Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene018570.t1 | AES81712.2 | 89.8 | 872 | 41 | 4 | 1 | 852 | 1 | 844 | 0.00E+00 | 1468 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene018570.t1 | Q9M353 | 64.8 | 833 | 272 | 10 | 1 | 823 | 1 | 822 | 2.6e-296 | 1019.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene018570.t1 | G7KZM7 | 89.8 | 872 | 41 | 4 | 1 | 852 | 1 | 844 | 0.0e+00 | 1468.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene018570 | MS.gene024658 | PPI |
| MS.gene018570 | MS.gene072755 | PPI |
| MS.gene018570 | MS.gene21627 | PPI |
| MS.gene030201 | MS.gene018570 | PPI |
| MS.gene018570 | MS.gene26746 | PPI |
| MS.gene018570 | MS.gene031733 | PPI |
| MS.gene018570 | MS.gene072756 | PPI |
| MS.gene018570 | MS.gene006576 | PPI |
| MS.gene018570 | MS.gene065903 | PPI |
| MS.gene018570 | MS.gene024657 | PPI |
| MS.gene018570 | MS.gene68584 | PPI |
| MS.gene22334 | MS.gene018570 | PPI |
| MS.gene018570 | MS.gene030202 | PPI |
| MS.gene22333 | MS.gene018570 | PPI |
| MS.gene018570 | MS.gene21639 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene018570.t1 | MTR_7g099750 | 89.794 | 872 | 41 | 4 | 1 | 852 | 1 | 844 | 0.0 | 1483 |
| MS.gene018570.t1 | MTR_7g099800 | 84.174 | 853 | 132 | 3 | 1 | 852 | 1 | 851 | 0.0 | 1380 |
| MS.gene018570.t1 | MTR_7g099820 | 56.469 | 827 | 311 | 15 | 9 | 824 | 5 | 793 | 0.0 | 847 |
| MS.gene018570.t1 | MTR_7g099820 | 58.114 | 721 | 259 | 11 | 9 | 723 | 5 | 688 | 0.0 | 773 |
| MS.gene018570.t1 | MTR_5g009770 | 50.493 | 812 | 350 | 17 | 8 | 816 | 15 | 777 | 0.0 | 744 |
| MS.gene018570.t1 | MTR_5g009780 | 49.384 | 812 | 361 | 16 | 8 | 816 | 15 | 779 | 0.0 | 725 |
| MS.gene018570.t1 | MTR_4g123583 | 50.000 | 820 | 360 | 17 | 8 | 819 | 12 | 789 | 0.0 | 709 |
| MS.gene018570.t1 | MTR_4g078120 | 49.229 | 843 | 373 | 16 | 8 | 832 | 12 | 817 | 0.0 | 708 |
| MS.gene018570.t1 | MTR_5g009800 | 47.783 | 812 | 353 | 16 | 8 | 816 | 15 | 758 | 0.0 | 689 |
| MS.gene018570.t1 | MTR_8g093780 | 41.966 | 834 | 442 | 16 | 11 | 840 | 20 | 815 | 0.0 | 637 |
| MS.gene018570.t1 | MTR_3g096380 | 43.873 | 816 | 402 | 21 | 11 | 816 | 21 | 790 | 0.0 | 634 |
| MS.gene018570.t1 | MTR_5g009770 | 48.629 | 693 | 304 | 17 | 127 | 816 | 3 | 646 | 0.0 | 588 |
| MS.gene018570.t1 | MTR_2g011520 | 40.640 | 812 | 428 | 17 | 10 | 816 | 2 | 764 | 0.0 | 583 |
| MS.gene018570.t1 | MTR_1g043400 | 31.835 | 823 | 502 | 17 | 10 | 818 | 10 | 787 | 3.73e-126 | 399 |
| MS.gene018570.t1 | MTR_3g031170 | 33.211 | 816 | 463 | 21 | 11 | 816 | 36 | 779 | 7.79e-124 | 392 |
| MS.gene018570.t1 | MTR_1g045870 | 31.228 | 839 | 499 | 19 | 10 | 834 | 10 | 784 | 1.83e-119 | 380 |
| MS.gene018570.t1 | MTR_2g040100 | 30.216 | 834 | 492 | 25 | 15 | 816 | 35 | 810 | 1.38e-112 | 363 |
| MS.gene018570.t1 | MTR_3g037270 | 29.730 | 814 | 512 | 19 | 15 | 816 | 24 | 789 | 1.90e-110 | 357 |
| MS.gene018570.t1 | MTR_0002s1180 | 29.779 | 816 | 518 | 16 | 11 | 816 | 16 | 786 | 1.09e-109 | 355 |
| MS.gene018570.t1 | MTR_5g067690 | 29.283 | 823 | 513 | 18 | 11 | 816 | 22 | 792 | 3.77e-109 | 354 |
| MS.gene018570.t1 | MTR_3g071990 | 29.016 | 803 | 510 | 17 | 15 | 816 | 23 | 766 | 1.83e-108 | 352 |
| MS.gene018570.t1 | MTR_5g074340 | 29.529 | 850 | 521 | 23 | 11 | 839 | 30 | 822 | 7.75e-104 | 340 |
| MS.gene018570.t1 | MTR_3g037260 | 29.009 | 817 | 516 | 19 | 15 | 816 | 20 | 787 | 8.83e-104 | 340 |
| MS.gene018570.t1 | MTR_5g074360 | 28.808 | 847 | 520 | 25 | 12 | 836 | 31 | 816 | 2.65e-97 | 322 |
| MS.gene018570.t1 | MTR_3g071880 | 28.589 | 829 | 508 | 23 | 12 | 814 | 20 | 790 | 1.38e-96 | 320 |
| MS.gene018570.t1 | MTR_5g074380 | 28.183 | 809 | 520 | 17 | 12 | 816 | 76 | 827 | 1.78e-94 | 316 |
| MS.gene018570.t1 | MTR_3g071990 | 28.997 | 738 | 464 | 17 | 80 | 816 | 6 | 684 | 2.52e-94 | 312 |
| MS.gene018570.t1 | MTR_3g071870 | 27.649 | 821 | 522 | 21 | 12 | 814 | 33 | 799 | 6.31e-92 | 308 |
| MS.gene018570.t1 | MTR_7g085870 | 27.711 | 830 | 518 | 21 | 9 | 815 | 24 | 794 | 8.57e-87 | 294 |
| MS.gene018570.t1 | MTR_5g074320 | 28.035 | 799 | 496 | 23 | 61 | 843 | 10 | 745 | 3.60e-86 | 291 |
| MS.gene018570.t1 | MTR_6g053320 | 27.178 | 769 | 471 | 23 | 74 | 820 | 69 | 770 | 5.28e-83 | 283 |
| MS.gene018570.t1 | MTR_3g031160 | 27.995 | 818 | 507 | 24 | 11 | 816 | 31 | 778 | 8.46e-83 | 282 |
| MS.gene018570.t1 | MTR_3g498715 | 26.355 | 812 | 520 | 18 | 12 | 811 | 43 | 788 | 3.35e-81 | 278 |
| MS.gene018570.t1 | MTR_6g015940 | 26.265 | 830 | 509 | 19 | 12 | 816 | 35 | 786 | 5.86e-81 | 277 |
| MS.gene018570.t1 | MTR_5g088470 | 24.939 | 818 | 540 | 21 | 12 | 816 | 33 | 789 | 1.81e-76 | 265 |
| MS.gene018570.t1 | MTR_8g085260 | 25.511 | 831 | 516 | 17 | 12 | 816 | 37 | 790 | 6.74e-76 | 263 |
| MS.gene018570.t1 | MTR_4g037755 | 26.918 | 795 | 499 | 23 | 43 | 816 | 36 | 769 | 3.60e-73 | 256 |
| MS.gene018570.t1 | MTR_3g031030 | 27.633 | 807 | 490 | 30 | 35 | 816 | 28 | 765 | 1.02e-72 | 254 |
| MS.gene018570.t1 | MTR_5g088430 | 25.576 | 825 | 526 | 25 | 12 | 816 | 33 | 789 | 2.28e-71 | 251 |
| MS.gene018570.t1 | MTR_4g029520 | 25.866 | 808 | 523 | 27 | 31 | 816 | 25 | 778 | 1.28e-70 | 249 |
| MS.gene018570.t1 | MTR_5g088450 | 24.455 | 826 | 537 | 22 | 12 | 816 | 33 | 792 | 2.57e-70 | 248 |
| MS.gene018570.t1 | MTR_3g083850 | 25.061 | 822 | 530 | 22 | 12 | 816 | 33 | 785 | 5.12e-69 | 244 |
| MS.gene018570.t1 | MTR_3g110700 | 26.724 | 812 | 511 | 27 | 31 | 816 | 22 | 775 | 2.21e-68 | 242 |
| MS.gene018570.t1 | MTR_5g088840 | 24.672 | 839 | 532 | 22 | 9 | 816 | 47 | 816 | 6.85e-67 | 239 |
| MS.gene018570.t1 | MTR_7g052680 | 24.939 | 826 | 545 | 22 | 9 | 816 | 47 | 815 | 3.33e-66 | 237 |
| MS.gene018570.t1 | MTR_5g088790 | 24.848 | 825 | 547 | 20 | 9 | 816 | 47 | 815 | 4.30e-66 | 236 |
| MS.gene018570.t1 | MTR_7g053000 | 24.909 | 823 | 549 | 21 | 9 | 816 | 47 | 815 | 2.21e-65 | 234 |
| MS.gene018570.t1 | MTR_7g052970 | 24.909 | 823 | 549 | 21 | 9 | 816 | 47 | 815 | 1.38e-64 | 232 |
| MS.gene018570.t1 | MTR_3g465680 | 29.534 | 386 | 261 | 6 | 13 | 396 | 44 | 420 | 9.60e-47 | 181 |
| MS.gene018570.t1 | MTR_3g465680 | 27.465 | 426 | 231 | 20 | 404 | 816 | 556 | 916 | 3.18e-28 | 122 |
| MS.gene018570.t1 | MTR_7g052895 | 22.562 | 523 | 379 | 9 | 9 | 517 | 47 | 557 | 1.89e-37 | 150 |
| MS.gene018570.t1 | MTR_5g083560 | 27.887 | 355 | 188 | 12 | 478 | 818 | 1 | 301 | 8.10e-26 | 110 |
| MS.gene018570.t1 | MTR_5g061460 | 47.475 | 99 | 49 | 3 | 464 | 561 | 15 | 111 | 1.87e-18 | 84.0 |
| MS.gene018570.t1 | MTR_1g082340 | 47.475 | 99 | 49 | 3 | 464 | 561 | 82 | 178 | 6.95e-18 | 84.3 |
| MS.gene018570.t1 | MTR_3g083860 | 26.020 | 196 | 102 | 7 | 12 | 200 | 33 | 192 | 2.18e-11 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene018570.t1 | AT3G53720 | 65.060 | 830 | 275 | 10 | 1 | 823 | 1 | 822 | 0.0 | 1003 |
| MS.gene018570.t1 | AT3G53720 | 63.576 | 755 | 260 | 10 | 76 | 823 | 3 | 749 | 0.0 | 877 |
| MS.gene018570.t1 | AT4G23700 | 48.157 | 814 | 387 | 13 | 8 | 816 | 12 | 795 | 0.0 | 723 |
| MS.gene018570.t1 | AT4G23700 | 48.157 | 814 | 387 | 13 | 8 | 816 | 12 | 795 | 0.0 | 723 |
| MS.gene018570.t1 | AT5G41610 | 49.204 | 817 | 369 | 16 | 8 | 819 | 13 | 788 | 0.0 | 709 |
| MS.gene018570.t1 | AT5G41610 | 49.204 | 817 | 369 | 16 | 8 | 819 | 13 | 788 | 0.0 | 709 |
| MS.gene018570.t1 | AT3G17630 | 50.491 | 814 | 345 | 16 | 8 | 817 | 14 | 773 | 0.0 | 704 |
| MS.gene018570.t1 | AT3G17630 | 50.491 | 814 | 345 | 16 | 8 | 817 | 14 | 773 | 0.0 | 704 |
| MS.gene018570.t1 | AT1G64170 | 46.796 | 827 | 379 | 16 | 2 | 816 | 15 | 792 | 0.0 | 682 |
| MS.gene018570.t1 | AT5G41610 | 48.489 | 761 | 346 | 15 | 64 | 819 | 1 | 720 | 0.0 | 631 |
| MS.gene018570.t1 | AT2G13620 | 44.498 | 836 | 410 | 20 | 11 | 836 | 22 | 813 | 0.0 | 623 |
| MS.gene018570.t1 | AT1G05580 | 32.721 | 816 | 483 | 19 | 16 | 819 | 41 | 802 | 9.62e-124 | 394 |
| MS.gene018570.t1 | AT2G31910 | 31.611 | 813 | 490 | 18 | 17 | 816 | 28 | 787 | 7.72e-113 | 364 |
| MS.gene018570.t1 | AT1G05580 | 33.019 | 742 | 433 | 17 | 89 | 819 | 3 | 691 | 1.91e-110 | 356 |
| MS.gene018570.t1 | AT2G31910 | 31.714 | 741 | 440 | 18 | 89 | 816 | 3 | 690 | 1.56e-98 | 323 |
| MS.gene018570.t1 | AT2G31910 | 31.714 | 741 | 440 | 18 | 89 | 816 | 3 | 690 | 1.56e-98 | 323 |
| MS.gene018570.t1 | AT1G06970 | 27.595 | 819 | 514 | 17 | 11 | 817 | 35 | 786 | 1.05e-95 | 318 |
| MS.gene018570.t1 | AT2G30240 | 26.406 | 818 | 524 | 18 | 11 | 817 | 37 | 787 | 9.64e-83 | 283 |
| MS.gene018570.t1 | AT5G37060 | 27.011 | 833 | 523 | 20 | 14 | 816 | 53 | 830 | 1.48e-82 | 283 |
| MS.gene018570.t1 | AT5G58460 | 26.202 | 832 | 529 | 21 | 14 | 816 | 53 | 828 | 2.49e-82 | 283 |
| MS.gene018570.t1 | AT5G22900 | 25.810 | 864 | 535 | 21 | 1 | 820 | 21 | 822 | 1.26e-80 | 277 |
| MS.gene018570.t1 | AT3G44900 | 26.914 | 862 | 518 | 25 | 1 | 817 | 20 | 814 | 5.43e-76 | 264 |
| MS.gene018570.t1 | AT5G01690 | 26.438 | 817 | 514 | 17 | 12 | 815 | 25 | 767 | 7.28e-75 | 260 |
| MS.gene018570.t1 | AT2G28180 | 27.121 | 837 | 520 | 20 | 9 | 818 | 39 | 812 | 2.85e-72 | 254 |
| MS.gene018570.t1 | AT1G79400 | 28.034 | 824 | 508 | 26 | 17 | 816 | 11 | 773 | 1.97e-70 | 248 |
| MS.gene018570.t1 | AT1G08150 | 26.488 | 823 | 509 | 28 | 8 | 801 | 40 | 795 | 2.41e-64 | 231 |
| MS.gene018570.t1 | AT1G16380 | 25.825 | 848 | 498 | 31 | 17 | 816 | 11 | 775 | 2.90e-62 | 225 |
| MS.gene018570.t1 | AT5G22910 | 25.858 | 816 | 485 | 29 | 24 | 800 | 47 | 781 | 3.23e-60 | 219 |
| MS.gene018570.t1 | AT1G08140 | 25.386 | 843 | 518 | 27 | 11 | 816 | 36 | 804 | 8.80e-60 | 218 |
| MS.gene018570.t1 | AT3G52080 | 26.141 | 811 | 511 | 20 | 36 | 816 | 33 | 785 | 2.27e-58 | 214 |
| MS.gene018570.t1 | AT2G28170 | 25.297 | 842 | 533 | 26 | 1 | 817 | 30 | 800 | 2.29e-58 | 214 |
| MS.gene018570.t1 | AT5G01680 | 24.213 | 826 | 551 | 17 | 10 | 823 | 21 | 783 | 1.06e-56 | 209 |
| MS.gene018570.t1 | AT3G44910 | 23.961 | 818 | 511 | 26 | 11 | 800 | 18 | 752 | 1.55e-51 | 194 |
| MS.gene018570.t1 | AT3G44930 | 23.821 | 827 | 525 | 27 | 5 | 800 | 12 | 764 | 7.35e-50 | 189 |
| MS.gene018570.t1 | AT1G08135 | 24.482 | 821 | 525 | 23 | 17 | 817 | 51 | 796 | 5.04e-48 | 184 |
| MS.gene018570.t1 | AT3G44920 | 23.929 | 840 | 532 | 24 | 5 | 812 | 12 | 776 | 3.35e-47 | 181 |
| MS.gene018570.t1 | AT5G51710 | 22.434 | 419 | 274 | 12 | 29 | 435 | 154 | 533 | 9.18e-12 | 68.9 |
| MS.gene018570.t1 | AT5G51710 | 22.637 | 402 | 260 | 12 | 46 | 435 | 171 | 533 | 1.08e-11 | 68.9 |
Find 214 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGGCCTTGGGTCGAAGAATT+TGG | 0.177714 | 7.1:+7048006 | MS.gene018570:CDS |
| TATAACTTTGGTCGGTATTT+TGG | 0.197869 | 7.1:-7048210 | None:intergenic |
| GCTTGTGCTGGGAAGGTTAT+AGG | 0.202999 | 7.1:+7042482 | MS.gene018570:CDS |
| CTAGCGGGTGTAATGGTTTC+AGG | 0.207166 | 7.1:+7042233 | MS.gene018570:CDS |
| AAAACACAATGCATATTCTT+TGG | 0.224822 | 7.1:-7048048 | None:intergenic |
| ATTTGCAATCATGGTACTTA+TGG | 0.235524 | 7.1:+7047331 | MS.gene018570:CDS |
| GGGTCGGTTTCCGTCGATTA+TGG | 0.262230 | 7.1:+7049071 | MS.gene018570:CDS |
| GTAAGGTTCGTTAAGCAAAA+TGG | 0.281124 | 7.1:+7048148 | MS.gene018570:CDS |
| AGAAATATAAACTTCGTTTA+CGG | 0.306223 | 7.1:-7042204 | None:intergenic |
| ATAACTGCATTCCCCGTCTT+AGG | 0.306361 | 7.1:+7041915 | MS.gene018570:CDS |
| ACAATCTCGGCTATGACTTT+AGG | 0.306942 | 7.1:-7041059 | None:intergenic |
| GGCCTTGGGTCGAAGAATTT+GGG | 0.319048 | 7.1:+7048007 | MS.gene018570:CDS |
| GTGGAGGAGGTGATAACATT+AGG | 0.326606 | 7.1:+7049012 | MS.gene018570:CDS |
| GGATTCATAACTGATTTCAT+AGG | 0.331087 | 7.1:+7042254 | MS.gene018570:CDS |
| AAGCCCACTTGTTGCCGTTT+GGG | 0.345730 | 7.1:+7042085 | MS.gene018570:CDS |
| TGGAGGAGGTGATAACATTA+GGG | 0.347823 | 7.1:+7049013 | MS.gene018570:CDS |
| TCGAAGAATTTGGGCTTAGA+TGG | 0.351131 | 7.1:+7048016 | MS.gene018570:CDS |
| GTGGATAGAGGGTATGGCCT+TGG | 0.354346 | 7.1:+7047992 | MS.gene018570:CDS |
| CTTCCTTTCGTCTCCGGCAT+TGG | 0.363650 | 7.1:+7041804 | MS.gene018570:CDS |
| AAACACAATGCATATTCTTT+GGG | 0.364907 | 7.1:-7048047 | None:intergenic |
| TCTAGAGTTGGGAAAGAAAA+TGG | 0.365515 | 7.1:+7048096 | MS.gene018570:CDS |
| AAACTTCCTCCGATGGAATC+TGG | 0.372486 | 7.1:+7040928 | MS.gene018570:CDS |
| TCATCTGACCTCTAGCCAAT+TGG | 0.378132 | 7.1:+7047721 | MS.gene018570:CDS |
| ATCTCACTTCCTTTCGTCTC+CGG | 0.381523 | 7.1:+7041798 | MS.gene018570:CDS |
| TTGATTGAGGTTATGTTAAC+CGG | 0.384254 | 7.1:-7040906 | None:intergenic |
| GCCGTTTGGGTACTTCTCTC+TGG | 0.388063 | 7.1:+7042098 | MS.gene018570:CDS |
| GTAATTTCAGTTGCTTGTGC+TGG | 0.394346 | 7.1:+7042470 | MS.gene018570:CDS |
| CTTGTGCTGGGAAGGTTATA+GGG | 0.394632 | 7.1:+7042483 | MS.gene018570:CDS |
| CTTCCAGCCGCCAATGTTTG+TGG | 0.395185 | 7.1:-7047853 | None:intergenic |
| AAAGCCCACTTGTTGCCGTT+TGG | 0.396855 | 7.1:+7042084 | MS.gene018570:CDS |
| ACCGAGGGAATATACGTTGC+AGG | 0.408063 | 7.1:-7041644 | None:intergenic |
| TTGTTTCTTCCTATAGCTGA+TGG | 0.408606 | 7.1:-7041615 | None:intergenic |
| CATCTGACCTCTAGCCAATT+GGG | 0.413601 | 7.1:+7047722 | MS.gene018570:CDS |
| AGAGCTGAACATGCAGAGTT+AGG | 0.414940 | 7.1:+7049114 | MS.gene018570:CDS |
| TCTAGAGCCTCGCGATCGTC+AGG | 0.421711 | 7.1:-7048079 | None:intergenic |
| GGATGTTAAAATGTCTCCTA+TGG | 0.422501 | 7.1:-7049139 | None:intergenic |
| AGTGGATAGGTGTGAACAAA+AGG | 0.426668 | 7.1:+7047933 | MS.gene018570:CDS |
| GATTAGTGGTGGAAAAGCTT+GGG | 0.426834 | 7.1:+7042433 | MS.gene018570:CDS |
| TGGATAGAGGGTATGGCCTT+GGG | 0.427895 | 7.1:+7047993 | MS.gene018570:CDS |
| TGACGAAATATTTGCAATCA+TGG | 0.428782 | 7.1:+7047322 | MS.gene018570:CDS |
| TAAGGTTCGTTAAGCAAAAT+GGG | 0.429831 | 7.1:+7048149 | MS.gene018570:CDS |
| GCCTAGCTTGCGAATTGTCT+TGG | 0.430427 | 7.1:-7047423 | None:intergenic |
| GGACTATAACCTTACCCAAT+TGG | 0.435071 | 7.1:-7047736 | None:intergenic |
| ATTGCAGGAGTTGGATGAAA+AGG | 0.435105 | 7.1:+7048921 | MS.gene018570:intron |
| GAATGGCATAACCGTATTGT+TGG | 0.437995 | 7.1:+7047692 | MS.gene018570:CDS |
| GAGGTTTGAAGAGGAAAGCT+AGG | 0.439591 | 7.1:-7041028 | None:intergenic |
| GATTATGATCTCATAGTTGT+TGG | 0.440225 | 7.1:+7049045 | MS.gene018570:CDS |
| AACTAGGAATGTGCTGAATC+CGG | 0.440353 | 7.1:-7041871 | None:intergenic |
| GGCTTTGTCTGCTCCGTCGA+TGG | 0.442484 | 7.1:-7041850 | None:intergenic |
| AATGTTGCAGAGGTTTCATC+TGG | 0.442709 | 7.1:+7049264 | MS.gene018570:CDS |
| CTGTTGCAGTGACCGTTGTA+AGG | 0.444376 | 7.1:+7048131 | MS.gene018570:CDS |
| GCCATTCTTCACGATTGAAC+CGG | 0.446177 | 7.1:-7047676 | None:intergenic |
| TCAATGAGGTTGATGATAGA+TGG | 0.446239 | 7.1:-7047527 | None:intergenic |
| CGACTGAGAAGCTATAACTT+TGG | 0.446493 | 7.1:-7048222 | None:intergenic |
| GTGCTTGTGGATAGAGGGTA+TGG | 0.447224 | 7.1:+7047986 | MS.gene018570:CDS |
| CGAATCCTTGCTTGCATCCA+CGG | 0.447450 | 7.1:+7047491 | MS.gene018570:CDS |
| GATCGCGAGGCTCTAGAGTT+GGG | 0.448022 | 7.1:+7048085 | MS.gene018570:CDS |
| AATGAGTTCAACGAGTCCTT+TGG | 0.451221 | 7.1:-7042576 | None:intergenic |
| GTGGGTGTGCTTGTGGATAG+AGG | 0.452134 | 7.1:+7047980 | MS.gene018570:CDS |
| AAGATATTGCCGTAGTGGAC+TGG | 0.452334 | 7.1:-7047757 | None:intergenic |
| AAAGAAAATGGCTGAACATC+CGG | 0.454095 | 7.1:+7048108 | MS.gene018570:CDS |
| CGATTGAACCGGTTGAAGAA+AGG | 0.456626 | 7.1:-7047665 | None:intergenic |
| TGGGTACTTCTCTCTGGCGC+TGG | 0.460015 | 7.1:+7042104 | MS.gene018570:CDS |
| AGATTAGTGGTGGAAAAGCT+TGG | 0.461197 | 7.1:+7042432 | MS.gene018570:CDS |
| TTGCTCTGTGGGTGTGCTTG+TGG | 0.463322 | 7.1:+7047973 | MS.gene018570:CDS |
| GCTTTAGCAATCGCGTTAGC+CGG | 0.472324 | 7.1:+7042035 | MS.gene018570:CDS |
| AGTGTAATTGATTCTCTAGC+TGG | 0.473668 | 7.1:-7042536 | None:intergenic |
| ATTATGATCTCATAGTTGTT+GGG | 0.473822 | 7.1:+7049046 | MS.gene018570:CDS |
| AATGGCATAACCGTATTGTT+GGG | 0.475293 | 7.1:+7047693 | MS.gene018570:CDS |
| CGGCTATGACTTTAGGTTGA+CGG | 0.475995 | 7.1:-7041052 | None:intergenic |
| TTGTAGATTGCCATTACTAG+TGG | 0.481587 | 7.1:-7047380 | None:intergenic |
| GCGAGGATTCGTCCTAAGAC+GGG | 0.485385 | 7.1:-7041927 | None:intergenic |
| ACAAGCACACCCACAGAGCA+AGG | 0.488232 | 7.1:-7047971 | None:intergenic |
| TATATTTCTTTAACCCTAGC+GGG | 0.489080 | 7.1:+7042218 | MS.gene018570:CDS |
| TTCAGTTGCTTGTGCTGGGA+AGG | 0.492336 | 7.1:+7042475 | MS.gene018570:CDS |
| AACAACAGCGACGCCAATGC+CGG | 0.494043 | 7.1:-7041817 | None:intergenic |
| CATGCAGTGTCGGAGAATGC+TGG | 0.494770 | 7.1:+7047905 | MS.gene018570:CDS |
| CTAAACTCAATTCGCCGTAC+CGG | 0.499475 | 7.1:+7041744 | MS.gene018570:CDS |
| TTTAACCCTAGCGGGTGTAA+TGG | 0.499847 | 7.1:+7042226 | MS.gene018570:CDS |
| TACTAGTGGGGTTGTGATGA+AGG | 0.500111 | 7.1:-7047366 | None:intergenic |
| TGTAGATTGCCATTACTAGT+GGG | 0.500399 | 7.1:-7047379 | None:intergenic |
| GCTGCATGATGAAGAGTTTG+AGG | 0.503536 | 7.1:-7047577 | None:intergenic |
| GAAGTTGATAGAGAGAATTG+AGG | 0.504020 | 7.1:+7042343 | MS.gene018570:CDS |
| GACCATCTTGCTTCCTGTTG+AGG | 0.504129 | 7.1:-7049160 | None:intergenic |
| CATCACAACCCCACTAGTAA+TGG | 0.506614 | 7.1:+7047370 | MS.gene018570:CDS |
| TTGGTTGTGATGCCACGAGC+TGG | 0.507153 | 7.1:-7047404 | None:intergenic |
| GATTCATAACTGATTTCATA+GGG | 0.509984 | 7.1:+7042255 | MS.gene018570:CDS |
| AATGAACAGACAAATAGAAC+AGG | 0.510887 | 7.1:+7048249 | MS.gene018570:CDS |
| GACCTCTAGCCAATTGGGTA+AGG | 0.512856 | 7.1:+7047727 | MS.gene018570:CDS |
| CTTGCGACGGATTCCAGCGT+TGG | 0.513135 | 7.1:-7041675 | None:intergenic |
| GTTGATGATAGATGGAATGT+TGG | 0.513785 | 7.1:-7047519 | None:intergenic |
| CGATCGCGAGGCTCTAGAGT+TGG | 0.514013 | 7.1:+7048084 | MS.gene018570:CDS |
| TACCCTTCCACAAACATTGG+CGG | 0.517678 | 7.1:+7047846 | MS.gene018570:CDS |
| CAACATTGGAAAAGAGAAAA+CGG | 0.518846 | 7.1:+7042604 | MS.gene018570:CDS |
| ACGTTCATCTTCCATCATCA+TGG | 0.521585 | 7.1:+7047616 | MS.gene018570:CDS |
| ACTCTAGTCCCACAAGAAAG+AGG | 0.521625 | 7.1:-7041716 | None:intergenic |
| CCACTCGATGCAAAATAAAG+TGG | 0.522045 | 7.1:-7042389 | None:intergenic |
| ACCGGTTCAATCGTGAAGAA+TGG | 0.523081 | 7.1:+7047675 | MS.gene018570:CDS |
| ACGCCAATGCCGGAGACGAA+AGG | 0.526249 | 7.1:-7041807 | None:intergenic |
| TGAGGTTATGTTAACCGGCA+TGG | 0.526941 | 7.1:-7040901 | None:intergenic |
| TCGGTGGAGCATGCCAACGC+TGG | 0.527652 | 7.1:+7041662 | MS.gene018570:CDS |
| TGAGCCACACGCTTCATCAC+GGG | 0.530020 | 7.1:-7042158 | None:intergenic |
| TGGTGGCAACATTGTGGAGG+AGG | 0.531388 | 7.1:+7048999 | MS.gene018570:CDS |
| TAATTTCAGTTGCTTGTGCT+GGG | 0.533973 | 7.1:+7042471 | MS.gene018570:CDS |
| CAGCCGCCAATGTTTGTGGA+AGG | 0.534361 | 7.1:-7047849 | None:intergenic |
| ACAGTGAAGTATATTGAGAA+GGG | 0.536313 | 7.1:+7048976 | MS.gene018570:CDS |
| GAACTCATTGTACTCAACAT+TGG | 0.538927 | 7.1:+7042590 | MS.gene018570:CDS |
| AACAGTGAAGTATATTGAGA+AGG | 0.538998 | 7.1:+7048975 | MS.gene018570:CDS |
| CAGCATTCTCCGACACTGCA+TGG | 0.539157 | 7.1:-7047904 | None:intergenic |
| AAGAATGCTCCTTGCTCTGT+GGG | 0.541846 | 7.1:+7047962 | MS.gene018570:CDS |
| GTTGACGGAGAGGTTTGAAG+AGG | 0.543029 | 7.1:-7041037 | None:intergenic |
| GATGAAAAGCCCCAACAATA+CGG | 0.545639 | 7.1:-7047703 | None:intergenic |
| CTGGAATCCGTCGCAAGCAT+AGG | 0.546538 | 7.1:+7041681 | MS.gene018570:CDS |
| AGCGAGGATTCGTCCTAAGA+CGG | 0.549808 | 7.1:-7041928 | None:intergenic |
| TTGAACCGTGGATGCAAGCA+AGG | 0.551323 | 7.1:-7047496 | None:intergenic |
| TGATCTCATAGTTGTTGGGA+AGG | 0.552228 | 7.1:+7049050 | MS.gene018570:CDS |
| GTTGGATGAAAAGGCAATGG+AGG | 0.552444 | 7.1:+7048930 | MS.gene018570:CDS |
| AGCGCGATGAACCATGATGA+TGG | 0.557522 | 7.1:-7047627 | None:intergenic |
| ACTGATGTGACTAAGATTAG+TGG | 0.558539 | 7.1:+7042419 | MS.gene018570:CDS |
| AAGTATATTGAGAAGGGTGG+TGG | 0.558637 | 7.1:+7048982 | MS.gene018570:CDS |
| TGGGTGTGCTTGTGGATAGA+GGG | 0.559960 | 7.1:+7047981 | MS.gene018570:CDS |
| TATTACCCTTCCACAAACAT+TGG | 0.562447 | 7.1:+7047843 | MS.gene018570:CDS |
| TCATAGTTGTTGGGAAGGGT+CGG | 0.562457 | 7.1:+7049055 | MS.gene018570:CDS |
| ACCTGCAACGTATATTCCCT+CGG | 0.562951 | 7.1:+7041643 | MS.gene018570:CDS |
| GTTAAGCAAAATGGGATGAT+CGG | 0.563847 | 7.1:+7048157 | MS.gene018570:CDS |
| CTAAGGTGGTTTGAATAATG+AGG | 0.564144 | 7.1:-7040986 | None:intergenic |
| TCAATCAAAACTTCCTCCGA+TGG | 0.565083 | 7.1:+7040921 | MS.gene018570:CDS |
| ACCAAGACAATTCGCAAGCT+AGG | 0.566811 | 7.1:+7047422 | MS.gene018570:CDS |
| GATGTTAAAATGTCTCCTAT+GGG | 0.567000 | 7.1:-7049138 | None:intergenic |
| ACAACGGTCACTGCAACAGC+CGG | 0.568380 | 7.1:-7048127 | None:intergenic |
| CTTCCACAAACATTGGCGGC+TGG | 0.568610 | 7.1:+7047850 | MS.gene018570:CDS |
| GTAGATTGCCATTACTAGTG+GGG | 0.570753 | 7.1:-7047378 | None:intergenic |
| AAGGATTCGTAGCTCATCTA+CGG | 0.572758 | 7.1:-7047477 | None:intergenic |
| TTCTCTTTCCACAATGCATG+AGG | 0.573921 | 7.1:+7047778 | MS.gene018570:CDS |
| CATGCAGAGTTAGGTCCCAT+AGG | 0.574828 | 7.1:+7049123 | MS.gene018570:CDS |
| AGCCGCCAATGTTTGTGGAA+GGG | 0.575299 | 7.1:-7047848 | None:intergenic |
| TTGTTGTTGCTATGATGTGG+AGG | 0.576861 | 7.1:+7042510 | MS.gene018570:CDS |
| ATCGCCTTGCCAGATTCCAT+CGG | 0.577893 | 7.1:-7040937 | None:intergenic |
| GCCAGAGAGAAGTACCCAAA+CGG | 0.578104 | 7.1:-7042099 | None:intergenic |
| TCCTCCGATGGAATCTGGCA+AGG | 0.579692 | 7.1:+7040933 | MS.gene018570:CDS |
| AGCCCAAATTCTTCGACCCA+AGG | 0.579740 | 7.1:-7048009 | None:intergenic |
| GTGAAGTATATTGAGAAGGG+TGG | 0.580487 | 7.1:+7048979 | MS.gene018570:CDS |
| GAGAGGGAAAGCGAAATCGA+GGG | 0.581207 | 7.1:-7040964 | None:intergenic |
| GGAGTTGGATGAAAAGGCAA+TGG | 0.581954 | 7.1:+7048927 | MS.gene018570:intron |
| CATGCAGCTTGTTGAGCTCA+CGG | 0.583649 | 7.1:+7047592 | MS.gene018570:CDS |
| GCATTCAGTATAGCAGCTTG+TGG | 0.585968 | 7.1:+7041774 | MS.gene018570:CDS |
| TGGTTTGAATAATGAGGAGA+GGG | 0.596970 | 7.1:-7040980 | None:intergenic |
| TTGAGCCACACGCTTCATCA+CGG | 0.597494 | 7.1:-7042159 | None:intergenic |
| AGGTTTGAAGAGGAAAGCTA+GGG | 0.598859 | 7.1:-7041027 | None:intergenic |
| GCTAGAGAATCAATTACACT+TGG | 0.599662 | 7.1:+7042539 | MS.gene018570:CDS |
| GGAGAGGGAAAGCGAAATCG+AGG | 0.599735 | 7.1:-7040965 | None:intergenic |
| GTGGATAGGTGTGAACAAAA+GGG | 0.600503 | 7.1:+7047934 | MS.gene018570:CDS |
| TGAAACCATTACACCCGCTA+GGG | 0.600504 | 7.1:-7042231 | None:intergenic |
| TAGGGTACATACAACAATCT+CGG | 0.600988 | 7.1:-7041072 | None:intergenic |
| TGGTGGACCTGACGATCGCG+AGG | 0.602058 | 7.1:+7048072 | MS.gene018570:CDS |
| TGAAGAGGAAAGCTAGGGAG+CGG | 0.602562 | 7.1:-7041022 | None:intergenic |
| ATGGCATAACCGTATTGTTG+GGG | 0.602645 | 7.1:+7047694 | MS.gene018570:CDS |
| CTGAAACCATTACACCCGCT+AGG | 0.604315 | 7.1:-7042232 | None:intergenic |
| ATCGACGGAGCAGACAAAGC+CGG | 0.604740 | 7.1:+7041852 | MS.gene018570:CDS |
| GCATGATGAAGAGTTTGAGG+AGG | 0.606679 | 7.1:-7047574 | None:intergenic |
| GCGTTGGCATGCTCCACCGA+GGG | 0.608945 | 7.1:-7041659 | None:intergenic |
| GCGGCTAACGACGAGCACTA+AGG | 0.609272 | 7.1:-7041003 | None:intergenic |
| AGTACCCAAACGGCAACAAG+TGG | 0.610548 | 7.1:-7042089 | None:intergenic |
| AAGAGAAGATATTGCCGTAG+TGG | 0.611985 | 7.1:-7047762 | None:intergenic |
| TGAGAAGCTATAACTTTGGT+CGG | 0.613013 | 7.1:-7048218 | None:intergenic |
| ATCCTCAACAGGAAGCAAGA+TGG | 0.613824 | 7.1:+7049158 | MS.gene018570:CDS |
| ATTAGTGGTGGAAAAGCTTG+GGG | 0.615927 | 7.1:+7042434 | MS.gene018570:CDS |
| TCGGTTTCCGTCGATTATGG+TGG | 0.617439 | 7.1:+7049074 | MS.gene018570:CDS |
| GAAGGGTGGTGGCAACATTG+TGG | 0.620112 | 7.1:+7048993 | MS.gene018570:CDS |
| GGTTATAGTCCAGTCCACTA+CGG | 0.621273 | 7.1:+7047748 | MS.gene018570:CDS |
| TGCACCGATGTACACGGTCA+AGG | 0.621391 | 7.1:+7049230 | MS.gene018570:CDS |
| TGCACCTTGACCGTGTACAT+CGG | 0.621452 | 7.1:-7049234 | None:intergenic |
| CAATGAGTTCCATGCAGTGT+CGG | 0.622584 | 7.1:+7047895 | MS.gene018570:CDS |
| ACGCGTAGGCGAAACTGCAA+TGG | 0.624208 | 7.1:+7041971 | MS.gene018570:CDS |
| AACCTTACCCAATTGGCTAG+AGG | 0.625874 | 7.1:-7047729 | None:intergenic |
| AAAGAATGCTCCTTGCTCTG+TGG | 0.627753 | 7.1:+7047961 | MS.gene018570:CDS |
| GATCTCATAGTTGTTGGGAA+GGG | 0.628242 | 7.1:+7049051 | MS.gene018570:CDS |
| GTGGTTTGAATAATGAGGAG+AGG | 0.628407 | 7.1:-7040981 | None:intergenic |
| TAGAAGACCTATGCTTGCGA+CGG | 0.631114 | 7.1:-7041688 | None:intergenic |
| CGGAGAATGCTGGAAATGAG+TGG | 0.631644 | 7.1:+7047915 | MS.gene018570:CDS |
| GGGTGGTGGCAACATTGTGG+AGG | 0.632253 | 7.1:+7048996 | MS.gene018570:CDS |
| TTATATTTCTTTAACCCTAG+CGG | 0.632281 | 7.1:+7042217 | MS.gene018570:CDS |
| GGAGGAGGTGATAACATTAG+GGG | 0.634008 | 7.1:+7049014 | MS.gene018570:CDS |
| GCATATATCCTCATGCATTG+TGG | 0.634054 | 7.1:-7047786 | None:intergenic |
| GCAATCTACAAACCAGCTCG+TGG | 0.634509 | 7.1:+7047392 | MS.gene018570:CDS |
| CATGATGAAGAGTTTGAGGA+GGG | 0.638126 | 7.1:-7047573 | None:intergenic |
| ATGACTTTAGGTTGACGGAG+AGG | 0.639950 | 7.1:-7041047 | None:intergenic |
| CGAGGATTCGTCCTAAGACG+GGG | 0.644403 | 7.1:-7041926 | None:intergenic |
| AAACTTCTCACAACACGCGT+AGG | 0.645236 | 7.1:+7041957 | MS.gene018570:CDS |
| AGTTCTGCCACCATAATCGA+CGG | 0.645279 | 7.1:-7049081 | None:intergenic |
| GCTAACGACGAGCACTAAGG+TGG | 0.648906 | 7.1:-7041000 | None:intergenic |
| AATGCTGGAAATGAGTGGAT+AGG | 0.649241 | 7.1:+7047920 | MS.gene018570:CDS |
| GCCTTGCCAGATTCCATCGG+AGG | 0.649802 | 7.1:-7040934 | None:intergenic |
| AGAGGGAAAGCGAAATCGAG+GGG | 0.652345 | 7.1:-7040963 | None:intergenic |
| AGAAGATGCACCGATGTACA+CGG | 0.653659 | 7.1:+7049224 | MS.gene018570:CDS |
| GGAGTACTCATGAACACCAA+AGG | 0.657099 | 7.1:+7042560 | MS.gene018570:CDS |
| TTGCTTAACGAACCTTACAA+CGG | 0.660135 | 7.1:-7048143 | None:intergenic |
| TAGTGGGGTTGTGATGAAGG+TGG | 0.664951 | 7.1:-7047363 | None:intergenic |
| TGCTACGAGTTGATTCAATG+AGG | 0.672348 | 7.1:-7047541 | None:intergenic |
| GATGTGACTAAGATTAGTGG+TGG | 0.677453 | 7.1:+7042422 | MS.gene018570:CDS |
| GAGGAGTTTCAAAGCAAGTG+TGG | 0.680710 | 7.1:+7048949 | MS.gene018570:CDS |
| AGCGTTGGCATGCTCCACCG+AGG | 0.690287 | 7.1:-7041660 | None:intergenic |
| TGTGGCTCAAAGATGCTCAG+TGG | 0.694001 | 7.1:+7042172 | MS.gene018570:CDS |
| AAGTCCCGTGATGAAGCGTG+TGG | 0.695219 | 7.1:+7042154 | MS.gene018570:CDS |
| GCATGATGAGAATGTTGCAG+AGG | 0.695544 | 7.1:+7049254 | MS.gene018570:CDS |
| GTACCCAAACGGCAACAAGT+GGG | 0.697675 | 7.1:-7042088 | None:intergenic |
| TTAGTGGTGGAAAAGCTTGG+GGG | 0.711879 | 7.1:+7042435 | MS.gene018570:CDS |
| GCCGGAAAAGAATCCGACGA+CGG | 0.712194 | 7.1:+7042053 | MS.gene018570:CDS |
| TGAGAAGTTTGAGTTCAGCG+AGG | 0.717015 | 7.1:-7041944 | None:intergenic |
| CATTCGACGACTTAACCGCG+TGG | 0.724943 | 7.1:+7042003 | MS.gene018570:CDS |
| ATGGAATGTTGGTTGAACCG+TGG | 0.725204 | 7.1:-7047508 | None:intergenic |
| TGCAACGTATATTCCCTCGG+TGG | 0.733213 | 7.1:+7041646 | MS.gene018570:CDS |
| TGGTGGCAGAACTAGCAGAG+AGG | 0.738029 | 7.1:+7049091 | MS.gene018570:CDS |
| TAAAGCGAGAAGAATCCACG+CGG | 0.866386 | 7.1:-7042018 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.1 | gene | 7040903 | 7049320 | 7040903 | ID=MS.gene018570 |
| chr7.1 | mRNA | 7040903 | 7049320 | 7040903 | ID=MS.gene018570.t1;Parent=MS.gene018570 |
| chr7.1 | exon | 7040903 | 7041082 | 7040903 | ID=MS.gene018570.t1.exon1;Parent=MS.gene018570.t1 |
| chr7.1 | CDS | 7040903 | 7041082 | 7040903 | ID=cds.MS.gene018570.t1;Parent=MS.gene018570.t1 |
| chr7.1 | exon | 7041597 | 7042625 | 7041597 | ID=MS.gene018570.t1.exon2;Parent=MS.gene018570.t1 |
| chr7.1 | CDS | 7041597 | 7042625 | 7041597 | ID=cds.MS.gene018570.t1;Parent=MS.gene018570.t1 |
| chr7.1 | exon | 7047314 | 7048270 | 7047314 | ID=MS.gene018570.t1.exon3;Parent=MS.gene018570.t1 |
| chr7.1 | CDS | 7047314 | 7048270 | 7047314 | ID=cds.MS.gene018570.t1;Parent=MS.gene018570.t1 |
| chr7.1 | exon | 7048928 | 7049320 | 7048928 | ID=MS.gene018570.t1.exon4;Parent=MS.gene018570.t1 |
| chr7.1 | CDS | 7048928 | 7049320 | 7048928 | ID=cds.MS.gene018570.t1;Parent=MS.gene018570.t1 |
| Gene Sequence |
| Protein sequence |