Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene024390.t1 | XP_004494871.1 | 67.4 | 276 | 55 | 8 | 1 | 253 | 1 | 264 | 2.90E-85 | 325.1 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene024390.t1 | P19684 | 34.3 | 175 | 111 | 4 | 71 | 242 | 115 | 288 | 4.0e-19 | 96.7 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene024390.t1 | A0A1S2XWT8 | 67.4 | 276 | 55 | 8 | 1 | 253 | 1 | 264 | 2.1e-85 | 325.1 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene019556 | MS.gene024390 | PPI |
MS.gene94561 | MS.gene024390 | PPI |
MS.gene024390 | MS.gene040115 | PPI |
MS.gene056722 | MS.gene024390 | PPI |
MS.gene047001 | MS.gene024390 | PPI |
MS.gene93753 | MS.gene024390 | PPI |
MS.gene001756 | MS.gene024390 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene024390.t1 | MTR_7g118230 | 76.842 | 190 | 10 | 2 | 60 | 249 | 33 | 188 | 1.01e-88 | 266 |
MS.gene024390.t1 | MTR_1g045510 | 36.364 | 176 | 100 | 3 | 70 | 244 | 113 | 277 | 2.01e-25 | 101 |
MS.gene024390.t1 | MTR_1g056520 | 33.498 | 203 | 109 | 5 | 55 | 249 | 101 | 285 | 1.48e-24 | 99.8 |
MS.gene024390.t1 | MTR_7g106440 | 30.688 | 189 | 127 | 3 | 57 | 242 | 96 | 283 | 1.25e-21 | 92.0 |
MS.gene024390.t1 | MTR_3g027140 | 31.677 | 161 | 107 | 2 | 71 | 231 | 61 | 218 | 2.85e-20 | 86.7 |
MS.gene024390.t1 | MTR_4g104470 | 30.387 | 181 | 117 | 4 | 71 | 250 | 123 | 295 | 1.08e-16 | 78.2 |
MS.gene024390.t1 | MTR_4g104470 | 41.573 | 89 | 50 | 1 | 60 | 148 | 208 | 294 | 8.41e-14 | 70.1 |
MS.gene024390.t1 | MTR_1g097440 | 34.161 | 161 | 91 | 4 | 62 | 222 | 113 | 258 | 2.32e-16 | 78.6 |
MS.gene024390.t1 | MTR_3g075500 | 31.638 | 177 | 111 | 4 | 71 | 244 | 110 | 279 | 2.43e-16 | 77.0 |
MS.gene024390.t1 | MTR_3g075500 | 37.778 | 90 | 52 | 2 | 55 | 143 | 193 | 279 | 6.03e-12 | 64.7 |
MS.gene024390.t1 | MTR_1g064230 | 28.571 | 266 | 143 | 7 | 9 | 244 | 21 | 269 | 4.55e-16 | 76.3 |
MS.gene024390.t1 | MTR_3g075500 | 29.762 | 168 | 109 | 3 | 71 | 236 | 110 | 270 | 1.21e-14 | 72.0 |
MS.gene024390.t1 | MTR_2g097960 | 26.627 | 169 | 112 | 5 | 72 | 238 | 17 | 175 | 2.85e-12 | 66.2 |
MS.gene024390.t1 | MTR_6g040190 | 31.126 | 151 | 88 | 5 | 72 | 222 | 115 | 249 | 6.10e-12 | 65.5 |
MS.gene024390.t1 | MTR_7g118120 | 23.699 | 173 | 107 | 3 | 52 | 220 | 83 | 234 | 1.56e-11 | 63.9 |
MS.gene024390.t1 | MTR_5g030020 | 30.682 | 176 | 113 | 5 | 72 | 245 | 98 | 266 | 2.58e-11 | 63.2 |
MS.gene024390.t1 | MTR_3g099590 | 29.944 | 177 | 113 | 6 | 70 | 244 | 89 | 256 | 3.30e-11 | 62.4 |
MS.gene024390.t1 | MTR_1g061870 | 28.977 | 176 | 120 | 5 | 70 | 244 | 194 | 365 | 3.52e-11 | 63.2 |
MS.gene024390.t1 | MTR_1g115375 | 26.316 | 209 | 113 | 6 | 57 | 244 | 195 | 383 | 3.86e-11 | 62.8 |
MS.gene024390.t1 | MTR_6g040070 | 29.801 | 151 | 93 | 3 | 72 | 222 | 17 | 154 | 4.52e-11 | 63.2 |
MS.gene024390.t1 | MTR_4g085540 | 25.510 | 196 | 122 | 6 | 62 | 252 | 117 | 293 | 6.51e-11 | 62.4 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene024390.t1 | AT1G01080 | 54.359 | 195 | 81 | 3 | 64 | 253 | 102 | 293 | 1.37e-68 | 213 |
MS.gene024390.t1 | AT1G01080 | 54.082 | 196 | 81 | 4 | 64 | 253 | 102 | 294 | 7.10e-67 | 209 |
MS.gene024390.t1 | AT1G01080 | 54.237 | 177 | 73 | 3 | 64 | 235 | 102 | 275 | 2.66e-59 | 189 |
MS.gene024390.t1 | AT3G52150 | 29.646 | 226 | 139 | 6 | 37 | 247 | 33 | 253 | 1.37e-21 | 90.9 |
MS.gene024390.t1 | AT3G52150 | 29.646 | 226 | 139 | 6 | 37 | 247 | 33 | 253 | 1.37e-21 | 90.9 |
MS.gene024390.t1 | AT1G60000 | 30.741 | 270 | 141 | 11 | 1 | 244 | 1 | 250 | 3.90e-21 | 89.7 |
MS.gene024390.t1 | AT3G52380 | 31.285 | 179 | 119 | 4 | 67 | 242 | 113 | 290 | 7.04e-21 | 90.1 |
MS.gene024390.t1 | AT5G50250 | 30.570 | 193 | 119 | 5 | 59 | 250 | 108 | 286 | 9.60e-18 | 80.9 |
MS.gene024390.t1 | AT5G50250 | 38.462 | 91 | 54 | 1 | 58 | 148 | 197 | 285 | 6.81e-13 | 67.4 |
MS.gene024390.t1 | AT2G37220 | 28.230 | 209 | 116 | 4 | 61 | 246 | 82 | 279 | 1.14e-17 | 80.9 |
MS.gene024390.t1 | AT4G24770 | 32.571 | 175 | 109 | 4 | 71 | 244 | 151 | 317 | 2.56e-15 | 74.7 |
MS.gene024390.t1 | AT4G24770 | 41.026 | 78 | 46 | 0 | 71 | 148 | 245 | 322 | 8.78e-13 | 67.4 |
MS.gene024390.t1 | AT4G24770 | 32.571 | 175 | 109 | 4 | 71 | 244 | 151 | 317 | 2.56e-15 | 74.7 |
MS.gene024390.t1 | AT4G24770 | 41.026 | 78 | 46 | 0 | 71 | 148 | 245 | 322 | 8.78e-13 | 67.4 |
MS.gene024390.t1 | AT2G35410 | 31.937 | 191 | 121 | 6 | 57 | 245 | 86 | 269 | 3.35e-14 | 71.2 |
MS.gene024390.t1 | AT3G16380 | 29.670 | 182 | 114 | 4 | 72 | 252 | 23 | 191 | 1.63e-13 | 70.1 |
MS.gene024390.t1 | AT1G22760 | 28.342 | 187 | 121 | 4 | 34 | 220 | 103 | 276 | 5.12e-13 | 68.9 |
MS.gene024390.t1 | AT1G71770 | 28.342 | 187 | 121 | 4 | 36 | 222 | 115 | 288 | 4.98e-12 | 65.9 |
MS.gene024390.t1 | AT1G71770 | 28.342 | 187 | 121 | 4 | 36 | 222 | 115 | 288 | 4.98e-12 | 65.9 |
MS.gene024390.t1 | AT2G23350 | 25.668 | 187 | 116 | 5 | 72 | 252 | 136 | 305 | 1.49e-11 | 64.3 |
MS.gene024390.t1 | AT1G34140 | 32.215 | 149 | 86 | 5 | 72 | 220 | 33 | 166 | 5.39e-11 | 62.4 |
MS.gene024390.t1 | AT4G34110 | 26.882 | 186 | 115 | 6 | 72 | 252 | 126 | 295 | 6.67e-11 | 62.4 |
Find 60 sgRNAs with CRISPR-Local
Find 74 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AGACATCTCTTTGGTAAATT+TGG | 0.099306 | 7.2:-385288 | MS.gene024390:CDS |
AAGAGATGTCTCACGTCTTC+AGG | 0.315903 | 7.2:+385300 | None:intergenic |
TGTTGAGTATCACAGCTTCT+AGG | 0.370545 | 7.2:+385765 | None:intergenic |
TCTCACCAGTCTCTGCATTT+CGG | 0.377067 | 7.2:+385625 | None:intergenic |
CAGAGACTGGTGAGAGTAAA+GGG | 0.393341 | 7.2:-385617 | MS.gene024390:CDS |
CTCCAAGTAGTGGCTGCTTA+TGG | 0.394918 | 7.2:+385937 | None:intergenic |
TACCATAAGCAGCCACTACT+TGG | 0.428423 | 7.2:-385939 | MS.gene024390:CDS |
GGTGTTGCAAGATTTCAATC+AGG | 0.443133 | 7.2:-385247 | MS.gene024390:CDS |
TAACGAAGAGGAAGAGAAAG+AGG | 0.445652 | 7.2:+385965 | None:intergenic |
TTCCCAACATACACCTTATG+AGG | 0.456223 | 7.2:+385342 | None:intergenic |
GAAGGTTGCAGACGTAAACT+TGG | 0.462333 | 7.2:+385787 | None:intergenic |
TGTTGGTGGGCGCGAAATGC+GGG | 0.472414 | 7.2:-385445 | MS.gene024390:CDS |
CTTTGGTAAATTTGGAAATG+TGG | 0.479793 | 7.2:-385280 | MS.gene024390:CDS |
GCAGAGACTGGTGAGAGTAA+AGG | 0.480321 | 7.2:-385618 | MS.gene024390:CDS |
GTCCTCATAAGGTGTATGTT+GGG | 0.485859 | 7.2:-385344 | MS.gene024390:CDS |
ATACTATGAAGGTCCTCATA+AGG | 0.498833 | 7.2:-385355 | MS.gene024390:CDS |
TTGCAGACGTAAACTTGGGT+TGG | 0.499589 | 7.2:+385792 | None:intergenic |
GAAGACGTGAGACATCTCTT+TGG | 0.500754 | 7.2:-385297 | MS.gene024390:CDS |
GGGAGTGCTTATGTCACAAT+GGG | 0.508546 | 7.2:-385597 | MS.gene024390:CDS |
TCGTTTGAATTGAAGGATGT+TGG | 0.510713 | 7.2:-385462 | MS.gene024390:intron |
ACAACCACGTAAGTTGAAGC+TGG | 0.512125 | 7.2:-385820 | MS.gene024390:CDS |
CGCGAGGAGAAAGAAGGATA+AGG | 0.512495 | 7.2:+385876 | None:intergenic |
AATGCACTTGCTGCATTGGA+TGG | 0.517474 | 7.2:-385555 | MS.gene024390:CDS |
GGTCCTCATAAGGTGTATGT+TGG | 0.523656 | 7.2:-385345 | MS.gene024390:CDS |
GAAACACAGAGTAGCAGAGT+TGG | 0.527590 | 7.2:+385989 | None:intergenic |
GTATATAGTTCTTCTTCTCA+CGG | 0.533646 | 7.2:+385374 | None:intergenic |
TCTAGTGGTTAGAGAGGGTG+TGG | 0.535491 | 7.2:-385050 | MS.gene024390:CDS |
AGAAGAACTATATACTATGA+AGG | 0.536527 | 7.2:-385366 | MS.gene024390:CDS |
ATGTTGGTGGGCGCGAAATG+CGG | 0.539679 | 7.2:-385446 | MS.gene024390:CDS |
TATATAGTTCTTCTTCTCAC+GGG | 0.541659 | 7.2:+385375 | None:intergenic |
TCGAACTCTAGTGGTTAGAG+AGG | 0.547494 | 7.2:-385056 | MS.gene024390:CDS |
CAACCACGTAAGTTGAAGCT+GGG | 0.548485 | 7.2:-385819 | MS.gene024390:CDS |
AAGCAGCCACTACTTGGAGT+TGG | 0.552480 | 7.2:-385933 | MS.gene024390:CDS |
GAGGAGTGAAGAGATGAAGT+AGG | 0.557135 | 7.2:+385742 | None:intergenic |
CTGTGACGCGAGGAGAAAGA+AGG | 0.561006 | 7.2:+385870 | None:intergenic |
GTGTTGCAAGATTTCAATCA+GGG | 0.561480 | 7.2:-385246 | MS.gene024390:CDS |
TTTGAATTGAAGGATGTTGG+TGG | 0.563904 | 7.2:-385459 | MS.gene024390:intron |
GTTTGCCGAAATGCAGAGAC+TGG | 0.571702 | 7.2:-385630 | MS.gene024390:CDS |
TTGAATTGAAGGATGTTGGT+GGG | 0.579799 | 7.2:-385458 | MS.gene024390:intron |
GGTTTCATTGAGGGACAAAG+AGG | 0.584074 | 7.2:+385167 | None:intergenic |
GAGTATCCAACTCCAAGTAG+TGG | 0.587862 | 7.2:+385927 | None:intergenic |
GAGTATCACAGCTTCTAGGA+AGG | 0.590293 | 7.2:+385769 | None:intergenic |
CTTCATCTCTTCACTCCTCA+CGG | 0.594839 | 7.2:-385738 | MS.gene024390:CDS |
TTCCCCAGCTTCAACTTACG+TGG | 0.601446 | 7.2:+385816 | None:intergenic |
AGGGAGTGCTTATGTCACAA+TGG | 0.612091 | 7.2:-385598 | MS.gene024390:CDS |
AAGGTTGCAGACGTAAACTT+GGG | 0.613456 | 7.2:+385788 | None:intergenic |
TTGAGAGAGATAAGAGACAA+AGG | 0.615725 | 7.2:+385203 | None:intergenic |
AATGGACGCGCTGTGACGCG+AGG | 0.621619 | 7.2:+385860 | None:intergenic |
ACTTGCTGCATTGGATGGAT+CGG | 0.623524 | 7.2:-385550 | MS.gene024390:intron |
TGGAAATGTGGCTAGTGTGA+GGG | 0.626364 | 7.2:-385268 | MS.gene024390:CDS |
ATAGTTCTTCTTCTCACGGG+AGG | 0.629773 | 7.2:+385378 | None:intergenic |
TTGGAAATGTGGCTAGTGTG+AGG | 0.645229 | 7.2:-385269 | MS.gene024390:CDS |
ACGTACCTCGGTAGATAGAA+CGG | 0.653839 | 7.2:+385713 | None:intergenic |
CGAACTCTAGTGGTTAGAGA+GGG | 0.654487 | 7.2:-385055 | MS.gene024390:CDS |
AACCACGTAAGTTGAAGCTG+GGG | 0.663989 | 7.2:-385818 | MS.gene024390:CDS |
TGTTGCAAGATTTCAATCAG+GGG | 0.681995 | 7.2:-385245 | MS.gene024390:CDS |
CTTATGGTAGAGTAACGAAG+AGG | 0.714741 | 7.2:+385953 | None:intergenic |
AAGAGACAAAGGCATAGACA+CGG | 0.730141 | 7.2:+385214 | None:intergenic |
GTAGATAGAACGGTACCGTG+AGG | 0.731002 | 7.2:+385723 | None:intergenic |
CGGTACCGTTCTATCTACCG+AGG | 0.742490 | 7.2:-385718 | MS.gene024390:intron |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
! | AGAAGAACTATATACTATGA+AGG | - | chr7.2:385663-385682 | MS.gene024390:intron | 25.0% |
!! | ATATTTTACGGTTTCATTGA+GGG | + | chr7.2:385874-385893 | None:intergenic | 25.0% |
!!! | TTGTTTTTCGTTTGAATTGA+AGG | - | chr7.2:385560-385579 | MS.gene024390:CDS | 25.0% |
AGACATCTCTTTGGTAAATT+TGG | - | chr7.2:385741-385760 | MS.gene024390:CDS | 30.0% | |
CTTTGGTAAATTTGGAAATG+TGG | - | chr7.2:385749-385768 | MS.gene024390:CDS | 30.0% | |
GCAGTAGAAAAAGTGAAAAA+AGG | + | chr7.2:385904-385923 | None:intergenic | 30.0% | |
GTAGAAAAAGTGAAAAAAGG+TGG | + | chr7.2:385901-385920 | None:intergenic | 30.0% | |
GTATATAGTTCTTCTTCTCA+CGG | + | chr7.2:385658-385677 | None:intergenic | 30.0% | |
TATATAGTTCTTCTTCTCAC+GGG | + | chr7.2:385657-385676 | None:intergenic | 30.0% | |
! | CATATTTTACGGTTTCATTG+AGG | + | chr7.2:385875-385894 | None:intergenic | 30.0% |
! | TTCTTCTTCGTTTTCTACAA+TGG | + | chr7.2:385190-385209 | None:intergenic | 30.0% |
ATACTATGAAGGTCCTCATA+AGG | - | chr7.2:385674-385693 | MS.gene024390:intron | 35.0% | |
GAAAAAGTGAAAAAAGGTGG+AGG | + | chr7.2:385898-385917 | None:intergenic | 35.0% | |
GTGTTGCAAGATTTCAATCA+GGG | - | chr7.2:385783-385802 | MS.gene024390:CDS | 35.0% | |
TCGTTTGAATTGAAGGATGT+TGG | - | chr7.2:385567-385586 | MS.gene024390:CDS | 35.0% | |
TGTTGCAAGATTTCAATCAG+GGG | - | chr7.2:385784-385803 | MS.gene024390:CDS | 35.0% | |
TTGAATTGAAGGATGTTGGT+GGG | - | chr7.2:385571-385590 | MS.gene024390:CDS | 35.0% | |
TTGAGAGAGATAAGAGACAA+AGG | + | chr7.2:385829-385848 | None:intergenic | 35.0% | |
TTTGAATTGAAGGATGTTGG+TGG | - | chr7.2:385570-385589 | MS.gene024390:CDS | 35.0% | |
! | TAAAAATGCACTTGCTGCAT+TGG | - | chr7.2:385470-385489 | MS.gene024390:intron | 35.0% |
! | TTGTTCTTGCAGCAATTTTG+TGG | - | chr7.2:385950-385969 | MS.gene024390:CDS | 35.0% |
!! | AAAGGTGGAGGCATATTTTA+CGG | + | chr7.2:385886-385905 | None:intergenic | 35.0% |
AAGGTTGCAGACGTAAACTT+GGG | + | chr7.2:385244-385263 | None:intergenic | 40.0% | |
AGCAACATACTTACGTACCT+CGG | + | chr7.2:385331-385350 | None:intergenic | 40.0% | |
CTTATGGTAGAGTAACGAAG+AGG | + | chr7.2:385079-385098 | None:intergenic | 40.0% | |
GTAATGTAATGCTGTGCTGT+AGG | - | chr7.2:385377-385396 | MS.gene024390:CDS | 40.0% | |
GTCCTCATAAGGTGTATGTT+GGG | - | chr7.2:385685-385704 | MS.gene024390:intron | 40.0% | |
TAACGAAGAGGAAGAGAAAG+AGG | + | chr7.2:385067-385086 | None:intergenic | 40.0% | |
TGTTGAGTATCACAGCTTCT+AGG | + | chr7.2:385267-385286 | None:intergenic | 40.0% | |
TTCCCAACATACACCTTATG+AGG | + | chr7.2:385690-385709 | None:intergenic | 40.0% | |
! | AAGAGACAAAGGCATAGACA+CGG | + | chr7.2:385818-385837 | None:intergenic | 40.0% |
! | ATTTTGTGGTCGAACTCTAG+TGG | - | chr7.2:385964-385983 | MS.gene024390:CDS | 40.0% |
! | GGTGTTGCAAGATTTCAATC+AGG | - | chr7.2:385782-385801 | MS.gene024390:CDS | 40.0% |
AAGAGATGTCTCACGTCTTC+AGG | + | chr7.2:385732-385751 | None:intergenic | 45.0% | |
ACGTACCTCGGTAGATAGAA+CGG | + | chr7.2:385319-385338 | None:intergenic | 45.0% | |
ATAGTTCTTCTTCTCACGGG+AGG | + | chr7.2:385654-385673 | None:intergenic | 45.0% | |
CAGAGACTGGTGAGAGTAAA+GGG | - | chr7.2:385412-385431 | MS.gene024390:CDS | 45.0% | |
CGAACTCTAGTGGTTAGAGA+GGG | - | chr7.2:385974-385993 | MS.gene024390:CDS | 45.0% | |
CTTCATCTCTTCACTCCTCA+CGG | - | chr7.2:385291-385310 | MS.gene024390:CDS | 45.0% | |
GAAACACAGAGTAGCAGAGT+TGG | + | chr7.2:385043-385062 | None:intergenic | 45.0% | |
GAAGACGTGAGACATCTCTT+TGG | - | chr7.2:385732-385751 | MS.gene024390:CDS | 45.0% | |
GAAGGTTGCAGACGTAAACT+TGG | + | chr7.2:385245-385264 | None:intergenic | 45.0% | |
GAGGAGTGAAGAGATGAAGT+AGG | + | chr7.2:385290-385309 | None:intergenic | 45.0% | |
GAGTATCCAACTCCAAGTAG+TGG | + | chr7.2:385105-385124 | None:intergenic | 45.0% | |
GCTGCAAGAACAAGACTAGT+AGG | + | chr7.2:385943-385962 | None:intergenic | 45.0% | |
GGTCCTCATAAGGTGTATGT+TGG | - | chr7.2:385684-385703 | MS.gene024390:intron | 45.0% | |
GGTTTCATTGAGGGACAAAG+AGG | + | chr7.2:385865-385884 | None:intergenic | 45.0% | |
TACCATAAGCAGCCACTACT+TGG | - | chr7.2:385090-385109 | MS.gene024390:intron | 45.0% | |
TCGAACTCTAGTGGTTAGAG+AGG | - | chr7.2:385973-385992 | MS.gene024390:CDS | 45.0% | |
TCTCACCAGTCTCTGCATTT+CGG | + | chr7.2:385407-385426 | None:intergenic | 45.0% | |
TGGAAATGTGGCTAGTGTGA+GGG | - | chr7.2:385761-385780 | MS.gene024390:CDS | 45.0% | |
TTGCAGACGTAAACTTGGGT+TGG | + | chr7.2:385240-385259 | None:intergenic | 45.0% | |
TTGGAAATGTGGCTAGTGTG+AGG | - | chr7.2:385760-385779 | MS.gene024390:CDS | 45.0% | |
! | AACCACGTAAGTTGAAGCTG+GGG | - | chr7.2:385211-385230 | MS.gene024390:CDS | 45.0% |
! | AATGCACTTGCTGCATTGGA+TGG | - | chr7.2:385474-385493 | MS.gene024390:intron | 45.0% |
! | ACAACCACGTAAGTTGAAGC+TGG | - | chr7.2:385209-385228 | MS.gene024390:CDS | 45.0% |
! | ACTTGCTGCATTGGATGGAT+CGG | - | chr7.2:385479-385498 | MS.gene024390:intron | 45.0% |
! | CAACCACGTAAGTTGAAGCT+GGG | - | chr7.2:385210-385229 | MS.gene024390:CDS | 45.0% |
! | GAGTATCACAGCTTCTAGGA+AGG | + | chr7.2:385263-385282 | None:intergenic | 45.0% |
!! | AGGGAGTGCTTATGTCACAA+TGG | - | chr7.2:385431-385450 | MS.gene024390:CDS | 45.0% |
!! | GGGAGTGCTTATGTCACAAT+GGG | - | chr7.2:385432-385451 | MS.gene024390:CDS | 45.0% |
AAGCAGCCACTACTTGGAGT+TGG | - | chr7.2:385096-385115 | MS.gene024390:intron | 50.0% | |
CGCGAGGAGAAAGAAGGATA+AGG | + | chr7.2:385156-385175 | None:intergenic | 50.0% | |
CTCCAAGTAGTGGCTGCTTA+TGG | + | chr7.2:385095-385114 | None:intergenic | 50.0% | |
GCAGAGACTGGTGAGAGTAA+AGG | - | chr7.2:385411-385430 | MS.gene024390:CDS | 50.0% | |
GTAGATAGAACGGTACCGTG+AGG | + | chr7.2:385309-385328 | None:intergenic | 50.0% | |
GTTTGCCGAAATGCAGAGAC+TGG | - | chr7.2:385399-385418 | MS.gene024390:CDS | 50.0% | |
TCTAGTGGTTAGAGAGGGTG+TGG | - | chr7.2:385979-385998 | MS.gene024390:CDS | 50.0% | |
TTCCCCAGCTTCAACTTACG+TGG | + | chr7.2:385216-385235 | None:intergenic | 50.0% | |
CGGTACCGTTCTATCTACCG+AGG | - | chr7.2:385311-385330 | MS.gene024390:CDS | 55.0% | |
CTGTGACGCGAGGAGAAAGA+AGG | + | chr7.2:385162-385181 | None:intergenic | 55.0% | |
! | ATGTTGGTGGGCGCGAAATG+CGG | - | chr7.2:385583-385602 | MS.gene024390:CDS | 55.0% |
! | TGTTGGTGGGCGCGAAATGC+GGG | - | chr7.2:385584-385603 | MS.gene024390:CDS | 60.0% |
AATGGACGCGCTGTGACGCG+AGG | + | chr7.2:385172-385191 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.2 | gene | 385033 | 386018 | 385033 | ID=MS.gene024390 |
chr7.2 | mRNA | 385033 | 386018 | 385033 | ID=MS.gene024390.t1;Parent=MS.gene024390 |
chr7.2 | exon | 385719 | 386018 | 385719 | ID=MS.gene024390.t1.exon1;Parent=MS.gene024390.t1 |
chr7.2 | CDS | 385719 | 386018 | 385719 | ID=cds.MS.gene024390.t1;Parent=MS.gene024390.t1 |
chr7.2 | exon | 385551 | 385652 | 385551 | ID=MS.gene024390.t1.exon2;Parent=MS.gene024390.t1 |
chr7.2 | CDS | 385551 | 385652 | 385551 | ID=cds.MS.gene024390.t1;Parent=MS.gene024390.t1 |
chr7.2 | exon | 385167 | 385469 | 385167 | ID=MS.gene024390.t1.exon3;Parent=MS.gene024390.t1 |
chr7.2 | CDS | 385167 | 385469 | 385167 | ID=cds.MS.gene024390.t1;Parent=MS.gene024390.t1 |
chr7.2 | exon | 385033 | 385089 | 385033 | ID=MS.gene024390.t1.exon4;Parent=MS.gene024390.t1 |
chr7.2 | CDS | 385033 | 385089 | 385033 | ID=cds.MS.gene024390.t1;Parent=MS.gene024390.t1 |
Gene Sequence |
Protein sequence |