Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene024658.t1 | XP_024638960.1 | 94.9 | 800 | 26 | 2 | 1 | 785 | 1 | 800 | 0.00E+00 | 1456.8 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene024658.t1 | Q9FFR9 | 65.6 | 793 | 247 | 8 | 1 | 770 | 1 | 790 | 6.6e-286 | 984.6 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene024658.t1 | G7KAQ3 | 94.9 | 800 | 26 | 2 | 1 | 785 | 1 | 800 | 0.0e+00 | 1456.8 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene018570 | MS.gene024658 | PPI |
MS.gene030201 | MS.gene024658 | PPI |
MS.gene26746 | MS.gene024658 | PPI |
MS.gene031733 | MS.gene024658 | PPI |
MS.gene061889 | MS.gene024658 | PPI |
MS.gene09863 | MS.gene024658 | PPI |
MS.gene024658 | MS.gene006576 | PPI |
MS.gene024658 | MS.gene065903 | PPI |
MS.gene065366 | MS.gene024658 | PPI |
MS.gene024658 | MS.gene09864 | PPI |
MS.gene018569 | MS.gene024658 | PPI |
MS.gene024658 | MS.gene68584 | PPI |
MS.gene030202 | MS.gene024658 | PPI |
MS.gene061890 | MS.gene024658 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene024658.t1 | MTR_5g009770 | 94.875 | 800 | 26 | 2 | 1 | 785 | 1 | 800 | 0.0 | 1533 |
MS.gene024658.t1 | MTR_5g009780 | 86.875 | 800 | 90 | 2 | 1 | 785 | 1 | 800 | 0.0 | 1402 |
MS.gene024658.t1 | MTR_5g009800 | 84.091 | 792 | 94 | 2 | 1 | 779 | 1 | 773 | 0.0 | 1329 |
MS.gene024658.t1 | MTR_5g009770 | 94.469 | 669 | 22 | 2 | 132 | 785 | 1 | 669 | 0.0 | 1276 |
MS.gene024658.t1 | MTR_4g078120 | 59.703 | 809 | 295 | 7 | 6 | 785 | 3 | 809 | 0.0 | 921 |
MS.gene024658.t1 | MTR_4g123583 | 58.809 | 789 | 294 | 6 | 11 | 771 | 8 | 793 | 0.0 | 899 |
MS.gene024658.t1 | MTR_8g093780 | 46.028 | 793 | 390 | 13 | 4 | 764 | 5 | 791 | 0.0 | 691 |
MS.gene024658.t1 | MTR_3g096380 | 45.006 | 811 | 401 | 12 | 11 | 785 | 14 | 815 | 0.0 | 673 |
MS.gene024658.t1 | MTR_2g011520 | 44.246 | 782 | 406 | 11 | 17 | 778 | 2 | 773 | 0.0 | 649 |
MS.gene024658.t1 | MTR_7g099800 | 49.075 | 811 | 349 | 16 | 15 | 764 | 8 | 815 | 0.0 | 646 |
MS.gene024658.t1 | MTR_7g099750 | 47.016 | 821 | 344 | 18 | 15 | 764 | 8 | 808 | 0.0 | 617 |
MS.gene024658.t1 | MTR_7g099820 | 45.696 | 790 | 380 | 13 | 16 | 765 | 5 | 785 | 0.0 | 613 |
MS.gene024658.t1 | MTR_7g099820 | 47.262 | 694 | 328 | 10 | 16 | 678 | 5 | 691 | 0.0 | 582 |
MS.gene024658.t1 | MTR_3g031170 | 33.758 | 785 | 472 | 13 | 2 | 763 | 19 | 778 | 1.72e-130 | 408 |
MS.gene024658.t1 | MTR_2g040100 | 32.590 | 807 | 490 | 20 | 22 | 784 | 35 | 831 | 1.94e-126 | 398 |
MS.gene024658.t1 | MTR_3g071990 | 31.017 | 777 | 491 | 14 | 10 | 763 | 11 | 765 | 1.01e-117 | 375 |
MS.gene024658.t1 | MTR_1g043400 | 31.944 | 792 | 485 | 22 | 17 | 767 | 10 | 788 | 1.68e-116 | 371 |
MS.gene024658.t1 | MTR_1g045870 | 32.066 | 789 | 473 | 22 | 17 | 767 | 10 | 773 | 1.00e-114 | 366 |
MS.gene024658.t1 | MTR_5g074380 | 31.491 | 778 | 473 | 18 | 19 | 763 | 76 | 826 | 4.36e-112 | 361 |
MS.gene024658.t1 | MTR_5g074340 | 30.256 | 780 | 486 | 17 | 17 | 763 | 29 | 783 | 8.62e-112 | 359 |
MS.gene024658.t1 | MTR_5g067690 | 30.250 | 800 | 499 | 18 | 12 | 767 | 11 | 795 | 5.10e-108 | 349 |
MS.gene024658.t1 | MTR_5g074360 | 30.102 | 784 | 489 | 16 | 19 | 766 | 31 | 791 | 9.23e-108 | 348 |
MS.gene024658.t1 | MTR_3g037270 | 29.800 | 802 | 491 | 23 | 10 | 767 | 19 | 792 | 2.28e-106 | 345 |
MS.gene024658.t1 | MTR_0002s1180 | 30.038 | 789 | 498 | 18 | 18 | 767 | 16 | 789 | 3.77e-104 | 338 |
MS.gene024658.t1 | MTR_5g074320 | 31.302 | 722 | 450 | 15 | 68 | 763 | 10 | 711 | 1.38e-103 | 335 |
MS.gene024658.t1 | MTR_3g071990 | 31.000 | 700 | 438 | 14 | 87 | 763 | 6 | 683 | 3.48e-103 | 334 |
MS.gene024658.t1 | MTR_3g071870 | 29.262 | 786 | 495 | 18 | 19 | 762 | 33 | 799 | 1.24e-100 | 330 |
MS.gene024658.t1 | MTR_3g071880 | 29.494 | 790 | 488 | 20 | 21 | 762 | 22 | 790 | 9.03e-100 | 327 |
MS.gene024658.t1 | MTR_3g031160 | 28.352 | 783 | 510 | 17 | 11 | 766 | 24 | 782 | 1.82e-99 | 326 |
MS.gene024658.t1 | MTR_4g037755 | 30.971 | 762 | 460 | 23 | 49 | 767 | 35 | 773 | 9.43e-98 | 321 |
MS.gene024658.t1 | MTR_3g037260 | 28.444 | 784 | 510 | 17 | 22 | 767 | 20 | 790 | 2.33e-97 | 321 |
MS.gene024658.t1 | MTR_6g015940 | 30.151 | 796 | 491 | 20 | 4 | 763 | 19 | 785 | 5.90e-94 | 311 |
MS.gene024658.t1 | MTR_8g085260 | 28.411 | 799 | 509 | 16 | 1 | 763 | 18 | 789 | 7.47e-91 | 303 |
MS.gene024658.t1 | MTR_5g088470 | 28.075 | 805 | 501 | 25 | 4 | 763 | 17 | 788 | 9.80e-87 | 291 |
MS.gene024658.t1 | MTR_5g088450 | 28.338 | 794 | 506 | 21 | 9 | 763 | 22 | 791 | 5.72e-86 | 290 |
MS.gene024658.t1 | MTR_3g498715 | 27.757 | 789 | 489 | 18 | 14 | 759 | 38 | 788 | 2.30e-85 | 288 |
MS.gene024658.t1 | MTR_4g029520 | 27.591 | 772 | 500 | 20 | 38 | 766 | 25 | 780 | 4.24e-84 | 284 |
MS.gene024658.t1 | MTR_3g031030 | 28.760 | 758 | 473 | 19 | 49 | 765 | 35 | 766 | 5.00e-84 | 284 |
MS.gene024658.t1 | MTR_6g053320 | 28.022 | 728 | 462 | 17 | 81 | 770 | 69 | 772 | 2.00e-83 | 282 |
MS.gene024658.t1 | MTR_3g083850 | 27.363 | 804 | 504 | 22 | 4 | 763 | 17 | 784 | 4.90e-82 | 279 |
MS.gene024658.t1 | MTR_5g088430 | 28.105 | 797 | 497 | 22 | 10 | 763 | 25 | 788 | 8.51e-82 | 278 |
MS.gene024658.t1 | MTR_5g088790 | 27.975 | 790 | 509 | 15 | 14 | 763 | 45 | 814 | 8.55e-82 | 279 |
MS.gene024658.t1 | MTR_3g110700 | 26.623 | 770 | 510 | 16 | 38 | 766 | 22 | 777 | 1.12e-81 | 278 |
MS.gene024658.t1 | MTR_5g088840 | 27.468 | 790 | 514 | 15 | 14 | 763 | 45 | 815 | 2.80e-81 | 277 |
MS.gene024658.t1 | MTR_7g085870 | 28.020 | 803 | 491 | 23 | 16 | 763 | 24 | 794 | 1.18e-80 | 276 |
MS.gene024658.t1 | MTR_7g053000 | 27.560 | 791 | 511 | 16 | 14 | 763 | 45 | 814 | 1.55e-79 | 273 |
MS.gene024658.t1 | MTR_7g052970 | 27.560 | 791 | 511 | 16 | 14 | 763 | 45 | 814 | 1.28e-78 | 270 |
MS.gene024658.t1 | MTR_7g052680 | 27.673 | 795 | 505 | 19 | 14 | 763 | 45 | 814 | 5.89e-78 | 268 |
MS.gene024658.t1 | MTR_3g465680 | 29.529 | 403 | 252 | 10 | 7 | 389 | 38 | 428 | 8.40e-45 | 174 |
MS.gene024658.t1 | MTR_3g465680 | 29.457 | 387 | 236 | 13 | 388 | 763 | 555 | 915 | 3.44e-37 | 150 |
MS.gene024658.t1 | MTR_7g052895 | 23.519 | 540 | 375 | 10 | 14 | 521 | 45 | 578 | 6.07e-40 | 158 |
MS.gene024658.t1 | MTR_5g083560 | 33.022 | 321 | 179 | 10 | 456 | 763 | 1 | 298 | 1.08e-37 | 144 |
MS.gene024658.t1 | MTR_1g082340 | 60.825 | 97 | 38 | 0 | 442 | 538 | 82 | 178 | 9.09e-35 | 132 |
MS.gene024658.t1 | MTR_5g061460 | 59.794 | 97 | 39 | 0 | 442 | 538 | 15 | 111 | 5.23e-34 | 128 |
MS.gene024658.t1 | MTR_1g023830 | 58.333 | 48 | 20 | 0 | 490 | 537 | 1 | 48 | 1.69e-13 | 67.0 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene024658.t1 | AT5G41610 | 65.997 | 797 | 245 | 8 | 1 | 773 | 1 | 795 | 0.0 | 1023 |
MS.gene024658.t1 | AT5G41610 | 65.997 | 797 | 245 | 8 | 1 | 773 | 1 | 795 | 0.0 | 1023 |
MS.gene024658.t1 | AT4G23700 | 60.124 | 805 | 287 | 8 | 6 | 776 | 3 | 807 | 0.0 | 942 |
MS.gene024658.t1 | AT4G23700 | 60.124 | 805 | 287 | 8 | 6 | 776 | 3 | 807 | 0.0 | 942 |
MS.gene024658.t1 | AT5G41610 | 66.113 | 723 | 221 | 7 | 71 | 770 | 1 | 722 | 0.0 | 919 |
MS.gene024658.t1 | AT3G17630 | 59.446 | 794 | 302 | 6 | 1 | 781 | 1 | 787 | 0.0 | 901 |
MS.gene024658.t1 | AT3G17630 | 59.446 | 794 | 302 | 6 | 1 | 781 | 1 | 787 | 0.0 | 901 |
MS.gene024658.t1 | AT1G64170 | 55.428 | 783 | 305 | 13 | 15 | 764 | 21 | 792 | 0.0 | 795 |
MS.gene024658.t1 | AT2G13620 | 47.219 | 809 | 391 | 13 | 4 | 782 | 8 | 810 | 0.0 | 689 |
MS.gene024658.t1 | AT3G53720 | 49.632 | 816 | 341 | 16 | 15 | 766 | 8 | 817 | 0.0 | 658 |
MS.gene024658.t1 | AT3G53720 | 48.064 | 749 | 319 | 16 | 82 | 766 | 2 | 744 | 0.0 | 563 |
MS.gene024658.t1 | AT1G05580 | 34.207 | 763 | 459 | 10 | 32 | 764 | 50 | 799 | 5.86e-127 | 400 |
MS.gene024658.t1 | AT2G31910 | 33.290 | 766 | 480 | 10 | 24 | 764 | 28 | 787 | 9.50e-119 | 378 |
MS.gene024658.t1 | AT1G05580 | 34.143 | 700 | 418 | 10 | 95 | 764 | 2 | 688 | 3.21e-114 | 364 |
MS.gene024658.t1 | AT1G06970 | 31.469 | 769 | 485 | 16 | 18 | 763 | 35 | 784 | 1.43e-107 | 348 |
MS.gene024658.t1 | AT2G31910 | 33.237 | 695 | 433 | 10 | 95 | 764 | 2 | 690 | 3.65e-104 | 337 |
MS.gene024658.t1 | AT2G31910 | 33.237 | 695 | 433 | 10 | 95 | 764 | 2 | 690 | 3.65e-104 | 337 |
MS.gene024658.t1 | AT2G30240 | 28.892 | 803 | 522 | 16 | 11 | 785 | 30 | 811 | 1.45e-96 | 319 |
MS.gene024658.t1 | AT5G58460 | 27.342 | 790 | 512 | 16 | 21 | 763 | 53 | 827 | 4.43e-83 | 283 |
MS.gene024658.t1 | AT5G37060 | 26.894 | 792 | 515 | 16 | 21 | 763 | 53 | 829 | 9.77e-82 | 280 |
MS.gene024658.t1 | AT5G22900 | 27.094 | 812 | 509 | 21 | 14 | 763 | 27 | 817 | 9.31e-79 | 271 |
MS.gene024658.t1 | AT5G01690 | 27.065 | 787 | 504 | 21 | 11 | 763 | 17 | 767 | 4.25e-78 | 268 |
MS.gene024658.t1 | AT3G52080 | 28.173 | 788 | 479 | 22 | 35 | 763 | 25 | 784 | 3.70e-74 | 258 |
MS.gene024658.t1 | AT3G44900 | 27.638 | 796 | 490 | 21 | 30 | 768 | 51 | 817 | 2.07e-73 | 256 |
MS.gene024658.t1 | AT2G28180 | 27.895 | 803 | 495 | 20 | 14 | 763 | 37 | 808 | 2.01e-72 | 253 |
MS.gene024658.t1 | AT1G08150 | 28.661 | 799 | 491 | 27 | 9 | 757 | 33 | 802 | 4.32e-71 | 249 |
MS.gene024658.t1 | AT1G08140 | 26.808 | 802 | 514 | 23 | 10 | 763 | 27 | 803 | 5.39e-69 | 243 |
MS.gene024658.t1 | AT1G79400 | 27.513 | 796 | 512 | 21 | 24 | 782 | 11 | 778 | 9.64e-69 | 242 |
MS.gene024658.t1 | AT5G01680 | 26.125 | 800 | 525 | 19 | 1 | 763 | 5 | 775 | 6.46e-67 | 237 |
MS.gene024658.t1 | AT2G28170 | 27.017 | 781 | 505 | 22 | 19 | 763 | 47 | 798 | 6.85e-67 | 237 |
MS.gene024658.t1 | AT1G16380 | 25.158 | 791 | 493 | 23 | 38 | 766 | 24 | 777 | 1.52e-61 | 222 |
MS.gene024658.t1 | AT3G44910 | 25.033 | 763 | 487 | 16 | 31 | 751 | 35 | 754 | 1.21e-60 | 219 |
MS.gene024658.t1 | AT5G22910 | 26.357 | 774 | 480 | 18 | 31 | 751 | 47 | 783 | 1.73e-60 | 219 |
MS.gene024658.t1 | AT3G44930 | 25.165 | 759 | 503 | 17 | 31 | 751 | 35 | 766 | 3.57e-59 | 215 |
MS.gene024658.t1 | AT3G44920 | 24.781 | 799 | 540 | 18 | 1 | 761 | 1 | 776 | 2.78e-54 | 201 |
MS.gene024658.t1 | AT1G08135 | 25.159 | 787 | 513 | 24 | 15 | 763 | 46 | 794 | 6.24e-48 | 182 |
Find 194 sgRNAs with CRISPR-Local
Find 278 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TGTGAATGTTCCTCTATTTC+TGG | 0.026331 | 5.1:-3310564 | None:intergenic |
CCTATCTTCTAAAACCTTTA+AGG | 0.099756 | 5.1:+3307538 | MS.gene024658:CDS |
ATAACTCGTGGTTGCCTTAA+AGG | 0.144813 | 5.1:-3307552 | None:intergenic |
CACATCTAATGGTGTATTTC+AGG | 0.174173 | 5.1:+3307437 | MS.gene024658:CDS |
TTCCGCATTTCTCGTATATA+TGG | 0.176867 | 5.1:+3308579 | MS.gene024658:CDS |
TTAGTGGAGTCTACTATCTT+AGG | 0.193300 | 5.1:+3310189 | MS.gene024658:CDS |
ATTTCTGGGCCAAAATTTAT+TGG | 0.194184 | 5.1:-3310549 | None:intergenic |
TGTTTCACTCTGGGTCTTCT+TGG | 0.198733 | 5.1:+3308777 | MS.gene024658:CDS |
GTCACATTTACTGCTTGTTT+TGG | 0.200333 | 5.1:+3309148 | MS.gene024658:CDS |
CACAAACTTGACTTAGTTTC+TGG | 0.208355 | 5.1:-3309804 | None:intergenic |
TGACGAGACCTTTGCCATTA+TGG | 0.210814 | 5.1:+3309417 | MS.gene024658:CDS |
ACCTCTCGGAAAATTCTTTC+AGG | 0.211875 | 5.1:-3309675 | None:intergenic |
GCTCTGGCTGTTGCCTTATC+AGG | 0.214002 | 5.1:+3308736 | MS.gene024658:CDS |
TCCTGTATTAGCTCGTATTT+TGG | 0.214796 | 5.1:+3308627 | MS.gene024658:CDS |
TGCGGAAGTATTTACATCTT+TGG | 0.224960 | 5.1:-3308563 | None:intergenic |
AATGGGGTGCCAATAAATTT+TGG | 0.231005 | 5.1:+3310540 | MS.gene024658:CDS |
CCGGAAAATGGTCCATCTTT+TGG | 0.238223 | 5.1:-3308998 | None:intergenic |
CCATTCAGGGGCTGCAATCT+TGG | 0.250984 | 5.1:+3309110 | MS.gene024658:CDS |
CGCTGACCTTTATTCCAAAA+TGG | 0.258844 | 5.1:-3309742 | None:intergenic |
ATCTGTTTCTTGTGGGTCTA+AGG | 0.262263 | 5.1:+3310391 | MS.gene024658:CDS |
CTAGCTTCTGTTCTGGCTGC+TGG | 0.264900 | 5.1:+3308913 | MS.gene024658:CDS |
CATTCAGGGGCTGCAATCTT+GGG | 0.270266 | 5.1:+3309111 | MS.gene024658:CDS |
TCACTCTGGGTCTTCTTGGC+TGG | 0.277721 | 5.1:+3308781 | MS.gene024658:CDS |
AGGCTGTTGTGGGGCAATCT+TGG | 0.285887 | 5.1:-3310491 | None:intergenic |
TGGGCCATCCATTTGAAAAT+TGG | 0.287723 | 5.1:-3308841 | None:intergenic |
CACTCTGGGTCTTCTTGGCT+GGG | 0.289867 | 5.1:+3308782 | MS.gene024658:CDS |
CCTAAATCTCTGCGGAAAAC+TGG | 0.310196 | 5.1:+3308451 | MS.gene024658:CDS |
CCCCACAACAGCCTCAGTTT+TGG | 0.313712 | 5.1:+3310500 | MS.gene024658:CDS |
GACTGTGAAGCTCTTGCTTA+TGG | 0.317170 | 5.1:+3310117 | MS.gene024658:CDS |
GTCTCCTCTTGTTTCACTCT+GGG | 0.321265 | 5.1:+3308768 | MS.gene024658:CDS |
GACCAACATAGCTACCATTC+AGG | 0.327011 | 5.1:+3309096 | MS.gene024658:CDS |
GGCTGTTGTGGGGCAATCTT+GGG | 0.336446 | 5.1:-3310490 | None:intergenic |
TTACCCTTTGCACTAGGAAT+TGG | 0.338535 | 5.1:+3308511 | MS.gene024658:CDS |
AATCTTTGTTGCTTATGAAA+TGG | 0.339065 | 5.1:-3309919 | None:intergenic |
ATCTTTGTTGCTTATGAAAT+GGG | 0.347722 | 5.1:-3309918 | None:intergenic |
TAGTGGAGTCTACTATCTTA+GGG | 0.348765 | 5.1:+3310190 | MS.gene024658:CDS |
TCCTGCAATCTGTTTCTTGT+GGG | 0.356297 | 5.1:+3310384 | MS.gene024658:CDS |
TTTAATGAGTCTTTAGTGCT+TGG | 0.361083 | 5.1:+3309217 | MS.gene024658:CDS |
CATCGACCGGCTCACCTTCA+TGG | 0.361582 | 5.1:-3308870 | None:intergenic |
GCTCACCTTCATGGCATTGT+TGG | 0.366554 | 5.1:-3308861 | None:intergenic |
AGGATTCTTGCCTGCTTCCA+TGG | 0.369527 | 5.1:+3309565 | MS.gene024658:CDS |
GTGAATGTTCCTCTATTTCT+GGG | 0.373195 | 5.1:-3310563 | None:intergenic |
CGGTGAATTGGCCTGTGCTC+TGG | 0.377041 | 5.1:+3310419 | MS.gene024658:CDS |
CTCACCTTCATGGCATTGTT+GGG | 0.377633 | 5.1:-3308860 | None:intergenic |
TGCTACACTAGCTTCTGTTC+TGG | 0.378384 | 5.1:+3308906 | MS.gene024658:CDS |
CCACCAACAGGTCCTAGTTC+CGG | 0.379805 | 5.1:-3310456 | None:intergenic |
TCCACAAGAGCACCGGAAAA+TGG | 0.381554 | 5.1:-3309010 | None:intergenic |
CCATTAGATGTGGACTTCAT+TGG | 0.383582 | 5.1:-3307426 | None:intergenic |
CTACTTGGGCCATCAGCATT+TGG | 0.384880 | 5.1:+3308313 | MS.gene024658:CDS |
TCTAAGGCCAACCGGTGAAT+TGG | 0.387525 | 5.1:+3310407 | MS.gene024658:CDS |
AGTCTCCTCTTGTTTCACTC+TGG | 0.393763 | 5.1:+3308767 | MS.gene024658:CDS |
CCAATGAAGTCCACATCTAA+TGG | 0.402085 | 5.1:+3307426 | MS.gene024658:CDS |
CACCAACAGGTCCTAGTTCC+GGG | 0.402709 | 5.1:-3310455 | None:intergenic |
ATCTAATACTGGAAGACTCT+TGG | 0.407831 | 5.1:-3308371 | None:intergenic |
CTTTGCCATTATGGTTCTCA+TGG | 0.418044 | 5.1:+3309426 | MS.gene024658:CDS |
CCATGTTATCGTGGCATTTG+AGG | 0.418794 | 5.1:+3309777 | MS.gene024658:CDS |
TAGCTTCTGTTCTGGCTGCT+GGG | 0.419739 | 5.1:+3308914 | MS.gene024658:CDS |
TGGGTCTTCTTGGCTGGGTG+TGG | 0.426319 | 5.1:+3308787 | MS.gene024658:CDS |
TCCGCATTTCTCGTATATAT+GGG | 0.426340 | 5.1:+3308580 | MS.gene024658:CDS |
TTCCTGCAATCTGTTTCTTG+TGG | 0.429638 | 5.1:+3310383 | MS.gene024658:CDS |
TTTGCTAGAGTATCTAATAC+TGG | 0.434840 | 5.1:-3308382 | None:intergenic |
CACCAAAACTGAGGCTGTTG+TGG | 0.445584 | 5.1:-3310502 | None:intergenic |
TCTAATACTGGAAGACTCTT+GGG | 0.445615 | 5.1:-3308370 | None:intergenic |
CTCGCTTCTTTCCAGAGCAC+AGG | 0.449554 | 5.1:-3310430 | None:intergenic |
AGCCTGGATCCTTCTTGCTC+TGG | 0.452160 | 5.1:+3308720 | MS.gene024658:CDS |
CTTGATGAATAGTAAAGGCT+TGG | 0.460634 | 5.1:+3309243 | MS.gene024658:CDS |
AGCAGGCAAGAATCCTCAAC+TGG | 0.461387 | 5.1:-3309558 | None:intergenic |
AGACTGGCTATTGCCTGATA+AGG | 0.462035 | 5.1:-3308749 | None:intergenic |
CCCCTGAATGGTAGCTATGT+TGG | 0.463640 | 5.1:-3309098 | None:intergenic |
TCTTGATTATGCACTTCCCT+TGG | 0.466853 | 5.1:+3307470 | MS.gene024658:CDS |
TCTTGCAGTCACAAGGGGAC+TGG | 0.473223 | 5.1:+3307515 | MS.gene024658:CDS |
ACCCACAAGAAACAGATTGC+AGG | 0.478736 | 5.1:-3310385 | None:intergenic |
TTCATGAATGTTAGTCATTG+AGG | 0.479059 | 5.1:-3309848 | None:intergenic |
GCCAAAATACGAGCTAATAC+AGG | 0.479170 | 5.1:-3308628 | None:intergenic |
ACCAAAACTGAGGCTGTTGT+GGG | 0.485006 | 5.1:-3310501 | None:intergenic |
TTTGTTGATCGCGGACTTGG+TGG | 0.486407 | 5.1:+3310027 | MS.gene024658:CDS |
AAAATAGAGGATCTTGTGTC+TGG | 0.487583 | 5.1:+3309034 | MS.gene024658:CDS |
AGGACCTGTTGGTGGCTTGT+TGG | 0.487601 | 5.1:+3310464 | MS.gene024658:CDS |
GCCTTGTTCTTGCAGTCACA+AGG | 0.491309 | 5.1:+3307508 | MS.gene024658:CDS |
CCAAGATTGCAGCCCCTGAA+TGG | 0.496927 | 5.1:-3309110 | None:intergenic |
TGACAGGGAGGAATACTACT+TGG | 0.497932 | 5.1:+3308298 | MS.gene024658:intron |
GCGGATAGTAGCAACTGTTT+CGG | 0.498540 | 5.1:-3310352 | None:intergenic |
GAGAGCCATGAGAACCATAA+TGG | 0.499751 | 5.1:-3309431 | None:intergenic |
CCACTTGACACAAAATAAAG+TGG | 0.501014 | 5.1:-3309067 | None:intergenic |
CAGAGCACAGGCCAATTCAC+CGG | 0.503276 | 5.1:-3310418 | None:intergenic |
CATAAGCAACAAAGATTAGA+CGG | 0.503654 | 5.1:+3309925 | MS.gene024658:CDS |
TTATTCCGTCCAAATGCTGA+TGG | 0.503922 | 5.1:-3308322 | None:intergenic |
ATGACTTCGAATACTACAGC+TGG | 0.505481 | 5.1:+3307387 | MS.gene024658:CDS |
AGCCAGAGCAAGAAGGATCC+AGG | 0.506866 | 5.1:-3308722 | None:intergenic |
GATACCAACAAGCCACCAAC+AGG | 0.508371 | 5.1:-3310468 | None:intergenic |
CTTGTGGGTCTAAGGCCAAC+CGG | 0.508522 | 5.1:+3310399 | MS.gene024658:CDS |
GCTCGTATGGCCGAGCACCC+TGG | 0.509209 | 5.1:+3310141 | MS.gene024658:CDS |
GAGGTCCTCATCAATACTAA+TGG | 0.511434 | 5.1:+3309693 | MS.gene024658:CDS |
CATGACCACTCCTCTTGTGA+TGG | 0.513677 | 5.1:+3309465 | MS.gene024658:CDS |
ACATCTAATGGTGTATTTCA+GGG | 0.514947 | 5.1:+3307438 | MS.gene024658:CDS |
AGAAGCGAGTGCCCGGAACT+AGG | 0.517785 | 5.1:+3310444 | MS.gene024658:CDS |
TTAACCACTAATCTTATGCC+AGG | 0.520099 | 5.1:-3310159 | None:intergenic |
ATTCCTTGCACCATGGAAGC+AGG | 0.522699 | 5.1:-3309575 | None:intergenic |
TAATCTTATGCCAGGGTGCT+CGG | 0.524360 | 5.1:-3310151 | None:intergenic |
GCACCCTGGCATAAGATTAG+TGG | 0.525604 | 5.1:+3310155 | MS.gene024658:CDS |
TCTTGCTTATGGAGCTCGTA+TGG | 0.526592 | 5.1:+3310128 | MS.gene024658:CDS |
TCTGGAAAGAAGCGAGTGCC+CGG | 0.527396 | 5.1:+3310437 | MS.gene024658:CDS |
ATTGAGGAGATTGCTACCAT+TGG | 0.529048 | 5.1:-3309832 | None:intergenic |
GATGTGGACTTCATTGGTGG+CGG | 0.532120 | 5.1:-3307420 | None:intergenic |
ATGTGGACTTCATTGGTGGC+GGG | 0.533788 | 5.1:-3307419 | None:intergenic |
GTAGATAACGGAGTCATCAC+TGG | 0.534704 | 5.1:-3310304 | None:intergenic |
GAACCAATTCCTAGTGCAAA+GGG | 0.535243 | 5.1:-3308514 | None:intergenic |
ATAAGCTTACCCTTTGCACT+AGG | 0.536559 | 5.1:+3308505 | MS.gene024658:CDS |
GGATTCTTGATGAATAGTAA+AGG | 0.540380 | 5.1:+3309238 | MS.gene024658:CDS |
ACCAACATAGCTACCATTCA+GGG | 0.542167 | 5.1:+3309097 | MS.gene024658:CDS |
CCTCAAATGCCACGATAACA+TGG | 0.547459 | 5.1:-3309777 | None:intergenic |
TGATGCAACAGTATCACAAT+GGG | 0.550837 | 5.1:+3310523 | MS.gene024658:CDS |
AACCACCAGTGTCGGACGAA+TGG | 0.551719 | 5.1:+3308666 | MS.gene024658:CDS |
TTCGATCGTTACCGATGTTG+AGG | 0.554484 | 5.1:-3309279 | None:intergenic |
TTAGATGTGGACTTCATTGG+TGG | 0.555123 | 5.1:-3307423 | None:intergenic |
TCGAGTCCTTGCAATTGCTA+TGG | 0.555145 | 5.1:+3308477 | MS.gene024658:CDS |
TGCTCTTGTGGAGAAAATAG+AGG | 0.555546 | 5.1:+3309021 | MS.gene024658:CDS |
TAAATCAATCTCAGAGGATG+AGG | 0.557056 | 5.1:+3310251 | MS.gene024658:CDS |
TTGCCTGCTTCCATGGTGCA+AGG | 0.557230 | 5.1:+3309572 | MS.gene024658:CDS |
GAGCATGCACCATGCTCAGT+TGG | 0.559655 | 5.1:+3310000 | MS.gene024658:CDS |
TAGTATTGATGAGGACCTCT+CGG | 0.560717 | 5.1:-3309689 | None:intergenic |
CACAAGAGGAGTGGTCATGA+AGG | 0.561511 | 5.1:-3309461 | None:intergenic |
GTCCTTGCAATTGCTATGGT+CGG | 0.561733 | 5.1:+3308481 | MS.gene024658:CDS |
ATTCAGGGGCTGCAATCTTG+GGG | 0.562588 | 5.1:+3309112 | MS.gene024658:CDS |
ACAAATACAAAACAGTTGAA+AGG | 0.563836 | 5.1:+3309521 | MS.gene024658:CDS |
CAGTTAATGATGTAGCAGCC+TGG | 0.564394 | 5.1:+3308704 | MS.gene024658:CDS |
TGCGGCTCTCTTTCTTTCAG+CGG | 0.568719 | 5.1:-3309884 | None:intergenic |
ATAGAAAGAATATGAGGCCA+AGG | 0.569815 | 5.1:-3308405 | None:intergenic |
CCCTTGTGACTGCAAGAACA+AGG | 0.570775 | 5.1:-3307509 | None:intergenic |
TCAAGTTTGTGTCCGTCCAA+TGG | 0.570879 | 5.1:+3309816 | MS.gene024658:CDS |
CCGGAACTAGGACCTGTTGG+TGG | 0.571290 | 5.1:+3310456 | MS.gene024658:CDS |
CCATCCATTTGAAAATTGGA+AGG | 0.571739 | 5.1:-3308837 | None:intergenic |
TGAAAATTGGAAGGACAATG+AGG | 0.575141 | 5.1:-3308828 | None:intergenic |
CTGAAATACACCATTAGATG+TGG | 0.575467 | 5.1:-3307436 | None:intergenic |
TTCCGACCATAGCAATTGCA+AGG | 0.578562 | 5.1:-3308483 | None:intergenic |
CTGTACCATTAGTATTGATG+AGG | 0.579134 | 5.1:-3309698 | None:intergenic |
CTTGTTCTTGCAGTCACAAG+GGG | 0.579341 | 5.1:+3307510 | MS.gene024658:CDS |
CCTTGTTCTTGCAGTCACAA+GGG | 0.580215 | 5.1:+3307509 | MS.gene024658:CDS |
GCATATCTGCAAAATAGCCA+AGG | 0.582144 | 5.1:-3307487 | None:intergenic |
ACGAATGGCTATGTCGGCTG+CGG | 0.582174 | 5.1:+3308681 | MS.gene024658:CDS |
TGTCGGACGAATGGCTATGT+CGG | 0.582361 | 5.1:+3308675 | MS.gene024658:CDS |
GCACAGGCCAATTCACCGGT+TGG | 0.584280 | 5.1:-3310414 | None:intergenic |
TGCCCGGAACTAGGACCTGT+TGG | 0.584853 | 5.1:+3310453 | MS.gene024658:CDS |
ACAATGCCATGAAGGTGAGC+CGG | 0.586955 | 5.1:+3308864 | MS.gene024658:CDS |
AAGACCCAGAGTGAAACAAG+AGG | 0.587504 | 5.1:-3308772 | None:intergenic |
TTGTGATGGCTGCGTATAAG+CGG | 0.591008 | 5.1:+3309479 | MS.gene024658:CDS |
GAATTAATTGTCCTCAACAT+CGG | 0.591363 | 5.1:+3309268 | MS.gene024658:CDS |
GTGATGCAACAGTATCACAA+TGG | 0.594247 | 5.1:+3310522 | MS.gene024658:CDS |
CATATGTATAACTCATCGAC+CGG | 0.594550 | 5.1:-3308883 | None:intergenic |
TTAGATACTCTAGCAAACCT+TGG | 0.596516 | 5.1:+3308388 | MS.gene024658:CDS |
TTGGGCCATCAGCATTTGGA+CGG | 0.598018 | 5.1:+3308317 | MS.gene024658:CDS |
CATAGCCATTCGTCCGACAC+TGG | 0.598072 | 5.1:-3308671 | None:intergenic |
GAGATTACCAGCGTTGACGT+TGG | 0.606948 | 5.1:+3310213 | MS.gene024658:CDS |
ATAGAGGAACATTCACATGA+AGG | 0.614384 | 5.1:+3310570 | MS.gene024658:CDS |
CATGAGAACCATAATGGCAA+AGG | 0.616978 | 5.1:-3309425 | None:intergenic |
AAGGGAAGTGCATAATCAAG+AGG | 0.617588 | 5.1:-3307468 | None:intergenic |
CGAACCAATTCCTAGTGCAA+AGG | 0.618466 | 5.1:-3308515 | None:intergenic |
AATACTGGAAGACTCTTGGG+TGG | 0.618474 | 5.1:-3308367 | None:intergenic |
ATGGCCCAACAATGCCATGA+AGG | 0.621341 | 5.1:+3308856 | MS.gene024658:CDS |
CAACATCGGTAACGATCGAA+AGG | 0.623564 | 5.1:+3309282 | MS.gene024658:CDS |
CACTTGACACAAAATAAAGT+GGG | 0.625867 | 5.1:-3309066 | None:intergenic |
CGCAGCCATCACAAGAGGAG+TGG | 0.626789 | 5.1:-3309470 | None:intergenic |
AGGCAACAGCCAGAGCAAGA+AGG | 0.627732 | 5.1:-3308729 | None:intergenic |
AGAATCTCTGCAATAACTCG+TGG | 0.627914 | 5.1:-3307564 | None:intergenic |
AGGAGATTGCTACCATTGGA+CGG | 0.628015 | 5.1:-3309828 | None:intergenic |
TGAGTCTCCAACGTCAACGC+TGG | 0.630640 | 5.1:-3310220 | None:intergenic |
TTATACGCAGCCATCACAAG+AGG | 0.632902 | 5.1:-3309475 | None:intergenic |
GACAGGGAGGAATACTACTT+GGG | 0.634846 | 5.1:+3308299 | MS.gene024658:intron |
TCGATCAAGTTTATCACCGA+CGG | 0.637154 | 5.1:-3309601 | None:intergenic |
GTCGGTGATAAACTTGATCG+AGG | 0.639100 | 5.1:+3309603 | MS.gene024658:CDS |
AAAATGCAGACAGCCAGTTG+AGG | 0.639300 | 5.1:+3309545 | MS.gene024658:CDS |
AAATCTCTGCGGAAAACTGG+AGG | 0.642921 | 5.1:+3308454 | MS.gene024658:CDS |
AACTTGATCGAGGCTTCAAG+AGG | 0.647075 | 5.1:+3309613 | MS.gene024658:CDS |
ATACTGGAAGACTCTTGGGT+GGG | 0.647325 | 5.1:-3308366 | None:intergenic |
CATATCTGCAAAATAGCCAA+GGG | 0.651594 | 5.1:-3307486 | None:intergenic |
TAACCACTAATCTTATGCCA+GGG | 0.652496 | 5.1:-3310158 | None:intergenic |
ACGGAATATTCCTTGCACCA+TGG | 0.661019 | 5.1:-3309582 | None:intergenic |
AAGTAATGTTTCTTACTGTG+TGG | 0.666456 | 5.1:+3310068 | MS.gene024658:CDS |
AGTGGAGTCTACTATCTTAG+GGG | 0.666718 | 5.1:+3310191 | MS.gene024658:CDS |
AGAGTGAAACAAGAGGAGAC+TGG | 0.668111 | 5.1:-3308765 | None:intergenic |
TGGTGCAAGGAATATTCCGT+CGG | 0.673421 | 5.1:+3309585 | MS.gene024658:CDS |
AGGGAAGTGCATAATCAAGA+GGG | 0.673970 | 5.1:-3307467 | None:intergenic |
AGATTCTGACCATGTTATCG+TGG | 0.676472 | 5.1:+3309768 | MS.gene024658:CDS |
CCAAAACTGAGGCTGTTGTG+GGG | 0.680433 | 5.1:-3310500 | None:intergenic |
AGCCATTCGTCCGACACTGG+TGG | 0.686496 | 5.1:-3308668 | None:intergenic |
GACGTTGGAGACTCATCTAG+CGG | 0.691565 | 5.1:+3310228 | MS.gene024658:CDS |
TCCCATATATACGAGAAATG+CGG | 0.695145 | 5.1:-3308581 | None:intergenic |
TAGCGGTAAATCAATCTCAG+AGG | 0.700624 | 5.1:+3310245 | MS.gene024658:CDS |
CTGTTGCATCACCAAAACTG+AGG | 0.719100 | 5.1:-3310511 | None:intergenic |
GATTGCAGGAATTAAACTCG+CGG | 0.722368 | 5.1:-3310371 | None:intergenic |
AGTTGGATCCTAAATCTCTG+CGG | 0.723019 | 5.1:+3308443 | MS.gene024658:CDS |
CCAACATAGCTACCATTCAG+GGG | 0.726005 | 5.1:+3309098 | MS.gene024658:CDS |
AAATGGGAGAATGATGACTG+CGG | 0.775906 | 5.1:-3309902 | None:intergenic |
GATGCAACAGTATCACAATG+GGG | 0.828892 | 5.1:+3310524 | MS.gene024658:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAAAATAACTTCATTATGA+CGG | - | chr5.1:3307627-3307646 | None:intergenic | 15.0% |
!!! | AGTATATGTTTTATTTTAGA+AGG | + | chr5.1:3308210-3308229 | MS.gene024658:intron | 15.0% |
!!! | GCTTATTTAATTTTTCTTTT+TGG | + | chr5.1:3307682-3307701 | MS.gene024658:intron | 15.0% |
!!! | GTATATGTTTTATTTTAGAA+GGG | + | chr5.1:3308211-3308230 | MS.gene024658:intron | 15.0% |
!! | CTAAAAATAGAAAGAATATG+AGG | - | chr5.1:3308414-3308433 | None:intergenic | 20.0% |
!!! | ATATTCTTTCTATTTTTAGC+AGG | + | chr5.1:3308415-3308434 | MS.gene024658:CDS | 20.0% |
!!! | ATTTTTCTTTTTGGTTCTAA+AGG | + | chr5.1:3307691-3307710 | MS.gene024658:intron | 20.0% |
! | AACTAACTAGTTAATGTATG+GGG | + | chr5.1:3307724-3307743 | MS.gene024658:intron | 25.0% |
! | AATCCCTATATAGTATAATC+TGG | + | chr5.1:3309330-3309349 | MS.gene024658:intron | 25.0% |
! | ACAAATACAAAACAGTTGAA+AGG | + | chr5.1:3309521-3309540 | MS.gene024658:CDS | 25.0% |
! | GAACTAACTAGTTAATGTAT+GGG | + | chr5.1:3307723-3307742 | MS.gene024658:intron | 25.0% |
! | GTACAGAAAGTAAGAAAAAA+CGG | + | chr5.1:3309715-3309734 | MS.gene024658:CDS | 25.0% |
! | TACAGAAAGTAAGAAAAAAC+GGG | + | chr5.1:3309716-3309735 | MS.gene024658:CDS | 25.0% |
! | TTGATTCAAGAACATTGAAT+TGG | - | chr5.1:3307984-3308003 | None:intergenic | 25.0% |
!! | AATCTTTGTTGCTTATGAAA+TGG | - | chr5.1:3309922-3309941 | None:intergenic | 25.0% |
!! | ATCTTTGTTGCTTATGAAAT+GGG | - | chr5.1:3309921-3309940 | None:intergenic | 25.0% |
!! | TATTAGACTTGATTTGAGTT+TGG | - | chr5.1:3307923-3307942 | None:intergenic | 25.0% |
!! | TATTTTCTCTTCGTAGATAA+CGG | - | chr5.1:3310319-3310338 | None:intergenic | 25.0% |
!!! | ATGTTTTATTTTAGAAGGGA+GGG | + | chr5.1:3308215-3308234 | MS.gene024658:intron | 25.0% |
!!! | ATTTTCGCTTTGTTAACAAA+AGG | + | chr5.1:3309971-3309990 | MS.gene024658:CDS | 25.0% |
!!! | TATGTTTTATTTTAGAAGGG+AGG | + | chr5.1:3308214-3308233 | MS.gene024658:intron | 25.0% |
!!! | TTTTCGCTTTGTTAACAAAA+GGG | + | chr5.1:3309972-3309991 | MS.gene024658:CDS | 25.0% |
AAGTAATGTTTCTTACTGTG+TGG | + | chr5.1:3310068-3310087 | MS.gene024658:CDS | 30.0% | |
ACATCTAATGGTGTATTTCA+GGG | + | chr5.1:3307438-3307457 | MS.gene024658:CDS | 30.0% | |
ATTGGAATTCATGCTATGTT+TGG | + | chr5.1:3308952-3308971 | MS.gene024658:intron | 30.0% | |
CACTTGACACAAAATAAAGT+GGG | - | chr5.1:3309069-3309088 | None:intergenic | 30.0% | |
CATAAGCAACAAAGATTAGA+CGG | + | chr5.1:3309925-3309944 | MS.gene024658:CDS | 30.0% | |
GAATTAATTGTCCTCAACAT+CGG | + | chr5.1:3309268-3309287 | MS.gene024658:CDS | 30.0% | |
GGAACTAACTAGTTAATGTA+TGG | + | chr5.1:3307722-3307741 | MS.gene024658:intron | 30.0% | |
GGACCAGATTATACTATATA+GGG | - | chr5.1:3309336-3309355 | None:intergenic | 30.0% | |
GGATTCTTGATGAATAGTAA+AGG | + | chr5.1:3309238-3309257 | MS.gene024658:CDS | 30.0% | |
TATGATTGTAATGTGTGTCA+TGG | + | chr5.1:3308263-3308282 | MS.gene024658:intron | 30.0% | |
TATTACATAGAGCTTGAATG+AGG | + | chr5.1:3308170-3308189 | MS.gene024658:intron | 30.0% | |
TGGACCAGATTATACTATAT+AGG | - | chr5.1:3309337-3309356 | None:intergenic | 30.0% | |
TTCATGAATGTTAGTCATTG+AGG | - | chr5.1:3309851-3309870 | None:intergenic | 30.0% | |
TTTAATGAGTCTTTAGTGCT+TGG | + | chr5.1:3309217-3309236 | MS.gene024658:CDS | 30.0% | |
TTTGCTTGTCTGAAAAGAAA+AGG | - | chr5.1:3307801-3307820 | None:intergenic | 30.0% | |
! | ATTTCTGGGCCAAAATTTAT+TGG | - | chr5.1:3310552-3310571 | None:intergenic | 30.0% |
! | TTGTCCTTCCAATTTTCAAA+TGG | + | chr5.1:3308833-3308852 | MS.gene024658:CDS | 30.0% |
! | TTTGCTAGAGTATCTAATAC+TGG | - | chr5.1:3308385-3308404 | None:intergenic | 30.0% |
! | TTTTCAGCTTAAATTCTGCA+AGG | - | chr5.1:3310281-3310300 | None:intergenic | 30.0% |
!! | CCTATCTTCTAAAACCTTTA+AGG | + | chr5.1:3307538-3307557 | MS.gene024658:CDS | 30.0% |
!! | TCACATTTACTGCTTGTTTT+GGG | + | chr5.1:3309149-3309168 | MS.gene024658:CDS | 30.0% |
!! | TTGGTTCTAAAGGATTTCTT+TGG | + | chr5.1:3307701-3307720 | MS.gene024658:intron | 30.0% |
!!! | AGTGGTTAATCACTTTTTAG+TGG | + | chr5.1:3310173-3310192 | MS.gene024658:CDS | 30.0% |
!!! | CCTTAAAGGTTTTAGAAGAT+AGG | - | chr5.1:3307541-3307560 | None:intergenic | 30.0% |
!!! | GGTGGTTAAAAGTTTTAACT+CGG | - | chr5.1:3308653-3308672 | None:intergenic | 30.0% |
AAAATAGAGGATCTTGTGTC+TGG | + | chr5.1:3309034-3309053 | MS.gene024658:CDS | 35.0% | |
AAACCACTTTCTATTCTGAG+AGG | + | chr5.1:3308061-3308080 | MS.gene024658:intron | 35.0% | |
ACAAAAATTCCAACTGAGCA+TGG | - | chr5.1:3310012-3310031 | None:intergenic | 35.0% | |
ACTCTCATTGTTGTATTGCA+TGG | - | chr5.1:3307841-3307860 | None:intergenic | 35.0% | |
AGGTAGCAATAAGACTCATA+GGG | + | chr5.1:3307761-3307780 | MS.gene024658:intron | 35.0% | |
ATAGAAAGAATATGAGGCCA+AGG | - | chr5.1:3308408-3308427 | None:intergenic | 35.0% | |
ATAGAGGAACATTCACATGA+AGG | + | chr5.1:3310570-3310589 | MS.gene024658:CDS | 35.0% | |
ATCTAATACTGGAAGACTCT+TGG | - | chr5.1:3308374-3308393 | None:intergenic | 35.0% | |
ATTGTTGTATTGCATGGCAA+TGG | - | chr5.1:3307835-3307854 | None:intergenic | 35.0% | |
CACAAACTTGACTTAGTTTC+TGG | - | chr5.1:3309807-3309826 | None:intergenic | 35.0% | |
CACATCTAATGGTGTATTTC+AGG | + | chr5.1:3307437-3307456 | MS.gene024658:CDS | 35.0% | |
CATATCTGCAAAATAGCCAA+GGG | - | chr5.1:3307489-3307508 | None:intergenic | 35.0% | |
CATATGTATAACTCATCGAC+CGG | - | chr5.1:3308886-3308905 | None:intergenic | 35.0% | |
CCACTTGACACAAAATAAAG+TGG | - | chr5.1:3309070-3309089 | None:intergenic | 35.0% | |
CCATCCATTTGAAAATTGGA+AGG | - | chr5.1:3308840-3308859 | None:intergenic | 35.0% | |
CTGAAATACACCATTAGATG+TGG | - | chr5.1:3307439-3307458 | None:intergenic | 35.0% | |
CTTGATGAATAGTAAAGGCT+TGG | + | chr5.1:3309243-3309262 | MS.gene024658:CDS | 35.0% | |
TAAATCAATCTCAGAGGATG+AGG | + | chr5.1:3310251-3310270 | MS.gene024658:CDS | 35.0% | |
TAACCACTAATCTTATGCCA+GGG | - | chr5.1:3310161-3310180 | None:intergenic | 35.0% | |
TAGTGGAGTCTACTATCTTA+GGG | + | chr5.1:3310190-3310209 | MS.gene024658:CDS | 35.0% | |
TATCCATCACAGTGATTCAT+AGG | - | chr5.1:3309369-3309388 | None:intergenic | 35.0% | |
TATTTGATGTATGCATCTGC+AGG | + | chr5.1:3309387-3309406 | MS.gene024658:intron | 35.0% | |
TCCCATATATACGAGAAATG+CGG | - | chr5.1:3308584-3308603 | None:intergenic | 35.0% | |
TCCGCATTTCTCGTATATAT+GGG | + | chr5.1:3308580-3308599 | MS.gene024658:CDS | 35.0% | |
TCTAATACTGGAAGACTCTT+GGG | - | chr5.1:3308373-3308392 | None:intergenic | 35.0% | |
TGAAAATTGGAAGGACAATG+AGG | - | chr5.1:3308831-3308850 | None:intergenic | 35.0% | |
TGATGCAACAGTATCACAAT+GGG | + | chr5.1:3310523-3310542 | MS.gene024658:CDS | 35.0% | |
TGTGAATGTTCCTCTATTTC+TGG | - | chr5.1:3310567-3310586 | None:intergenic | 35.0% | |
TTAACCACTAATCTTATGCC+AGG | - | chr5.1:3310162-3310181 | None:intergenic | 35.0% | |
TTAGATACTCTAGCAAACCT+TGG | + | chr5.1:3308388-3308407 | MS.gene024658:CDS | 35.0% | |
TTAGTGGAGTCTACTATCTT+AGG | + | chr5.1:3310189-3310208 | MS.gene024658:CDS | 35.0% | |
TTCCGCATTTCTCGTATATA+TGG | + | chr5.1:3308579-3308598 | MS.gene024658:CDS | 35.0% | |
! | AAACTTTTAACCACCAGTGT+CGG | + | chr5.1:3308658-3308677 | MS.gene024658:CDS | 35.0% |
! | CCTTCCAATTTTCAAATGGA+TGG | + | chr5.1:3308837-3308856 | MS.gene024658:CDS | 35.0% |
! | GTCACATTTACTGCTTGTTT+TGG | + | chr5.1:3309148-3309167 | MS.gene024658:CDS | 35.0% |
! | GTGAATGTTCCTCTATTTCT+GGG | - | chr5.1:3310566-3310585 | None:intergenic | 35.0% |
! | GTTGGAATTTTTGTTGATCG+CGG | + | chr5.1:3310018-3310037 | MS.gene024658:CDS | 35.0% |
! | TCCTGTATTAGCTCGTATTT+TGG | + | chr5.1:3308627-3308646 | MS.gene024658:CDS | 35.0% |
! | TTGATTTGAGTTTGGACAAG+CGG | - | chr5.1:3307915-3307934 | None:intergenic | 35.0% |
!! | AAATTTTGGCCCAGAAATAG+AGG | + | chr5.1:3310554-3310573 | MS.gene024658:CDS | 35.0% |
!! | AATGGGGTGCCAATAAATTT+TGG | + | chr5.1:3310540-3310559 | MS.gene024658:CDS | 35.0% |
!! | CTATGTTTGGAGCTTGTTTT+TGG | + | chr5.1:3308965-3308984 | MS.gene024658:intron | 35.0% |
!! | CTGTACCATTAGTATTGATG+AGG | - | chr5.1:3309701-3309720 | None:intergenic | 35.0% |
!! | TGCGGAAGTATTTACATCTT+TGG | - | chr5.1:3308566-3308585 | None:intergenic | 35.0% |
!!! | AAACCTTTGCGCTTTTTTAG+AGG | - | chr5.1:3308140-3308159 | None:intergenic | 35.0% |
!!! | AACCTTTGCGCTTTTTTAGA+GGG | - | chr5.1:3308139-3308158 | None:intergenic | 35.0% |
!!! | ATTTTTAGCAGGCATAGAGT+TGG | + | chr5.1:3308426-3308445 | MS.gene024658:CDS | 35.0% |
!!! | CCACTTTATTTTGTGTCAAG+TGG | + | chr5.1:3309067-3309086 | MS.gene024658:CDS | 35.0% |
!!! | CTTGTTTTGGGAAGATTGTT+GGG | + | chr5.1:3309161-3309180 | MS.gene024658:CDS | 35.0% |
!!! | GGAATTTTGGTTCCAAAAGA+TGG | + | chr5.1:3308986-3309005 | MS.gene024658:CDS | 35.0% |
!!! | GGAGCTTGTTTTTGGAATTT+TGG | + | chr5.1:3308973-3308992 | MS.gene024658:intron | 35.0% |
!!! | TTTATTTTAGAAGGGAGGGA+GGG | + | chr5.1:3308219-3308238 | MS.gene024658:intron | 35.0% |
!!! | TTTTATTTTAGAAGGGAGGG+AGG | + | chr5.1:3308218-3308237 | MS.gene024658:intron | 35.0% |
AAATGGGAGAATGATGACTG+CGG | - | chr5.1:3309905-3309924 | None:intergenic | 40.0% | |
ACCAACATAGCTACCATTCA+GGG | + | chr5.1:3309097-3309116 | MS.gene024658:CDS | 40.0% | |
ACCTCTCGGAAAATTCTTTC+AGG | - | chr5.1:3309678-3309697 | None:intergenic | 40.0% | |
AGAATCTCTGCAATAACTCG+TGG | - | chr5.1:3307567-3307586 | None:intergenic | 40.0% | |
AGATTCTGACCATGTTATCG+TGG | + | chr5.1:3309768-3309787 | MS.gene024658:CDS | 40.0% | |
AGTGGAGTCTACTATCTTAG+GGG | + | chr5.1:3310191-3310210 | MS.gene024658:CDS | 40.0% | |
AGTTGGATCCTAAATCTCTG+CGG | + | chr5.1:3308443-3308462 | MS.gene024658:CDS | 40.0% | |
ATAACTCGTGGTTGCCTTAA+AGG | - | chr5.1:3307555-3307574 | None:intergenic | 40.0% | |
ATAAGCTTACCCTTTGCACT+AGG | + | chr5.1:3308505-3308524 | MS.gene024658:CDS | 40.0% | |
ATGACTTCGAATACTACAGC+TGG | + | chr5.1:3307387-3307406 | MS.gene024658:CDS | 40.0% | |
ATGGGGAAACTCTGATTTAG+AGG | + | chr5.1:3307741-3307760 | MS.gene024658:intron | 40.0% | |
ATTGAGGAGATTGCTACCAT+TGG | - | chr5.1:3309835-3309854 | None:intergenic | 40.0% | |
ATTGTAATGTGTGTCATGGC+TGG | + | chr5.1:3308267-3308286 | MS.gene024658:intron | 40.0% | |
CATAGAGCTTGAATGAGGAA+AGG | + | chr5.1:3308175-3308194 | MS.gene024658:intron | 40.0% | |
CATGAGAACCATAATGGCAA+AGG | - | chr5.1:3309428-3309447 | None:intergenic | 40.0% | |
CCAATGAAGTCCACATCTAA+TGG | + | chr5.1:3307426-3307445 | MS.gene024658:CDS | 40.0% | |
CCATTAGATGTGGACTTCAT+TGG | - | chr5.1:3307429-3307448 | None:intergenic | 40.0% | |
CGCTGACCTTTATTCCAAAA+TGG | - | chr5.1:3309745-3309764 | None:intergenic | 40.0% | |
CTTCCTCTCAGAATAGAAAG+TGG | - | chr5.1:3308067-3308086 | None:intergenic | 40.0% | |
CTTTGCCATTATGGTTCTCA+TGG | + | chr5.1:3309426-3309445 | MS.gene024658:CDS | 40.0% | |
GAACCAATTCCTAGTGCAAA+GGG | - | chr5.1:3308517-3308536 | None:intergenic | 40.0% | |
GAGGTAGCAATAAGACTCAT+AGG | + | chr5.1:3307760-3307779 | MS.gene024658:intron | 40.0% | |
GAGGTCCTCATCAATACTAA+TGG | + | chr5.1:3309693-3309712 | MS.gene024658:CDS | 40.0% | |
GATGCAACAGTATCACAATG+GGG | + | chr5.1:3310524-3310543 | MS.gene024658:CDS | 40.0% | |
GATTGCAGGAATTAAACTCG+CGG | - | chr5.1:3310374-3310393 | None:intergenic | 40.0% | |
GCATATCTGCAAAATAGCCA+AGG | - | chr5.1:3307490-3307509 | None:intergenic | 40.0% | |
GCCAAAATACGAGCTAATAC+AGG | - | chr5.1:3308631-3308650 | None:intergenic | 40.0% | |
GTGATGCAACAGTATCACAA+TGG | + | chr5.1:3310522-3310541 | MS.gene024658:CDS | 40.0% | |
TAGCGGTAAATCAATCTCAG+AGG | + | chr5.1:3310245-3310264 | MS.gene024658:CDS | 40.0% | |
TCGATCAAGTTTATCACCGA+CGG | - | chr5.1:3309604-3309623 | None:intergenic | 40.0% | |
TCTTGATTATGCACTTCCCT+TGG | + | chr5.1:3307470-3307489 | MS.gene024658:CDS | 40.0% | |
TGATTCATAGGTCGTGAACA+TGG | - | chr5.1:3309357-3309376 | None:intergenic | 40.0% | |
TGCTCTTGTGGAGAAAATAG+AGG | + | chr5.1:3309021-3309040 | MS.gene024658:CDS | 40.0% | |
TGGGCCATCCATTTGAAAAT+TGG | - | chr5.1:3308844-3308863 | None:intergenic | 40.0% | |
TTACCCTTTGCACTAGGAAT+TGG | + | chr5.1:3308511-3308530 | MS.gene024658:CDS | 40.0% | |
TTAGATGTGGACTTCATTGG+TGG | - | chr5.1:3307426-3307445 | None:intergenic | 40.0% | |
TTATTCCGTCCAAATGCTGA+TGG | - | chr5.1:3308325-3308344 | None:intergenic | 40.0% | |
! | AAGGGAAGTGCATAATCAAG+AGG | - | chr5.1:3307471-3307490 | None:intergenic | 40.0% |
! | ACCTGAAAGAATTTTCCGAG+AGG | + | chr5.1:3309674-3309693 | MS.gene024658:CDS | 40.0% |
! | AGGGAAGTGCATAATCAAGA+GGG | - | chr5.1:3307470-3307489 | None:intergenic | 40.0% |
! | ATCTGTTTCTTGTGGGTCTA+AGG | + | chr5.1:3310391-3310410 | MS.gene024658:CDS | 40.0% |
! | ATTTTTGTTGATCGCGGACT+TGG | + | chr5.1:3310024-3310043 | MS.gene024658:CDS | 40.0% |
! | CCAAAAGATGGACCATTTTC+CGG | + | chr5.1:3308998-3309017 | MS.gene024658:CDS | 40.0% |
! | TCCTGCAATCTGTTTCTTGT+GGG | + | chr5.1:3310384-3310403 | MS.gene024658:CDS | 40.0% |
! | TTCCCTCTAAAAAAGCGCAA+AGG | + | chr5.1:3308134-3308153 | MS.gene024658:intron | 40.0% |
! | TTCCTGCAATCTGTTTCTTG+TGG | + | chr5.1:3310383-3310402 | MS.gene024658:CDS | 40.0% |
!! | TAGTATTGATGAGGACCTCT+CGG | - | chr5.1:3309692-3309711 | None:intergenic | 40.0% |
!! | TATTTTCTCCACAAGAGCAC+CGG | - | chr5.1:3309020-3309039 | None:intergenic | 40.0% |
!!! | GAAAAAACGGGTTGCCATTT+TGG | + | chr5.1:3309728-3309747 | MS.gene024658:CDS | 40.0% |
!!! | GCTTGTTTTGGGAAGATTGT+TGG | + | chr5.1:3309160-3309179 | MS.gene024658:CDS | 40.0% |
!!! | GGGTTGCCATTTTGGAATAA+AGG | + | chr5.1:3309736-3309755 | MS.gene024658:CDS | 40.0% |
AAAATGCAGACAGCCAGTTG+AGG | + | chr5.1:3309545-3309564 | MS.gene024658:CDS | 45.0% | |
AAATCTCTGCGGAAAACTGG+AGG | + | chr5.1:3308454-3308473 | MS.gene024658:CDS | 45.0% | |
AACTTGATCGAGGCTTCAAG+AGG | + | chr5.1:3309613-3309632 | MS.gene024658:CDS | 45.0% | |
AAGACCCAGAGTGAAACAAG+AGG | - | chr5.1:3308775-3308794 | None:intergenic | 45.0% | |
AATACTGGAAGACTCTTGGG+TGG | - | chr5.1:3308370-3308389 | None:intergenic | 45.0% | |
ACCAAAACTGAGGCTGTTGT+GGG | - | chr5.1:3310504-3310523 | None:intergenic | 45.0% | |
ACCCACAAGAAACAGATTGC+AGG | - | chr5.1:3310388-3310407 | None:intergenic | 45.0% | |
ACGGAATATTCCTTGCACCA+TGG | - | chr5.1:3309585-3309604 | None:intergenic | 45.0% | |
AGAGCTTGAATGAGGAAAGG+AGG | + | chr5.1:3308178-3308197 | MS.gene024658:intron | 45.0% | |
AGAGTGAAACAAGAGGAGAC+TGG | - | chr5.1:3308768-3308787 | None:intergenic | 45.0% | |
AGCTTGAATGAGGAAAGGAG+GGG | + | chr5.1:3308180-3308199 | MS.gene024658:intron | 45.0% | |
AGGAGATTGCTACCATTGGA+CGG | - | chr5.1:3309831-3309850 | None:intergenic | 45.0% | |
ATACTGGAAGACTCTTGGGT+GGG | - | chr5.1:3308369-3308388 | None:intergenic | 45.0% | |
CAACATCGGTAACGATCGAA+AGG | + | chr5.1:3309282-3309301 | MS.gene024658:CDS | 45.0% | |
CAGACAAGCAAAGAGTCACT+AGG | + | chr5.1:3307809-3307828 | MS.gene024658:intron | 45.0% | |
CAGTTAATGATGTAGCAGCC+TGG | + | chr5.1:3308704-3308723 | MS.gene024658:CDS | 45.0% | |
CCAACATAGCTACCATTCAG+GGG | + | chr5.1:3309098-3309117 | MS.gene024658:CDS | 45.0% | |
CCATGTTATCGTGGCATTTG+AGG | + | chr5.1:3309777-3309796 | MS.gene024658:CDS | 45.0% | |
CCTAAATCTCTGCGGAAAAC+TGG | + | chr5.1:3308451-3308470 | MS.gene024658:CDS | 45.0% | |
CCTCAAATGCCACGATAACA+TGG | - | chr5.1:3309780-3309799 | None:intergenic | 45.0% | |
CCTTGTTCTTGCAGTCACAA+GGG | + | chr5.1:3307509-3307528 | MS.gene024658:CDS | 45.0% | |
CGAACCAATTCCTAGTGCAA+AGG | - | chr5.1:3308518-3308537 | None:intergenic | 45.0% | |
CGACCTATGAATCACTGTGA+TGG | + | chr5.1:3309363-3309382 | MS.gene024658:intron | 45.0% | |
CTCACCTTCATGGCATTGTT+GGG | - | chr5.1:3308863-3308882 | None:intergenic | 45.0% | |
CTGTTGCATCACCAAAACTG+AGG | - | chr5.1:3310514-3310533 | None:intergenic | 45.0% | |
CTTGTTCTTGCAGTCACAAG+GGG | + | chr5.1:3307510-3307529 | MS.gene024658:CDS | 45.0% | |
GACAGGGAGGAATACTACTT+GGG | + | chr5.1:3308299-3308318 | MS.gene024658:intron | 45.0% | |
GACCAACATAGCTACCATTC+AGG | + | chr5.1:3309096-3309115 | MS.gene024658:CDS | 45.0% | |
GACTGTGAAGCTCTTGCTTA+TGG | + | chr5.1:3310117-3310136 | MS.gene024658:CDS | 45.0% | |
GAGAGCCATGAGAACCATAA+TGG | - | chr5.1:3309434-3309453 | None:intergenic | 45.0% | |
GAGCTTGAATGAGGAAAGGA+GGG | + | chr5.1:3308179-3308198 | MS.gene024658:intron | 45.0% | |
GCGGATAGTAGCAACTGTTT+CGG | - | chr5.1:3310355-3310374 | None:intergenic | 45.0% | |
GGGTTTGTCACAGATGCTAT+TGG | + | chr5.1:3308934-3308953 | MS.gene024658:intron | 45.0% | |
GTCCTTGCAATTGCTATGGT+CGG | + | chr5.1:3308481-3308500 | MS.gene024658:CDS | 45.0% | |
GTCGGTGATAAACTTGATCG+AGG | + | chr5.1:3309603-3309622 | MS.gene024658:CDS | 45.0% | |
TCAAGTTTGTGTCCGTCCAA+TGG | + | chr5.1:3309816-3309835 | MS.gene024658:CDS | 45.0% | |
TCGAGTCCTTGCAATTGCTA+TGG | + | chr5.1:3308477-3308496 | MS.gene024658:CDS | 45.0% | |
TCTTGCTTATGGAGCTCGTA+TGG | + | chr5.1:3310128-3310147 | MS.gene024658:CDS | 45.0% | |
TGACAGGGAGGAATACTACT+TGG | + | chr5.1:3308298-3308317 | MS.gene024658:intron | 45.0% | |
TGACGAGACCTTTGCCATTA+TGG | + | chr5.1:3309417-3309436 | MS.gene024658:CDS | 45.0% | |
TGGTGCAAGGAATATTCCGT+CGG | + | chr5.1:3309585-3309604 | MS.gene024658:CDS | 45.0% | |
TGTTTCACTCTGGGTCTTCT+TGG | + | chr5.1:3308777-3308796 | MS.gene024658:CDS | 45.0% | |
TTATACGCAGCCATCACAAG+AGG | - | chr5.1:3309478-3309497 | None:intergenic | 45.0% | |
TTCCGACCATAGCAATTGCA+AGG | - | chr5.1:3308486-3308505 | None:intergenic | 45.0% | |
TTCGATCGTTACCGATGTTG+AGG | - | chr5.1:3309282-3309301 | None:intergenic | 45.0% | |
TTGTGATGGCTGCGTATAAG+CGG | + | chr5.1:3309479-3309498 | MS.gene024658:CDS | 45.0% | |
! | AGACTGGCTATTGCCTGATA+AGG | - | chr5.1:3308752-3308771 | None:intergenic | 45.0% |
! | AGTCTCCTCTTGTTTCACTC+TGG | + | chr5.1:3308767-3308786 | MS.gene024658:CDS | 45.0% |
! | CCAGTTTTCCGCAGAGATTT+AGG | - | chr5.1:3308454-3308473 | None:intergenic | 45.0% |
! | CCGGAAAATGGTCCATCTTT+TGG | - | chr5.1:3309001-3309020 | None:intergenic | 45.0% |
! | GTCTCCTCTTGTTTCACTCT+GGG | + | chr5.1:3308768-3308787 | MS.gene024658:CDS | 45.0% |
! | TAATCTTATGCCAGGGTGCT+CGG | - | chr5.1:3310154-3310173 | None:intergenic | 45.0% |
! | TGCTACACTAGCTTCTGTTC+TGG | + | chr5.1:3308906-3308925 | MS.gene024658:CDS | 45.0% |
! | TGTGTGGCTGTGCTTTTCTT+TGG | + | chr5.1:3310084-3310103 | MS.gene024658:CDS | 45.0% |
!! | GTAGATAACGGAGTCATCAC+TGG | - | chr5.1:3310307-3310326 | None:intergenic | 45.0% |
!! | ATTGTAAAATTATATAAAAA+TGG | - | chr5.1:3307873-3307892 | None:intergenic | 5.0% |
ACAATGCCATGAAGGTGAGC+CGG | + | chr5.1:3308864-3308883 | MS.gene024658:CDS | 50.0% | |
AGCAGGCAAGAATCCTCAAC+TGG | - | chr5.1:3309561-3309580 | None:intergenic | 50.0% | |
AGGATTCTTGCCTGCTTCCA+TGG | + | chr5.1:3309565-3309584 | MS.gene024658:CDS | 50.0% | |
ATGGCCCAACAATGCCATGA+AGG | + | chr5.1:3308856-3308875 | MS.gene024658:CDS | 50.0% | |
ATTCAGGGGCTGCAATCTTG+GGG | + | chr5.1:3309112-3309131 | MS.gene024658:CDS | 50.0% | |
ATTCCTTGCACCATGGAAGC+AGG | - | chr5.1:3309578-3309597 | None:intergenic | 50.0% | |
CACAAGAGGAGTGGTCATGA+AGG | - | chr5.1:3309464-3309483 | None:intergenic | 50.0% | |
CACCAAAACTGAGGCTGTTG+TGG | - | chr5.1:3310505-3310524 | None:intergenic | 50.0% | |
CATGACCACTCCTCTTGTGA+TGG | + | chr5.1:3309465-3309484 | MS.gene024658:CDS | 50.0% | |
CATTCAGGGGCTGCAATCTT+GGG | + | chr5.1:3309111-3309130 | MS.gene024658:CDS | 50.0% | |
CCAAAACTGAGGCTGTTGTG+GGG | - | chr5.1:3310503-3310522 | None:intergenic | 50.0% | |
CCCCTGAATGGTAGCTATGT+TGG | - | chr5.1:3309101-3309120 | None:intergenic | 50.0% | |
CCCTTGTGACTGCAAGAACA+AGG | - | chr5.1:3307512-3307531 | None:intergenic | 50.0% | |
CTACTTGGGCCATCAGCATT+TGG | + | chr5.1:3308313-3308332 | MS.gene024658:CDS | 50.0% | |
GACGTTGGAGACTCATCTAG+CGG | + | chr5.1:3310228-3310247 | MS.gene024658:CDS | 50.0% | |
GATACCAACAAGCCACCAAC+AGG | - | chr5.1:3310471-3310490 | None:intergenic | 50.0% | |
GATGTGGACTTCATTGGTGG+CGG | - | chr5.1:3307423-3307442 | None:intergenic | 50.0% | |
GCACCCTGGCATAAGATTAG+TGG | + | chr5.1:3310155-3310174 | MS.gene024658:CDS | 50.0% | |
GCTCACCTTCATGGCATTGT+TGG | - | chr5.1:3308864-3308883 | None:intergenic | 50.0% | |
TGCGGCTCTCTTTCTTTCAG+CGG | - | chr5.1:3309887-3309906 | None:intergenic | 50.0% | |
TGTCGGACGAATGGCTATGT+CGG | + | chr5.1:3308675-3308694 | MS.gene024658:CDS | 50.0% | |
TTGGGCCATCAGCATTTGGA+CGG | + | chr5.1:3308317-3308336 | MS.gene024658:CDS | 50.0% | |
TTTGTTGATCGCGGACTTGG+TGG | + | chr5.1:3310027-3310046 | MS.gene024658:CDS | 50.0% | |
! | ACCATTTTCCGGTGCTCTTG+TGG | + | chr5.1:3309009-3309028 | MS.gene024658:CDS | 50.0% |
! | ATGGCTGGCTGCTTATTGAC+AGG | + | chr5.1:3308282-3308301 | MS.gene024658:intron | 50.0% |
! | ATGTGGACTTCATTGGTGGC+GGG | - | chr5.1:3307422-3307441 | None:intergenic | 50.0% |
! | GCCTTGTTCTTGCAGTCACA+AGG | + | chr5.1:3307508-3307527 | MS.gene024658:CDS | 50.0% |
! | GCTGTGCTTTTCTTTGGTGG+TGG | + | chr5.1:3310090-3310109 | MS.gene024658:CDS | 50.0% |
! | GTGGCTGTGCTTTTCTTTGG+TGG | + | chr5.1:3310087-3310106 | MS.gene024658:CDS | 50.0% |
! | TAGCTTCTGTTCTGGCTGCT+GGG | + | chr5.1:3308914-3308933 | MS.gene024658:CDS | 50.0% |
! | TCTAAGGCCAACCGGTGAAT+TGG | + | chr5.1:3310407-3310426 | MS.gene024658:CDS | 50.0% |
! | TGGCTGGCTGCTTATTGACA+GGG | + | chr5.1:3308283-3308302 | MS.gene024658:intron | 50.0% |
!! | GAGATTACCAGCGTTGACGT+TGG | + | chr5.1:3310213-3310232 | MS.gene024658:CDS | 50.0% |
!! | TCCACAAGAGCACCGGAAAA+TGG | - | chr5.1:3309013-3309032 | None:intergenic | 50.0% |
AGCCAGAGCAAGAAGGATCC+AGG | - | chr5.1:3308725-3308744 | None:intergenic | 55.0% | |
AGCCTGGATCCTTCTTGCTC+TGG | + | chr5.1:3308720-3308739 | MS.gene024658:CDS | 55.0% | |
AGGCAACAGCCAGAGCAAGA+AGG | - | chr5.1:3308732-3308751 | None:intergenic | 55.0% | |
AGGCTGTTGTGGGGCAATCT+TGG | - | chr5.1:3310494-3310513 | None:intergenic | 55.0% | |
CACCAACAGGTCCTAGTTCC+GGG | - | chr5.1:3310458-3310477 | None:intergenic | 55.0% | |
CACTCTGGGTCTTCTTGGCT+GGG | + | chr5.1:3308782-3308801 | MS.gene024658:CDS | 55.0% | |
CAGAGCACAGGCCAATTCAC+CGG | - | chr5.1:3310421-3310440 | None:intergenic | 55.0% | |
CATAGCCATTCGTCCGACAC+TGG | - | chr5.1:3308674-3308693 | None:intergenic | 55.0% | |
CCAAGATTGCAGCCCCTGAA+TGG | - | chr5.1:3309113-3309132 | None:intergenic | 55.0% | |
CCACCAACAGGTCCTAGTTC+CGG | - | chr5.1:3310459-3310478 | None:intergenic | 55.0% | |
CCATTCAGGGGCTGCAATCT+TGG | + | chr5.1:3309110-3309129 | MS.gene024658:CDS | 55.0% | |
CTCGCTTCTTTCCAGAGCAC+AGG | - | chr5.1:3310433-3310452 | None:intergenic | 55.0% | |
CTGGCTGCTTATTGACAGGG+AGG | + | chr5.1:3308286-3308305 | MS.gene024658:intron | 55.0% | |
GAGCATGCACCATGCTCAGT+TGG | + | chr5.1:3310000-3310019 | MS.gene024658:CDS | 55.0% | |
GCTCTGGCTGTTGCCTTATC+AGG | + | chr5.1:3308736-3308755 | MS.gene024658:CDS | 55.0% | |
GGCTGTTGTGGGGCAATCTT+GGG | - | chr5.1:3310493-3310512 | None:intergenic | 55.0% | |
TCACTCTGGGTCTTCTTGGC+TGG | + | chr5.1:3308781-3308800 | MS.gene024658:CDS | 55.0% | |
TCTGGAAAGAAGCGAGTGCC+CGG | + | chr5.1:3310437-3310456 | MS.gene024658:CDS | 55.0% | |
TCTTGCAGTCACAAGGGGAC+TGG | + | chr5.1:3307515-3307534 | MS.gene024658:CDS | 55.0% | |
TGAGTCTCCAACGTCAACGC+TGG | - | chr5.1:3310223-3310242 | None:intergenic | 55.0% | |
TTGCCTGCTTCCATGGTGCA+AGG | + | chr5.1:3309572-3309591 | MS.gene024658:CDS | 55.0% | |
! | AACCACCAGTGTCGGACGAA+TGG | + | chr5.1:3308666-3308685 | MS.gene024658:CDS | 55.0% |
! | ACGAATGGCTATGTCGGCTG+CGG | + | chr5.1:3308681-3308700 | MS.gene024658:CDS | 55.0% |
! | CCCCACAACAGCCTCAGTTT+TGG | + | chr5.1:3310500-3310519 | MS.gene024658:CDS | 55.0% |
! | CTAGCTTCTGTTCTGGCTGC+TGG | + | chr5.1:3308913-3308932 | MS.gene024658:CDS | 55.0% |
! | CTTGTGGGTCTAAGGCCAAC+CGG | + | chr5.1:3310399-3310418 | MS.gene024658:CDS | 55.0% |
!! | AGGACCTGTTGGTGGCTTGT+TGG | + | chr5.1:3310464-3310483 | MS.gene024658:CDS | 55.0% |
AGAAGCGAGTGCCCGGAACT+AGG | + | chr5.1:3310444-3310463 | MS.gene024658:CDS | 60.0% | |
AGCCATTCGTCCGACACTGG+TGG | - | chr5.1:3308671-3308690 | None:intergenic | 60.0% | |
CCGGAACTAGGACCTGTTGG+TGG | + | chr5.1:3310456-3310475 | MS.gene024658:CDS | 60.0% | |
CGCAGCCATCACAAGAGGAG+TGG | - | chr5.1:3309473-3309492 | None:intergenic | 60.0% | |
GCACAGGCCAATTCACCGGT+TGG | - | chr5.1:3310417-3310436 | None:intergenic | 60.0% | |
TGCCCGGAACTAGGACCTGT+TGG | + | chr5.1:3310453-3310472 | MS.gene024658:CDS | 60.0% | |
TGGGTCTTCTTGGCTGGGTG+TGG | + | chr5.1:3308787-3308806 | MS.gene024658:CDS | 60.0% | |
! | CATCGACCGGCTCACCTTCA+TGG | - | chr5.1:3308873-3308892 | None:intergenic | 60.0% |
! | CGGTGAATTGGCCTGTGCTC+TGG | + | chr5.1:3310419-3310438 | MS.gene024658:CDS | 60.0% |
GCTCGTATGGCCGAGCACCC+TGG | + | chr5.1:3310141-3310160 | MS.gene024658:CDS | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5.1 | gene | 3307387 | 3310602 | 3307387 | ID=MS.gene024658 |
chr5.1 | mRNA | 3307387 | 3310602 | 3307387 | ID=MS.gene024658.t1;Parent=MS.gene024658 |
chr5.1 | exon | 3307387 | 3307587 | 3307387 | ID=MS.gene024658.t1.exon1;Parent=MS.gene024658.t1 |
chr5.1 | CDS | 3307387 | 3307587 | 3307387 | ID=cds.MS.gene024658.t1;Parent=MS.gene024658.t1 |
chr5.1 | exon | 3308304 | 3308939 | 3308304 | ID=MS.gene024658.t1.exon2;Parent=MS.gene024658.t1 |
chr5.1 | CDS | 3308304 | 3308939 | 3308304 | ID=cds.MS.gene024658.t1;Parent=MS.gene024658.t1 |
chr5.1 | exon | 3308977 | 3309303 | 3308977 | ID=MS.gene024658.t1.exon3;Parent=MS.gene024658.t1 |
chr5.1 | CDS | 3308977 | 3309303 | 3308977 | ID=cds.MS.gene024658.t1;Parent=MS.gene024658.t1 |
chr5.1 | exon | 3309409 | 3310602 | 3309409 | ID=MS.gene024658.t1.exon4;Parent=MS.gene024658.t1 |
chr5.1 | CDS | 3309409 | 3310602 | 3309409 | ID=cds.MS.gene024658.t1;Parent=MS.gene024658.t1 |
Gene Sequence |
Protein sequence |