AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene068824

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene068824.t1 MTR_5g049280 98.252 286 5 0 1 286 53 338 0.0 586
MS.gene068824.t1 MTR_5g021060 48.936 282 140 3 4 285 53 330 6.82e-94 280
MS.gene068824.t1 MTR_3g462850 92.199 141 11 0 146 286 10 150 1.91e-93 273
MS.gene068824.t1 MTR_7g072510 47.719 285 137 4 1 285 40 312 4.74e-91 273
MS.gene068824.t1 MTR_8g076820 47.719 285 141 5 4 286 53 331 1.19e-90 272
MS.gene068824.t1 MTR_5g074970 49.828 291 126 7 1 285 50 326 3.93e-89 268
MS.gene068824.t1 MTR_3g466200 48.276 290 131 6 1 285 45 320 6.81e-89 267
MS.gene068824.t1 MTR_5g014100 48.264 288 138 4 4 285 49 331 1.55e-88 267
MS.gene068824.t1 MTR_4g122640 48.789 289 134 7 1 285 58 336 3.76e-88 266
MS.gene068824.t1 MTR_2g029560 47.350 283 140 4 6 285 49 325 5.15e-88 266
MS.gene068824.t1 MTR_1g022970 46.667 285 149 3 1 285 66 347 3.50e-87 264
MS.gene068824.t1 MTR_7g026990 47.018 285 132 6 4 285 54 322 4.92e-87 263
MS.gene068824.t1 MTR_3g072190 47.518 282 136 4 4 285 49 318 6.94e-87 262
MS.gene068824.t1 MTR_2g084010 45.614 285 144 4 1 285 45 318 9.74e-86 259
MS.gene068824.t1 MTR_4g029170 49.310 290 127 8 1 285 47 321 2.31e-85 258
MS.gene068824.t1 MTR_7g072480 46.454 282 139 4 4 285 47 316 4.99e-85 257
MS.gene068824.t1 MTR_2g084080 44.561 285 146 4 1 285 45 317 6.97e-85 257
MS.gene068824.t1 MTR_5g083860 46.154 286 142 4 1 285 51 325 8.86e-85 257
MS.gene068824.t1 MTR_2g084110 44.561 285 146 4 1 285 45 317 2.07e-84 256
MS.gene068824.t1 MTR_4g029190 46.996 283 138 4 4 285 69 340 2.72e-84 256
MS.gene068824.t1 MTR_2g029830 45.907 281 147 5 7 286 54 330 4.13e-84 256
MS.gene068824.t1 MTR_2g084020 45.263 285 145 5 1 285 45 318 1.38e-83 254
MS.gene068824.t1 MTR_2g029800 46.975 281 144 5 7 286 55 331 2.71e-83 254
MS.gene068824.t1 MTR_3g094650 45.936 283 141 5 1 282 48 319 4.35e-83 253
MS.gene068824.t1 MTR_5g017850 46.643 283 144 5 4 285 50 326 3.05e-82 251
MS.gene068824.t1 MTR_5g017860 46.853 286 139 6 4 285 50 326 4.36e-82 250
MS.gene068824.t1 MTR_2g029740 46.429 280 145 5 7 285 55 330 5.56e-82 251
MS.gene068824.t1 MTR_2g084090 44.755 286 145 5 1 285 45 318 1.18e-81 249
MS.gene068824.t1 MTR_4g029180 47.387 287 137 6 1 285 47 321 1.44e-81 249
MS.gene068824.t1 MTR_5g074860 48.239 284 133 9 4 284 52 324 1.56e-81 249
MS.gene068824.t1 MTR_5g074740 49.123 285 131 8 4 285 48 321 4.29e-81 248
MS.gene068824.t1 MTR_4g029200 46.809 282 138 5 4 285 69 338 1.19e-80 247
MS.gene068824.t1 MTR_4g125940 46.043 278 145 4 10 286 2 275 1.32e-80 244
MS.gene068824.t1 MTR_5g074760 48.421 285 133 8 4 285 48 321 1.48e-80 246
MS.gene068824.t1 MTR_2g029750 46.786 280 144 5 7 285 55 330 2.29e-80 247
MS.gene068824.t1 MTR_5g074710 48.421 285 133 8 4 285 48 321 2.41e-80 246
MS.gene068824.t1 MTR_2g029815 45.775 284 143 6 7 286 55 331 3.26e-80 246
MS.gene068824.t1 MTR_4g125940 45.936 283 144 5 7 286 54 330 5.79e-80 245
MS.gene068824.t1 MTR_2g029820 45.714 280 147 5 8 286 56 331 1.54e-79 245
MS.gene068824.t1 MTR_4g083710 43.902 287 150 4 1 285 47 324 2.13e-79 243
MS.gene068824.t1 MTR_4g031140 44.406 286 149 5 1 285 48 324 3.18e-79 243
MS.gene068824.t1 MTR_2g029910 44.128 281 153 4 7 286 56 333 4.94e-79 243
MS.gene068824.t1 MTR_4g030890 45.455 286 146 5 1 285 120 396 5.39e-79 245
MS.gene068824.t1 MTR_2g040000 46.619 281 144 4 8 286 56 332 8.96e-79 242
MS.gene068824.t1 MTR_2g084000 43.416 281 148 3 5 285 50 319 9.52e-79 241
MS.gene068824.t1 MTR_2g029730 46.290 283 141 6 7 285 51 326 1.25e-78 242
MS.gene068824.t1 MTR_2g028980 44.803 279 149 5 8 285 56 330 1.58e-78 242
MS.gene068824.t1 MTR_3g466180 47.719 285 134 6 3 285 52 323 2.15e-78 241
MS.gene068824.t1 MTR_2g029860 43.972 282 149 4 7 285 55 330 2.35e-78 241
MS.gene068824.t1 MTR_3g094630 45.455 286 144 5 1 285 48 322 2.37e-77 238
MS.gene068824.t1 MTR_3g072190 47.126 261 126 4 25 285 3 251 2.61e-77 235
MS.gene068824.t1 MTR_3g094670 44.755 286 146 5 1 285 48 322 5.12e-77 237
MS.gene068824.t1 MTR_3g467600 47.872 282 132 8 8 285 54 324 5.68e-77 237
MS.gene068824.t1 MTR_2g029850 43.463 283 149 6 7 285 55 330 2.56e-76 236
MS.gene068824.t1 MTR_1g115900 43.662 284 146 7 4 285 50 321 3.46e-76 235
MS.gene068824.t1 MTR_7g093370 41.869 289 158 7 1 285 89 371 1.05e-74 233
MS.gene068824.t1 MTR_2g029830 44.656 262 140 5 26 286 5 262 3.45e-74 229
MS.gene068824.t1 MTR_1g054205 42.160 287 160 6 1 285 44 326 1.03e-73 229
MS.gene068824.t1 MTR_0155s0040 43.885 278 140 7 8 285 54 315 3.28e-73 227
MS.gene068824.t1 MTR_1g077000 44.086 279 140 7 7 285 65 327 4.54e-73 227
MS.gene068824.t1 MTR_5g022870 44.161 274 140 7 13 285 55 316 1.47e-72 226
MS.gene068824.t1 MTR_4g074995 42.160 287 142 5 1 285 44 308 2.40e-72 225
MS.gene068824.t1 MTR_4g074990 43.403 288 134 5 1 285 44 305 3.89e-72 224
MS.gene068824.t1 MTR_8g075100 42.857 287 149 8 1 285 46 319 1.05e-71 223
MS.gene068824.t1 MTR_1g101830 42.705 281 150 7 6 285 52 322 8.23e-71 221
MS.gene068824.t1 MTR_4g046713 41.577 279 154 7 9 285 55 326 2.23e-69 218
MS.gene068824.t1 MTR_4g074980 48.611 216 101 3 1 213 45 253 1.91e-67 210
MS.gene068824.t1 MTR_1g025980 42.647 272 146 5 13 284 56 317 3.16e-67 212
MS.gene068824.t1 MTR_2g088770 39.085 284 162 9 5 285 50 325 9.51e-65 206
MS.gene068824.t1 MTR_3g092990 40.860 279 159 4 9 286 54 327 2.15e-64 205
MS.gene068824.t1 MTR_2g008710 41.958 286 150 9 5 285 51 325 2.66e-64 205
MS.gene068824.t1 MTR_1g086320 42.254 284 149 7 9 285 58 333 8.08e-64 204
MS.gene068824.t1 MTR_4g074980 39.932 293 125 6 1 285 45 294 5.99e-63 200
MS.gene068824.t1 MTR_4g114210 41.197 284 150 9 8 285 48 320 9.24e-63 201
MS.gene068824.t1 MTR_4g133800 39.362 282 157 6 5 285 65 333 2.69e-62 200
MS.gene068824.t1 MTR_2g437770 41.818 275 145 7 12 285 81 341 9.72e-61 196
MS.gene068824.t1 MTR_1g038680 41.281 281 156 7 9 285 57 332 1.19e-60 196
MS.gene068824.t1 MTR_5g074860 40.141 284 117 7 4 284 52 285 1.45e-60 194
MS.gene068824.t1 MTR_4g087965 38.628 277 162 5 9 281 70 342 1.76e-59 193
MS.gene068824.t1 MTR_1g090760 38.129 278 164 6 7 281 54 326 2.15e-58 190
MS.gene068824.t1 MTR_1g086490 39.726 292 152 8 9 285 58 340 4.10e-58 189
MS.gene068824.t1 MTR_2g099175 38.298 282 151 10 13 285 68 335 6.42e-57 186
MS.gene068824.t1 MTR_7g086870 35.507 276 159 8 13 286 54 312 7.83e-56 182
MS.gene068824.t1 MTR_7g107520 38.462 286 157 10 5 285 49 320 2.15e-55 182
MS.gene068824.t1 MTR_4g132490 33.929 280 179 3 6 285 54 327 7.68e-55 181
MS.gene068824.t1 MTR_8g062780 37.143 280 167 7 9 285 51 324 2.72e-54 179
MS.gene068824.t1 MTR_2g077990 37.417 302 151 9 12 281 107 402 2.80e-54 181
MS.gene068824.t1 MTR_6g043280 38.214 280 150 9 12 286 72 333 4.42e-54 179
MS.gene068824.t1 MTR_2g067440 36.334 311 154 11 5 281 83 383 1.16e-53 179
MS.gene068824.t1 MTR_2g078280 37.631 287 142 8 12 266 107 388 1.62e-53 179
MS.gene068824.t1 MTR_3g092990 39.080 261 153 4 27 286 61 316 2.42e-53 176
MS.gene068824.t1 MTR_2g078610 37.086 302 152 9 12 281 107 402 4.59e-53 178
MS.gene068824.t1 MTR_7g086820 35.357 280 155 9 13 285 52 312 8.55e-53 175
MS.gene068824.t1 MTR_6g043240 38.434 281 154 8 7 285 68 331 3.47e-52 174
MS.gene068824.t1 MTR_0286s0010 37.324 284 166 7 6 285 59 334 1.22e-51 172
MS.gene068824.t1 MTR_6g008075 37.324 284 166 7 6 285 59 334 1.22e-51 172
MS.gene068824.t1 MTR_1g009750 37.234 282 158 9 12 285 58 328 2.01e-51 172
MS.gene068824.t1 MTR_7g029030 38.182 275 155 8 14 285 58 320 2.67e-51 171
MS.gene068824.t1 MTR_6g027440 37.184 277 157 7 12 285 52 314 4.04e-51 171
MS.gene068824.t1 MTR_2g008160 38.095 294 153 9 4 285 47 323 4.48e-51 171
MS.gene068824.t1 MTR_5g016010 36.101 277 163 9 14 284 60 328 9.27e-51 170
MS.gene068824.t1 MTR_2g008730 40.000 255 141 7 36 285 54 301 1.89e-50 168
MS.gene068824.t1 MTR_6g043460 38.376 271 153 6 12 281 67 324 2.55e-50 169
MS.gene068824.t1 MTR_5g074700 45.339 236 99 11 54 285 5 214 1.51e-49 163
MS.gene068824.t1 MTR_4g127670 36.131 274 162 8 12 281 55 319 1.35e-47 161
MS.gene068824.t1 MTR_5g033470 35.764 288 167 10 7 285 99 377 3.26e-46 159
MS.gene068824.t1 MTR_1g066380 33.213 277 173 5 12 286 58 324 1.32e-45 156
MS.gene068824.t1 MTR_1g066710 32.491 277 175 5 12 286 58 324 2.03e-44 153
MS.gene068824.t1 MTR_4g132110 32.975 279 169 6 12 285 63 328 2.52e-44 153
MS.gene068824.t1 MTR_1g066640 32.609 276 174 5 12 285 58 323 1.10e-43 151
MS.gene068824.t1 MTR_4g095450 34.191 272 164 7 14 281 60 320 1.13e-43 151
MS.gene068824.t1 MTR_3g072210 42.051 195 103 4 91 285 54 238 2.34e-43 148
MS.gene068824.t1 MTR_7g072490 36.402 239 87 3 27 265 2 175 6.70e-43 146
MS.gene068824.t1 MTR_4g132110 32.394 284 169 7 12 285 63 333 5.64e-42 147
MS.gene068824.t1 MTR_3g105790 34.859 284 168 7 7 285 51 322 1.94e-41 145
MS.gene068824.t1 MTR_1g066380 32.197 264 167 5 25 286 3 256 2.34e-41 143
MS.gene068824.t1 MTR_2g008160 34.130 293 131 8 4 285 47 288 4.44e-41 144
MS.gene068824.t1 MTR_1g009750 34.286 280 152 10 12 285 58 311 6.19e-41 144
MS.gene068824.t1 MTR_1g066680 32.979 282 165 8 12 285 57 322 4.26e-40 142
MS.gene068824.t1 MTR_2g067450 34.420 276 155 9 20 284 49 309 7.09e-40 141
MS.gene068824.t1 MTR_0147s0010 32.542 295 160 7 7 281 103 378 8.27e-40 142
MS.gene068824.t1 MTR_2g008160 43.624 149 80 2 4 152 47 191 2.84e-38 134
MS.gene068824.t1 MTR_2g029880 38.265 196 104 7 93 286 9 189 6.85e-34 123
MS.gene068824.t1 MTR_3g105790 35.000 240 143 5 51 285 15 246 3.07e-32 119
MS.gene068824.t1 MTR_3g072260 62.195 82 31 0 8 89 53 134 3.06e-30 111
MS.gene068824.t1 MTR_2g078560 28.261 230 123 8 86 281 95 316 1.25e-21 92.8
MS.gene068824.t1 MTR_7g086790 37.500 120 71 2 28 147 17 132 9.01e-21 87.8
MS.gene068824.t1 MTR_6g048160 56.944 72 27 2 20 91 22 89 2.49e-20 83.6
MS.gene068824.t1 MTR_4g114220 48.148 81 32 2 8 88 30 100 1.22e-18 80.9
MS.gene068824.t1 MTR_1g089005 44.211 95 46 2 5 93 39 132 5.91e-15 71.2
MS.gene068824.t1 MTR_4g031040 29.885 174 75 5 42 214 3 130 1.62e-14 69.3
MS.gene068824.t1 MTR_5g074770 41.304 92 51 3 193 284 20 108 3.42e-14 67.8
MS.gene068824.t1 MTR_7g086785 33.654 104 65 2 26 126 3 105 7.86e-13 64.7
MS.gene068824.t1 MTR_7g086810 34.483 87 31 1 13 99 38 98 6.02e-12 64.3
MS.gene068824.t1 MTR_5g058120 30.357 168 97 5 116 281 6 155 1.38e-11 63.5
MS.gene068824.t1 MTR_1g098320 37.805 82 47 2 204 285 47 124 4.89e-11 60.1
MS.gene068824.t1 MTR_2g029930 42.857 63 25 1 8 59 32 94 9.30e-11 58.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene068824.t1 AT1G68850 71.777 287 80 1 1 286 50 336 2.21e-158 444
MS.gene068824.t1 AT4G36430 48.763 283 141 3 4 286 53 331 9.97e-97 288
MS.gene068824.t1 AT2G18150 48.582 282 141 3 4 285 59 336 1.52e-95 285
MS.gene068824.t1 AT2G18140 48.921 278 138 3 8 285 62 335 4.59e-92 276
MS.gene068824.t1 AT1G44970 48.421 285 144 3 1 285 65 346 8.16e-92 276
MS.gene068824.t1 AT4G16270 49.825 285 137 3 1 285 70 348 1.20e-91 275
MS.gene068824.t1 AT3G50990 46.809 282 146 3 4 285 64 341 8.85e-91 273
MS.gene068824.t1 AT5G19890 47.887 284 131 8 7 285 56 327 1.46e-85 259
MS.gene068824.t1 AT5G05340 45.804 286 143 5 1 285 50 324 1.94e-84 256
MS.gene068824.t1 AT5G66390 44.245 278 151 3 8 285 60 333 2.53e-84 256
MS.gene068824.t1 AT2G35380 45.704 291 147 3 1 285 50 335 4.11e-82 251
MS.gene068824.t1 AT2G38380 45.907 281 146 6 7 285 57 333 2.44e-81 249
MS.gene068824.t1 AT2G22420 45.263 285 148 3 1 285 43 319 4.95e-81 248
MS.gene068824.t1 AT5G06720 42.657 286 159 5 1 285 52 333 1.51e-80 247
MS.gene068824.t1 AT2G38390 44.484 281 150 6 7 285 57 333 2.23e-80 247
MS.gene068824.t1 AT5G58390 46.071 280 138 6 8 285 48 316 2.91e-80 245
MS.gene068824.t1 AT5G06730 41.608 286 162 5 1 285 53 334 6.87e-80 246
MS.gene068824.t1 AT3G32980 45.390 282 149 5 7 286 57 335 1.43e-79 245
MS.gene068824.t1 AT5G58400 46.996 283 137 6 5 285 54 325 1.68e-79 244
MS.gene068824.t1 AT3G49120 44.326 282 152 5 7 286 58 336 8.99e-79 243
MS.gene068824.t1 AT1G49570 44.681 282 142 5 8 283 75 348 1.25e-77 240
MS.gene068824.t1 AT1G14540 43.056 288 148 4 1 285 41 315 2.19e-77 238
MS.gene068824.t1 AT1G14550 45.105 286 140 7 4 285 49 321 4.24e-77 238
MS.gene068824.t1 AT4G08770 42.456 285 159 5 4 286 47 328 5.83e-76 235
MS.gene068824.t1 AT3G49110 43.262 282 155 5 7 286 59 337 1.85e-75 234
MS.gene068824.t1 AT4G08780 41.404 285 162 5 4 286 47 328 2.03e-74 231
MS.gene068824.t1 AT5G51890 42.958 284 150 8 4 285 49 322 4.10e-68 214
MS.gene068824.t1 AT5G19880 44.523 283 143 7 10 285 54 329 8.44e-68 214
MS.gene068824.t1 AT4G11290 40.357 280 158 7 9 285 53 326 1.21e-67 213
MS.gene068824.t1 AT2G41480 42.807 285 146 8 7 285 55 328 1.50e-67 213
MS.gene068824.t1 AT4G33420 42.049 283 146 8 4 285 60 325 8.83e-67 211
MS.gene068824.t1 AT4G33420 42.049 283 146 8 4 285 107 372 3.25e-66 211
MS.gene068824.t1 AT1G05260 38.516 283 167 6 5 286 50 326 2.06e-65 207
MS.gene068824.t1 AT5G64120 42.143 280 149 8 7 285 61 328 1.46e-64 206
MS.gene068824.t1 AT2G35380 44.177 249 128 3 43 285 4 247 3.43e-64 202
MS.gene068824.t1 AT5G42180 41.176 272 150 5 13 284 55 316 3.57e-64 204
MS.gene068824.t1 AT1G71695 39.785 279 151 7 12 286 75 340 1.23e-63 204
MS.gene068824.t1 AT3G03670 40.780 282 153 7 8 285 50 321 8.24e-62 198
MS.gene068824.t1 AT2G34060 39.146 281 157 5 9 282 70 343 2.61e-61 197
MS.gene068824.t1 AT5G39580 41.281 281 151 9 7 285 51 319 2.11e-59 192
MS.gene068824.t1 AT5G17820 39.209 278 152 9 9 285 52 313 6.45e-58 188
MS.gene068824.t1 AT5G15180 38.849 278 155 9 12 285 63 329 7.64e-58 188
MS.gene068824.t1 AT1G05240 37.857 280 157 8 12 285 57 325 8.78e-58 188
MS.gene068824.t1 AT1G05250 37.857 280 157 8 12 285 57 325 8.78e-58 188
MS.gene068824.t1 AT3G21770 37.455 275 163 7 9 281 57 324 1.50e-57 187
MS.gene068824.t1 AT3G28200 38.298 282 161 5 6 285 46 316 3.03e-57 186
MS.gene068824.t1 AT5G17820 39.209 278 152 9 9 285 105 366 1.65e-56 186
MS.gene068824.t1 AT4G33870 34.951 309 158 8 9 281 96 397 4.15e-56 186
MS.gene068824.t1 AT5G40150 37.457 291 152 9 6 285 57 328 6.56e-56 183
MS.gene068824.t1 AT5G47000 38.163 283 162 7 6 285 58 330 1.94e-55 182
MS.gene068824.t1 AT4G17690 36.842 285 158 6 8 285 53 322 2.05e-55 182
MS.gene068824.t1 AT5G64110 38.408 289 162 8 1 285 54 330 2.40e-55 182
MS.gene068824.t1 AT5G64100 38.754 289 159 9 1 285 57 331 1.39e-54 180
MS.gene068824.t1 AT1G30870 40.433 277 147 9 14 286 84 346 2.19e-54 180
MS.gene068824.t1 AT3G01190 38.790 281 155 10 9 285 54 321 2.83e-54 179
MS.gene068824.t1 AT1G24110 37.500 280 163 6 6 281 47 318 2.20e-53 177
MS.gene068824.t1 AT4G25980 36.332 289 166 9 4 285 49 326 3.96e-51 171
MS.gene068824.t1 AT5G14130 35.740 277 166 8 12 285 63 330 4.30e-51 171
MS.gene068824.t1 AT4G26010 35.870 276 154 8 13 285 54 309 1.13e-50 169
MS.gene068824.t1 AT5G14130 35.252 278 166 8 12 285 104 371 1.40e-50 171
MS.gene068824.t1 AT4G26010 35.870 276 154 8 13 285 82 337 2.42e-50 169
MS.gene068824.t1 AT2G43480 37.500 280 157 9 12 285 68 335 3.72e-50 169
MS.gene068824.t1 AT4G37520 35.145 276 161 6 14 281 60 325 7.20e-50 167
MS.gene068824.t1 AT4G37530 36.232 276 158 6 14 281 60 325 1.06e-49 167
MS.gene068824.t1 AT2G24800 36.842 285 162 6 7 285 57 329 1.24e-49 167
MS.gene068824.t1 AT2G39040 37.456 283 159 7 12 285 77 350 6.38e-49 166
MS.gene068824.t1 AT4G31760 36.299 281 168 6 7 285 55 326 7.79e-49 165
MS.gene068824.t1 AT1G77100 35.739 291 166 11 1 285 44 319 1.44e-48 164
MS.gene068824.t1 AT2G18980 35.986 289 149 9 12 285 56 323 4.48e-48 163
MS.gene068824.t1 AT5G24070 35.357 280 163 9 12 285 68 335 7.74e-48 162
MS.gene068824.t1 AT4G30170 34.507 284 160 6 12 285 58 325 9.94e-48 162
MS.gene068824.t1 AT1G34510 36.364 275 154 8 13 285 54 309 1.78e-47 161
MS.gene068824.t1 AT5G22410 36.727 275 159 9 12 282 59 322 2.36e-47 161
MS.gene068824.t1 AT4G21960 33.333 279 168 6 12 285 62 327 2.40e-47 161
MS.gene068824.t1 AT4G37520 34.420 276 160 7 14 281 60 322 2.96e-47 161
MS.gene068824.t1 AT3G49960 35.294 272 166 6 14 281 60 325 5.84e-46 157
MS.gene068824.t1 AT4G37530 38.496 226 125 4 14 231 60 279 1.10e-44 153
MS.gene068824.t1 AT5G67400 33.088 272 172 7 14 281 60 325 7.60e-44 152
MS.gene068824.t1 AT2G37130 33.453 278 170 7 12 285 30 296 2.69e-43 150
MS.gene068824.t1 AT2G37130 33.213 277 172 6 12 285 61 327 7.25e-43 149
MS.gene068824.t1 AT3G17070 32.517 286 174 7 8 285 65 339 1.94e-42 149
MS.gene068824.t1 AT5G39580 48.252 143 69 3 7 149 51 188 6.71e-37 131
MS.gene068824.t1 AT3G17070 31.365 271 166 8 23 285 18 276 8.07e-35 127
MS.gene068824.t1 AT4G25980 41.379 145 81 2 4 148 94 234 2.38e-34 126
MS.gene068824.t1 AT2G24800 43.972 141 75 1 7 147 57 193 1.06e-30 115
MS.gene068824.t1 AT3G42570 36.842 95 59 1 53 146 53 147 1.82e-13 67.0

Find 0 sgRNAs with CRISPR-Local

Find 131 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTATTATTAATTTACAACTT+AGG - 37916:5401-5420 MS.gene068824:intron 10.0%
!!! TATTAGTTTGAAAAAAAAAA+TGG - 37916:5590-5609 MS.gene068824:CDS 10.0%
!! AAAAATTTCAGAAGCTAATA+TGG - 37916:4713-4732 MS.gene068824:CDS 20.0%
!! ATCATAGGAAAATTATATTG+TGG - 37916:5437-5456 MS.gene068824:intron 20.0%
!! ATTATTTATGCAATGCAATT+TGG + 37916:5952-5971 MS.gene068824:intergenic 20.0%
!! CAAATTTATCTCTCAATTAA+AGG + 37916:4683-4702 MS.gene068824:intergenic 20.0%
!! CTTTAATTGAGAGATAAATT+TGG - 37916:4681-4700 MS.gene068824:CDS 20.0%
!! CTTTGTCTTATATAAGTTAT+TGG - 37916:5167-5186 MS.gene068824:intron 20.0%
!! TTCTATCAGTTACTATTAAA+AGG - 37916:6320-6339 MS.gene068824:intron 20.0%
!!! AATATGTCTAACTTTGAAAT+AGG + 37916:4568-4587 MS.gene068824:intergenic 20.0%
!!! AATTTTCGATCAAGAATATA+TGG - 37916:6155-6174 MS.gene068824:intron 20.0%
!!! TAATGTAGCTTTACTATATT+TGG + 37916:4839-4858 MS.gene068824:intergenic 20.0%
! AAACAGAAGCAATAATTACA+AGG + 37916:4518-4537 MS.gene068824:intergenic 25.0%
! ATCAAAATGTTGAATGAAAC+AGG - 37916:4769-4788 MS.gene068824:CDS 25.0%
! ATTCCCAAATTTCTTTATCA+AGG - 37916:5337-5356 MS.gene068824:intron 25.0%
! GAATGATCATAAATCAAAGA+AGG + 37916:5807-5826 MS.gene068824:intergenic 25.0%
! GCAATAATTACAAGGAAAAA+AGG + 37916:4510-4529 MS.gene068824:intergenic 25.0%
! TGTTTGTTCTACAAAAACAA+AGG + 37916:5657-5676 MS.gene068824:intergenic 25.0%
!! ATTTTCTTTATCTCCTCAAT+AGG + 37916:4889-4908 MS.gene068824:intergenic 25.0%
!! CTATATTTGGAGTAAAACTT+AGG + 37916:4826-4845 MS.gene068824:intergenic 25.0%
!!! AATTACTTTTACAACTACCT+AGG + 37916:6050-6069 MS.gene068824:intergenic 25.0%
!!! GGTTGTGATTTAATTTTTGA+AGG - 37916:4734-4753 MS.gene068824:CDS 25.0%
!!! TTTGTCCTTTGATTTTTTGT+AGG - 37916:5204-5223 MS.gene068824:intron 25.0%
AAACTTGATGTTATGTGTTC+AGG - 37916:4920-4939 MS.gene068824:intron 30.0%
AAAGAATTGTCGAAGAGATT+AGG + 37916:6302-6321 MS.gene068824:intergenic 30.0%
AAATCTATTTGTCCACCAAT+TGG - 37916:6236-6255 MS.gene068824:intron 30.0%
AACTTGATGTTATGTGTTCA+GGG - 37916:4921-4940 MS.gene068824:intron 30.0%
AATAAGAAACATACCGACAA+GGG + 37916:5386-5405 MS.gene068824:intergenic 30.0%
AATCTATTTGTCCACCAATT+GGG - 37916:6237-6256 MS.gene068824:intron 30.0%
AATTACACAAAACACACCAA+TGG + 37916:5757-5776 MS.gene068824:intergenic 30.0%
AATTTATATCGCACGCAATA+AGG + 37916:6082-6101 MS.gene068824:intergenic 30.0%
ACCAACCTACAAAAAATCAA+AGG + 37916:5212-5231 MS.gene068824:intergenic 30.0%
AGACAATAACATAACAGCAA+TGG - 37916:6265-6284 MS.gene068824:intron 30.0%
AGGCCTTGATAAAGAAATTT+GGG + 37916:5343-5362 MS.gene068824:intergenic 30.0%
AGTATTAGATGAACCTATTG+AGG - 37916:4873-4892 MS.gene068824:intron 30.0%
ATTTGGGAATGATAGAAACA+AGG + 37916:5327-5346 MS.gene068824:intergenic 30.0%
GATGATACATACACACTTAA+AGG - 37916:4966-4985 MS.gene068824:intron 30.0%
GGTTCATCTAATACTTTGAA+TGG + 37916:4868-4887 MS.gene068824:intergenic 30.0%
TAATAAGAAACATACCGACA+AGG + 37916:5387-5406 MS.gene068824:intergenic 30.0%
TAGGCCTTGATAAAGAAATT+TGG + 37916:5344-5363 MS.gene068824:intergenic 30.0%
TCTGATTCAATGGTCAAAAT+GGG - 37916:6455-6474 MS.gene068824:intron 30.0%
TGATCATAAATCAAAGAAGG+CGG + 37916:5804-5823 MS.gene068824:intergenic 30.0%
TGTACAAAACAATCTGTGTA+AGG + 37916:5859-5878 MS.gene068824:intergenic 30.0%
TGTATATCTAAGAACCAATG+TGG - 37916:4646-4665 MS.gene068824:CDS 30.0%
TTGCAATGAAAGTCAATAAC+TGG - 37916:6009-6028 MS.gene068824:intron 30.0%
! ATATTGTGGACTGTTTAGAT+AGG - 37916:5451-5470 MS.gene068824:intron 30.0%
! CACTGAGTTTCTATTTTCAA+GGG - 37916:5718-5737 MS.gene068824:intron 30.0%
! TCACTGAGTTTCTATTTTCA+AGG - 37916:5717-5736 MS.gene068824:CDS 30.0%
! TTTTCAAACTAATAGCGATC+AGG + 37916:5584-5603 MS.gene068824:intergenic 30.0%
!! ACATTTTAGTAGAATCGGTA+CGG + 37916:4599-4618 MS.gene068824:intergenic 30.0%
!! ACTGAGTTTCTATTTTCAAG+GGG - 37916:5719-5738 MS.gene068824:intron 30.0%
!! AGGTATTTTTATCACCACAT+TGG + 37916:4663-4682 MS.gene068824:intergenic 30.0%
!! AGTTATTGACTTTCATTGCA+AGG + 37916:6010-6029 MS.gene068824:intergenic 30.0%
!! TACCGATTCTACTAAAATGT+CGG - 37916:4599-4618 MS.gene068824:CDS 30.0%
!! TTTCAAAGCCTTTTAAAGAG+TGG + 37916:5016-5035 MS.gene068824:intergenic 30.0%
!!! TCCTTTGATTTTTTGTAGGT+TGG - 37916:5208-5227 MS.gene068824:intron 30.0%
!!! TTCGTGTGATTTTCAAGTAT+TGG + 37916:5491-5510 MS.gene068824:intergenic 30.0%
!!! TTTGATTTTTTGTAGGTTGG+TGG - 37916:5211-5230 MS.gene068824:intron 30.0%
AAAATGTCGGTCATCATCTT+CGG - 37916:4612-4631 MS.gene068824:CDS 35.0%
AACTACCTAGGAATCTTATG+AGG + 37916:6038-6057 MS.gene068824:intergenic 35.0%
AATCACACGAAACTACAACA+AGG - 37916:5500-5519 MS.gene068824:intron 35.0%
AATTCAGAAAGCTTCATCAC+TGG - 37916:6488-6507 MS.gene068824:CDS 35.0%
ACCAACATCCACTCTTTAAA+AGG - 37916:5005-5024 MS.gene068824:intron 35.0%
ATAGAAACAAGGCTTTCATC+AGG + 37916:5316-5335 MS.gene068824:intergenic 35.0%
ATCTATTTGTCCACCAATTG+GGG - 37916:6238-6257 MS.gene068824:intron 35.0%
CAGTTACTATTAAAAGGCGA+GGG - 37916:6326-6345 MS.gene068824:intron 35.0%
CTCACATATGAATGAGAACA+AGG - 37916:5693-5712 MS.gene068824:CDS 35.0%
CTCTGATTCAATGGTCAAAA+TGG - 37916:6454-6473 MS.gene068824:intron 35.0%
GATCATAAATCAAAGAAGGC+GGG + 37916:5803-5822 MS.gene068824:intergenic 35.0%
GTTCTCATTCATATGTGAGA+CGG + 37916:5692-5711 MS.gene068824:intergenic 35.0%
TACCACAATAATCCTCATCT+CGG - 37916:5899-5918 MS.gene068824:CDS 35.0%
TCAGTTACTATTAAAAGGCG+AGG - 37916:6325-6344 MS.gene068824:intron 35.0%
TGCTGATATTCTCACAATTG+CGG - 37916:5091-5110 MS.gene068824:intron 35.0%
TTGTAGAACAAACATCCATC+AGG - 37916:5663-5682 MS.gene068824:CDS 35.0%
! GGAGAAGTGTATCTTATCAT+AGG - 37916:5422-5441 MS.gene068824:intron 35.0%
! TTGAACTGATTGTCTGAGAT+TGG + 37916:6209-6228 MS.gene068824:intergenic 35.0%
! TTGGTGGACAAATAGATTTC+AGG + 37916:6235-6254 MS.gene068824:intergenic 35.0%
!! GACCGACATTTTAGTAGAAT+CGG + 37916:4604-4623 MS.gene068824:intergenic 35.0%
AGACCTGAATAAAGCAGTCA+TGG + 37916:4477-4496 MS.gene068824:intergenic 40.0%
AGTAGAATCGGTACGGTAAA+TGG + 37916:4592-4611 MS.gene068824:intergenic 40.0%
ATTTCATTTGAGCCGAGATG+AGG + 37916:5914-5933 MS.gene068824:intergenic 40.0%
CCAGCAATTCTCTGATTCAA+TGG - 37916:6445-6464 MS.gene068824:intron 40.0%
CCATTGAATCAGAGAATTGC+TGG + 37916:6448-6467 MS.gene068824:intergenic 40.0%
GAAATGTACTCGAGTGTGTT+CGG - 37916:6368-6387 MS.gene068824:intron 40.0%
GCTTCATCACTGGAGAAATT+AGG - 37916:6498-6517 MS.gene068824:CDS 40.0%
GGTTTCCTCATAAGATTCCT+AGG - 37916:6030-6049 MS.gene068824:intron 40.0%
TCTATTTGTCCACCAATTGG+GGG - 37916:6239-6258 MS.gene068824:intron 40.0%
TGCAAGGCAATGTGAAGAAA+TGG + 37916:5994-6013 MS.gene068824:intergenic 40.0%
TGTCTCACTCATTAAGACAG+AGG + 37916:5557-5576 MS.gene068824:intergenic 40.0%
TTATCAAGGCCTATCAGTCA+CGG - 37916:5351-5370 MS.gene068824:intron 40.0%
TTTCTGATCACAACACATGC+AGG - 37916:6101-6120 MS.gene068824:intron 40.0%
! CAGAGGACTATGAGCTTTTT+CGG + 37916:5540-5559 MS.gene068824:intergenic 40.0%
! CTTCCATGACTGCTTTATTC+AGG - 37916:4471-4490 MS.gene068824:CDS 40.0%
! TTGTGGACTGTTTAGATAGG+TGG - 37916:5454-5473 MS.gene068824:intron 40.0%
!! GAGTTTCTATTTTCAAGGGG+CGG - 37916:5722-5741 MS.gene068824:intron 40.0%
!! GCCTTTTAAAGAGTGGATGT+TGG + 37916:5009-5028 MS.gene068824:intergenic 40.0%
!! TTCATCAGGTGTTGGAAGAT+TGG + 37916:5302-5321 MS.gene068824:intergenic 40.0%
ACAAGGCTTTCATCAGGTGT+TGG + 37916:5310-5329 MS.gene068824:intergenic 45.0%
ACAGAATCTTTCCTTCCCAC+AGG + 37916:5253-5272 MS.gene068824:intergenic 45.0%
ACCATATTGGGATGTTCCTG+TGG - 37916:5234-5253 MS.gene068824:intron 45.0%
AGCCGAGATGAGGATTATTG+TGG + 37916:5904-5923 MS.gene068824:intergenic 45.0%
CAACCATATCCGTGACTGAT+AGG + 37916:5363-5382 MS.gene068824:intergenic 45.0%
CAGCACAAGAAACAACTCCA+GGG + 37916:5076-5095 MS.gene068824:intergenic 45.0%
CCATATTGGGATGTTCCTGT+GGG - 37916:5235-5254 MS.gene068824:intron 45.0%
GGCTAGAGATGCTGTAATTC+TGG - 37916:5112-5131 MS.gene068824:intron 45.0%
TCAGCACAAGAAACAACTCC+AGG + 37916:5077-5096 MS.gene068824:intergenic 45.0%
TTATGTGTTCAGGGTTGCGA+TGG - 37916:4930-4949 MS.gene068824:intron 45.0%
TTATTGTCTCCTCCCCCAAT+TGG + 37916:6254-6273 MS.gene068824:intergenic 45.0%
TTGACACCTTGCCATACCAA+TGG + 37916:6135-6154 MS.gene068824:intergenic 45.0%
! TTTGTTGAATCAGAGTGCCC+TGG - 37916:5056-5075 MS.gene068824:intron 45.0%
!! ATCAGGTGTTGGAAGATTGG+TGG + 37916:5299-5318 MS.gene068824:intergenic 45.0%
!! GTAGGTTGGTGGACCATATT+GGG - 37916:5222-5241 MS.gene068824:intron 45.0%
!! TGTAGGTTGGTGGACCATAT+TGG - 37916:5221-5240 MS.gene068824:intron 45.0%
ACCTTGCCATACCAATGGTG+TGG + 37916:6130-6149 MS.gene068824:intergenic 50.0%
ACGGATATGGTTGCCCTTGT+CGG - 37916:5370-5389 MS.gene068824:intron 50.0%
AGGATCCCACACCATTGGTA+TGG - 37916:6121-6140 MS.gene068824:intron 50.0%
AGGCCTATCAGTCACGGATA+TGG - 37916:5357-5376 MS.gene068824:intron 50.0%
ATTGGGATGTTCCTGTGGGA+AGG - 37916:5239-5258 MS.gene068824:intron 50.0%
ATTTGTCCACCAATTGGGGG+AGG - 37916:6242-6261 MS.gene068824:intron 50.0%
CCCACAGGAACATCCCAATA+TGG + 37916:5238-5257 MS.gene068824:intergenic 50.0%
CCTTGCCATACCAATGGTGT+GGG + 37916:6129-6148 MS.gene068824:intergenic 50.0%
TATGTGAGACGGTGACCTGA+TGG + 37916:5681-5700 MS.gene068824:intergenic 50.0%
TGTTCAGGGTTGCGATGGAT+CGG - 37916:4935-4954 MS.gene068824:intron 50.0%
CATGCAGGATCCCACACCAT+TGG - 37916:6116-6135 MS.gene068824:intron 55.0%
CCCACACCATTGGTATGGCA+AGG - 37916:6126-6145 MS.gene068824:intron 55.0%
GAAGTGAAGCCGAACAACCG+AGG + 37916:4455-4474 MS.gene068824:intergenic 55.0%
GGGGCGGCATTATTCACCAT+TGG - 37916:5738-5757 MS.gene068824:intron 55.0%
GTAACGCAGCCTCGGTTGTT+CGG - 37916:4443-4462 MS.gene068824:CDS 55.0%
TGAACCTCGTAACGCAGCCT+CGG - 37916:4435-4454 MS.gene068824:CDS 55.0%
TTGTCTCCTCCCCCAATTGG+TGG + 37916:6251-6270 MS.gene068824:intergenic 55.0%
ACAACCGAGGCTGCGTTACG+AGG + 37916:4442-4461 MS.gene068824:intergenic 60.0%


Chromosome Type Strat End Strand Name
37916 gene 4415 6547 4415 ID=MS.gene068824
37916 mRNA 4415 6547 4415 ID=MS.gene068824.t1;Parent=MS.gene068824
37916 exon 6470 6547 6470 ID=MS.gene068824.t1.exon1;Parent=MS.gene068824.t1
37916 CDS 6470 6547 6470 ID=cds.MS.gene068824.t1;Parent=MS.gene068824.t1
37916 exon 5829 6020 5829 ID=MS.gene068824.t1.exon2;Parent=MS.gene068824.t1
37916 CDS 5829 6020 5829 ID=cds.MS.gene068824.t1;Parent=MS.gene068824.t1
37916 exon 5571 5736 5571 ID=MS.gene068824.t1.exon3;Parent=MS.gene068824.t1
37916 CDS 5571 5736 5571 ID=cds.MS.gene068824.t1;Parent=MS.gene068824.t1
37916 exon 4415 4839 4415 ID=MS.gene068824.t1.exon4;Parent=MS.gene068824.t1
37916 CDS 4415 4839 4415 ID=cds.MS.gene068824.t1;Parent=MS.gene068824.t1
Gene Sequence

>MS.gene068824

ATGGAATGTTCGGTGCTTTCTGAACCTCGTAACGCAGCCTCGGTTGTTCGGCTTCACTTCCATGACTGCTTTATTCAGGTCTCAAAAACTTGCCTTTTTTCCTTGTAATTATTGCTTCTGTTTTCATGTTAGAAAGAAAAAAGAGTAAATCCTATTTCAAAGTTAGACATATTTCCATTTACCGTACCGATTCTACTAAAATGTCGGTCATCATCTTCGGTTTTTACAAAATGTATATCTAAGAACCAATGTGGTGATAAAAATACCTTTAATTGAGAGATAAATTTGGAGATAAAATAAAAATTTCAGAAGCTAATATGGTTGTGATTTAATTTTTGAAGGACTAATTTAGTAATCAAAATGTTGAATGAAACAGGTTATGTCTGTGTATATACTTTGCAATATCAACCTAAGTTTTACTCCAAATATAGTAAAGCTACATTACATGTTCCATTCAAAGTATTAGATGAACCTATTGAGGAGATAAAGAAAATTCGTACTAAAGAAACTTGATGTTATGTGTTCAGGGTTGCGATGGATCGGTCTTGCTCGATGATACATACACACTTAAAGGTGAAAAGAAAGCAGCTACCAACATCCACTCTTTAAAAGGCTTTGAAATTATCGATCAAATCAAGAACTTTGTTGAATCAGAGTGCCCTGGAGTTGTTTCTTGTGCTGATATTCTCACAATTGCGGCTAGAGATGCTGTAATTCTGGTAAAACAAACAATATGTACAACAAAATTCAATCTTTGTCTTATATAAGTTATTGGATTTATTATATCTCTTTGTCCTTTGATTTTTTGTAGGTTGGTGGACCATATTGGGATGTTCCTGTGGGAAGGAAAGATTCTGTGACTGCAAGTTTTGAACTTGCTACCACCAATCTTCCAACACCTGATGAAAGCCTTGTTTCTATCATTCCCAAATTTCTTTATCAAGGCCTATCAGTCACGGATATGGTTGCCCTTGTCGGTATGTTTCTTATTATTAATTTACAACTTAGGAGAAGTGTATCTTATCATAGGAAAATTATATTGTGGACTGTTTAGATAGGTGGTTTACAGCAGACCAATACTTGAAAATCACACGAAACTACAACAAGGACTCACAGTACTTGCCGAAAAAGCTCATAGTCCTCTGTCTTAATGAGTGAGACAGTAACCTGATCGCTATTAGTTTGAAAAAAAAAATGGAAAAATGAATGAGTCGTCAAATCTCAACTCATATTCATTTTCCTTTGTTTTTGTAGAACAAACATCCATCAGGTCACCGTCTCACATATGAATGAGAACAAGGATCACTGAGTTTCTATTTTCAAGGGGCGGCATTATTCACCATTGGTGTGTTTTGTGTAATTTTAAAGTGTGATTCATCGTAAAACCCGCCTTCTTTGATTTATGATCATTCTAGCTAGCATATTAACTAGAGTGAGTAGACCTTACACAGATTGTTTTGTACAATTAGTACAACTCTCAGTTTTACCACAATAATCCTCATCTCGGCTCAAATGAAATGTACAAAATAACAAACCAAATTGCATTGCATAAATAATCAAAATATGAATATTTTGACCATTTCTTCACATTGCCTTGCAATGAAAGTCAATAACTGGTTTCCTCATAAGATTCCTAGGTAGTTGTAAAAGTAATTTGTAATAAACCTTATTGCGTGCGATATAAATTTTCTGATCACAACACATGCAGGATCCCACACCATTGGTATGGCAAGGTGTCAAAATTTTCGATCAAGAATATATGGAGACTATGAATCAACTTCAGTGAAAAATCCAATCTCAGACAATCAGTTCAACAACCTGAAATCTATTTGTCCACCAATTGGGGGAGGAGACAATAACATAACAGCAATGGACTATGTGACGCCTAATCTCTTCGACAATTCTTTCTATCAGTTACTATTAAAAGGCGAGGGTGTTCTTAACTCAGATCAAGAAATGTACTCGAGTGTGTTCGGAATCGAAACAAGAGAGCTTGTCAAGAAGTATGCAGTAGACTCTCTTGCTTTCTTCCAGCAATTCTCTGATTCAATGGTCAAAATGGGAAATATCACAAATTCAGAAAGCTTCATCACTGGAGAAATTAGGAAGAACTGCAGATTTGTTAACACGTAA
Protein sequence

>MS.gene068824.t1

MECSVLSEPRNAASVVRLHFHDCFIQGCDGSVLLDDTYTLKGEKKAATNIHSLKGFEIIDQIKNFVESECPGVVSCADILTIAARDAVILVGGPYWDVPVGRKDSVTASFELATTNLPTPDESLVSIIPKFLYQGLSVTDMVALVGSHTIGMARCQNFRSRIYGDYESTSVKNPISDNQFNNLKSICPPIGGGDNNITAMDYVTPNLFDNSFYQLLLKGEGVLNSDQEMYSSVFGIETRELVKKYAVDSLAFFQQFSDSMVKMGNITNSESFITGEIRKNCRFVNT