AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene001756

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene001756.t1 MTR_8g031560 94.643 280 15 0 1 280 1 280 0.0 547
MS.gene001756.t1 MTR_8g107310 75.601 291 58 3 2 280 3 292 1.14e-150 423
MS.gene001756.t1 MTR_5g017130 39.568 139 72 4 147 280 45 176 1.14e-19 84.3
MS.gene001756.t1 MTR_1g054675 48.438 64 33 0 199 262 43 106 2.09e-11 62.8
MS.gene001756.t1 MTR_1g080390 36.842 76 48 0 203 278 286 361 2.63e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene001756.t1 AT3G11400 67.708 288 74 4 9 280 10 294 1.79e-139 395
MS.gene001756.t1 AT3G11400 62.222 315 73 5 9 280 10 321 2.10e-135 385
MS.gene001756.t1 AT5G06000 58.621 290 96 6 5 279 6 286 1.23e-115 335
MS.gene001756.t1 AT4G34110 39.048 105 55 3 175 279 195 290 6.68e-12 65.9
MS.gene001756.t1 AT3G14100 40.000 90 51 1 194 280 136 225 1.24e-11 65.1
MS.gene001756.t1 AT1G49760 49.254 67 33 1 201 267 226 291 3.90e-11 63.5
MS.gene001756.t1 AT1G49760 49.254 67 33 1 201 267 226 291 3.90e-11 63.5
MS.gene001756.t1 AT5G64200 35.556 90 55 1 186 275 6 92 4.15e-11 62.8
MS.gene001756.t1 AT5G64200 35.556 90 55 1 186 275 6 92 4.15e-11 62.8
MS.gene001756.t1 AT1G54080 40.000 90 51 1 194 280 140 229 6.27e-11 62.8
MS.gene001756.t1 AT2G23350 41.935 93 49 2 175 267 205 292 8.62e-11 62.8

Find 79 sgRNAs with CRISPR-Local

Find 121 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTACCACCGCGTCAGGTAAT+TGG 0.264924 8.3:-63003894 MS.gene001756:CDS
CGACGTGAATGGTCGAAATT+TGG 0.300840 8.3:-63003741 MS.gene001756:CDS
GTTTAGGTTTAGGTTGTTCT+TGG 0.304313 8.3:+63002149 None:intergenic
ATTTGATGAAGATGATAATA+AGG 0.305713 8.3:-63003832 MS.gene001756:CDS
GTTGAAGCGGGTGCTGCTGC+TGG 0.324319 8.3:+63002488 None:intergenic
GGGTGGCCCATTCAACCTTC+AGG 0.339818 8.3:+63002171 None:intergenic
TTTAGGTTTAGGTTGTTCTT+GGG 0.346207 8.3:+63002150 None:intergenic
CTTGAACGTCCTAAGCCTAT+TGG 0.349362 8.3:-63003657 MS.gene001756:intron
GGTTGTGTGAGATTCCTATT+TGG 0.350671 8.3:+63002536 None:intergenic
CCGAAAAGCTCATGCAAATC+AGG 0.363425 8.3:+63002341 None:intergenic
TTACCTGACGCGGTGGTAAC+AGG 0.379284 8.3:+63003898 None:intergenic
GCTTTGTCAACTTTGTCAAC+AGG 0.382048 8.3:-63002250 MS.gene001756:CDS
AAGGCTACGTTGGGGAGAAT+TGG 0.383267 8.3:-63003952 MS.gene001756:CDS
TTTCCTGTTACCACCGCGTC+AGG 0.388708 8.3:-63003901 MS.gene001756:CDS
GGACCCAGATGCTGTTCTTA+TGG 0.393050 8.3:-63002606 MS.gene001756:CDS
GGACTGCAAGGTGTCCAAAT+AGG 0.396640 8.3:-63002550 MS.gene001756:CDS
AGTTACTCGCACAAGGAAAC+TGG 0.405837 8.3:-63003796 MS.gene001756:CDS
ACAATCCCTGAGCAAAAGCC+TGG 0.406374 8.3:-63002629 MS.gene001756:CDS
TCTCCCCAACGTAGCCTTGT+CGG 0.412486 8.3:+63003957 None:intergenic
CCTCGTGTCCTCCGAGAGAT+TGG 0.415176 8.3:+63002367 None:intergenic
TTATGGTATGCAGGACTTGT+GGG 0.433263 8.3:-63002589 MS.gene001756:CDS
ATCTCATCCTGAAGGTTGAA+TGG 0.441177 8.3:-63002178 MS.gene001756:CDS
CCAACCGACAAGGCTACGTT+GGG 0.459165 8.3:-63003961 MS.gene001756:CDS
AGGAGGTACATATGCATTGT+TGG 0.465772 8.3:+63002466 None:intergenic
GCTTGAGAGCTGGTGCAGAT+AGG 0.483886 8.3:-63002442 MS.gene001756:CDS
CATACCATAAGAACAGCATC+TGG 0.484455 8.3:+63002602 None:intergenic
ATGCAGGACTTGTGGGAAGA+AGG 0.493800 8.3:-63002582 MS.gene001756:CDS
ATGCTGTTCTTATGGTATGC+AGG 0.495611 8.3:-63002598 MS.gene001756:CDS
TCTCATCCTGAAGGTTGAAT+GGG 0.496659 8.3:-63002177 MS.gene001756:CDS
AAATAGGAATCTCACACAAC+CGG 0.499063 8.3:-63002534 MS.gene001756:CDS
AGAGAGATACCAATAGGCTT+AGG 0.499302 8.3:+63003648 None:intergenic
TGCAGGACTTGTGGGAAGAA+GGG 0.515384 8.3:-63002581 MS.gene001756:CDS
ATTAACAAACTGAATGGCTA+TGG 0.523336 8.3:-63002209 MS.gene001756:CDS
GGTTTAGGTTGTTCTTGGGG+TGG 0.525184 8.3:+63002154 None:intergenic
GGAATGATGAGAACTCTGTC+CGG 0.525892 8.3:-63002394 MS.gene001756:CDS
GAAGCGGGTGCTGCTGCTGG+AGG 0.526888 8.3:+63002491 None:intergenic
CCTCCGAGAGATTGGTTACC+CGG 0.528125 8.3:+63002375 None:intergenic
CCCAACGTAGCCTTGTCGGT+TGG 0.528158 8.3:+63003961 None:intergenic
CTTTGTCAACTTTGTCAACA+GGG 0.528739 8.3:-63002249 MS.gene001756:CDS
CTTATGGTATGCAGGACTTG+TGG 0.530657 8.3:-63002590 MS.gene001756:CDS
GTAATTGGACCTGACGAAAA+CGG 0.532144 8.3:-63003879 MS.gene001756:CDS
TTAGGTTTAGGTTGTTCTTG+GGG 0.533486 8.3:+63002151 None:intergenic
AGAACAGCATCTGGGTCCCC+AGG 0.535062 8.3:+63002611 None:intergenic
GAATGATGAGAACTCTGTCC+GGG 0.539563 8.3:-63002393 MS.gene001756:CDS
TATGCATTGTTGGTTGAAGC+GGG 0.539669 8.3:+63002476 None:intergenic
TTGGACACCTTGCAGTCCAA+TGG 0.539847 8.3:+63002555 None:intergenic
TCTGCACCAGCTCTCAAGCT+AGG 0.542595 8.3:+63002446 None:intergenic
AGAGCTGGTGCAGATAGGAC+TGG 0.551252 8.3:-63002437 MS.gene001756:CDS
AGAGCTATTAACAAACTGAA+TGG 0.561521 8.3:-63002215 MS.gene001756:CDS
GTGGGAAGAAGGGTGACCAT+TGG 0.569169 8.3:-63002571 MS.gene001756:CDS
CAATCCCTGAGCAAAAGCCT+GGG 0.573990 8.3:-63002628 MS.gene001756:CDS
TTATCAACAAAATCGTTAGC+CGG 0.574049 8.3:+63002515 None:intergenic
ATATGCATTGTTGGTTGAAG+CGG 0.574935 8.3:+63002475 None:intergenic
GCGCTGTTGAACGACGTGAA+TGG 0.578162 8.3:-63003752 MS.gene001756:CDS
CCAATCTCTCGGAGGACACG+AGG 0.579645 8.3:-63002367 MS.gene001756:CDS
GAGGGTCAGACATGAGGCGC+AGG 0.579803 8.3:-63002415 MS.gene001756:CDS
GAGCAGAGTATATGTTGCTA+TGG 0.586610 8.3:-63002303 MS.gene001756:CDS
CTCTGATGAACCAACCGACA+AGG 0.596621 8.3:-63003971 MS.gene001756:CDS
ACCAACCGACAAGGCTACGT+TGG 0.598787 8.3:-63003962 MS.gene001756:CDS
GTACCTCCTAGCTTGAGAGC+TGG 0.608499 8.3:-63002452 MS.gene001756:CDS
AGGGTGACCATTGGACTGCA+AGG 0.613965 8.3:-63002562 MS.gene001756:CDS
TGTCCGGGTAACCAATCTCT+CGG 0.618499 8.3:-63002378 MS.gene001756:CDS
CTACGACAATCTCATCCTGA+AGG 0.621391 8.3:-63002186 MS.gene001756:CDS
GGACTGGAGGGTCAGACATG+AGG 0.624231 8.3:-63002421 MS.gene001756:CDS
AAAACACTGGCACGAGTAGG+GGG 0.626917 8.3:-63002277 MS.gene001756:CDS
GCTGGTGCAGATAGGACTGG+AGG 0.628048 8.3:-63002434 MS.gene001756:CDS
CAATCTCTCGGAGGACACGA+GGG 0.632835 8.3:-63002366 MS.gene001756:CDS
TCACAACAGTTACTCGCACA+AGG 0.638520 8.3:-63003803 MS.gene001756:CDS
CTGGTGCAGATAGGACTGGA+GGG 0.640033 8.3:-63002433 MS.gene001756:CDS
ATACCATAAGAACAGCATCT+GGG 0.648596 8.3:+63002603 None:intergenic
GATGCTGTGAATGAAGATGT+TGG 0.655135 8.3:-63003717 MS.gene001756:CDS
GCACCAGCTCTCAAGCTAGG+AGG 0.655438 8.3:+63002449 None:intergenic
TGAATGAAGATGTTGGTAGT+CGG 0.664689 8.3:-63003710 MS.gene001756:CDS
GGTCCAATTACCTGACGCGG+TGG 0.688497 8.3:+63003891 None:intergenic
TCAGGTCCAATTACCTGACG+CGG 0.698146 8.3:+63003888 None:intergenic
AATCCCTGAGCAAAAGCCTG+GGG 0.721772 8.3:-63002627 MS.gene001756:CDS
CCGGGTAACCAATCTCTCGG+AGG 0.724245 8.3:-63002375 MS.gene001756:CDS
CAACCGACAAGGCTACGTTG+GGG 0.753724 8.3:-63003960 MS.gene001756:CDS
GAATTGGAAGAAGACGACGA+CGG 0.773946 8.3:-63003936 MS.gene001756:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ACAAAAAAAATTATGGTCAA+GGG - chr8.3:63002923-63002942 MS.gene001756:intron 20.0%
!! ATTTGATGAAGATGATAATA+AGG - chr8.3:63002303-63002322 MS.gene001756:CDS 20.0%
!! CAATTCATAGTTTCAATAAA+AGG + chr8.3:63003121-63003140 None:intergenic 20.0%
!! TTTCTTGATTAAATGAACTA+GGG - chr8.3:63003231-63003250 MS.gene001756:intron 20.0%
!!! GGTTTTGACAAAAAAAATTA+TGG - chr8.3:63002916-63002935 MS.gene001756:intron 20.0%
!!! TTTTCTTGATTAAATGAACT+AGG - chr8.3:63003230-63003249 MS.gene001756:intron 20.0%
! GACAAAAAAAATTATGGTCA+AGG - chr8.3:63002922-63002941 MS.gene001756:intron 25.0%
! TATATCTTGCAATTGTTAAC+AGG - chr8.3:63003479-63003498 MS.gene001756:intron 25.0%
! TTGCATTTCAATTTGTACTT+GGG - chr8.3:63003294-63003313 MS.gene001756:intron 25.0%
! TTTGCATTTCAATTTGTACT+TGG - chr8.3:63003293-63003312 MS.gene001756:intron 25.0%
!!! TTTACGTTTTTGTTGATTCT+GGG - chr8.3:63002616-63002635 MS.gene001756:CDS 25.0%
!!! TTTTACGTTTTTGTTGATTC+TGG - chr8.3:63002615-63002634 MS.gene001756:CDS 25.0%
AACCCTATGAAGCAATAAAA+CGG + chr8.3:63002900-63002919 None:intergenic 30.0%
AGACACGAGCAATAATTTAA+TGG + chr8.3:63002841-63002860 None:intergenic 30.0%
AGAGCTATTAACAAACTGAA+TGG - chr8.3:63003920-63003939 MS.gene001756:CDS 30.0%
ATTAACAAACTGAATGGCTA+TGG - chr8.3:63003926-63003945 MS.gene001756:CDS 30.0%
CAGTGTAAAATAGTGTGATT+TGG - chr8.3:63002784-63002803 MS.gene001756:intron 30.0%
CTTGAATAACAAATCATGAG+TGG - chr8.3:63003399-63003418 MS.gene001756:intron 30.0%
GTTAGTGTCAATATCATGAT+CGG - chr8.3:63002865-63002884 MS.gene001756:intron 30.0%
TAGCATTTGCAAAATCATAG+TGG - chr8.3:63003011-63003030 MS.gene001756:intron 30.0%
TTATCAACAAAATCGTTAGC+CGG + chr8.3:63003623-63003642 None:intergenic 30.0%
! AATTTCATACACTGGAGTTT+TGG - chr8.3:63003176-63003195 MS.gene001756:intron 30.0%
!! CACTCATGATTTGTTATTCA+AGG + chr8.3:63003401-63003420 None:intergenic 30.0%
AAATAGGAATCTCACACAAC+CGG - chr8.3:63003601-63003620 MS.gene001756:intron 35.0%
ACGCTCAAGAATGATTGTAT+TGG - chr8.3:63003265-63003284 MS.gene001756:intron 35.0%
ATACCATAAGAACAGCATCT+GGG + chr8.3:63003535-63003554 None:intergenic 35.0%
CTTTGTCAACTTTGTCAACA+GGG - chr8.3:63003886-63003905 MS.gene001756:CDS 35.0%
GTTGCTATGGATAAAAACAC+TGG - chr8.3:63003845-63003864 MS.gene001756:CDS 35.0%
! ATATGCATTGTTGGTTGAAG+CGG + chr8.3:63003663-63003682 None:intergenic 35.0%
!! GTCCGTTTTATTGCTTCATA+GGG - chr8.3:63002895-63002914 MS.gene001756:intron 35.0%
!! TGAATGAAGATGTTGGTAGT+CGG - chr8.3:63002425-63002444 MS.gene001756:CDS 35.0%
!! TGTCCGTTTTATTGCTTCAT+AGG - chr8.3:63002894-63002913 MS.gene001756:intron 35.0%
!!! CTCTCTCTCGTTTTAGTTTT+TGG - chr8.3:63002588-63002607 MS.gene001756:CDS 35.0%
AGAGAGAGAGAGATACCAAT+AGG + chr8.3:63002496-63002515 None:intergenic 40.0%
AGAGAGATACCAATAGGCTT+AGG + chr8.3:63002490-63002509 None:intergenic 40.0%
ATAAAAACACTGGCACGAGT+AGG - chr8.3:63003855-63003874 MS.gene001756:CDS 40.0%
ATCTCATCCTGAAGGTTGAA+TGG - chr8.3:63003957-63003976 MS.gene001756:CDS 40.0%
ATGCTGTTCTTATGGTATGC+AGG - chr8.3:63003537-63003556 MS.gene001756:intron 40.0%
CAGTGCTCAATTTCATACAC+TGG - chr8.3:63003168-63003187 MS.gene001756:intron 40.0%
CATACCATAAGAACAGCATC+TGG + chr8.3:63003536-63003555 None:intergenic 40.0%
CCAGGATTTCTCACTTGTAT+AGG - chr8.3:63003325-63003344 MS.gene001756:intron 40.0%
CCTATACAAGTGAGAAATCC+TGG + chr8.3:63003328-63003347 None:intergenic 40.0%
GAGCAGAGTATATGTTGCTA+TGG - chr8.3:63003832-63003851 MS.gene001756:CDS 40.0%
GATGCTGTGAATGAAGATGT+TGG - chr8.3:63002418-63002437 MS.gene001756:CDS 40.0%
GCAACGATTTAGTGCATGTT+CGG + chr8.3:63003069-63003088 None:intergenic 40.0%
GCTTTGTCAACTTTGTCAAC+AGG - chr8.3:63003885-63003904 MS.gene001756:CDS 40.0%
GGTTGTGTGAGATTCCTATT+TGG + chr8.3:63003602-63003621 None:intergenic 40.0%
GTAATTGGACCTGACGAAAA+CGG - chr8.3:63002256-63002275 MS.gene001756:CDS 40.0%
TAAAAACACTGGCACGAGTA+GGG - chr8.3:63003856-63003875 MS.gene001756:CDS 40.0%
TCAAGGGTTTAAGTGCATGT+TGG - chr8.3:63002939-63002958 MS.gene001756:intron 40.0%
TCTCATCCTGAAGGTTGAAT+GGG - chr8.3:63003958-63003977 MS.gene001756:CDS 40.0%
TGTACTTGGGATGAATTACC+AGG - chr8.3:63003307-63003326 MS.gene001756:intron 40.0%
TTAAGTGCATGTTGGCATCA+TGG - chr8.3:63002947-63002966 MS.gene001756:intron 40.0%
TTATGGTATGCAGGACTTGT+GGG - chr8.3:63003546-63003565 MS.gene001756:intron 40.0%
! AGGAGGTACATATGCATTGT+TGG + chr8.3:63003672-63003691 None:intergenic 40.0%
! TATGCATTGTTGGTTGAAGC+GGG + chr8.3:63003662-63003681 None:intergenic 40.0%
! TTCTTGATTCCGTTTTCGTC+AGG + chr8.3:63002268-63002287 None:intergenic 40.0%
!! CCTGATTTGCATGAGCTTTT+CGG - chr8.3:63003794-63003813 MS.gene001756:CDS 40.0%
AAAAACACTGGCACGAGTAG+GGG - chr8.3:63003857-63003876 MS.gene001756:CDS 45.0%
AGTTACTCGCACAAGGAAAC+TGG - chr8.3:63002339-63002358 MS.gene001756:CDS 45.0%
CCGAAAAGCTCATGCAAATC+AGG + chr8.3:63003797-63003816 None:intergenic 45.0%
CGACGTGAATGGTCGAAATT+TGG - chr8.3:63002394-63002413 MS.gene001756:CDS 45.0%
CTACGACAATCTCATCCTGA+AGG - chr8.3:63003949-63003968 MS.gene001756:CDS 45.0%
CTTATGGTATGCAGGACTTG+TGG - chr8.3:63003545-63003564 MS.gene001756:intron 45.0%
CTTGAACGTCCTAAGCCTAT+TGG - chr8.3:63002478-63002497 MS.gene001756:CDS 45.0%
GAATGATGAGAACTCTGTCC+GGG - chr8.3:63003742-63003761 MS.gene001756:CDS 45.0%
GAATTGGAAGAAGACGACGA+CGG - chr8.3:63002199-63002218 MS.gene001756:CDS 45.0%
GGAATGATGAGAACTCTGTC+CGG - chr8.3:63003741-63003760 MS.gene001756:CDS 45.0%
TCACAACAGTTACTCGCACA+AGG - chr8.3:63002332-63002351 MS.gene001756:CDS 45.0%
! CATGAGCTTTTCGGCACTTT+TGG - chr8.3:63003803-63003822 MS.gene001756:CDS 45.0%
AAAACACTGGCACGAGTAGG+GGG - chr8.3:63003858-63003877 MS.gene001756:CDS 50.0%
AAGGCTACGTTGGGGAGAAT+TGG - chr8.3:63002183-63002202 MS.gene001756:CDS 50.0%
AATCCCTGAGCAAAAGCCTG+GGG - chr8.3:63003508-63003527 MS.gene001756:intron 50.0%
ACAATCCCTGAGCAAAAGCC+TGG - chr8.3:63003506-63003525 MS.gene001756:intron 50.0%
AGTGCATGTTGGCATCATGG+TGG - chr8.3:63002950-63002969 MS.gene001756:intron 50.0%
ATGCAGGACTTGTGGGAAGA+AGG - chr8.3:63003553-63003572 MS.gene001756:intron 50.0%
CAATCCCTGAGCAAAAGCCT+GGG - chr8.3:63003507-63003526 MS.gene001756:intron 50.0%
CTCTGATGAACCAACCGACA+AGG - chr8.3:63002164-63002183 MS.gene001756:CDS 50.0%
GGACCCAGATGCTGTTCTTA+TGG - chr8.3:63003529-63003548 MS.gene001756:intron 50.0%
GTAGCAAGCCACTGTGATTC+TGG + chr8.3:63002980-63002999 None:intergenic 50.0%
GTGCATGTTGGCATCATGGT+GGG - chr8.3:63002951-63002970 MS.gene001756:intron 50.0%
TCAGGTCCAATTACCTGACG+CGG + chr8.3:63002250-63002269 None:intergenic 50.0%
TGCAGGACTTGTGGGAAGAA+GGG - chr8.3:63003554-63003573 MS.gene001756:intron 50.0%
TGTCCGGGTAACCAATCTCT+CGG - chr8.3:63003757-63003776 MS.gene001756:CDS 50.0%
TTACCACCGCGTCAGGTAAT+TGG - chr8.3:63002241-63002260 MS.gene001756:CDS 50.0%
TTGGACACCTTGCAGTCCAA+TGG + chr8.3:63003583-63003602 None:intergenic 50.0%
! AGGCTTTTGCTCAGGGATTG+TGG + chr8.3:63003507-63003526 None:intergenic 50.0%
! GGACTGCAAGGTGTCCAAAT+AGG - chr8.3:63003585-63003604 MS.gene001756:intron 50.0%
ACCAACCGACAAGGCTACGT+TGG - chr8.3:63002173-63002192 MS.gene001756:CDS 55.0%
AGAGCTGGTGCAGATAGGAC+TGG - chr8.3:63003698-63003717 MS.gene001756:CDS 55.0%
AGGGTGACCATTGGACTGCA+AGG - chr8.3:63003573-63003592 MS.gene001756:intron 55.0%
CAACCGACAAGGCTACGTTG+GGG - chr8.3:63002175-63002194 MS.gene001756:CDS 55.0%
CAATCTCTCGGAGGACACGA+GGG - chr8.3:63003769-63003788 MS.gene001756:CDS 55.0%
CCAACCGACAAGGCTACGTT+GGG - chr8.3:63002174-63002193 MS.gene001756:CDS 55.0%
CTGGTGCAGATAGGACTGGA+GGG - chr8.3:63003702-63003721 MS.gene001756:CDS 55.0%
GCGCTGTTGAACGACGTGAA+TGG - chr8.3:63002383-63002402 MS.gene001756:CDS 55.0%
GCTTGAGAGCTGGTGCAGAT+AGG - chr8.3:63003693-63003712 MS.gene001756:CDS 55.0%
GTACCTCCTAGCTTGAGAGC+TGG - chr8.3:63003683-63003702 MS.gene001756:CDS 55.0%
GTGGGAAGAAGGGTGACCAT+TGG - chr8.3:63003564-63003583 MS.gene001756:intron 55.0%
TCTGCACCAGCTCTCAAGCT+AGG + chr8.3:63003692-63003711 None:intergenic 55.0%
TTACCTGACGCGGTGGTAAC+AGG + chr8.3:63002240-63002259 None:intergenic 55.0%
TTTCCTGTTACCACCGCGTC+AGG - chr8.3:63002234-63002253 MS.gene001756:CDS 55.0%
! CCTCCGAGAGATTGGTTACC+CGG + chr8.3:63003763-63003782 None:intergenic 55.0%
! GTGGGTTGCCAGAATCACAG+TGG - chr8.3:63002969-63002988 MS.gene001756:intron 55.0%
!! TCTCCCCAACGTAGCCTTGT+CGG + chr8.3:63002181-63002200 None:intergenic 55.0%
ACTGGCACGAGTAGGGGGTT+TGG - chr8.3:63003863-63003882 MS.gene001756:CDS 60.0%
AGAACAGCATCTGGGTCCCC+AGG + chr8.3:63003527-63003546 None:intergenic 60.0%
CCAATCTCTCGGAGGACACG+AGG - chr8.3:63003768-63003787 MS.gene001756:CDS 60.0%
CCGGGTAACCAATCTCTCGG+AGG - chr8.3:63003760-63003779 MS.gene001756:CDS 60.0%
CCTCGTGTCCTCCGAGAGAT+TGG + chr8.3:63003771-63003790 None:intergenic 60.0%
GCACCAGCTCTCAAGCTAGG+AGG + chr8.3:63003689-63003708 None:intergenic 60.0%
GCTGGTGCAGATAGGACTGG+AGG - chr8.3:63003701-63003720 MS.gene001756:CDS 60.0%
GGACTGGAGGGTCAGACATG+AGG - chr8.3:63003714-63003733 MS.gene001756:CDS 60.0%
GGGTGGCCCATTCAACCTTC+AGG + chr8.3:63003967-63003986 None:intergenic 60.0%
GGTCCAATTACCTGACGCGG+TGG + chr8.3:63002247-63002266 None:intergenic 60.0%
! GGTCCCCAGGCTTTTGCTCA+GGG + chr8.3:63003514-63003533 None:intergenic 60.0%
!! CCCAACGTAGCCTTGTCGGT+TGG + chr8.3:63002177-63002196 None:intergenic 60.0%
GAGGGTCAGACATGAGGCGC+AGG - chr8.3:63003720-63003739 MS.gene001756:CDS 65.0%
! GGGTCCCCAGGCTTTTGCTC+AGG + chr8.3:63003515-63003534 None:intergenic 65.0%
!! GTTGAAGCGGGTGCTGCTGC+TGG + chr8.3:63003650-63003669 None:intergenic 65.0%
!! GAAGCGGGTGCTGCTGCTGG+AGG + chr8.3:63003647-63003666 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr8.3 gene 63002157 63004000 63002157 ID=MS.gene001756
chr8.3 mRNA 63002157 63004000 63002157 ID=MS.gene001756.t1;Parent=MS.gene001756
chr8.3 exon 63003658 63004000 63003658 ID=MS.gene001756.t1.exon1;Parent=MS.gene001756.t1
chr8.3 CDS 63003658 63004000 63003658 ID=cds.MS.gene001756.t1;Parent=MS.gene001756.t1
chr8.3 exon 63002157 63002656 63002157 ID=MS.gene001756.t1.exon2;Parent=MS.gene001756.t1
chr8.3 CDS 63002157 63002656 63002157 ID=cds.MS.gene001756.t1;Parent=MS.gene001756.t1
Gene Sequence

>MS.gene001756

ATGGCGACTCTGATGAACCAACCGACAAGGCTACGTTGGGGAGAATTGGAAGAAGACGACGACGGCAACGATCTCGATTTCCTGTTACCACCGCGTCAGGTAATTGGACCTGACGAAAACGGAATCAAGAAAGTGATTGAATACAAATTTGATGAAGATGATAATAAGGTTAAGATCACAACAGTTACTCGCACAAGGAAACTGGCTAGCGCGCGTGTTAGTAAACGCGCTGTTGAACGACGTGAATGGTCGAAATTTGGTGATGCTGTGAATGAAGATGTTGGTAGTCGGCTTACTGCTGTTTCGACTGAAGAGATTGTTCTTGAACGTCCTAAGCCTATTGGTATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCGTTTTAGTTTTTGGTTTGTTTTACGTTTTTGTTGATTCTGGGTTTTTTTTTTATATATATTTTTGTGATTGTTTTATGATTATATTTTAAACATGTGAATTATTTTTTATAATAATTTAAAAAAACGATATAATTCAATGTAATCATATGTGTTTTTGTGTTTTTATAGCTTAATTACATGCACTGACAGTGTAAAATAGTGTGATTTGGCAGAATGAGAAATCATCAATGTTATATTCATCCATTAAATTATTGCTCGTGTCTACGTGTTAGTGTCAATATCATGATCGGTTTTTGTGTCCGTTTTATTGCTTCATAGGGTTTTGACAAAAAAAATTATGGTCAAGGGTTTAAGTGCATGTTGGCATCATGGTGGGTTGCCAGAATCACAGTGGCTTGCTACACTACACTTTATAGCATTTGCAAAATCATAGTGGTTCACTGTGATTCTAGCAAACACACTGTGATACCGAACATGCACTAAATCGTTGCTTCTACTATGTTTCATGATTGTATGTACACCTTTTATTGAAACTATGAATTGTTTATTATATTTATTCAGTGTAAGAAACAGTGCTCAATTTCATACACTGGAGTTTTGGACAATGCACTGCGTTTCATTTCTTATATCTCTTTTCTTGATTAAATGAACTAGGGAGTTAATTCTAACGCTCAAGAATGATTGTATTGGTCTACTTTGCATTTCAATTTGTACTTGGGATGAATTACCAGGATTTCTCACTTGTATAGGACACTAATGTGTTTTTGTAAATGAAATTGAGTAAAGTGAATAATATCAATCCTTGAATAACAAATCATGAGTGGTTTAAATATCAACAGTTATTTTCTCTATATCAATATCATGATATCTGATGCTAACTCTATATCTTGCAATTGTTAACAGGTTCCACAATCCCTGAGCAAAAGCCTGGGGACCCAGATGCTGTTCTTATGGTATGCAGGACTTGTGGGAAGAAGGGTGACCATTGGACTGCAAGGTGTCCAAATAGGAATCTCACACAACCGGCTAACGATTTTGTTGATAAGCCTCCAGCAGCAGCACCCGCTTCAACCAACAATGCATATGTACCTCCTAGCTTGAGAGCTGGTGCAGATAGGACTGGAGGGTCAGACATGAGGCGCAGGAATGATGAGAACTCTGTCCGGGTAACCAATCTCTCGGAGGACACGAGGGAGCCTGATTTGCATGAGCTTTTCGGCACTTTTGGTTCTGTGAGCAGAGTATATGTTGCTATGGATAAAAACACTGGCACGAGTAGGGGGTTTGGCTTTGTCAACTTTGTCAACAGGGATGATGCTCAGAGAGCTATTAACAAACTGAATGGCTATGGCTACGACAATCTCATCCTGAAGGTTGAATGGGCCACCCCAAGAACAACCTAA
Protein sequence

>MS.gene001756.t1

MATLMNQPTRLRWGELEEDDDGNDLDFLLPPRQVIGPDENGIKKVIEYKFDEDDNKVKITTVTRTRKLASARVSKRAVERREWSKFGDAVNEDVGSRLTAVSTEEIVLERPKPIGSTIPEQKPGDPDAVLMVCRTCGKKGDHWTARCPNRNLTQPANDFVDKPPAAAPASTNNAYVPPSLRAGADRTGGSDMRRRNDENSVRVTNLSEDTREPDLHELFGTFGSVSRVYVAMDKNTGTSRGFGFVNFVNRDDAQRAINKLNGYGYDNLILKVEWATPRTT