene047885 | PPI |
MS.gene068822 | MS.gene074595 | PPI |
MS.gene068822 | MS.gene76444 | PPI |
MS.gene068822 | MS.gene059685 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene068822.t1 | MTR_5g049280 | 92.045 | 264 | 4 | 1 | 1 | 247 | 53 | 316 | 9.56e-180 | 497 |
MS.gene068822.t1 | MTR_3g462850 | 92.437 | 119 | 9 | 0 | 129 | 247 | 10 | 128 | 2.34e-76 | 228 |
MS.gene068822.t1 | MTR_5g021060 | 44.061 | 261 | 126 | 3 | 4 | 247 | 53 | 310 | 1.64e-73 | 228 |
MS.gene068822.t1 | MTR_7g072510 | 43.446 | 267 | 123 | 4 | 1 | 250 | 40 | 295 | 9.89e-72 | 222 |
MS.gene068822.t1 | MTR_5g074970 | 46.591 | 264 | 111 | 6 | 4 | 247 | 53 | 306 | 2.57e-71 | 222 |
MS.gene068822.t1 | MTR_3g466200 | 45.113 | 266 | 117 | 5 | 1 | 247 | 45 | 300 | 4.71e-71 | 221 |
MS.gene068822.t1 | MTR_2g029560 | 42.692 | 260 | 130 | 3 | 6 | 248 | 49 | 306 | 5.88e-71 | 221 |
MS.gene068822.t1 | MTR_8g076820 | 43.346 | 263 | 125 | 5 | 4 | 247 | 53 | 310 | 9.46e-71 | 221 |
MS.gene068822.t1 | MTR_4g122640 | 45.522 | 268 | 116 | 7 | 1 | 247 | 58 | 316 | 9.46e-70 | 218 |
MS.gene068822.t1 | MTR_3g466180 | 43.939 | 264 | 117 | 6 | 3 | 247 | 52 | 303 | 1.72e-69 | 217 |
MS.gene068822.t1 | MTR_1g022970 | 43.182 | 264 | 131 | 3 | 1 | 247 | 66 | 327 | 7.01e-69 | 216 |
MS.gene068822.t1 | MTR_3g072190 | 43.846 | 260 | 118 | 4 | 4 | 246 | 49 | 297 | 8.59e-69 | 215 |
MS.gene068822.t1 | MTR_5g014100 | 42.424 | 264 | 131 | 3 | 4 | 247 | 49 | 311 | 3.13e-67 | 211 |
MS.gene068822.t1 | MTR_2g084010 | 41.132 | 265 | 129 | 4 | 1 | 248 | 45 | 299 | 3.48e-67 | 211 |
MS.gene068822.t1 | MTR_4g029190 | 43.511 | 262 | 120 | 4 | 4 | 247 | 69 | 320 | 5.48e-67 | 211 |
MS.gene068822.t1 | MTR_4g029170 | 45.113 | 266 | 116 | 7 | 1 | 247 | 47 | 301 | 7.93e-67 | 210 |
MS.gene068822.t1 | MTR_2g029830 | 42.085 | 259 | 129 | 5 | 7 | 247 | 54 | 309 | 9.95e-67 | 211 |
MS.gene068822.t1 | MTR_3g094670 | 40.377 | 265 | 130 | 5 | 1 | 247 | 48 | 302 | 1.94e-66 | 209 |
MS.gene068822.t1 | MTR_2g029800 | 43.243 | 259 | 126 | 5 | 7 | 247 | 55 | 310 | 2.00e-66 | 210 |
MS.gene068822.t1 | MTR_7g026990 | 42.146 | 261 | 122 | 5 | 4 | 247 | 54 | 302 | 3.66e-66 | 208 |
MS.gene068822.t1 | MTR_3g094630 | 40.755 | 265 | 129 | 5 | 1 | 247 | 48 | 302 | 4.56e-66 | 208 |
MS.gene068822.t1 | MTR_5g083860 | 41.509 | 265 | 127 | 4 | 1 | 247 | 51 | 305 | 4.65e-66 | 208 |
MS.gene068822.t1 | MTR_3g094650 | 41.509 | 265 | 127 | 5 | 1 | 247 | 48 | 302 | 5.19e-66 | 208 |
MS.gene068822.t1 | MTR_7g072480 | 42.529 | 261 | 122 | 4 | 4 | 247 | 47 | 296 | 1.08e-65 | 207 |
MS.gene068822.t1 | MTR_4g083710 | 40.977 | 266 | 130 | 4 | 1 | 247 | 47 | 304 | 1.49e-65 | 207 |
MS.gene068822.t1 | MTR_2g029740 | 42.857 | 259 | 127 | 5 | 7 | 247 | 55 | 310 | 1.63e-65 | 208 |
MS.gene068822.t1 | MTR_2g084080 | 39.623 | 265 | 132 | 4 | 1 | 248 | 45 | 298 | 1.76e-65 | 206 |
MS.gene068822.t1 | MTR_5g074860 | 43.182 | 264 | 120 | 8 | 4 | 247 | 52 | 305 | 3.87e-65 | 206 |
MS.gene068822.t1 | MTR_2g084020 | 40.755 | 265 | 130 | 5 | 1 | 248 | 45 | 299 | 7.14e-65 | 205 |
MS.gene068822.t1 | MTR_2g029860 | 40.541 | 259 | 135 | 3 | 7 | 248 | 55 | 311 | 1.03e-64 | 206 |
MS.gene068822.t1 | MTR_5g017850 | 41.445 | 263 | 131 | 5 | 4 | 248 | 50 | 307 | 1.09e-64 | 205 |
MS.gene068822.t1 | MTR_2g084110 | 38.951 | 267 | 135 | 4 | 1 | 250 | 45 | 300 | 2.09e-64 | 204 |
MS.gene068822.t1 | MTR_2g029815 | 42.085 | 259 | 129 | 5 | 7 | 247 | 55 | 310 | 2.73e-64 | 204 |
MS.gene068822.t1 | MTR_5g017860 | 41.825 | 263 | 130 | 5 | 4 | 248 | 50 | 307 | 3.17e-64 | 204 |
MS.gene068822.t1 | MTR_4g029200 | 43.295 | 261 | 120 | 5 | 4 | 247 | 69 | 318 | 5.51e-64 | 203 |
MS.gene068822.t1 | MTR_2g029910 | 40.769 | 260 | 134 | 4 | 7 | 248 | 56 | 313 | 7.40e-64 | 203 |
MS.gene068822.t1 | MTR_5g074740 | 43.939 | 264 | 118 | 7 | 4 | 247 | 48 | 301 | 8.78e-64 | 202 |
MS.gene068822.t1 | MTR_2g029820 | 42.248 | 258 | 128 | 5 | 8 | 247 | 56 | 310 | 9.39e-64 | 203 |
MS.gene068822.t1 | MTR_4g029180 | 43.233 | 266 | 121 | 6 | 1 | 247 | 47 | 301 | 1.04e-63 | 202 |
MS.gene068822.t1 | MTR_2g029750 | 42.471 | 259 | 128 | 5 | 7 | 247 | 55 | 310 | 1.53e-63 | 202 |
MS.gene068822.t1 | MTR_5g074760 | 43.182 | 264 | 120 | 7 | 4 | 247 | 48 | 301 | 2.91e-63 | 201 |
MS.gene068822.t1 | MTR_5g074710 | 43.561 | 264 | 119 | 7 | 4 | 247 | 48 | 301 | 6.83e-63 | 200 |
MS.gene068822.t1 | MTR_3g467600 | 43.462 | 260 | 118 | 6 | 8 | 247 | 54 | 304 | 1.78e-62 | 199 |
MS.gene068822.t1 | MTR_2g029730 | 41.154 | 260 | 132 | 5 | 7 | 248 | 51 | 307 | 4.12e-62 | 199 |
MS.gene068822.t1 | MTR_2g084090 | 39.850 | 266 | 131 | 5 | 1 | 248 | 45 | 299 | 5.61e-62 | 197 |
MS.gene068822.t1 | MTR_2g028980 | 40.310 | 258 | 133 | 5 | 8 | 247 | 56 | 310 | 1.35e-61 | 197 |
MS.gene068822.t1 | MTR_2g029850 | 39.231 | 260 | 137 | 5 | 7 | 248 | 55 | 311 | 6.89e-61 | 196 |
MS.gene068822.t1 | MTR_4g030890 | 40.647 | 278 | 141 | 5 | 1 | 260 | 120 | 391 | 1.14e-60 | 197 |
MS.gene068822.t1 | MTR_2g084000 | 39.080 | 261 | 132 | 3 | 5 | 248 | 50 | 300 | 1.89e-60 | 194 |
MS.gene068822.t1 | MTR_2g040000 | 41.699 | 259 | 129 | 4 | 8 | 247 | 56 | 311 | 2.53e-60 | 194 |
MS.gene068822.t1 | MTR_7g093370 | 37.970 | 266 | 143 | 6 | 1 | 247 | 89 | 351 | 9.62e-60 | 193 |
MS.gene068822.t1 | MTR_4g031140 | 40.377 | 265 | 134 | 5 | 1 | 247 | 48 | 306 | 1.16e-59 | 192 |
MS.gene068822.t1 | MTR_4g125940 | 40.230 | 261 | 131 | 5 | 10 | 250 | 2 | 257 | 1.99e-59 | 189 |
MS.gene068822.t1 | MTR_3g072190 | 42.917 | 240 | 109 | 4 | 24 | 246 | 2 | 230 | 2.88e-59 | 188 |
MS.gene068822.t1 | MTR_4g125940 | 40.152 | 264 | 133 | 5 | 7 | 250 | 54 | 312 | 4.64e-59 | 191 |
MS.gene068822.t1 | MTR_1g115900 | 40.076 | 262 | 127 | 7 | 4 | 246 | 50 | 300 | 5.00e-59 | 190 |
MS.gene068822.t1 | MTR_4g074995 | 38.722 | 266 | 123 | 5 | 1 | 247 | 44 | 288 | 2.49e-58 | 188 |
MS.gene068822.t1 | MTR_1g054205 | 39.080 | 261 | 137 | 6 | 7 | 248 | 50 | 307 | 5.89e-58 | 187 |
MS.gene068822.t1 | MTR_4g074990 | 39.700 | 267 | 116 | 5 | 1 | 247 | 44 | 285 | 8.36e-58 | 186 |
MS.gene068822.t1 | MTR_1g077000 | 41.085 | 258 | 120 | 7 | 7 | 247 | 65 | 307 | 1.82e-57 | 186 |
MS.gene068822.t1 | MTR_2g029830 | 40.417 | 240 | 122 | 5 | 26 | 247 | 5 | 241 | 1.27e-56 | 183 |
MS.gene068822.t1 | MTR_0155s0040 | 40.234 | 256 | 121 | 7 | 8 | 246 | 54 | 294 | 9.43e-55 | 179 |
MS.gene068822.t1 | MTR_4g074980 | 43.056 | 216 | 96 | 4 | 1 | 196 | 45 | 253 | 1.92e-54 | 176 |
MS.gene068822.t1 | MTR_5g022870 | 40.079 | 252 | 126 | 7 | 13 | 246 | 55 | 299 | 9.68e-54 | 176 |
MS.gene068822.t1 | MTR_8g075100 | 38.113 | 265 | 137 | 8 | 1 | 246 | 46 | 302 | 1.49e-52 | 173 |
MS.gene068822.t1 | MTR_1g101830 | 38.846 | 260 | 134 | 7 | 6 | 247 | 52 | 304 | 7.55e-52 | 172 |
MS.gene068822.t1 | MTR_4g046713 | 37.066 | 259 | 138 | 7 | 9 | 248 | 55 | 307 | 3.41e-51 | 170 |
MS.gene068822.t1 | MTR_2g088770 | 35.985 | 264 | 142 | 9 | 5 | 248 | 50 | 306 | 4.52e-50 | 167 |
MS.gene068822.t1 | MTR_1g025980 | 38.247 | 251 | 132 | 5 | 13 | 246 | 56 | 300 | 1.26e-49 | 166 |
MS.gene068822.t1 | MTR_1g086320 | 38.077 | 260 | 136 | 6 | 9 | 247 | 58 | 313 | 1.47e-48 | 163 |
MS.gene068822.t1 | MTR_4g074980 | 47.879 | 165 | 69 | 1 | 1 | 148 | 45 | 209 | 2.41e-48 | 162 |
MS.gene068822.t1 | MTR_3g092990 | 36.434 | 258 | 142 | 4 | 9 | 248 | 54 | 307 | 2.10e-47 | 160 |
MS.gene068822.t1 | MTR_2g008710 | 37.879 | 264 | 132 | 9 | 5 | 246 | 51 | 304 | 1.59e-46 | 158 |
MS.gene068822.t1 | MTR_1g090760 | 35.769 | 260 | 143 | 6 | 7 | 246 | 54 | 309 | 9.80e-46 | 156 |
MS.gene068822.t1 | MTR_4g114210 | 36.641 | 262 | 133 | 9 | 8 | 246 | 48 | 299 | 1.08e-45 | 155 |
MS.gene068822.t1 | MTR_4g087965 | 34.307 | 274 | 148 | 7 | 9 | 254 | 70 | 339 | 1.85e-44 | 153 |
MS.gene068822.t1 | MTR_5g074860 | 34.470 | 264 | 104 | 6 | 4 | 247 | 52 | 266 | 2.06e-44 | 151 |
MS.gene068822.t1 | MTR_1g038680 | 35.769 | 260 | 142 | 5 | 9 | 247 | 57 | 312 | 2.27e-43 | 150 |
MS.gene068822.t1 | MTR_1g086490 | 35.448 | 268 | 139 | 7 | 9 | 247 | 58 | 320 | 4.28e-43 | 149 |
MS.gene068822.t1 | MTR_4g133800 | 34.100 | 261 | 141 | 7 | 5 | 247 | 65 | 312 | 6.83e-43 | 149 |
MS.gene068822.t1 | MTR_2g437770 | 37.008 | 254 | 128 | 8 | 12 | 247 | 81 | 320 | 4.10e-42 | 147 |
MS.gene068822.t1 | MTR_7g107520 | 34.231 | 260 | 146 | 8 | 5 | 247 | 49 | 300 | 6.74e-42 | 145 |
MS.gene068822.t1 | MTR_4g132490 | 30.620 | 258 | 157 | 3 | 6 | 246 | 54 | 306 | 6.02e-41 | 144 |
MS.gene068822.t1 | MTR_8g062780 | 32.576 | 264 | 153 | 7 | 7 | 250 | 49 | 307 | 2.39e-40 | 142 |
MS.gene068822.t1 | MTR_3g072210 | 43.353 | 173 | 88 | 4 | 74 | 246 | 54 | 216 | 6.88e-40 | 138 |
MS.gene068822.t1 | MTR_2g099175 | 33.977 | 259 | 136 | 10 | 13 | 247 | 68 | 315 | 1.26e-39 | 140 |
MS.gene068822.t1 | MTR_6g043280 | 33.984 | 256 | 136 | 8 | 12 | 248 | 72 | 313 | 1.52e-39 | 140 |
MS.gene068822.t1 | MTR_1g009750 | 35.102 | 245 | 141 | 8 | 12 | 248 | 58 | 292 | 2.01e-39 | 139 |
MS.gene068822.t1 | MTR_2g078280 | 33.451 | 284 | 135 | 9 | 12 | 246 | 107 | 385 | 6.00e-39 | 140 |
MS.gene068822.t1 | MTR_2g077990 | 33.803 | 284 | 134 | 9 | 12 | 246 | 107 | 385 | 1.83e-38 | 139 |
MS.gene068822.t1 | MTR_6g043240 | 34.221 | 263 | 138 | 8 | 7 | 250 | 68 | 314 | 2.82e-38 | 137 |
MS.gene068822.t1 | MTR_2g078610 | 33.803 | 284 | 134 | 9 | 12 | 246 | 107 | 385 | 3.34e-38 | 138 |
MS.gene068822.t1 | MTR_2g067440 | 32.979 | 282 | 136 | 9 | 12 | 246 | 91 | 366 | 4.19e-38 | 137 |
MS.gene068822.t1 | MTR_5g016010 | 31.907 | 257 | 147 | 8 | 14 | 248 | 60 | 310 | 1.63e-37 | 134 |
MS.gene068822.t1 | MTR_7g086870 | 30.952 | 252 | 143 | 7 | 13 | 247 | 54 | 291 | 2.37e-37 | 134 |
MS.gene068822.t1 | MTR_7g086820 | 30.739 | 257 | 142 | 8 | 13 | 248 | 52 | 293 | 4.47e-37 | 133 |
MS.gene068822.t1 | MTR_3g092990 | 34.167 | 240 | 136 | 4 | 27 | 248 | 61 | 296 | 1.59e-36 | 132 |
MS.gene068822.t1 | MTR_1g009750 | 33.080 | 263 | 139 | 9 | 12 | 248 | 58 | 309 | 2.53e-36 | 131 |
MS.gene068822.t1 | MTR_2g008160 | 35.036 | 274 | 133 | 9 | 4 | 248 | 47 | 304 | 2.59e-36 | 131 |
MS.gene068822.t1 | MTR_5g033470 | 34.082 | 267 | 148 | 9 | 7 | 250 | 99 | 360 | 2.75e-36 | 132 |
MS.gene068822.t1 | MTR_6g043460 | 33.725 | 255 | 139 | 6 | 12 | 248 | 67 | 309 | 3.24e-36 | 132 |
MS.gene068822.t1 | MTR_0286s0010 | 34.351 | 262 | 144 | 7 | 6 | 246 | 59 | 313 | 3.97e-36 | 131 |
MS.gene068822.t1 | MTR_6g008075 | 34.351 | 262 | 144 | 7 | 6 | 246 | 59 | 313 | 3.97e-36 | 131 |
MS.gene068822.t1 | MTR_7g029030 | 34.510 | 255 | 136 | 8 | 14 | 248 | 58 | 301 | 4.52e-36 | 130 |
MS.gene068822.t1 | MTR_4g127670 | 31.783 | 258 | 147 | 8 | 12 | 248 | 55 | 304 | 1.78e-34 | 126 |
MS.gene068822.t1 | MTR_6g027440 | 31.641 | 256 | 142 | 7 | 12 | 247 | 52 | 294 | 1.06e-32 | 122 |
MS.gene068822.t1 | MTR_5g074700 | 38.605 | 215 | 86 | 10 | 54 | 247 | 5 | 194 | 2.63e-32 | 118 |
MS.gene068822.t1 | MTR_2g008730 | 34.764 | 233 | 124 | 7 | 36 | 246 | 54 | 280 | 2.70e-32 | 120 |
MS.gene068822.t1 | MTR_4g095450 | 30.469 | 256 | 147 | 6 | 14 | 248 | 60 | 305 | 6.25e-31 | 117 |
MS.gene068822.t1 | MTR_4g132110 | 29.730 | 259 | 148 | 6 | 12 | 248 | 63 | 309 | 7.33e-30 | 114 |
MS.gene068822.t1 | MTR_1g066380 | 29.084 | 251 | 150 | 5 | 12 | 243 | 58 | 299 | 3.27e-29 | 112 |
MS.gene068822.t1 | MTR_4g132110 | 29.167 | 264 | 148 | 6 | 12 | 248 | 63 | 314 | 4.10e-29 | 112 |
MS.gene068822.t1 | MTR_7g072490 | 31.092 | 238 | 82 | 4 | 27 | 247 | 2 | 174 | 1.20e-28 | 108 |
MS.gene068822.t1 | MTR_2g029880 | 37.356 | 174 | 93 | 6 | 76 | 247 | 9 | 168 | 2.58e-28 | 107 |
MS.gene068822.t1 | MTR_1g066710 | 27.888 | 251 | 153 | 5 | 12 | 243 | 58 | 299 | 4.02e-27 | 107 |
MS.gene068822.t1 | MTR_1g066640 | 27.888 | 251 | 153 | 5 | 12 | 243 | 58 | 299 | 4.41e-27 | 107 |
MS.gene068822.t1 | MTR_2g067450 | 35.556 | 180 | 89 | 6 | 20 | 179 | 49 | 221 | 5.75e-27 | 106 |
MS.gene068822.t1 | MTR_2g008160 | 30.769 | 273 | 111 | 8 | 4 | 248 | 47 | 269 | 2.05e-26 | 104 |
MS.gene068822.t1 | MTR_3g105790 | 30.502 | 259 | 153 | 6 | 7 | 246 | 51 | 301 | 6.77e-26 | 103 |
MS.gene068822.t1 | MTR_0147s0010 | 28.777 | 278 | 143 | 7 | 7 | 247 | 103 | 362 | 1.10e-25 | 104 |
MS.gene068822.t1 | MTR_2g008160 | 36.913 | 149 | 73 | 3 | 4 | 135 | 47 | 191 | 3.35e-25 | 99.4 |
MS.gene068822.t1 | MTR_1g066380 | 27.731 | 238 | 144 | 5 | 25 | 243 | 3 | 231 | 1.18e-24 | 99.4 |
MS.gene068822.t1 | MTR_1g066680 | 27.820 | 266 | 144 | 8 | 12 | 248 | 57 | 303 | 1.78e-23 | 97.4 |
MS.gene068822.t1 | MTR_3g072260 | 51.807 | 83 | 39 | 1 | 8 | 90 | 53 | 134 | 5.32e-22 | 89.4 |
MS.gene068822.t1 | MTR_2g078560 | 28.319 | 226 | 121 | 9 | 56 | 246 | 80 | 299 | 2.01e-19 | 86.3 |
MS.gene068822.t1 | MTR_3g105790 | 29.767 | 215 | 128 | 4 | 51 | 246 | 15 | 225 | 4.51e-17 | 78.6 |
MS.gene068822.t1 | MTR_4g031040 | 33.121 | 157 | 75 | 5 | 42 | 197 | 3 | 130 | 5.53e-17 | 75.9 |
MS.gene068822.t1 | MTR_5g074770 | 41.667 | 72 | 40 | 2 | 176 | 247 | 20 | 89 | 3.38e-11 | 59.3 |
MS.gene068822.t1 | MTR_2g029930 | 42.857 | 63 | 25 | 1 | 8 | 59 | 32 | 94 | 4.90e-11 | 58.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene068822.t1 | AT1G68850 | 66.415 | 265 | 71 | 2 | 1 | 247 | 50 | 314 | 5.45e-130 | 371 |
MS.gene068822.t1 | AT4G36430 | 44.444 | 261 | 125 | 3 | 4 | 247 | 53 | 310 | 4.98e-76 | 234 |
MS.gene068822.t1 | AT2G18150 | 44.061 | 261 | 126 | 3 | 4 | 247 | 59 | 316 | 1.33e-75 | 233 |
MS.gene068822.t1 | AT2G18140 | 45.349 | 258 | 121 | 3 | 8 | 248 | 62 | 316 | 1.64e-74 | 230 |
MS.gene068822.t1 | AT1G44970 | 44.318 | 264 | 128 | 3 | 1 | 247 | 65 | 326 | 3.74e-73 | 227 |
MS.gene068822.t1 | AT3G50990 | 44.015 | 259 | 125 | 3 | 6 | 247 | 66 | 321 | 4.93e-73 | 227 |
MS.gene068822.t1 | AT4G16270 | 46.212 | 264 | 122 | 3 | 1 | 247 | 70 | 330 | 1.45e-72 | 226 |
MS.gene068822.t1 | AT5G05340 | 41.887 | 265 | 126 | 5 | 1 | 247 | 50 | 304 | 9.13e-68 | 213 |
MS.gene068822.t1 | AT5G06720 | 40.769 | 260 | 133 | 5 | 7 | 248 | 58 | 314 | 1.41e-66 | 210 |
MS.gene068822.t1 | AT5G66390 | 40.078 | 257 | 134 | 3 | 8 | 247 | 60 | 313 | 1.60e-65 | 207 |
MS.gene068822.t1 | AT5G06730 | 39.231 | 260 | 137 | 5 | 7 | 248 | 59 | 315 | 4.91e-64 | 204 |
MS.gene068822.t1 | AT5G19890 | 42.586 | 263 | 120 | 8 | 7 | 247 | 56 | 309 | 1.43e-63 | 202 |
MS.gene068822.t1 | AT2G38380 | 40.755 | 265 | 135 | 6 | 7 | 252 | 57 | 318 | 3.11e-63 | 202 |
MS.gene068822.t1 | AT2G22420 | 40.000 | 270 | 140 | 3 | 1 | 253 | 43 | 307 | 1.39e-62 | 199 |
MS.gene068822.t1 | AT5G58400 | 43.511 | 262 | 119 | 6 | 5 | 247 | 54 | 305 | 1.43e-62 | 199 |
MS.gene068822.t1 | AT2G38390 | 40.385 | 260 | 133 | 6 | 7 | 247 | 57 | 313 | 1.73e-62 | 200 |
MS.gene068822.t1 | AT1G14540 | 39.394 | 264 | 134 | 3 | 1 | 247 | 41 | 295 | 2.25e-62 | 199 |
MS.gene068822.t1 | AT5G58390 | 42.085 | 259 | 121 | 6 | 8 | 247 | 48 | 296 | 2.69e-62 | 198 |
MS.gene068822.t1 | AT1G49570 | 40.769 | 260 | 130 | 4 | 8 | 247 | 75 | 330 | 4.34e-62 | 199 |
MS.gene068822.t1 | AT2G35380 | 40.000 | 270 | 135 | 3 | 1 | 247 | 50 | 315 | 4.50e-60 | 193 |
MS.gene068822.t1 | AT3G32980 | 40.000 | 260 | 135 | 5 | 7 | 247 | 57 | 314 | 1.73e-59 | 192 |
MS.gene068822.t1 | AT3G49120 | 39.615 | 260 | 136 | 5 | 7 | 247 | 58 | 315 | 1.89e-59 | 192 |
MS.gene068822.t1 | AT1G14550 | 40.076 | 262 | 130 | 6 | 4 | 247 | 49 | 301 | 2.50e-59 | 191 |
MS.gene068822.t1 | AT4G08770 | 38.931 | 262 | 139 | 5 | 4 | 246 | 47 | 306 | 3.19e-58 | 189 |
MS.gene068822.t1 | AT4G08780 | 38.168 | 262 | 141 | 5 | 4 | 246 | 47 | 306 | 5.94e-57 | 186 |
MS.gene068822.t1 | AT3G49110 | 38.462 | 260 | 139 | 5 | 7 | 247 | 59 | 316 | 4.58e-56 | 183 |
MS.gene068822.t1 | AT5G19880 | 39.695 | 262 | 134 | 6 | 10 | 250 | 54 | 312 | 4.16e-51 | 170 |
MS.gene068822.t1 | AT2G41480 | 38.783 | 263 | 128 | 8 | 7 | 246 | 55 | 307 | 2.02e-50 | 168 |
MS.gene068822.t1 | AT4G11290 | 36.538 | 260 | 140 | 7 | 9 | 248 | 53 | 307 | 4.11e-50 | 167 |
MS.gene068822.t1 | AT1G05260 | 35.227 | 264 | 148 | 6 | 5 | 250 | 50 | 308 | 9.69e-50 | 166 |
MS.gene068822.t1 | AT5G51890 | 37.500 | 264 | 141 | 6 | 4 | 249 | 49 | 306 | 1.29e-49 | 166 |
MS.gene068822.t1 | AT4G33420 | 38.314 | 261 | 127 | 8 | 4 | 246 | 60 | 304 | 6.02e-49 | 164 |
MS.gene068822.t1 | AT4G33420 | 38.314 | 261 | 127 | 8 | 4 | 246 | 107 | 351 | 2.00e-48 | 164 |
MS.gene068822.t1 | AT1G71695 | 35.659 | 258 | 133 | 7 | 12 | 248 | 75 | 320 | 1.81e-47 | 161 |
MS.gene068822.t1 | AT5G64120 | 37.209 | 258 | 133 | 8 | 7 | 246 | 61 | 307 | 9.16e-47 | 159 |
MS.gene068822.t1 | AT5G42180 | 36.653 | 251 | 136 | 5 | 13 | 246 | 55 | 299 | 1.51e-46 | 158 |
MS.gene068822.t1 | AT3G03670 | 36.782 | 261 | 135 | 7 | 8 | 247 | 50 | 301 | 1.27e-45 | 155 |
MS.gene068822.t1 | AT2G34060 | 34.432 | 273 | 148 | 6 | 9 | 257 | 70 | 335 | 1.75e-44 | 153 |
MS.gene068822.t1 | AT3G21770 | 34.363 | 259 | 145 | 7 | 9 | 248 | 57 | 309 | 2.82e-44 | 152 |
MS.gene068822.t1 | AT4G33870 | 32.203 | 295 | 141 | 8 | 9 | 250 | 96 | 384 | 3.84e-43 | 151 |
MS.gene068822.t1 | AT3G28200 | 35.361 | 263 | 141 | 5 | 6 | 249 | 46 | 298 | 1.08e-42 | 148 |
MS.gene068822.t1 | AT1G05240 | 34.363 | 259 | 137 | 8 | 12 | 247 | 57 | 305 | 3.93e-42 | 147 |
MS.gene068822.t1 | AT1G05250 | 34.363 | 259 | 137 | 8 | 12 | 247 | 57 | 305 | 3.93e-42 | 147 |
MS.gene068822.t1 | AT2G35380 | 37.281 | 228 | 116 | 3 | 43 | 247 | 4 | 227 | 4.16e-42 | 144 |
MS.gene068822.t1 | AT5G40150 | 34.962 | 266 | 133 | 8 | 6 | 246 | 57 | 307 | 5.49e-42 | 146 |
MS.gene068822.t1 | AT1G24110 | 34.657 | 277 | 146 | 7 | 6 | 254 | 47 | 316 | 9.72e-42 | 145 |
MS.gene068822.t1 | AT5G39580 | 36.680 | 259 | 134 | 9 | 7 | 246 | 51 | 298 | 1.00e-41 | 145 |
MS.gene068822.t1 | AT4G17690 | 33.585 | 265 | 138 | 6 | 8 | 248 | 53 | 303 | 1.64e-41 | 145 |
MS.gene068822.t1 | AT5G47000 | 35.115 | 262 | 141 | 7 | 6 | 247 | 58 | 310 | 2.55e-41 | 145 |
MS.gene068822.t1 | AT5G17820 | 35.019 | 257 | 134 | 9 | 9 | 247 | 52 | 293 | 3.39e-41 | 144 |
MS.gene068822.t1 | AT5G15180 | 35.271 | 258 | 136 | 9 | 12 | 248 | 63 | 310 | 3.76e-41 | 144 |
MS.gene068822.t1 | AT1G30870 | 36.905 | 252 | 127 | 8 | 14 | 246 | 84 | 322 | 3.37e-40 | 142 |
MS.gene068822.t1 | AT5G17820 | 35.019 | 257 | 134 | 9 | 9 | 247 | 105 | 346 | 4.32e-40 | 142 |
MS.gene068822.t1 | AT5G64110 | 33.829 | 269 | 146 | 8 | 1 | 248 | 54 | 311 | 2.04e-39 | 139 |
MS.gene068822.t1 | AT3G01190 | 34.866 | 261 | 137 | 10 | 9 | 248 | 54 | 302 | 1.45e-38 | 137 |
MS.gene068822.t1 | AT5G64100 | 34.457 | 267 | 141 | 9 | 1 | 246 | 57 | 310 | 9.94e-37 | 132 |
MS.gene068822.t1 | AT4G37520 | 31.518 | 257 | 145 | 5 | 14 | 248 | 60 | 307 | 1.24e-36 | 132 |
MS.gene068822.t1 | AT4G25980 | 32.714 | 269 | 147 | 9 | 4 | 248 | 49 | 307 | 3.41e-36 | 131 |
MS.gene068822.t1 | AT4G37520 | 30.769 | 260 | 146 | 5 | 14 | 248 | 60 | 310 | 3.87e-36 | 131 |
MS.gene068822.t1 | AT4G37530 | 31.538 | 260 | 144 | 5 | 14 | 248 | 60 | 310 | 7.92e-36 | 130 |
MS.gene068822.t1 | AT5G14130 | 30.620 | 258 | 149 | 8 | 12 | 248 | 63 | 311 | 3.87e-35 | 128 |
MS.gene068822.t1 | AT5G14130 | 30.620 | 258 | 149 | 8 | 12 | 248 | 104 | 352 | 7.51e-35 | 129 |
MS.gene068822.t1 | AT1G77100 | 32.584 | 267 | 143 | 11 | 4 | 247 | 47 | 299 | 1.12e-34 | 127 |
MS.gene068822.t1 | AT2G24800 | 32.700 | 263 | 143 | 6 | 7 | 246 | 57 | 308 | 1.80e-34 | 127 |
MS.gene068822.t1 | AT4G31760 | 32.432 | 259 | 148 | 6 | 7 | 246 | 55 | 305 | 3.21e-34 | 126 |
MS.gene068822.t1 | AT4G30170 | 30.830 | 253 | 155 | 4 | 12 | 248 | 58 | 306 | 1.91e-33 | 124 |
MS.gene068822.t1 | AT5G22410 | 32.576 | 264 | 146 | 9 | 12 | 254 | 59 | 311 | 2.79e-33 | 124 |
MS.gene068822.t1 | AT4G26010 | 30.980 | 255 | 137 | 8 | 13 | 247 | 54 | 289 | 4.82e-33 | 122 |
MS.gene068822.t1 | AT4G26010 | 30.980 | 255 | 137 | 8 | 13 | 247 | 82 | 317 | 6.76e-33 | 122 |
MS.gene068822.t1 | AT4G21960 | 30.315 | 254 | 143 | 6 | 12 | 243 | 62 | 303 | 1.20e-32 | 122 |
MS.gene068822.t1 | AT2G39040 | 30.980 | 255 | 152 | 3 | 12 | 246 | 77 | 327 | 1.21e-32 | 122 |
MS.gene068822.t1 | AT2G18980 | 31.599 | 269 | 132 | 9 | 12 | 248 | 56 | 304 | 2.39e-32 | 121 |
MS.gene068822.t1 | AT4G37530 | 32.301 | 226 | 122 | 4 | 14 | 214 | 60 | 279 | 2.68e-32 | 120 |
MS.gene068822.t1 | AT3G49960 | 30.859 | 256 | 151 | 6 | 14 | 248 | 60 | 310 | 6.72e-32 | 120 |
MS.gene068822.t1 | AT2G43480 | 31.579 | 266 | 148 | 9 | 12 | 254 | 68 | 322 | 1.86e-31 | 119 |
MS.gene068822.t1 | AT3G17070 | 28.788 | 264 | 159 | 6 | 8 | 249 | 65 | 321 | 3.33e-31 | 118 |
MS.gene068822.t1 | AT1G34510 | 31.373 | 255 | 138 | 8 | 13 | 248 | 54 | 290 | 5.38e-31 | 117 |
MS.gene068822.t1 | AT5G67400 | 29.297 | 256 | 155 | 7 | 14 | 248 | 60 | 310 | 1.63e-30 | 116 |
MS.gene068822.t1 | AT5G24070 | 30.502 | 259 | 146 | 9 | 12 | 247 | 68 | 315 | 5.30e-30 | 115 |
MS.gene068822.t1 | AT2G37130 | 28.916 | 249 | 148 | 6 | 12 | 240 | 30 | 269 | 1.42e-24 | 99.8 |
MS.gene068822.t1 | AT2G37130 | 28.916 | 249 | 148 | 6 | 12 | 240 | 61 | 300 | 1.81e-24 | 100 |
MS.gene068822.t1 | AT5G39580 | 39.860 | 143 | 64 | 4 | 7 | 132 | 51 | 188 | 4.78e-24 | 97.1 |
MS.gene068822.t1 | AT3G17070 | 27.309 | 249 | 151 | 7 | 23 | 249 | 18 | 258 | 1.19e-23 | 97.1 |
MS.gene068822.t1 | AT4G25980 | 34.483 | 145 | 74 | 3 | 4 | 131 | 94 | 234 | 1.28e-22 | 94.4 |
MS.gene068822.t1 | AT2G24800 | 35.461 | 141 | 70 | 2 | 7 | 130 | 57 | 193 | 1.09e-18 | 82.8 |
Find 60 sgRNAs with CRISPR-Local
Find 132 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTCTGATTCAATGGTCAAAA+TGG | 0.132257 | 5.2:+43186590 | MS.gene068822:CDS |
TAGGCCTTGATAAAGAAATT+TGG | 0.197512 | 5.2:-43185478 | None:intergenic |
GATGATACATACACACTTAA+AGG | 0.209734 | 5.2:+43185102 | MS.gene068822:CDS |
TTCTATCAGTTACTATTAAA+AGG | 0.244929 | 5.2:+43186456 | MS.gene068822:CDS |
CTTCCATGACTGCTTTATTC+AGG | 0.245006 | 5.2:+43184607 | MS.gene068822:CDS |
TTGGTGGACAAATAGATTTC+AGG | 0.248040 | 5.2:-43186368 | None:intergenic |
ACCAACATCCACTCTTTAAA+AGG | 0.265822 | 5.2:+43185141 | MS.gene068822:CDS |
GCTTCATCACTGGAGAAATT+AGG | 0.312437 | 5.2:+43186635 | MS.gene068822:CDS |
AAATCTATTTGTCCACCAAT+TGG | 0.335126 | 5.2:+43186372 | MS.gene068822:CDS |
TTCATCAGGTGTTGGAAGAT+TGG | 0.344913 | 5.2:-43185436 | None:intergenic |
CCATTGAATCAGAGAATTGC+TGG | 0.348685 | 5.2:-43186581 | None:intergenic |
AGGCCTTGATAAAGAAATTT+GGG | 0.352606 | 5.2:-43185477 | None:intergenic |
AATCTATTTGTCCACCAATT+GGG | 0.367894 | 5.2:+43186373 | MS.gene068822:CDS |
TGTAGGTTGGTGGACCATAT+TGG | 0.381231 | 5.2:+43185358 | MS.gene068822:intron |
TTGAACTGATTGTCTGAGAT+TGG | 0.384305 | 5.2:-43186342 | None:intergenic |
ATTCCCAAATTTCTTTATCA+AGG | 0.393262 | 5.2:+43185474 | MS.gene068822:CDS |
TCTGATTCAATGGTCAAAAT+GGG | 0.396498 | 5.2:+43186591 | MS.gene068822:CDS |
GTAGGTTGGTGGACCATATT+GGG | 0.400494 | 5.2:+43185359 | MS.gene068822:intron |
CCAGCAATTCTCTGATTCAA+TGG | 0.417000 | 5.2:+43186581 | MS.gene068822:CDS |
AGGCCTATCAGTCACGGATA+TGG | 0.421834 | 5.2:+43185494 | MS.gene068822:CDS |
CAACCATATCCGTGACTGAT+AGG | 0.423843 | 5.2:-43185497 | None:intergenic |
ACGGATATGGTTGCCCTTGT+CGG | 0.453404 | 5.2:+43185507 | MS.gene068822:CDS |
AAAGAATTGTCGAAGAGATT+AGG | 0.456399 | 5.2:-43186435 | None:intergenic |
GTAACGCAGCCTCGGTTGTT+CGG | 0.456843 | 5.2:+43184579 | MS.gene068822:CDS |
CCCACAGGAACATCCCAATA+TGG | 0.467663 | 5.2:-43185372 | None:intergenic |
ATCTATTTGTCCACCAATTG+GGG | 0.476877 | 5.2:+43186374 | MS.gene068822:CDS |
GAAATGTACTCGAGTGTGTT+CGG | 0.477719 | 5.2:+43186504 | MS.gene068822:CDS |
TAGGAAGCAAATGGAATGTT+CGG | 0.486422 | 5.2:+43184541 | None:intergenic |
ATAGAAACAAGGCTTTCATC+AGG | 0.515660 | 5.2:-43185450 | None:intergenic |
TGTTCAGGGTTGCGATGGAT+CGG | 0.520719 | 5.2:+43185071 | MS.gene068822:intron |
ACAAGGCTTTCATCAGGTGT+TGG | 0.523953 | 5.2:-43185444 | None:intergenic |
AATTCAGAAAGCTTCATCAC+TGG | 0.525241 | 5.2:+43186625 | MS.gene068822:CDS |
ATCAGGTGTTGGAAGATTGG+TGG | 0.526275 | 5.2:-43185433 | None:intergenic |
TGAACCTCGTAACGCAGCCT+CGG | 0.534467 | 5.2:+43184571 | MS.gene068822:CDS |
AGACCTGAATAAAGCAGTCA+TGG | 0.539942 | 5.2:-43184610 | None:intergenic |
CAGCACAAGAAAACAACTCC+AGG | 0.541678 | 5.2:-43185210 | None:intergenic |
TTTGTTGAATCAGAGTGCCC+TGG | 0.544131 | 5.2:+43185192 | MS.gene068822:CDS |
TTGACACCTTGCCATACCAA+TGG | 0.555332 | 5.2:-43186268 | None:intergenic |
CATGCAGGATCCCACACCAT+TGG | 0.575994 | 5.2:+43186252 | MS.gene068822:intron |
AGGATCCCACACCATTGGTA+TGG | 0.577138 | 5.2:+43186257 | MS.gene068822:intron |
ATTGGGATGTTCCTGTGGGA+AGG | 0.579787 | 5.2:+43185376 | MS.gene068822:CDS |
TATTGTGTTCAGGGTTGCGA+TGG | 0.580837 | 5.2:+43185066 | MS.gene068822:intron |
AGACAATAACATAACAGCAA+TGG | 0.581171 | 5.2:+43186401 | MS.gene068822:CDS |
ACCATATTGGGATGTTCCTG+TGG | 0.584136 | 5.2:+43185371 | MS.gene068822:CDS |
TTATCAAGGCCTATCAGTCA+CGG | 0.585184 | 5.2:+43185488 | MS.gene068822:CDS |
AATAAGAAACATACCGACAA+GGG | 0.588494 | 5.2:-43185520 | None:intergenic |
TCAGTTACTATTAAAAGGCG+AGG | 0.588718 | 5.2:+43186461 | MS.gene068822:CDS |
ACAGAATCTTTCCTTCCCAC+AGG | 0.589625 | 5.2:-43185387 | None:intergenic |
CCCACACCATTGGTATGGCA+AGG | 0.602364 | 5.2:+43186262 | MS.gene068822:CDS |
CCTTGCCATACCAATGGTGT+GGG | 0.603799 | 5.2:-43186262 | None:intergenic |
CAGTTACTATTAAAAGGCGA+GGG | 0.613439 | 5.2:+43186462 | MS.gene068822:CDS |
CTGATTCAATGGTCAAAATG+GGG | 0.625367 | 5.2:+43186592 | MS.gene068822:CDS |
ACCTTGCCATACCAATGGTG+TGG | 0.635221 | 5.2:-43186263 | None:intergenic |
AGCACAAGAAAACAACTCCA+GGG | 0.636706 | 5.2:-43185209 | None:intergenic |
ATTTGGGAATGATAGAAACA+AGG | 0.637153 | 5.2:-43185461 | None:intergenic |
ACAACCGAGGCTGCGTTACG+AGG | 0.637956 | 5.2:-43184575 | None:intergenic |
GAAGTGAAGCCGAACAACCG+AGG | 0.665422 | 5.2:-43184588 | None:intergenic |
TCTATTTGTCCACCAATTGG+GGG | 0.671500 | 5.2:+43186375 | MS.gene068822:CDS |
CCATATTGGGATGTTCCTGT+GGG | 0.672124 | 5.2:+43185372 | MS.gene068822:CDS |
TAATAAGAAACATACCGACA+AGG | 0.676698 | 5.2:-43185521 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TTATTATTAATTTACAACTT+AGG | + | chr5.2:43185538-43185557 | MS.gene068822:intron | 10.0% |
!!! | ATTAGTTTGAAAAAAAAAAA+TGG | + | chr5.2:43185727-43185746 | MS.gene068822:intron | 10.0% |
!! | AAAAATTTCAGAAGCTAATA+TGG | + | chr5.2:43184849-43184868 | MS.gene068822:intron | 20.0% |
!! | ATCATAGGAAAATTATATTG+TGG | + | chr5.2:43185574-43185593 | MS.gene068822:intron | 20.0% |
!! | ATTATTTATGCAATGCAATT+TGG | - | chr5.2:43186088-43186107 | None:intergenic | 20.0% |
!! | CAAATTTATCTCTCAATTAA+AGG | - | chr5.2:43184819-43184838 | None:intergenic | 20.0% |
!! | CTTTAATTGAGAGATAAATT+TGG | + | chr5.2:43184817-43184836 | MS.gene068822:intron | 20.0% |
!! | CTTTGTCTTATATAAGTTAT+TGG | + | chr5.2:43185304-43185323 | MS.gene068822:intron | 20.0% |
!! | TTCTATCAGTTACTATTAAA+AGG | + | chr5.2:43186456-43186475 | MS.gene068822:CDS | 20.0% |
!!! | AATATGTCTAACTTTGAAAT+AGG | - | chr5.2:43184704-43184723 | None:intergenic | 20.0% |
!!! | AATTTTCGATCAAGAATATA+TGG | + | chr5.2:43186291-43186310 | MS.gene068822:CDS | 20.0% |
!!! | TAATGTAGCTTTACTATATT+TGG | - | chr5.2:43184974-43184993 | None:intergenic | 20.0% |
! | AAACAGAAGCAATAATTACA+AGG | - | chr5.2:43184654-43184673 | None:intergenic | 25.0% |
! | AGAATGATCATAATCAAAGA+AGG | - | chr5.2:43185945-43185964 | None:intergenic | 25.0% |
! | ATCAAAATGTTGAATGAAAC+AGG | + | chr5.2:43184905-43184924 | MS.gene068822:intron | 25.0% |
! | ATTCCCAAATTTCTTTATCA+AGG | + | chr5.2:43185474-43185493 | MS.gene068822:CDS | 25.0% |
! | GCAATAATTACAAGGAAAAA+AGG | - | chr5.2:43184646-43184665 | None:intergenic | 25.0% |
! | TGTTTGTTCTACAAAAACAA+AGG | - | chr5.2:43185794-43185813 | None:intergenic | 25.0% |
!! | ATTTTCTTTATCTCCTCAAT+AGG | - | chr5.2:43185024-43185043 | None:intergenic | 25.0% |
!! | CTATATTTGGAGTAAAACTT+AGG | - | chr5.2:43184961-43184980 | None:intergenic | 25.0% |
!!! | AATTACTTTTACAACTACCT+AGG | - | chr5.2:43186186-43186205 | None:intergenic | 25.0% |
!!! | GGTTGTGATTTAATTTTTGA+AGG | + | chr5.2:43184870-43184889 | MS.gene068822:intron | 25.0% |
!!! | TTTGTCCTTTGATTTTTTGT+AGG | + | chr5.2:43185341-43185360 | MS.gene068822:intron | 25.0% |
AAAGAATTGTCGAAGAGATT+AGG | - | chr5.2:43186438-43186457 | None:intergenic | 30.0% | |
AAATCTATTTGTCCACCAAT+TGG | + | chr5.2:43186372-43186391 | MS.gene068822:CDS | 30.0% | |
AACTTGATGTTATTGTGTTC+AGG | + | chr5.2:43185056-43185075 | MS.gene068822:intron | 30.0% | |
AATAAGAAACATACCGACAA+GGG | - | chr5.2:43185523-43185542 | None:intergenic | 30.0% | |
AATCTATTTGTCCACCAATT+GGG | + | chr5.2:43186373-43186392 | MS.gene068822:CDS | 30.0% | |
AATTACACAAAACACACCAA+TGG | - | chr5.2:43185895-43185914 | None:intergenic | 30.0% | |
AATTTATATCGCACGCAATA+AGG | - | chr5.2:43186218-43186237 | None:intergenic | 30.0% | |
ACCAACCTACAAAAAATCAA+AGG | - | chr5.2:43185349-43185368 | None:intergenic | 30.0% | |
ACTTGATGTTATTGTGTTCA+GGG | + | chr5.2:43185057-43185076 | MS.gene068822:intron | 30.0% | |
AGACAATAACATAACAGCAA+TGG | + | chr5.2:43186401-43186420 | MS.gene068822:CDS | 30.0% | |
AGGCCTTGATAAAGAAATTT+GGG | - | chr5.2:43185480-43185499 | None:intergenic | 30.0% | |
AGTATTAGATGAACCTATTG+AGG | + | chr5.2:43185008-43185027 | MS.gene068822:intron | 30.0% | |
ATGATCATAATCAAAGAAGG+CGG | - | chr5.2:43185942-43185961 | None:intergenic | 30.0% | |
ATTTGGGAATGATAGAAACA+AGG | - | chr5.2:43185464-43185483 | None:intergenic | 30.0% | |
GATGATACATACACACTTAA+AGG | + | chr5.2:43185102-43185121 | MS.gene068822:CDS | 30.0% | |
GGTTCATCTAATACTTTGAA+TGG | - | chr5.2:43185003-43185022 | None:intergenic | 30.0% | |
TAATAAGAAACATACCGACA+AGG | - | chr5.2:43185524-43185543 | None:intergenic | 30.0% | |
TAGGCCTTGATAAAGAAATT+TGG | - | chr5.2:43185481-43185500 | None:intergenic | 30.0% | |
TCTGATTCAATGGTCAAAAT+GGG | + | chr5.2:43186591-43186610 | MS.gene068822:CDS | 30.0% | |
TGTACAAAACAATCTGTGTA+AGG | - | chr5.2:43185996-43186015 | None:intergenic | 30.0% | |
TGTATATCTAAGAACCAATG+TGG | + | chr5.2:43184782-43184801 | MS.gene068822:intron | 30.0% | |
TTGCAATGAAAGTCAATAAC+TGG | + | chr5.2:43186145-43186164 | MS.gene068822:intron | 30.0% | |
! | ATATTGTGGACTGTTTAGAT+AGG | + | chr5.2:43185588-43185607 | MS.gene068822:intron | 30.0% |
! | CACTGAGTTTCTATTTTCAA+GGG | + | chr5.2:43185856-43185875 | MS.gene068822:intron | 30.0% |
! | TCACTGAGTTTCTATTTTCA+AGG | + | chr5.2:43185855-43185874 | MS.gene068822:intron | 30.0% |
! | TTTCGTGTGATTTCAAGTAT+TGG | - | chr5.2:43185628-43185647 | None:intergenic | 30.0% |
! | TTTTCAAACTAATAGCGATC+AGG | - | chr5.2:43185720-43185739 | None:intergenic | 30.0% |
!! | ACATTTTAGTAGAATCGGTA+CGG | - | chr5.2:43184735-43184754 | None:intergenic | 30.0% |
!! | ACTGAGTTTCTATTTTCAAG+GGG | + | chr5.2:43185857-43185876 | MS.gene068822:intron | 30.0% |
!! | AGGTATTTTTATCACCACAT+TGG | - | chr5.2:43184799-43184818 | None:intergenic | 30.0% |
!! | AGTTATTGACTTTCATTGCA+AGG | - | chr5.2:43186146-43186165 | None:intergenic | 30.0% |
!! | TACCGATTCTACTAAAATGT+CGG | + | chr5.2:43184735-43184754 | MS.gene068822:intron | 30.0% |
!! | TTTCAAAGCCTTTTAAAGAG+TGG | - | chr5.2:43185152-43185171 | None:intergenic | 30.0% |
!!! | TCCTTTGATTTTTTGTAGGT+TGG | + | chr5.2:43185345-43185364 | MS.gene068822:intron | 30.0% |
!!! | TTTGATTTTTTGTAGGTTGG+TGG | + | chr5.2:43185348-43185367 | MS.gene068822:intron | 30.0% |
AAAATGTCGGTCATCATCTT+CGG | + | chr5.2:43184748-43184767 | MS.gene068822:intron | 35.0% | |
AACTACCTAGGAATCTTATG+AGG | - | chr5.2:43186174-43186193 | None:intergenic | 35.0% | |
AATCACACGAAACTACAACA+AGG | + | chr5.2:43185636-43185655 | MS.gene068822:intron | 35.0% | |
AATTCAGAAAGCTTCATCAC+TGG | + | chr5.2:43186625-43186644 | MS.gene068822:CDS | 35.0% | |
ACCAACATCCACTCTTTAAA+AGG | + | chr5.2:43185141-43185160 | MS.gene068822:CDS | 35.0% | |
ATAGAAACAAGGCTTTCATC+AGG | - | chr5.2:43185453-43185472 | None:intergenic | 35.0% | |
ATCTATTTGTCCACCAATTG+GGG | + | chr5.2:43186374-43186393 | MS.gene068822:CDS | 35.0% | |
CAGTTACTATTAAAAGGCGA+GGG | + | chr5.2:43186462-43186481 | MS.gene068822:CDS | 35.0% | |
CTCACATATGAATGAGAACA+AGG | + | chr5.2:43185831-43185850 | MS.gene068822:intron | 35.0% | |
CTCTGATTCAATGGTCAAAA+TGG | + | chr5.2:43186590-43186609 | MS.gene068822:CDS | 35.0% | |
CTGATTCAATGGTCAAAATG+GGG | + | chr5.2:43186592-43186611 | MS.gene068822:CDS | 35.0% | |
GTTCTCATTCATATGTGAGA+CGG | - | chr5.2:43185830-43185849 | None:intergenic | 35.0% | |
TCAGTTACTATTAAAAGGCG+AGG | + | chr5.2:43186461-43186480 | MS.gene068822:CDS | 35.0% | |
TGATCATAATCAAAGAAGGC+GGG | - | chr5.2:43185941-43185960 | None:intergenic | 35.0% | |
TGCTGATATTCTCACAATTG+CGG | + | chr5.2:43185228-43185247 | MS.gene068822:intron | 35.0% | |
TGTAGAACAAACATCCATCA+GGG | + | chr5.2:43185801-43185820 | MS.gene068822:intron | 35.0% | |
TTACCACAATATCCTCATCT+CGG | + | chr5.2:43186035-43186054 | MS.gene068822:intron | 35.0% | |
TTGTAGAACAAACATCCATC+AGG | + | chr5.2:43185800-43185819 | MS.gene068822:intron | 35.0% | |
! | GGAGAAGTGTATCTTATCAT+AGG | + | chr5.2:43185559-43185578 | MS.gene068822:intron | 35.0% |
! | TTGAACTGATTGTCTGAGAT+TGG | - | chr5.2:43186345-43186364 | None:intergenic | 35.0% |
! | TTGGTGGACAAATAGATTTC+AGG | - | chr5.2:43186371-43186390 | None:intergenic | 35.0% |
!! | GACCGACATTTTAGTAGAAT+CGG | - | chr5.2:43184740-43184759 | None:intergenic | 35.0% |
AGACCTGAATAAAGCAGTCA+TGG | - | chr5.2:43184613-43184632 | None:intergenic | 40.0% | |
AGCACAAGAAAACAACTCCA+GGG | - | chr5.2:43185212-43185231 | None:intergenic | 40.0% | |
AGTAGAATCGGTACGGTAAA+TGG | - | chr5.2:43184728-43184747 | None:intergenic | 40.0% | |
ATTTCATTTGAGCCGAGATG+AGG | - | chr5.2:43186050-43186069 | None:intergenic | 40.0% | |
CCAGCAATTCTCTGATTCAA+TGG | + | chr5.2:43186581-43186600 | MS.gene068822:CDS | 40.0% | |
CCATTGAATCAGAGAATTGC+TGG | - | chr5.2:43186584-43186603 | None:intergenic | 40.0% | |
GAAATGTACTCGAGTGTGTT+CGG | + | chr5.2:43186504-43186523 | MS.gene068822:CDS | 40.0% | |
GGTTTCCTCATAAGATTCCT+AGG | + | chr5.2:43186166-43186185 | MS.gene068822:intron | 40.0% | |
TCTATTTGTCCACCAATTGG+GGG | + | chr5.2:43186375-43186394 | MS.gene068822:CDS | 40.0% | |
TGCAAGGCAATGTGAAGAAA+TGG | - | chr5.2:43186130-43186149 | None:intergenic | 40.0% | |
TGTCTCACTCATTAAGACAG+AGG | - | chr5.2:43185693-43185712 | None:intergenic | 40.0% | |
TTATCAAGGCCTATCAGTCA+CGG | + | chr5.2:43185488-43185507 | MS.gene068822:CDS | 40.0% | |
TTTCTGATCACAACACATGC+AGG | + | chr5.2:43186237-43186256 | MS.gene068822:intron | 40.0% | |
! | CAGAGGACTATGAGCTTTTT+CGG | - | chr5.2:43185676-43185695 | None:intergenic | 40.0% |
! | CTTCCATGACTGCTTTATTC+AGG | + | chr5.2:43184607-43184626 | MS.gene068822:CDS | 40.0% |
! | TTGTGGACTGTTTAGATAGG+TGG | + | chr5.2:43185591-43185610 | MS.gene068822:intron | 40.0% |
!! | GAGTTTCTATTTTCAAGGGG+CGG | + | chr5.2:43185860-43185879 | MS.gene068822:intron | 40.0% |
!! | GCCTTTTAAAGAGTGGATGT+TGG | - | chr5.2:43185145-43185164 | None:intergenic | 40.0% |
!! | TTCATCAGGTGTTGGAAGAT+TGG | - | chr5.2:43185439-43185458 | None:intergenic | 40.0% |
ACAAGGCTTTCATCAGGTGT+TGG | - | chr5.2:43185447-43185466 | None:intergenic | 45.0% | |
ACAGAATCTTTCCTTCCCAC+AGG | - | chr5.2:43185390-43185409 | None:intergenic | 45.0% | |
ACCATATTGGGATGTTCCTG+TGG | + | chr5.2:43185371-43185390 | MS.gene068822:CDS | 45.0% | |
CAACCATATCCGTGACTGAT+AGG | - | chr5.2:43185500-43185519 | None:intergenic | 45.0% | |
CAGCACAAGAAAACAACTCC+AGG | - | chr5.2:43185213-43185232 | None:intergenic | 45.0% | |
CCATATTGGGATGTTCCTGT+GGG | + | chr5.2:43185372-43185391 | MS.gene068822:CDS | 45.0% | |
GGCTAGAGATGCTGTAATTC+TGG | + | chr5.2:43185249-43185268 | MS.gene068822:intron | 45.0% | |
TATTGTGTTCAGGGTTGCGA+TGG | + | chr5.2:43185066-43185085 | MS.gene068822:intron | 45.0% | |
TTATTGTCTCCTCCCCCAAT+TGG | - | chr5.2:43186390-43186409 | None:intergenic | 45.0% | |
TTGACACCTTGCCATACCAA+TGG | - | chr5.2:43186271-43186290 | None:intergenic | 45.0% | |
! | TTTGTTGAATCAGAGTGCCC+TGG | + | chr5.2:43185192-43185211 | MS.gene068822:CDS | 45.0% |
!! | ATCAGGTGTTGGAAGATTGG+TGG | - | chr5.2:43185436-43185455 | None:intergenic | 45.0% |
!! | GTAGGTTGGTGGACCATATT+GGG | + | chr5.2:43185359-43185378 | MS.gene068822:intron | 45.0% |
!! | TGTAGGTTGGTGGACCATAT+TGG | + | chr5.2:43185358-43185377 | MS.gene068822:intron | 45.0% |
ACCTTGCCATACCAATGGTG+TGG | - | chr5.2:43186266-43186285 | None:intergenic | 50.0% | |
ACGGATATGGTTGCCCTTGT+CGG | + | chr5.2:43185507-43185526 | MS.gene068822:CDS | 50.0% | |
AGGATCCCACACCATTGGTA+TGG | + | chr5.2:43186257-43186276 | MS.gene068822:intron | 50.0% | |
AGGCCTATCAGTCACGGATA+TGG | + | chr5.2:43185494-43185513 | MS.gene068822:CDS | 50.0% | |
ATTGGGATGTTCCTGTGGGA+AGG | + | chr5.2:43185376-43185395 | MS.gene068822:CDS | 50.0% | |
ATTTGTCCACCAATTGGGGG+AGG | + | chr5.2:43186378-43186397 | MS.gene068822:CDS | 50.0% | |
CCCACAGGAACATCCCAATA+TGG | - | chr5.2:43185375-43185394 | None:intergenic | 50.0% | |
CCTTGCCATACCAATGGTGT+GGG | - | chr5.2:43186265-43186284 | None:intergenic | 50.0% | |
GAGCCGAGATGAGGATATTG+TGG | - | chr5.2:43186041-43186060 | None:intergenic | 50.0% | |
TGTTCAGGGTTGCGATGGAT+CGG | + | chr5.2:43185071-43185090 | MS.gene068822:intron | 50.0% | |
ATGTGAGACGGTGACCCTGA+TGG | - | chr5.2:43185818-43185837 | None:intergenic | 55.0% | |
CATGCAGGATCCCACACCAT+TGG | + | chr5.2:43186252-43186271 | MS.gene068822:intron | 55.0% | |
CCCACACCATTGGTATGGCA+AGG | + | chr5.2:43186262-43186281 | MS.gene068822:CDS | 55.0% | |
GAAGTGAAGCCGAACAACCG+AGG | - | chr5.2:43184591-43184610 | None:intergenic | 55.0% | |
GGGGCGGCATTATTCACCAT+TGG | + | chr5.2:43185876-43185895 | MS.gene068822:intron | 55.0% | |
GTAACGCAGCCTCGGTTGTT+CGG | + | chr5.2:43184579-43184598 | MS.gene068822:CDS | 55.0% | |
TGAACCTCGTAACGCAGCCT+CGG | + | chr5.2:43184571-43184590 | MS.gene068822:CDS | 55.0% | |
TTGTCTCCTCCCCCAATTGG+TGG | - | chr5.2:43186387-43186406 | None:intergenic | 55.0% | |
ACAACCGAGGCTGCGTTACG+AGG | - | chr5.2:43184578-43184597 | None:intergenic | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5.2 | gene | 43184551 | 43186656 | 43184551 | ID=MS.gene068822 |
chr5.2 | mRNA | 43184551 | 43186656 | 43184551 | ID=MS.gene068822.t1;Parent=MS.gene068822 |
chr5.2 | exon | 43184551 | 43184628 | 43184551 | ID=MS.gene068822.t1.exon1;Parent=MS.gene068822.t1 |
chr5.2 | CDS | 43184551 | 43184628 | 43184551 | ID=cds.MS.gene068822.t1;Parent=MS.gene068822.t1 |
chr5.2 | exon | 43185078 | 43185218 | 43185078 | ID=MS.gene068822.t1.exon2;Parent=MS.gene068822.t1 |
chr5.2 | CDS | 43185078 | 43185218 | 43185078 | ID=cds.MS.gene068822.t1;Parent=MS.gene068822.t1 |
chr5.2 | exon | 43185363 | 43185528 | 43185363 | ID=MS.gene068822.t1.exon3;Parent=MS.gene068822.t1 |
chr5.2 | CDS | 43185363 | 43185528 | 43185363 | ID=cds.MS.gene068822.t1;Parent=MS.gene068822.t1 |
chr5.2 | exon | 43186259 | 43186656 | 43186259 | ID=MS.gene068822.t1.exon4;Parent=MS.gene068822.t1 |
chr5.2 | CDS | 43186259 | 43186656 | 43186259 | ID=cds.MS.gene068822.t1;Parent=MS.gene068822.t1 |
Gene Sequence |
Protein sequence |