AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene061890

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene061890.t1 MTR_7g099800 97.415 851 22 0 1 851 1 851 0.0 1698
MS.gene061890.t1 MTR_7g099750 79.725 873 126 6 1 851 1 844 0.0 1317
MS.gene061890.t1 MTR_7g099820 59.371 827 286 14 9 823 5 793 0.0 904
MS.gene061890.t1 MTR_7g099820 61.379 725 234 11 9 724 5 692 0.0 823
MS.gene061890.t1 MTR_5g009770 50.737 814 344 15 8 815 15 777 0.0 756
MS.gene061890.t1 MTR_5g009780 50.555 811 352 17 8 815 15 779 0.0 743
MS.gene061890.t1 MTR_4g123583 51.397 823 339 20 8 816 12 787 0.0 734
MS.gene061890.t1 MTR_4g078120 49.767 858 345 20 8 831 12 817 0.0 730
MS.gene061890.t1 MTR_5g009800 48.212 811 350 18 8 815 15 758 0.0 698
MS.gene061890.t1 MTR_8g093780 43.925 856 415 19 11 849 20 827 0.0 663
MS.gene061890.t1 MTR_3g096380 44.883 811 400 20 11 815 21 790 0.0 643
MS.gene061890.t1 MTR_5g009770 48.921 695 298 15 127 815 3 646 0.0 599
MS.gene061890.t1 MTR_2g011520 40.467 813 427 16 10 815 2 764 0.0 587
MS.gene061890.t1 MTR_3g031170 33.456 816 460 20 11 815 36 779 4.08e-131 411
MS.gene061890.t1 MTR_1g043400 32.818 841 509 22 10 838 10 806 4.05e-129 406
MS.gene061890.t1 MTR_1g045870 32.455 835 493 22 10 833 10 784 2.42e-123 391
MS.gene061890.t1 MTR_2g040100 32.164 827 484 23 15 815 35 810 5.42e-123 391
MS.gene061890.t1 MTR_3g037270 30.873 813 503 16 15 815 24 789 7.56e-118 377
MS.gene061890.t1 MTR_5g067690 30.366 820 507 17 11 815 22 792 1.44e-113 365
MS.gene061890.t1 MTR_0002s1180 30.637 816 510 15 11 815 16 786 1.87e-113 365
MS.gene061890.t1 MTR_3g037260 29.534 816 512 16 15 815 20 787 6.16e-109 353
MS.gene061890.t1 MTR_3g071990 29.506 810 504 21 14 818 22 769 6.30e-105 343
MS.gene061890.t1 MTR_5g074340 28.876 845 533 21 11 843 30 818 1.72e-104 342
MS.gene061890.t1 MTR_5g074380 29.048 809 512 16 12 815 76 827 1.83e-102 337
MS.gene061890.t1 MTR_5g074360 28.677 809 515 19 12 815 31 782 1.21e-101 334
MS.gene061890.t1 MTR_3g071880 28.416 827 511 21 12 813 20 790 2.05e-99 328
MS.gene061890.t1 MTR_3g071870 28.446 798 518 20 12 800 33 786 5.32e-95 316
MS.gene061890.t1 MTR_7g085870 29.242 831 503 20 9 814 24 794 2.40e-92 309
MS.gene061890.t1 MTR_3g071990 29.467 750 450 21 80 818 6 687 7.72e-91 303
MS.gene061890.t1 MTR_5g074320 28.536 799 491 22 61 842 10 745 1.06e-89 300
MS.gene061890.t1 MTR_3g031160 27.396 814 516 19 11 815 31 778 9.35e-86 290
MS.gene061890.t1 MTR_3g498715 26.270 807 507 19 12 800 43 779 9.86e-86 290
MS.gene061890.t1 MTR_6g053320 27.201 761 476 22 76 819 71 770 2.00e-84 286
MS.gene061890.t1 MTR_6g015940 26.265 830 508 20 12 815 35 786 7.05e-81 277
MS.gene061890.t1 MTR_5g088470 25.092 817 539 19 12 815 33 789 2.41e-80 276
MS.gene061890.t1 MTR_8g085260 26.055 829 513 18 12 815 37 790 6.30e-79 272
MS.gene061890.t1 MTR_4g029520 25.988 835 537 26 5 815 1 778 1.49e-78 271
MS.gene061890.t1 MTR_5g088430 25.123 816 540 18 12 815 33 789 8.29e-78 269
MS.gene061890.t1 MTR_3g110700 27.543 806 529 25 20 815 15 775 2.22e-77 267
MS.gene061890.t1 MTR_5g088450 25.728 824 528 23 12 815 33 792 5.11e-77 267
MS.gene061890.t1 MTR_3g083850 25.426 822 526 21 12 815 33 785 7.11e-77 266
MS.gene061890.t1 MTR_4g037755 26.515 792 505 22 43 815 36 769 2.67e-74 259
MS.gene061890.t1 MTR_5g088840 25.514 827 539 23 9 815 47 816 1.42e-73 258
MS.gene061890.t1 MTR_7g053000 24.939 826 544 17 9 815 47 815 3.86e-73 256
MS.gene061890.t1 MTR_7g052680 25.030 831 537 22 9 815 47 815 6.47e-73 256
MS.gene061890.t1 MTR_5g088790 24.818 822 550 15 9 815 47 815 1.19e-72 255
MS.gene061890.t1 MTR_7g052970 24.939 826 544 17 9 815 47 815 1.26e-72 255
MS.gene061890.t1 MTR_3g031030 25.373 804 513 20 34 815 27 765 1.23e-70 249
MS.gene061890.t1 MTR_3g465680 31.313 396 257 6 13 404 44 428 1.04e-50 192
MS.gene061890.t1 MTR_3g465680 27.934 426 230 17 403 815 555 916 1.71e-30 129
MS.gene061890.t1 MTR_7g052895 23.092 524 376 7 9 518 47 557 8.70e-42 164
MS.gene061890.t1 MTR_5g083560 29.738 343 195 12 479 817 1 301 2.29e-28 117
MS.gene061890.t1 MTR_5g061460 50.000 98 47 2 465 561 15 111 1.04e-22 96.3
MS.gene061890.t1 MTR_1g082340 50.000 98 47 2 465 561 82 178 4.61e-22 96.7
MS.gene061890.t1 MTR_3g083860 25.943 212 116 7 12 217 33 209 1.64e-12 68.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene061890.t1 AT3G53720 67.342 839 252 9 1 828 1 828 0.0 1050
MS.gene061890.t1 AT3G53720 66.144 765 237 9 75 828 2 755 0.0 925
MS.gene061890.t1 AT4G23700 48.910 826 362 14 8 815 12 795 0.0 751
MS.gene061890.t1 AT4G23700 48.910 826 362 14 8 815 12 795 0.0 751
MS.gene061890.t1 AT5G41610 51.843 814 347 13 8 816 13 786 0.0 746
MS.gene061890.t1 AT5G41610 51.843 814 347 13 8 816 13 786 0.0 746
MS.gene061890.t1 AT3G17630 50.478 836 357 13 8 839 14 796 0.0 733
MS.gene061890.t1 AT3G17630 50.478 836 357 13 8 839 14 796 0.0 733
MS.gene061890.t1 AT1G64170 47.625 821 380 14 2 815 15 792 0.0 694
MS.gene061890.t1 AT5G41610 51.451 758 323 13 64 816 1 718 0.0 670
MS.gene061890.t1 AT2G13620 45.509 835 402 19 11 835 22 813 0.0 652
MS.gene061890.t1 AT1G05580 33.540 808 480 18 16 815 41 799 8.27e-125 397
MS.gene061890.t1 AT2G31910 33.983 821 475 24 17 823 28 795 1.30e-119 382
MS.gene061890.t1 AT1G05580 34.150 735 427 18 89 815 3 688 3.01e-112 360
MS.gene061890.t1 AT2G31910 34.051 743 425 22 89 818 3 693 8.33e-106 343
MS.gene061890.t1 AT2G31910 34.051 743 425 22 89 818 3 693 8.33e-106 343
MS.gene061890.t1 AT1G06970 27.485 815 519 15 11 816 35 786 8.42e-98 324
MS.gene061890.t1 AT2G30240 26.871 815 521 16 11 815 37 786 8.93e-88 297
MS.gene061890.t1 AT5G37060 27.677 831 519 21 14 815 53 830 3.67e-87 296
MS.gene061890.t1 AT5G22900 25.788 857 543 24 1 819 21 822 2.17e-82 282
MS.gene061890.t1 AT5G58460 26.562 832 525 22 14 815 53 828 6.42e-82 281
MS.gene061890.t1 AT3G44900 26.533 848 538 20 1 816 20 814 8.46e-76 264
MS.gene061890.t1 AT2G28180 27.639 843 502 21 9 815 39 809 2.40e-75 262
MS.gene061890.t1 AT5G01690 26.387 811 521 19 12 814 25 767 2.58e-70 248
MS.gene061890.t1 AT1G79400 27.139 818 522 24 17 815 11 773 1.15e-69 246
MS.gene061890.t1 AT1G08140 26.596 846 503 28 11 815 36 804 1.47e-67 241
MS.gene061890.t1 AT1G08150 25.511 831 506 23 8 800 40 795 7.56e-65 233
MS.gene061890.t1 AT3G52080 26.947 809 522 22 28 815 25 785 2.14e-64 231
MS.gene061890.t1 AT5G22910 25.094 797 514 24 24 799 47 781 5.47e-64 230
MS.gene061890.t1 AT1G16380 25.787 826 525 26 17 815 11 775 6.14e-64 230
MS.gene061890.t1 AT2G28170 25.864 839 531 25 1 816 30 800 6.87e-63 227
MS.gene061890.t1 AT5G01680 25.091 825 544 15 10 822 21 783 5.74e-61 221
MS.gene061890.t1 AT3G44910 24.722 809 515 21 11 799 18 752 1.25e-57 211
MS.gene061890.t1 AT3G44930 24.970 825 517 25 5 799 12 764 2.35e-56 208
MS.gene061890.t1 AT3G44920 25.150 835 527 21 5 811 12 776 3.80e-54 201
MS.gene061890.t1 AT1G08135 24.969 817 525 20 17 816 51 796 1.56e-51 194
MS.gene061890.t1 AT5G51710 23.349 424 270 12 29 438 154 536 4.00e-16 83.2
MS.gene061890.t1 AT5G51710 23.349 424 270 12 29 438 154 536 4.19e-16 82.8
MS.gene061890.t1 AT5G11800 25.796 314 199 7 29 337 177 461 1.51e-11 68.6

Find 215 sgRNAs with CRISPR-Local

Find 380 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGGGCTTGGGTTGAAGAATT+TGG 0.141201 7.2:-12155920 MS.gene061890:CDS
CTAGCGGGTGTAATGGTTTC+AGG 0.168131 7.2:-12159478 MS.gene061890:CDS
ATTTGCCATCTTGGTCCTTA+TGG 0.216764 7.2:-12156592 MS.gene061890:CDS
AAAACACGATGCATATTCTT+TGG 0.249336 7.2:+12155878 None:intergenic
TTGTAGATTGCCATCACTAC+TGG 0.258012 7.2:+12156543 None:intergenic
TCCGCAAAATTACCTGTCTT+TGG 0.270677 7.2:+12159391 None:intergenic
GTGCTTGTAGATAGAGGATA+TGG 0.294299 7.2:-12155940 MS.gene061890:CDS
ACGATCTCAGCGATGACTTT+AGG 0.298331 7.2:+12160522 None:intergenic
TCTTGAGTTGGGGAAGAAAA+TGG 0.312260 7.2:-12155830 MS.gene061890:CDS
TCCGCCGTCGGCTCCGTTTC+CGG 0.313061 7.2:+12159657 None:intergenic
TGATGAAATATTTGCCATCT+TGG 0.315440 7.2:-12156601 MS.gene061890:CDS
GGGCTTGGGTTGAAGAATTT+GGG 0.325674 7.2:-12155919 MS.gene061890:CDS
TGCTTGTGCTGGGAAGATTC+TGG 0.326856 7.2:-12159230 MS.gene061890:CDS
TAACATCGGAAAAGAGAAAA+AGG 0.330697 7.2:-12159107 MS.gene061890:intron
ACCATTCATCGCGGTTGAAC+CGG 0.335898 7.2:+12156244 None:intergenic
CTCAATGAGGTTGATGATAG+AGG 0.337738 7.2:+12156392 None:intergenic
TGCACCGTATATTTCCTAAA+TGG 0.343077 7.2:-12160065 MS.gene061890:CDS
GAATGGTATAACCGCCTTGC+TGG 0.346889 7.2:-12156228 MS.gene061890:CDS
TTGATTGAGGTTATGTTTAC+CGG 0.350294 7.2:+12160675 None:intergenic
GAGTCCTCTCGTTTCCGTTT+GGG 0.355568 7.2:-12159626 MS.gene061890:CDS
GTGATTGCAACTGCTTGTGC+TGG 0.356434 7.2:-12159241 MS.gene061890:CDS
CGCTGTAAGTATATCTCCTA+TGG 0.362889 7.2:+12155187 None:intergenic
GAGCATTCTTTAGTACCCTT+TGG 0.367291 7.2:+12155977 None:intergenic
AAACTTCCTCCGATGGAATC+TGG 0.372486 7.2:-12160653 MS.gene061890:CDS
GGGTCGGTTTCCGTCGACTA+TGG 0.382041 7.2:-12155255 MS.gene061890:CDS
GAAGCAGAGCATGCAGAGTT+AGG 0.385493 7.2:-12155212 MS.gene061890:CDS
GGATTCATAACAGATTTCAT+AGG 0.387270 7.2:-12159457 MS.gene061890:CDS
TCCGTTTGGGTGCTCCTCTC+CGG 0.390053 7.2:-12159613 MS.gene061890:CDS
CTTCCATCCTCCAATGTTTG+TGG 0.400671 7.2:+12156070 None:intergenic
TACTCCATTTAGGAAATATA+CGG 0.403183 7.2:+12160061 None:intergenic
GCGAGGATTCGTGCTAAGAC+TGG 0.408160 7.2:+12159784 None:intergenic
GTAGAGGAGGTGATAGCATT+AGG 0.408521 7.2:-12155314 MS.gene061890:CDS
TAGATAGAGGATATGGGCTT+GGG 0.411972 7.2:-12155933 MS.gene061890:CDS
AGAGTCCTCTCGTTTCCGTT+TGG 0.412702 7.2:-12159627 MS.gene061890:CDS
AGTGTAATTGACTCTCTAAC+TGG 0.412794 7.2:+12159175 None:intergenic
AAACACGATGCATATTCTTT+GGG 0.414225 7.2:+12155879 None:intergenic
GATCGTGAGGCTCTTGAGTT+GGG 0.419719 7.2:-12155841 MS.gene061890:CDS
CATTGTAGATAGAGAAGATA+TGG 0.428138 7.2:+12156152 None:intergenic
CGGTTGAACCGGTTGAAGAA+TGG 0.435588 7.2:+12156255 None:intergenic
CTTCCATTCGTCTGCGGCAT+AGG 0.440186 7.2:-12159907 MS.gene061890:CDS
TCAAGAGCCTCACGATCATC+AGG 0.442577 7.2:+12155847 None:intergenic
TTTGACTCTAGCGGGTGTAA+TGG 0.443958 7.2:-12159485 MS.gene061890:CDS
AGATATACTTACAGCGTCAA+TGG 0.444162 7.2:-12155180 MS.gene061890:CDS
AACAGTGAAGTATATCGAAA+AGG 0.444649 7.2:-12155351 MS.gene061890:CDS
TGTAGATTGCCATCACTACT+GGG 0.444895 7.2:+12156544 None:intergenic
ACCGGTTCAACCGCGATGAA+TGG 0.446314 7.2:-12156245 MS.gene061890:CDS
TTTCAGGCCTATAGTCAATT+GGG 0.446528 7.2:-12156201 MS.gene061890:CDS
GTAGATAGAGGATATGGGCT+TGG 0.447367 7.2:-12155934 MS.gene061890:CDS
CTGCAGGGTGGAATTCTGTT+AGG 0.448606 7.2:-12160120 MS.gene061890:intron
TGCACCAATGTACAAGGTTA+AGG 0.450264 7.2:-12155096 MS.gene061890:CDS
GATTACGATCTCATAGTTGT+TGG 0.452922 7.2:-12155281 MS.gene061890:CDS
AGCTTTGTCTGCGCCGTCGA+CGG 0.461919 7.2:+12159861 None:intergenic
CTGTTAGGACCATCAGCGTT+AGG 0.462597 7.2:-12160105 MS.gene061890:CDS
GTGTTCCTTCCTAACGCTGA+TGG 0.462695 7.2:+12160096 None:intergenic
AATGAGTTCAACAAGTCCTT+TGG 0.465524 7.2:+12159135 None:intergenic
AGCGTCGGCATACTCCATTT+AGG 0.466113 7.2:+12160051 None:intergenic
GGCGCAGACAAAGCTGGATT+CGG 0.466738 7.2:-12159853 MS.gene061890:CDS
GTTGAACGCGGCGGCTGCCA+TGG 0.467385 7.2:+12159723 None:intergenic
AATGGTATAACCGCCTTGCT+GGG 0.471813 7.2:-12156227 MS.gene061890:CDS
ATTACGATCTCATAGTTGTT+GGG 0.472170 7.2:-12155280 MS.gene061890:CDS
GCTTGTGCTGGGAAGATTCT+GGG 0.479547 7.2:-12159229 MS.gene061890:CDS
CAGTTGCAGTGACCGTTGTA+AGG 0.479794 7.2:-12155795 MS.gene061890:CDS
AGGCCTATAGTCAATTGGGC+CGG 0.480197 7.2:-12156197 MS.gene061890:CDS
TATATTTGTTTGACTCTAGC+GGG 0.481449 7.2:-12159493 MS.gene061890:CDS
CATGAGGTGTTGGAGAATGC+TGG 0.481659 7.2:-12156021 MS.gene061890:CDS
ACAACGGTCACTGCAACTGC+CGG 0.482940 7.2:+12155799 None:intergenic
AGGTTGGCGGAGAGGTTTGA+AGG 0.490049 7.2:+12160542 None:intergenic
AATGTTGCTGAGGTTTCATC+TGG 0.490528 7.2:-12155062 MS.gene061890:CDS
ACAGTGAAGTATATCGAAAA+GGG 0.491374 7.2:-12155350 MS.gene061890:CDS
TGAGGTTATGTTTACCGGCA+TGG 0.492127 7.2:+12160680 None:intergenic
CACTACTGGGGTTGTGATGA+AGG 0.493266 7.2:+12156557 None:intergenic
GACCCGGCCCAATTGACTAT+AGG 0.494689 7.2:+12156194 None:intergenic
TTGCTGAGGTTTCATCTGGC+AGG 0.503819 7.2:-12155058 MS.gene061890:CDS
TGCACCTTAACCTTGTACAT+TGG 0.504718 7.2:+12155092 None:intergenic
TGATCGTGAGGCTCTTGAGT+TGG 0.505814 7.2:-12155842 MS.gene061890:CDS
GGATTAACTATTCCAAAGAC+AGG 0.507150 7.2:-12159403 MS.gene061890:CDS
TTGAAGAATTTGGGCTCAGA+TGG 0.509146 7.2:-12155910 MS.gene061890:CDS
GTCGACGGCGCAGACAAAGC+TGG 0.509320 7.2:-12159859 MS.gene061890:CDS
GATTCATAACAGATTTCATA+GGG 0.509984 7.2:-12159456 MS.gene061890:CDS
CAGCGATGACTTTAGGTTGG+CGG 0.512670 7.2:+12160529 None:intergenic
CGAGTCCTAGCTTGCATCCA+CGG 0.514336 7.2:-12156429 MS.gene061890:CDS
CAAAGAGGCTCATGAGGTGT+TGG 0.515231 7.2:-12156031 MS.gene061890:CDS
ACGTTCATCTTCAATCATCA+TGG 0.517934 7.2:-12156304 MS.gene061890:CDS
TGATTGCAACTGCTTGTGCT+GGG 0.518067 7.2:-12159240 MS.gene061890:CDS
AATTGGGCCGGGTCATAGTC+CGG 0.520167 7.2:-12156185 MS.gene061890:CDS
ACTAAGACAATTCGAAAGCT+AGG 0.521470 7.2:-12156501 MS.gene061890:CDS
CAGTTTGAATAATGAGGAGA+GGG 0.521804 7.2:+12160601 None:intergenic
TCCGGAGAGGAGCACCCAAA+CGG 0.523115 7.2:+12159612 None:intergenic
AAGTATATCGAAAAGGGTAG+TGG 0.523887 7.2:-12155344 MS.gene061890:CDS
GTTGATGATAGAGGGAATGT+TGG 0.524508 7.2:+12156401 None:intergenic
TATTACCCTTCCACAAACAT+TGG 0.525144 7.2:-12156080 MS.gene061890:CDS
GATATACTTACAGCGTCAAT+GGG 0.525240 7.2:-12155179 MS.gene061890:CDS
GAGGTTGATAGAGAGAATAG+AGG 0.525470 7.2:-12159368 MS.gene061890:CDS
CGATCTCATAGTTGTTGGGA+AGG 0.526074 7.2:-12155276 MS.gene061890:CDS
ATGATAGAGGGAATGTTGGT+TGG 0.527063 7.2:+12156405 None:intergenic
ACGCCTATGCCGCAGACGAA+TGG 0.527320 7.2:+12159904 None:intergenic
CCACTTTACTTTGCTTCGAG+TGG 0.527442 7.2:-12159322 MS.gene061890:CDS
GCGATCGCGTTAGCCGGAAA+CGG 0.528915 7.2:-12159670 MS.gene061890:CDS
CATCCTCCAATGTTTGTGGA+AGG 0.528987 7.2:+12156074 None:intergenic
TTGGACCGTGGATGCAAGCT+AGG 0.532076 7.2:+12156424 None:intergenic
CCACTCGAAGCAAAGTAAAG+TGG 0.533147 7.2:+12159322 None:intergenic
CAACGGTCACTGCAACTGCC+GGG 0.533178 7.2:+12155800 None:intergenic
TAGAGAAGATATGGCTGTAG+TGG 0.535358 7.2:+12156161 None:intergenic
GCTTTAGCGATCGCGTTAGC+CGG 0.535818 7.2:-12159676 MS.gene061890:CDS
TGGAGAATGCTGGGCATGGA+TGG 0.535888 7.2:-12156011 MS.gene061890:CDS
GGCCTATAGTCAATTGGGCC+GGG 0.536195 7.2:-12156196 MS.gene061890:CDS
TGAGCCACACGCTTCATCAC+AGG 0.536751 7.2:+12159553 None:intergenic
CATGCAGAGTTAGGTCCCAT+AGG 0.537039 7.2:-12155203 MS.gene061890:CDS
AAATCAGTGGTGGAAAAGCA+TGG 0.540773 7.2:-12159279 MS.gene061890:CDS
GATGGAGAGGTGTGAACCAA+AGG 0.541506 7.2:-12155993 MS.gene061890:CDS
CGAGGATTCGTGCTAAGACT+GGG 0.541692 7.2:+12159785 None:intergenic
AAGATATGGCTGTAGTGGAC+CGG 0.541796 7.2:+12156166 None:intergenic
GGTGGCAGAACTAGCAGAGA+GGG 0.544240 7.2:-12155234 MS.gene061890:CDS
GTTGCTGTGCTTGTAGATAG+AGG 0.545371 7.2:-12155946 MS.gene061890:CDS
GAAAGCAACGAAAGCAACTC+CGG 0.548567 7.2:+12159594 None:intergenic
GAACGCGGCGGCTGCCATGG+CGG 0.552292 7.2:+12159726 None:intergenic
ATTTAGGAAATATACGGTGC+AGG 0.553217 7.2:+12160067 None:intergenic
TACCCTTCCACAAACATTGG+AGG 0.553608 7.2:-12156077 MS.gene061890:CDS
ATCCTCCAATGTTTGTGGAA+GGG 0.557640 7.2:+12156075 None:intergenic
GAAGAAAATGGTTGAACACC+CGG 0.559996 7.2:-12155818 MS.gene061890:CDS
CTAAGACAGTTTGAATAATG+AGG 0.561036 7.2:+12160595 None:intergenic
CATCACAACCCCAGTAGTGA+TGG 0.561141 7.2:-12156553 MS.gene061890:CDS
TTAGTTACGATTCCACGAGC+TGG 0.561731 7.2:+12156519 None:intergenic
TCATAGTTGTTGGGAAGGGT+CGG 0.562457 7.2:-12155271 MS.gene061890:CDS
CTAGAATCTGTCGCAAGCAT+AGG 0.563288 7.2:-12160030 MS.gene061890:CDS
TCAATGAGGTTGATGATAGA+GGG 0.564000 7.2:+12156393 None:intergenic
TCAATCAAAACTTCCTCCGA+TGG 0.565083 7.2:-12160660 MS.gene061890:CDS
AATCAGTGGTGGAAAAGCAT+GGG 0.565398 7.2:-12159278 MS.gene061890:CDS
AGCGTCAATGGGCCACAAGA+TGG 0.565455 7.2:-12155168 MS.gene061890:CDS
ACAAGCACAGCAACAGAGCA+TGG 0.566045 7.2:+12155955 None:intergenic
TTGTTGTTGCAATGATGTGT+AGG 0.566525 7.2:-12159201 MS.gene061890:CDS
TGCTTGTAGATAGAGGATAT+GGG 0.568716 7.2:-12155939 MS.gene061890:CDS
TTATATTTGTTTGACTCTAG+CGG 0.570521 7.2:-12159494 MS.gene061890:CDS
ATGAGGTGTTGGAGAATGCT+GGG 0.571388 7.2:-12156020 MS.gene061890:CDS
ATCAACAGCTTCATTCTCCA+CGG 0.575474 7.2:+12159522 None:intergenic
ATCGCCTTGCCAGATTCCAT+CGG 0.577893 7.2:+12160644 None:intergenic
AGGTTGTGAAGAGTGCCATA+AGG 0.579651 7.2:+12156577 None:intergenic
TCCTCCGATGGAATCTGGCA+AGG 0.579692 7.2:-12160648 MS.gene061890:CDS
TGGCGGGCCTGATGATCGTG+AGG 0.582134 7.2:-12155854 MS.gene061890:CDS
GTCCTCCGCAAAACCGTCGA+CGG 0.583362 7.2:-12159874 MS.gene061890:CDS
GCAATCTACAAACCAGCTCG+TGG 0.584407 7.2:-12156531 MS.gene061890:CDS
GTTAGAGAGTCAATTACACT+TGG 0.584632 7.2:-12159172 MS.gene061890:CDS
GCATTCAGTATAGCAGCTTG+TGG 0.585968 7.2:-12159937 MS.gene061890:CDS
CGCGGCTAAGTCGTTGAACG+CGG 0.587980 7.2:+12159711 None:intergenic
ACAGTTTGAATAATGAGGAG+AGG 0.590712 7.2:+12160600 None:intergenic
ATCACTCTTCCATTCGTCTG+CGG 0.591198 7.2:-12159913 MS.gene061890:CDS
TAGATCTAAACTCAATTCGT+CGG 0.591765 7.2:-12159972 MS.gene061890:CDS
TTTCTCCCACGCGTGTTGTG+AGG 0.591806 7.2:+12159749 None:intergenic
GTGTTGGAGAATGCTGGGCA+TGG 0.592118 7.2:-12156015 MS.gene061890:CDS
GAACTCATTGTGCTTAACAT+CGG 0.594155 7.2:-12159121 MS.gene061890:CDS
AGAGGATGCACCAATGTACA+AGG 0.596044 7.2:-12155102 MS.gene061890:CDS
TCTCAGCGATGACTTTAGGT+TGG 0.599062 7.2:+12160526 None:intergenic
GGGTAGTGGCAACGTTGTAG+AGG 0.599832 7.2:-12155330 MS.gene061890:CDS
TAGGACCATCAGCGTTAGGA+AGG 0.602774 7.2:-12160101 MS.gene061890:CDS
TTAGCCGGAAACGGAGCCGA+CGG 0.604143 7.2:-12159661 MS.gene061890:CDS
AAATGACAAAGAGGCTCATG+AGG 0.604252 7.2:-12156037 MS.gene061890:CDS
ATGGAGAGGTGTGAACCAAA+GGG 0.605133 7.2:-12155992 MS.gene061890:CDS
GTTGATCAAAATGAATTGAG+TGG 0.606789 7.2:-12155769 MS.gene061890:CDS
TAGTGGCAACGTTGTAGAGG+AGG 0.608998 7.2:-12155327 MS.gene061890:CDS
CAAACTCCTCACAACACGCG+TGG 0.609638 7.2:-12159755 MS.gene061890:CDS
AATGCTGGGCATGGATGGAG+AGG 0.612350 7.2:-12156006 MS.gene061890:CDS
TAGTGGACCGGACTATGACC+CGG 0.614026 7.2:+12156178 None:intergenic
TGATGACGAAAATGACAAAG+AGG 0.614275 7.2:-12156046 MS.gene061890:CDS
GTAGATTGCCATCACTACTG+GGG 0.617747 7.2:+12156545 None:intergenic
GCCGGAAACGGAGCCGACGG+CGG 0.619166 7.2:-12159658 MS.gene061890:CDS
TCGGTTTCCGTCGACTATGG+TGG 0.621503 7.2:-12155252 MS.gene061890:CDS
CTAGAGAGCGGCTGACGACG+AGG 0.622963 7.2:+12160571 None:intergenic
GCTGTAAGTATATCTCCTAT+GGG 0.624303 7.2:+12155188 None:intergenic
ATCAGTGGTGGAAAAGCATG+GGG 0.626217 7.2:-12159277 MS.gene061890:CDS
CTTGCGACAGATTCTAGCGT+CGG 0.627203 7.2:+12160036 None:intergenic
ATGGTATAACCGCCTTGCTG+GGG 0.628464 7.2:-12156226 MS.gene061890:CDS
GAGTGCCATAAGGACCAAGA+TGG 0.629663 7.2:+12156587 None:intergenic
GGATATATGCCACATAGCAG+AGG 0.635525 7.2:-12156124 MS.gene061890:CDS
ATCGTGAGGCTCTTGAGTTG+GGG 0.638400 7.2:-12155840 MS.gene061890:CDS
GTTGGATGAAAATGCAATGG+AGG 0.640426 7.2:-12155396 MS.gene061890:CDS
CTTCCACAAACATTGGAGGA+TGG 0.642651 7.2:-12156073 MS.gene061890:CDS
CAACGAAAGCAACTCCGGAG+AGG 0.643114 7.2:+12159599 None:intergenic
GGCTAAGTCGTTGAACGCGG+CGG 0.643428 7.2:+12159714 None:intergenic
ATGACTTTAGGTTGGCGGAG+AGG 0.644105 7.2:+12160534 None:intergenic
GAACTGATGACACCATCTTG+TGG 0.644954 7.2:+12155156 None:intergenic
GGTGTTGGATGAAAATGCAA+TGG 0.645310 7.2:-12155399 MS.gene061890:CDS
AGTTCTGCCACCATAGTCGA+CGG 0.645824 7.2:+12155245 None:intergenic
AGAGGGAAAGCGTAATCGAG+AGG 0.646818 7.2:+12160618 None:intergenic
TCGTGCTAAGACTGGGAATG+CGG 0.647863 7.2:+12159792 None:intergenic
AGGCCTGAAAAGCCCCAGCA+AGG 0.649375 7.2:+12156214 None:intergenic
GCCTTGCCAGATTCCATCGG+AGG 0.649802 7.2:+12160647 None:intergenic
GATCTCATAGTTGTTGGGAA+GGG 0.652177 7.2:-12155275 MS.gene061890:CDS
AAACTCCTCACAACACGCGT+GGG 0.654718 7.2:-12159754 MS.gene061890:CDS
TTTGGGCTCAGATGGTAGTG+TGG 0.656894 7.2:-12155902 MS.gene061890:CDS
AGCACCCAAACGGAAACGAG+AGG 0.661226 7.2:+12159622 None:intergenic
GATCTAACTCGAGTCCAACA+AGG 0.661413 7.2:+12159989 None:intergenic
GGAGTGCTGATGAACACCAA+AGG 0.667450 7.2:-12159151 MS.gene061890:CDS
AACGTTCTGTGAGTTCAACA+AGG 0.670081 7.2:+12156322 None:intergenic
TTGATCAACGAACCTTACAA+CGG 0.670446 7.2:+12155783 None:intergenic
GATGTGACTAAAATCAGTGG+TGG 0.671353 7.2:-12159289 MS.gene061890:CDS
TTCTCTATCTACAATGCACG+AGG 0.671490 7.2:-12156145 MS.gene061890:CDS
GAGGAGTTTCGAAGCAAGTG+TGG 0.675283 7.2:-12155377 MS.gene061890:CDS
TGAAGGCGAAAGCTAGAGAG+CGG 0.682812 7.2:+12160559 None:intergenic
CTAAACTCAATTCGTCGGAG+CGG 0.688261 7.2:-12159967 MS.gene061890:CDS
CGTTCAACGACTTAGCCGCG+TGG 0.694828 7.2:-12159708 MS.gene061890:CDS
GCATGATGAGAATGTTGCTG+AGG 0.695544 7.2:-12155072 MS.gene061890:CDS
AGGGAATGTTGGTTGGACCG+TGG 0.705082 7.2:+12156412 None:intergenic
CCTGAAAAGCCCCAGCAAGG+CGG 0.705239 7.2:+12156217 None:intergenic
TGTGGCTCAAAGATGCTCCG+TGG 0.705313 7.2:-12159539 MS.gene061890:CDS
ACTGATGTGACTAAAATCAG+TGG 0.713846 7.2:-12159292 MS.gene061890:CDS
ACGCGTGGGAGAAACCGCCA+TGG 0.714652 7.2:-12159740 MS.gene061890:CDS
TGAGGAGTTTGAGTTCAGCG+AGG 0.714995 7.2:+12159767 None:intergenic
ACATGATGTAGCATTGACAG+AGG 0.715489 7.2:-12155120 MS.gene061890:CDS
TGGTGGCAGAACTAGCAGAG+AGG 0.722330 7.2:-12155235 MS.gene061890:CDS
GGCGGTTATACCATTCATCG+CGG 0.725195 7.2:+12156235 None:intergenic
CTCTAAAGAAAACAACAATG+TGG 0.735931 7.2:-12156463 MS.gene061890:CDS
TGCTACGTGTTGACTCAATG+AGG 0.739542 7.2:+12156379 None:intergenic
AAGTCCTGTGATGAAGCGTG+TGG 0.742473 7.2:-12159557 MS.gene061890:CDS
TCAGTGGTGGAAAAGCATGG+GGG 0.780346 7.2:-12159276 MS.gene061890:CDS
TAAAGCGAGTAGAATCCACG+CGG 0.877257 7.2:+12159693 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAGAATACTAATAATAATA+TGG + chr7.2:12156746-12156765 None:intergenic 10.0%
!! AAATTGAAAATTATTAGATT+GGG + chr7.2:12158534-12158553 None:intergenic 10.0%
!! TAAAAAAAGATAGTAAAATT+TGG - chr7.2:12157258-12157277 MS.gene061890:intron 10.0%
!! TTATTAATTACAATTATGTA+TGG - chr7.2:12155545-12155564 MS.gene061890:intron 10.0%
!!! TCATTTATTCATATTTTTAT+TGG - chr7.2:12158876-12158895 MS.gene061890:intron 10.0%
!!! TGATATGTTTTTTTTTATAT+AGG + chr7.2:12158477-12158496 None:intergenic 10.0%
!! ATTAGTACAAGTAATTTAAA+TGG + chr7.2:12158004-12158023 None:intergenic 15.0%
!! CAAATTGAAAATTATTAGAT+TGG + chr7.2:12158535-12158554 None:intergenic 15.0%
!! TAAAGTATACAAAACAAAAT+TGG - chr7.2:12157456-12157475 MS.gene061890:intron 15.0%
!! TAATTATATTATACCTATCA+AGG - chr7.2:12158447-12158466 MS.gene061890:intron 15.0%
!!! AATATATTTTACTTAACCTA+TGG - chr7.2:12158695-12158714 MS.gene061890:intron 15.0%
!!! AATGATTTGTTTAATCTATA+TGG + chr7.2:12158857-12158876 None:intergenic 15.0%
!!! ATTTTACTATCTTTTTTTAG+AGG + chr7.2:12157257-12157276 None:intergenic 15.0%
!!! CTTAATTTTGCTTATATTTA+CGG - chr7.2:12155257-12155276 MS.gene061890:CDS 15.0%
!!! TATTACTTTTCTAGTAAAAT+AGG + chr7.2:12158072-12158091 None:intergenic 15.0%
!!! TATTTTTTCCCATTTTTTAA+AGG + chr7.2:12157021-12157040 None:intergenic 15.0%
!!! TTAATTTTGCTTATATTTAC+GGG - chr7.2:12155258-12155277 MS.gene061890:CDS 15.0%
!!! TTCATATTTTTATTGGAATA+TGG - chr7.2:12158883-12158902 MS.gene061890:intron 15.0%
!! AAAAGAAAATTAATCACCAT+AGG + chr7.2:12158714-12158733 None:intergenic 20.0%
!! AAAAGATTTAACTGAAGATA+GGG - chr7.2:12156920-12156939 MS.gene061890:intron 20.0%
!! CATTAATTGATTAGTGATAA+TGG - chr7.2:12157769-12157788 MS.gene061890:intron 20.0%
!! CATTATCACTAATCAATTAA+TGG + chr7.2:12157771-12157790 None:intergenic 20.0%
!! TATAATTATAATCGTCACAA+AGG + chr7.2:12155456-12155475 None:intergenic 20.0%
!!! AATTTGGTTAAAGATTTTAG+TGG - chr7.2:12157274-12157293 MS.gene061890:intron 20.0%
!!! ACCATAGTGATTTAATTTAA+TGG - chr7.2:12160086-12160105 MS.gene061890:CDS 20.0%
!!! ATATAACGCCTTTAAAAAAT+GGG - chr7.2:12157010-12157029 MS.gene061890:intron 20.0%
!!! ATTATTAATATTAACTTGGC+TGG - chr7.2:12158599-12158618 MS.gene061890:intron 20.0%
!!! GAGTATTTTAGAAACATTAT+TGG - chr7.2:12157134-12157153 MS.gene061890:intron 20.0%
!!! GTGAATCATCAATATTTTTA+TGG + chr7.2:12158264-12158283 None:intergenic 20.0%
!!! TAATTAGATGCTTTTTTTAC+TGG - chr7.2:12159062-12159081 MS.gene061890:intron 20.0%
!!! TAATTTTGCTTATATTTACG+GGG - chr7.2:12155259-12155278 MS.gene061890:CDS 20.0%
!!! TACTGTCTCTTTAAAAAAAA+AGG + chr7.2:12158817-12158836 None:intergenic 20.0%
!!! TATATAACGCCTTTAAAAAA+TGG - chr7.2:12157009-12157028 MS.gene061890:intron 20.0%
!!! TCATCAATATTTTTATGGTA+TGG + chr7.2:12158259-12158278 None:intergenic 20.0%
!!! TTATTAATATTAACTTGGCT+GGG - chr7.2:12158600-12158619 MS.gene061890:intron 20.0%
! AAAATTAGAGTTCATGCAAT+TGG + chr7.2:12157729-12157748 None:intergenic 25.0%
! AATTAATCGACAAAAAGAAC+AGG - chr7.2:12160029-12160048 MS.gene061890:CDS 25.0%
! ACAGTATCTTAGTGTATTAT+TGG - chr7.2:12157577-12157596 MS.gene061890:intron 25.0%
! ACTAATTTACTCTCTCTTAA+TGG - chr7.2:12158018-12158037 MS.gene061890:intron 25.0%
! ACTTCAGATATAAAACTGAA+GGG + chr7.2:12159017-12159036 None:intergenic 25.0%
! AGGAATTAATTAAGATGATG+AGG + chr7.2:12155218-12155237 None:intergenic 25.0%
! AGTAGAAAAGATACTAAAGA+AGG + chr7.2:12157843-12157862 None:intergenic 25.0%
! ATAAATTCATGTTCAGAGTT+CGG + chr7.2:12156856-12156875 None:intergenic 25.0%
! CTAATTTACTCTCTCTTAAT+GGG - chr7.2:12158019-12158038 MS.gene061890:intron 25.0%
! GAAAAGATTTAACTGAAGAT+AGG - chr7.2:12156919-12156938 MS.gene061890:intron 25.0%
! GATATATGCTGTAAAAAAAG+TGG - chr7.2:12157301-12157320 MS.gene061890:intron 25.0%
! GATTCATAACAGATTTCATA+GGG - chr7.2:12156250-12156269 MS.gene061890:CDS 25.0%
! GCCATTAAATTAAATCACTA+TGG + chr7.2:12160090-12160109 None:intergenic 25.0%
! GCTAAGCTTAAATATGTTAT+TGG - chr7.2:12160171-12160190 MS.gene061890:intron 25.0%
! TACTCCATTTAGGAAATATA+CGG + chr7.2:12155648-12155667 None:intergenic 25.0%
! TACTTCAGATATAAAACTGA+AGG + chr7.2:12159018-12159037 None:intergenic 25.0%
! TATAAAATACATAAGCTGCA+AGG - chr7.2:12155339-12155358 MS.gene061890:CDS 25.0%
! TATTGGAAAATAATGTCATG+TGG - chr7.2:12157594-12157613 MS.gene061890:intron 25.0%
! TGATATGTCTAATATTGTAC+AGG - chr7.2:12155287-12155306 MS.gene061890:CDS 25.0%
! TTATATTTGTTTGACTCTAG+CGG - chr7.2:12156212-12156231 MS.gene061890:CDS 25.0%
! TTGAACACATCATTAAACAA+AGG - chr7.2:12157112-12157131 MS.gene061890:intron 25.0%
!! AAACATATCAGTGCTATTAT+TGG - chr7.2:12158487-12158506 MS.gene061890:intron 25.0%
!! ATTTTCAACAATACCTTGAT+TGG - chr7.2:12156806-12156825 MS.gene061890:intron 25.0%
!! CGAGATTTTATGATAAAAGT+AGG - chr7.2:12156891-12156910 MS.gene061890:intron 25.0%
!! GATTTTATGATAAAAGTAGG+AGG - chr7.2:12156894-12156913 MS.gene061890:intron 25.0%
!! TTTTCTTGTGATTTTCTTTC+TGG - chr7.2:12157745-12157764 MS.gene061890:intron 25.0%
!! TTTTGTCTTAGGCAAATAAT+AGG - chr7.2:12158558-12158577 MS.gene061890:intron 25.0%
!! TTTTTACTGGACTAAATTAC+AGG - chr7.2:12159075-12159094 MS.gene061890:intron 25.0%
!!! AGAATAGAGGATTTTGTTTT+GGG - chr7.2:12156351-12156370 MS.gene061890:CDS 25.0%
!!! ATTGTTGTTTTCTTTAGAGT+GGG + chr7.2:12159242-12159261 None:intergenic 25.0%
!!! CTTTTCTAGTAAAATAGGAT+AGG + chr7.2:12158067-12158086 None:intergenic 25.0%
!!! GAAACACTTTAATTTTAAGC+CGG - chr7.2:12157944-12157963 MS.gene061890:intron 25.0%
!!! TCAATATTTTTATGGTATGG+TGG + chr7.2:12158256-12158275 None:intergenic 25.0%
!!! TCAATTTGTCATTTTGTCTT+AGG - chr7.2:12158547-12158566 MS.gene061890:intron 25.0%
!!! TGCTATTATTGGTTTGTTTT+TGG - chr7.2:12158498-12158517 MS.gene061890:intron 25.0%
AAAACACGATGCATATTCTT+TGG + chr7.2:12159831-12159850 None:intergenic 30.0%
AAACACGATGCATATTCTTT+GGG + chr7.2:12159830-12159849 None:intergenic 30.0%
AACAGTGAAGTATATCGAAA+AGG - chr7.2:12160355-12160374 MS.gene061890:intron 30.0%
AATGTTTGTTTACATGTGCA+TGG - chr7.2:12158155-12158174 MS.gene061890:intron 30.0%
ACAGTGAAGTATATCGAAAA+GGG - chr7.2:12160356-12160375 MS.gene061890:intron 30.0%
ATTACGATCTCATAGTTGTT+GGG - chr7.2:12160426-12160445 MS.gene061890:intron 30.0%
ATTAGCAAAAATTTGACACC+AGG + chr7.2:12158661-12158680 None:intergenic 30.0%
ATTATTACAACCCAAGAAAG+TGG + chr7.2:12158138-12158157 None:intergenic 30.0%
CAAAATAAAGGTAAACGGAA+GGG + chr7.2:12158984-12159003 None:intergenic 30.0%
CATAAGCAACTTATTTGACT+TGG - chr7.2:12157531-12157550 MS.gene061890:intron 30.0%
CATTGTAGATAGAGAAGATA+TGG + chr7.2:12159557-12159576 None:intergenic 30.0%
CTAAGACAGTTTGAATAATG+AGG + chr7.2:12155114-12155133 None:intergenic 30.0%
CTTCAGATATAAAACTGAAG+GGG + chr7.2:12159016-12159035 None:intergenic 30.0%
CTTCCTAACTTTATTCAACA+CGG + chr7.2:12157661-12157680 None:intergenic 30.0%
GCATATACTAAATGCAAGAT+AGG + chr7.2:12157874-12157893 None:intergenic 30.0%
GGATTCATAACAGATTTCAT+AGG - chr7.2:12156249-12156268 MS.gene061890:CDS 30.0%
GTAGAATAAAGTTGAATGTG+AGG + chr7.2:12155238-12155257 None:intergenic 30.0%
GTTGATCAAAATGAATTGAG+TGG - chr7.2:12159937-12159956 MS.gene061890:CDS 30.0%
TAACATCGGAAAAGAGAAAA+AGG - chr7.2:12156599-12156618 MS.gene061890:CDS 30.0%
TACCCCAAAATAAAGGTAAA+CGG + chr7.2:12158989-12159008 None:intergenic 30.0%
TAGATCTAAACTCAATTCGT+CGG - chr7.2:12155734-12155753 MS.gene061890:CDS 30.0%
TATATTTGTTTGACTCTAGC+GGG - chr7.2:12156213-12156232 MS.gene061890:CDS 30.0%
TGAATCTCGTGAATAAACTT+AGG - chr7.2:12157811-12157830 MS.gene061890:intron 30.0%
TGATGAAATATTTGCCATCT+TGG - chr7.2:12159105-12159124 MS.gene061890:intron 30.0%
TTGATTGAGGTTATGTTTAC+CGG + chr7.2:12155034-12155053 None:intergenic 30.0%
! CATTGCTATTGATTAAATGC+AGG - chr7.2:12160286-12160305 MS.gene061890:intron 30.0%
! CTCTAAAGAAAACAACAATG+TGG - chr7.2:12159243-12159262 MS.gene061890:CDS 30.0%
! TATTGATTAAATGCAGGTGT+TGG - chr7.2:12160292-12160311 MS.gene061890:intron 30.0%
!! AGACTTTGAGAAGTGATTTT+TGG + chr7.2:12159354-12159373 None:intergenic 30.0%
!! GACTTTGAGAAGTGATTTTT+GGG + chr7.2:12159353-12159372 None:intergenic 30.0%
!! GAGAATAGAGGATTTTGTTT+TGG - chr7.2:12156350-12156369 MS.gene061890:CDS 30.0%
!! TTGTCGATTAATTTTTGCGA+TGG + chr7.2:12160022-12160041 None:intergenic 30.0%
!!! AGAATATGCATCGTGTTTTT+TGG - chr7.2:12159832-12159851 MS.gene061890:CDS 30.0%
!!! CATTGTTGTTTTCTTTAGAG+TGG + chr7.2:12159243-12159262 None:intergenic 30.0%
!!! CATTTCTTGTTTTGATAGCA+AGG + chr7.2:12157925-12157944 None:intergenic 30.0%
!!! CTTCCGTTTACCTTTATTTT+GGG - chr7.2:12158983-12159002 MS.gene061890:intron 30.0%
!!! GAATAGAGGATTTTGTTTTG+GGG - chr7.2:12156352-12156371 MS.gene061890:CDS 30.0%
!!! TTCCGTTTACCTTTATTTTG+GGG - chr7.2:12158984-12159003 MS.gene061890:intron 30.0%
AAGTATATCGAAAAGGGTAG+TGG - chr7.2:12160362-12160381 MS.gene061890:intron 35.0%
AATGAGTTCAACAAGTCCTT+TGG + chr7.2:12156574-12156593 None:intergenic 35.0%
ACAGTTTGAATAATGAGGAG+AGG + chr7.2:12155109-12155128 None:intergenic 35.0%
ACGTTCATCTTCAATCATCA+TGG - chr7.2:12159402-12159421 MS.gene061890:CDS 35.0%
ACTAAGACAATTCGAAAGCT+AGG - chr7.2:12159205-12159224 MS.gene061890:CDS 35.0%
ACTGATGTGACTAAAATCAG+TGG - chr7.2:12156414-12156433 MS.gene061890:CDS 35.0%
AGATATACTTACAGCGTCAA+TGG - chr7.2:12160526-12160545 MS.gene061890:CDS 35.0%
AGGATATAGAAGCTTGATTC+TGG - chr7.2:12157326-12157345 MS.gene061890:intron 35.0%
ATCTCGTGAATAAACTTAGG+TGG - chr7.2:12157814-12157833 MS.gene061890:intron 35.0%
ATGCTGTAAAAAAAGTGGTG+AGG - chr7.2:12157306-12157325 MS.gene061890:intron 35.0%
ATTTAGGAAATATACGGTGC+AGG + chr7.2:12155642-12155661 None:intergenic 35.0%
CAGTTTGAATAATGAGGAGA+GGG + chr7.2:12155108-12155127 None:intergenic 35.0%
CCAAAATAAAGGTAAACGGA+AGG + chr7.2:12158985-12159004 None:intergenic 35.0%
CTTCCTAGCTAATTTATGAC+CGG + chr7.2:12157966-12157985 None:intergenic 35.0%
GAACTCATTGTGCTTAACAT+CGG - chr7.2:12156585-12156604 MS.gene061890:CDS 35.0%
GATATACTTACAGCGTCAAT+GGG - chr7.2:12160527-12160546 MS.gene061890:CDS 35.0%
GATTACGATCTCATAGTTGT+TGG - chr7.2:12160425-12160444 MS.gene061890:intron 35.0%
GATTCTATAAGCCAATCGAA+GGG + chr7.2:12158185-12158204 None:intergenic 35.0%
GCTGTAAGTATATCTCCTAT+GGG + chr7.2:12160521-12160540 None:intergenic 35.0%
GGATTAACTATTCCAAAGAC+AGG - chr7.2:12156303-12156322 MS.gene061890:CDS 35.0%
GTCATGTGGTTGACAAATTT+GGG - chr7.2:12157608-12157627 MS.gene061890:intron 35.0%
GTGGAACTCATTAGAAACTA+TGG + chr7.2:12158237-12158256 None:intergenic 35.0%
GTTAGAGAGTCAATTACACT+TGG - chr7.2:12156534-12156553 MS.gene061890:CDS 35.0%
TACTAAATGCAAGATAGGCA+TGG + chr7.2:12157869-12157888 None:intergenic 35.0%
TATGTGTAGACTGTAGTTGT+AGG - chr7.2:12156829-12156848 MS.gene061890:intron 35.0%
TATTACCCTTCCACAAACAT+TGG - chr7.2:12159626-12159645 MS.gene061890:CDS 35.0%
TGATTCTATAAGCCAATCGA+AGG + chr7.2:12158186-12158205 None:intergenic 35.0%
TGCACCGTATATTTCCTAAA+TGG - chr7.2:12155641-12155660 MS.gene061890:intron 35.0%
TGCTTGTAGATAGAGGATAT+GGG - chr7.2:12159767-12159786 MS.gene061890:CDS 35.0%
TGTCATGTGGTTGACAAATT+TGG - chr7.2:12157607-12157626 MS.gene061890:intron 35.0%
TTATATAGGCAAGCCTTGAT+AGG + chr7.2:12158463-12158482 None:intergenic 35.0%
TTGATCAACGAACCTTACAA+CGG + chr7.2:12159926-12159945 None:intergenic 35.0%
TTTACTCTCTCTTAATGGGA+TGG - chr7.2:12158023-12158042 MS.gene061890:intron 35.0%
TTTCAGGCCTATAGTCAATT+GGG - chr7.2:12159505-12159524 MS.gene061890:CDS 35.0%
! ACATCGTTCAACTTTTCATG+TGG + chr7.2:12157489-12157508 None:intergenic 35.0%
! AGTGTAATTGACTCTCTAAC+TGG + chr7.2:12156534-12156553 None:intergenic 35.0%
! ATAGGGATTCACTCGATTTT+TGG - chr7.2:12156267-12156286 MS.gene061890:CDS 35.0%
! CTTTTCTTTCTCTTCCTTGT+TGG - chr7.2:12155703-12155722 MS.gene061890:CDS 35.0%
! GGTCAATTCATCGTTTTCAT+GGG - chr7.2:12155874-12155893 MS.gene061890:CDS 35.0%
! TAGGGATTCACTCGATTTTT+GGG - chr7.2:12156268-12156287 MS.gene061890:CDS 35.0%
! TCCAAAGACAGGTAATTTTG+CGG - chr7.2:12156314-12156333 MS.gene061890:CDS 35.0%
! TGATGACGAAAATGACAAAG+AGG - chr7.2:12159660-12159679 MS.gene061890:CDS 35.0%
! TTGTTGTTGCAATGATGTGT+AGG - chr7.2:12156505-12156524 MS.gene061890:CDS 35.0%
!! CCTTCCGTTTACCTTTATTT+TGG - chr7.2:12158982-12159001 MS.gene061890:intron 35.0%
!! CTCGAGGGATTCATTTTTAT+TGG + chr7.2:12158910-12158929 None:intergenic 35.0%
!! GGTTAAAGATTTTAGTGGTG+AGG - chr7.2:12157279-12157298 MS.gene061890:intron 35.0%
!! TTTTCAGGCCTATAGTCAAT+TGG - chr7.2:12159504-12159523 MS.gene061890:CDS 35.0%
!!! ATATGCATCGTGTTTTTTGG+CGG - chr7.2:12159835-12159854 MS.gene061890:CDS 35.0%
!!! ATTTTTGGGGCGTTTGTTTT+TGG - chr7.2:12156282-12156301 MS.gene061890:CDS 35.0%
!!! CTTTTATTGATTTGGTGGGT+CGG - chr7.2:12157409-12157428 MS.gene061890:intron 35.0%
!!! TGGCCTTTTATTGATTTGGT+GGG - chr7.2:12157405-12157424 MS.gene061890:intron 35.0%
!!! TGGTTGGCCTTTTATTGATT+TGG - chr7.2:12157401-12157420 MS.gene061890:intron 35.0%
!!! TGTCACACTGTTCCTTTTTT+TGG + chr7.2:12157379-12157398 None:intergenic 35.0%
!!! TTGGCCTTTTATTGATTTGG+TGG - chr7.2:12157404-12157423 MS.gene061890:intron 35.0%
AAAAGGAACAGTGTGACAGA+TGG - chr7.2:12157381-12157400 MS.gene061890:intron 40.0%
AAATGACAAAGAGGCTCATG+AGG - chr7.2:12159669-12159688 MS.gene061890:CDS 40.0%
AACGTTCTGTGAGTTCAACA+AGG + chr7.2:12159387-12159406 None:intergenic 40.0%
AAGCCGGTCATAAATTAGCT+AGG - chr7.2:12157960-12157979 MS.gene061890:intron 40.0%
AATGTTGCTGAGGTTTCATC+TGG - chr7.2:12160644-12160663 MS.gene061890:CDS 40.0%
ATCAACAGCTTCATTCTCCA+CGG + chr7.2:12156187-12156206 None:intergenic 40.0%
ATCCTCCAATGTTTGTGGAA+GGG + chr7.2:12159634-12159653 None:intergenic 40.0%
ATGATAGAGGGAATGTTGGT+TGG + chr7.2:12159304-12159323 None:intergenic 40.0%
ATTACAACCCAAGAAAGTGG+TGG + chr7.2:12158135-12158154 None:intergenic 40.0%
ATTTGCCATCTTGGTCCTTA+TGG - chr7.2:12159114-12159133 MS.gene061890:CDS 40.0%
CAGCCGTGTTGAATAAAGTT+AGG - chr7.2:12157655-12157674 MS.gene061890:intron 40.0%
CAGTCTACACATACCAATCA+AGG + chr7.2:12156822-12156841 None:intergenic 40.0%
CGACCCACCAAATCAATAAA+AGG + chr7.2:12157411-12157430 None:intergenic 40.0%
CGCTGTAAGTATATCTCCTA+TGG + chr7.2:12160522-12160541 None:intergenic 40.0%
GAAGAAAATGGTTGAACACC+CGG - chr7.2:12159888-12159907 MS.gene061890:CDS 40.0%
GAGCATTCTTTAGTACCCTT+TGG + chr7.2:12159732-12159751 None:intergenic 40.0%
GATCTCATAGTTGTTGGGAA+GGG - chr7.2:12160431-12160450 MS.gene061890:intron 40.0%
GATGTGACTAAAATCAGTGG+TGG - chr7.2:12156417-12156436 MS.gene061890:CDS 40.0%
GTGCTTGTAGATAGAGGATA+TGG - chr7.2:12159766-12159785 MS.gene061890:CDS 40.0%
GTTGGATGAAAATGCAATGG+AGG - chr7.2:12160310-12160329 MS.gene061890:intron 40.0%
TAGAGAAGATATGGCTGTAG+TGG + chr7.2:12159548-12159567 None:intergenic 40.0%
TAGAGAATAAACATCCTGCC+TGG - chr7.2:12158640-12158659 MS.gene061890:intron 40.0%
TAGATAGAGGATATGGGCTT+GGG - chr7.2:12159773-12159792 MS.gene061890:CDS 40.0%
TCAATCAAAACTTCCTCCGA+TGG - chr7.2:12155046-12155065 MS.gene061890:CDS 40.0%
TCCGCAAAATTACCTGTCTT+TGG + chr7.2:12156318-12156337 None:intergenic 40.0%
TGCACCAATGTACAAGGTTA+AGG - chr7.2:12160610-12160629 MS.gene061890:CDS 40.0%
TGCACCTTAACCTTGTACAT+TGG + chr7.2:12160617-12160636 None:intergenic 40.0%
TGCGACTTGTGTCCAAAAAA+AGG - chr7.2:12157364-12157383 MS.gene061890:intron 40.0%
TGTAGATTGCCATCACTACT+GGG + chr7.2:12159165-12159184 None:intergenic 40.0%
TTACAACCCAAGAAAGTGGT+GGG + chr7.2:12158134-12158153 None:intergenic 40.0%
TTCTCTATCTACAATGCACG+AGG - chr7.2:12159561-12159580 MS.gene061890:CDS 40.0%
TTGAAGAATTTGGGCTCAGA+TGG - chr7.2:12159796-12159815 MS.gene061890:CDS 40.0%
TTGTAGATTGCCATCACTAC+TGG + chr7.2:12159166-12159185 None:intergenic 40.0%
! AAATCAGTGGTGGAAAAGCA+TGG - chr7.2:12156427-12156446 MS.gene061890:CDS 40.0%
! AATCAGTGGTGGAAAAGCAT+GGG - chr7.2:12156428-12156447 MS.gene061890:CDS 40.0%
! ACGGTTTTCCATTCTTCAAC+CGG - chr7.2:12159443-12159462 MS.gene061890:CDS 40.0%
! AGGGATTCACTCGATTTTTG+GGG - chr7.2:12156269-12156288 MS.gene061890:CDS 40.0%
! AGTGATTTGCATGTATCTGC+AGG - chr7.2:12155570-12155589 MS.gene061890:intron 40.0%
! CGGTCAATTCATCGTTTTCA+TGG - chr7.2:12155873-12155892 MS.gene061890:CDS 40.0%
! GGAGAAGCTATAGTTTTCGT+CGG + chr7.2:12160001-12160020 None:intergenic 40.0%
! GGTGTTGGATGAAAATGCAA+TGG - chr7.2:12160307-12160326 MS.gene061890:intron 40.0%
! GTGATTTGCATGTATCTGCA+GGG - chr7.2:12155571-12155590 MS.gene061890:intron 40.0%
!! ACATGATGTAGCATTGACAG+AGG - chr7.2:12160586-12160605 MS.gene061890:CDS 40.0%
!! GAGGTTGATAGAGAGAATAG+AGG - chr7.2:12156338-12156357 MS.gene061890:CDS 40.0%
!! GTTGATGATAGAGGGAATGT+TGG + chr7.2:12159308-12159327 None:intergenic 40.0%
!! TCTTGAGTTGGGGAAGAAAA+TGG - chr7.2:12159876-12159895 MS.gene061890:CDS 40.0%
!! TGGGATTGTTTTGCTGCAAT+TGG - chr7.2:12157627-12157646 MS.gene061890:intron 40.0%
!! TTGTTTTGCTGCAATTGGCT+TGG - chr7.2:12157632-12157651 MS.gene061890:intron 40.0%
!!! ATCGGAGGAAGTTTTGATTG+AGG + chr7.2:12155047-12155066 None:intergenic 40.0%
!!! GTTGTTTTCTTTAGAGTGGG+AGG + chr7.2:12159239-12159258 None:intergenic 40.0%
!!! TATGCATCGTGTTTTTTGGC+GGG - chr7.2:12159836-12159855 MS.gene061890:CDS 40.0%
!!! TTTGTTTTACGCCAATCACC+TGG - chr7.2:12159967-12159986 MS.gene061890:CDS 40.0%
AAACTTCCTCCGATGGAATC+TGG - chr7.2:12155053-12155072 MS.gene061890:CDS 45.0%
AAATGAATCCCTCGAGTACG+TGG - chr7.2:12158914-12158933 MS.gene061890:intron 45.0%
AATGGTATAACCGCCTTGCT+GGG - chr7.2:12159479-12159498 MS.gene061890:CDS 45.0%
ACGATCTCAGCGATGACTTT+AGG + chr7.2:12155187-12155206 None:intergenic 45.0%
AGAGGATGCACCAATGTACA+AGG - chr7.2:12160604-12160623 MS.gene061890:CDS 45.0%
ATCACTCTTCCATTCGTCTG+CGG - chr7.2:12155793-12155812 MS.gene061890:CDS 45.0%
ATTTGCATGTATCTGCAGGG+TGG - chr7.2:12155574-12155593 MS.gene061890:intron 45.0%
CATCCTCCAATGTTTGTGGA+AGG + chr7.2:12159635-12159654 None:intergenic 45.0%
CCACTCGAAGCAAAGTAAAG+TGG + chr7.2:12156387-12156406 None:intergenic 45.0%
CCACTTTACTTTGCTTCGAG+TGG - chr7.2:12156384-12156403 MS.gene061890:CDS 45.0%
CGATCTCATAGTTGTTGGGA+AGG - chr7.2:12160430-12160449 MS.gene061890:intron 45.0%
CTAAACTCAATTCGTCGGAG+CGG - chr7.2:12155739-12155758 MS.gene061890:CDS 45.0%
CTAGAATCTGTCGCAAGCAT+AGG - chr7.2:12155676-12155695 MS.gene061890:intron 45.0%
CTCTTTCCCACCACTTTCTT+GGG - chr7.2:12158125-12158144 MS.gene061890:intron 45.0%
CTTCCACAAACATTGGAGGA+TGG - chr7.2:12159633-12159652 MS.gene061890:CDS 45.0%
CTTCCATCCTCCAATGTTTG+TGG + chr7.2:12159639-12159658 None:intergenic 45.0%
GAAAGCAACGAAAGCAACTC+CGG + chr7.2:12156115-12156134 None:intergenic 45.0%
GAACTGATGACACCATCTTG+TGG + chr7.2:12160553-12160572 None:intergenic 45.0%
GATCTAACTCGAGTCCAACA+AGG + chr7.2:12155720-12155739 None:intergenic 45.0%
GCAAAAATTTGACACCAGGC+AGG + chr7.2:12158657-12158676 None:intergenic 45.0%
GCATGATGAGAATGTTGCTG+AGG - chr7.2:12160634-12160653 MS.gene061890:CDS 45.0%
GCATTCAGTATAGCAGCTTG+TGG - chr7.2:12155769-12155788 MS.gene061890:CDS 45.0%
GGATATATGCCACATAGCAG+AGG - chr7.2:12159582-12159601 MS.gene061890:CDS 45.0%
GGGACTGTACCCCAAAATAA+AGG + chr7.2:12158996-12159015 None:intergenic 45.0%
GTAGAGGAGGTGATAGCATT+AGG - chr7.2:12160392-12160411 MS.gene061890:intron 45.0%
GTAGATAGAGGATATGGGCT+TGG - chr7.2:12159772-12159791 MS.gene061890:CDS 45.0%
GTAGATTGCCATCACTACTG+GGG + chr7.2:12159164-12159183 None:intergenic 45.0%
GTGGGAAAGAGCTCATATTG+TGG + chr7.2:12158116-12158135 None:intergenic 45.0%
GTTGCTGTGCTTGTAGATAG+AGG - chr7.2:12159760-12159779 MS.gene061890:CDS 45.0%
TAAAGCGAGTAGAATCCACG+CGG + chr7.2:12156016-12156035 None:intergenic 45.0%
TACCCTTCCACAAACATTGG+AGG - chr7.2:12159629-12159648 MS.gene061890:CDS 45.0%
TCATAGTTGTTGGGAAGGGT+CGG - chr7.2:12160435-12160454 MS.gene061890:intron 45.0%
TCTCAGCGATGACTTTAGGT+TGG + chr7.2:12155183-12155202 None:intergenic 45.0%
TGATTGCAACTGCTTGTGCT+GGG - chr7.2:12156466-12156485 MS.gene061890:CDS 45.0%
TTAGTTACGATTCCACGAGC+TGG + chr7.2:12159190-12159209 None:intergenic 45.0%
! AGACAGGTAATTTTGCGGAG+AGG - chr7.2:12156319-12156338 MS.gene061890:CDS 45.0%
! ATCAGTGGTGGAAAAGCATG+GGG - chr7.2:12156429-12156448 MS.gene061890:CDS 45.0%
! ATGGAGAGGTGTGAACCAAA+GGG - chr7.2:12159714-12159733 MS.gene061890:CDS 45.0%
! CTCTCTTTTCCTCTGCTATG+TGG + chr7.2:12159594-12159613 None:intergenic 45.0%
! TTTGACTCTAGCGGGTGTAA+TGG - chr7.2:12156221-12156240 MS.gene061890:CDS 45.0%
! TTTTCGTCGGTACTTTTGCC+AGG + chr7.2:12159988-12160007 None:intergenic 45.0%
!! AAGATATGGCTGTAGTGGAC+CGG + chr7.2:12159543-12159562 None:intergenic 45.0%
!! AGGTTGTGAAGAGTGCCATA+AGG + chr7.2:12159132-12159151 None:intergenic 45.0%
!! ATGAGGTGTTGGAGAATGCT+GGG - chr7.2:12159686-12159705 MS.gene061890:CDS 45.0%
!! GGGCTTGGGTTGAAGAATTT+GGG - chr7.2:12159787-12159806 MS.gene061890:CDS 45.0%
!! TGGGCTTGGGTTGAAGAATT+TGG - chr7.2:12159786-12159805 MS.gene061890:CDS 45.0%
!! ATATATTATTAATATTAACT+TGG - chr7.2:12158595-12158614 MS.gene061890:intron 5.0%
!!! AAATTTTAAATTTATTACAT+AGG + chr7.2:12155524-12155543 None:intergenic 5.0%
AAACTCCTCACAACACGCGT+GGG - chr7.2:12155952-12155971 MS.gene061890:CDS 50.0%
AAGTCCTGTGATGAAGCGTG+TGG - chr7.2:12156149-12156168 MS.gene061890:CDS 50.0%
ACAAGCACAGCAACAGAGCA+TGG + chr7.2:12159754-12159773 None:intergenic 50.0%
ACCATTCATCGCGGTTGAAC+CGG + chr7.2:12159465-12159484 None:intergenic 50.0%
AGAGTCCTCTCGTTTCCGTT+TGG - chr7.2:12156079-12156098 MS.gene061890:CDS 50.0%
AGGCCTATAGTCAATTGGGC+CGG - chr7.2:12159509-12159528 MS.gene061890:CDS 50.0%
AGTTCTGCCACCATAGTCGA+CGG + chr7.2:12160464-12160483 None:intergenic 50.0%
ATCGCCTTGCCAGATTCCAT+CGG + chr7.2:12155065-12155084 None:intergenic 50.0%
ATGGTATAACCGCCTTGCTG+GGG - chr7.2:12159480-12159499 MS.gene061890:CDS 50.0%
CAAAGAGGCTCATGAGGTGT+TGG - chr7.2:12159675-12159694 MS.gene061890:CDS 50.0%
CACTACTGGGGTTGTGATGA+AGG + chr7.2:12159152-12159171 None:intergenic 50.0%
CAGTTGCAGTGACCGTTGTA+AGG - chr7.2:12159911-12159930 MS.gene061890:CDS 50.0%
CATACATGCCACGTACTCGA+GGG + chr7.2:12158925-12158944 None:intergenic 50.0%
CATCACAACCCCAGTAGTGA+TGG - chr7.2:12159153-12159172 MS.gene061890:CDS 50.0%
CATGCAGAGTTAGGTCCCAT+AGG - chr7.2:12160503-12160522 MS.gene061890:intron 50.0%
CGAGGATTCGTGCTAAGACT+GGG + chr7.2:12155924-12155943 None:intergenic 50.0%
CGGTTGAACCGGTTGAAGAA+TGG + chr7.2:12159454-12159473 None:intergenic 50.0%
CTGCAGGGTGGAATTCTGTT+AGG - chr7.2:12155586-12155605 MS.gene061890:intron 50.0%
CTGTTAGGACCATCAGCGTT+AGG - chr7.2:12155601-12155620 MS.gene061890:intron 50.0%
CTTGCGACAGATTCTAGCGT+CGG + chr7.2:12155673-12155692 None:intergenic 50.0%
GAAGCAGAGCATGCAGAGTT+AGG - chr7.2:12160494-12160513 MS.gene061890:intron 50.0%
GAATGGTATAACCGCCTTGC+TGG - chr7.2:12159478-12159497 MS.gene061890:CDS 50.0%
GAGGAGTTTCGAAGCAAGTG+TGG - chr7.2:12160329-12160348 MS.gene061890:intron 50.0%
GAGTACGTGGCATGTATGCA+AGG - chr7.2:12158927-12158946 MS.gene061890:intron 50.0%
GAGTCCTCTCGTTTCCGTTT+GGG - chr7.2:12156080-12156099 MS.gene061890:CDS 50.0%
GAGTGCCATAAGGACCAAGA+TGG + chr7.2:12159122-12159141 None:intergenic 50.0%
GATCGTGAGGCTCTTGAGTT+GGG - chr7.2:12159865-12159884 MS.gene061890:CDS 50.0%
GCAATCTACAAACCAGCTCG+TGG - chr7.2:12159175-12159194 MS.gene061890:CDS 50.0%
GCTCTTTCCCACCACTTTCT+TGG - chr7.2:12158124-12158143 MS.gene061890:intron 50.0%
GCTTGTGCTGGGAAGATTCT+GGG - chr7.2:12156477-12156496 MS.gene061890:CDS 50.0%
GGAACAGTGTGACAGATGGT+TGG - chr7.2:12157385-12157404 MS.gene061890:intron 50.0%
GGCGGTTATACCATTCATCG+CGG + chr7.2:12159474-12159493 None:intergenic 50.0%
GTGATTGCAACTGCTTGTGC+TGG - chr7.2:12156465-12156484 MS.gene061890:CDS 50.0%
GTGTTCCTTCCTAACGCTGA+TGG + chr7.2:12155613-12155632 None:intergenic 50.0%
GTTCAACGCGCTCGCAAAAA+CGG - chr7.2:12159424-12159443 MS.gene061890:CDS 50.0%
TACGTGGCATGTATGCAAGG+TGG - chr7.2:12158930-12158949 MS.gene061890:intron 50.0%
TAGGACCATCAGCGTTAGGA+AGG - chr7.2:12155605-12155624 MS.gene061890:intron 50.0%
TAGTGGCAACGTTGTAGAGG+AGG - chr7.2:12160379-12160398 MS.gene061890:intron 50.0%
TCAAGAGCCTCACGATCATC+AGG + chr7.2:12159862-12159881 None:intergenic 50.0%
TCGTGCTAAGACTGGGAATG+CGG + chr7.2:12155917-12155936 None:intergenic 50.0%
TGAAGGCGAAAGCTAGAGAG+CGG + chr7.2:12155150-12155169 None:intergenic 50.0%
TGATCGTGAGGCTCTTGAGT+TGG - chr7.2:12159864-12159883 MS.gene061890:CDS 50.0%
TGCATGGAATGCCCTTCGAT+TGG - chr7.2:12158171-12158190 MS.gene061890:intron 50.0%
TGCTTGTGCTGGGAAGATTC+TGG - chr7.2:12156476-12156495 MS.gene061890:CDS 50.0%
TTGCTGAGGTTTCATCTGGC+AGG - chr7.2:12160648-12160667 MS.gene061890:CDS 50.0%
! ACTCTTTTTGTCTCCGCCGT+CGG + chr7.2:12156064-12156083 None:intergenic 50.0%
! AGAGGGAAAGCGTAATCGAG+AGG + chr7.2:12155091-12155110 None:intergenic 50.0%
! ATCGTGAGGCTCTTGAGTTG+GGG - chr7.2:12159866-12159885 MS.gene061890:CDS 50.0%
! CGGTACTTTTGCCAGGTGAT+TGG + chr7.2:12159981-12160000 None:intergenic 50.0%
! CTAGCGGGTGTAATGGTTTC+AGG - chr7.2:12156228-12156247 MS.gene061890:CDS 50.0%
! GATGGAGAGGTGTGAACCAA+AGG - chr7.2:12159713-12159732 MS.gene061890:CDS 50.0%
! TCAGTGGTGGAAAAGCATGG+GGG - chr7.2:12156430-12156449 MS.gene061890:CDS 50.0%
! TGAGGAGTTTGAGTTCAGCG+AGG + chr7.2:12155942-12155961 None:intergenic 50.0%
! TGGAAAAGCATGGGGGCTAT+TGG - chr7.2:12156437-12156456 MS.gene061890:CDS 50.0%
! TTTGGGCTCAGATGGTAGTG+TGG - chr7.2:12159804-12159823 MS.gene061890:CDS 50.0%
!! AGCGTCGGCATACTCCATTT+AGG + chr7.2:12155658-12155677 None:intergenic 50.0%
!! ATGACTTTAGGTTGGCGGAG+AGG + chr7.2:12155175-12155194 None:intergenic 50.0%
!! CAGCGATGACTTTAGGTTGG+CGG + chr7.2:12155180-12155199 None:intergenic 50.0%
!! CATGAGGTGTTGGAGAATGC+TGG - chr7.2:12159685-12159704 MS.gene061890:CDS 50.0%
!! GGAGTGCTGATGAACACCAA+AGG - chr7.2:12156555-12156574 MS.gene061890:CDS 50.0%
!!! AGCATGGGGGCTATTGGTTT+TGG - chr7.2:12156443-12156462 MS.gene061890:CDS 50.0%
AATGCTGGGCATGGATGGAG+AGG - chr7.2:12159700-12159719 MS.gene061890:CDS 55.0%
AATTGGGCCGGGTCATAGTC+CGG - chr7.2:12159521-12159540 MS.gene061890:CDS 55.0%
ACAACGGTCACTGCAACTGC+CGG + chr7.2:12159910-12159929 None:intergenic 55.0%
AGCACCCAAACGGAAACGAG+AGG + chr7.2:12156087-12156106 None:intergenic 55.0%
AGCGTCAATGGGCCACAAGA+TGG - chr7.2:12160538-12160557 MS.gene061890:CDS 55.0%
AGGTTGGCGGAGAGGTTTGA+AGG + chr7.2:12155167-12155186 None:intergenic 55.0%
CAAACTCCTCACAACACGCG+TGG - chr7.2:12155951-12155970 MS.gene061890:CDS 55.0%
CAACGAAAGCAACTCCGGAG+AGG + chr7.2:12156110-12156129 None:intergenic 55.0%
CTTCCATTCGTCTGCGGCAT+AGG - chr7.2:12155799-12155818 MS.gene061890:CDS 55.0%
GACCCGGCCCAATTGACTAT+AGG + chr7.2:12159515-12159534 None:intergenic 55.0%
GCATACATGCCACGTACTCG+AGG + chr7.2:12158926-12158945 None:intergenic 55.0%
GCGAGGATTCGTGCTAAGAC+TGG + chr7.2:12155925-12155944 None:intergenic 55.0%
GCTTTAGCGATCGCGTTAGC+CGG - chr7.2:12156030-12156049 MS.gene061890:CDS 55.0%
GGCCTATAGTCAATTGGGCC+GGG - chr7.2:12159510-12159529 MS.gene061890:CDS 55.0%
GGCGCAGACAAAGCTGGATT+CGG - chr7.2:12155853-12155872 MS.gene061890:CDS 55.0%
GGTGGCAGAACTAGCAGAGA+GGG - chr7.2:12160472-12160491 MS.gene061890:intron 55.0%
GTGTTGGAGAATGCTGGGCA+TGG - chr7.2:12159691-12159710 MS.gene061890:CDS 55.0%
TCCTCCGATGGAATCTGGCA+AGG - chr7.2:12155058-12155077 MS.gene061890:CDS 55.0%
TGAGCCACACGCTTCATCAC+AGG + chr7.2:12156156-12156175 None:intergenic 55.0%
TGGAGAATGCTGGGCATGGA+TGG - chr7.2:12159695-12159714 MS.gene061890:CDS 55.0%
TGGTGGCAGAACTAGCAGAG+AGG - chr7.2:12160471-12160490 MS.gene061890:intron 55.0%
TGTGGCTCAAAGATGCTCCG+TGG - chr7.2:12156167-12156186 MS.gene061890:CDS 55.0%
TTGGACCGTGGATGCAAGCT+AGG + chr7.2:12159285-12159304 None:intergenic 55.0%
TTTCTCCCACGCGTGTTGTG+AGG + chr7.2:12155960-12155979 None:intergenic 55.0%
! ACCGGTTCAACCGCGATGAA+TGG - chr7.2:12159461-12159480 MS.gene061890:CDS 55.0%
! AGGGAATGTTGGTTGGACCG+TGG + chr7.2:12159297-12159316 None:intergenic 55.0%
! CGAGTCCTAGCTTGCATCCA+CGG - chr7.2:12159277-12159296 MS.gene061890:CDS 55.0%
! GACGGTTTTGCGGAGGACAA+TGG + chr7.2:12155830-12155849 None:intergenic 55.0%
! GGGTAGTGGCAACGTTGTAG+AGG - chr7.2:12160376-12160395 MS.gene061890:intron 55.0%
! TAGTGGACCGGACTATGACC+CGG + chr7.2:12159531-12159550 None:intergenic 55.0%
! TCGGTTTCCGTCGACTATGG+TGG - chr7.2:12160454-12160473 MS.gene061890:intron 55.0%
ACGCCTATGCCGCAGACGAA+TGG + chr7.2:12155805-12155824 None:intergenic 60.0%
AGGCCTGAAAAGCCCCAGCA+AGG + chr7.2:12159495-12159514 None:intergenic 60.0%
CAACGGTCACTGCAACTGCC+GGG + chr7.2:12159909-12159928 None:intergenic 60.0%
CCTGAAAAGCCCCAGCAAGG+CGG + chr7.2:12159492-12159511 None:intergenic 60.0%
CGCGGCTAAGTCGTTGAACG+CGG + chr7.2:12155998-12156017 None:intergenic 60.0%
CGTTCAACGACTTAGCCGCG+TGG - chr7.2:12155998-12156017 MS.gene061890:CDS 60.0%
GCCTTGCCAGATTCCATCGG+AGG + chr7.2:12155062-12155081 None:intergenic 60.0%
GCGATCGCGTTAGCCGGAAA+CGG - chr7.2:12156036-12156055 MS.gene061890:CDS 60.0%
GGCTAAGTCGTTGAACGCGG+CGG + chr7.2:12155995-12156014 None:intergenic 60.0%
GTCCTCCGCAAAACCGTCGA+CGG - chr7.2:12155832-12155851 MS.gene061890:CDS 60.0%
TCCGTTTGGGTGCTCCTCTC+CGG - chr7.2:12156093-12156112 MS.gene061890:CDS 60.0%
TTAGCCGGAAACGGAGCCGA+CGG - chr7.2:12156045-12156064 MS.gene061890:CDS 60.0%
! AGCTTTGTCTGCGCCGTCGA+CGG + chr7.2:12155848-12155867 None:intergenic 60.0%
! GGGTCGGTTTCCGTCGACTA+TGG - chr7.2:12160451-12160470 MS.gene061890:intron 60.0%
!! TCCGGAGAGGAGCACCCAAA+CGG + chr7.2:12156097-12156116 None:intergenic 60.0%
ACGCGTGGGAGAAACCGCCA+TGG - chr7.2:12155966-12155985 MS.gene061890:CDS 65.0%
CTAGAGAGCGGCTGACGACG+AGG + chr7.2:12155138-12155157 None:intergenic 65.0%
GTCGACGGCGCAGACAAAGC+TGG - chr7.2:12155847-12155866 MS.gene061890:CDS 65.0%
! CCGCCTTGCTGGGGCTTTTC+AGG - chr7.2:12159489-12159508 MS.gene061890:CDS 65.0%
! CTGCGCCGTCGACGGTTTTG+CGG + chr7.2:12155840-12155859 None:intergenic 65.0%
! TGGCGGGCCTGATGATCGTG+AGG - chr7.2:12159852-12159871 MS.gene061890:CDS 65.0%
GTTGAACGCGGCGGCTGCCA+TGG + chr7.2:12155986-12156005 None:intergenic 70.0%
! CGCCGTCGACGGTTTTGCGG+AGG + chr7.2:12155837-12155856 None:intergenic 70.0%
!! TCCGCCGTCGGCTCCGTTTC+CGG + chr7.2:12156052-12156071 None:intergenic 70.0%
GAACGCGGCGGCTGCCATGG+CGG + chr7.2:12155983-12156002 None:intergenic 75.0%
GCCGGAAACGGAGCCGACGG+CGG - chr7.2:12156048-12156067 MS.gene061890:CDS 75.0%


Chromosome Type Strat End Strand Name
chr7.2 gene 12155028 12160700 12155028 ID=MS.gene061890
chr7.2 mRNA 12155028 12160700 12155028 ID=MS.gene061890.t1;Parent=MS.gene061890
chr7.2 exon 12160521 12160700 12160521 ID=MS.gene061890.t1.exon1;Parent=MS.gene061890.t1
chr7.2 CDS 12160521 12160700 12160521 ID=cds.MS.gene061890.t1;Parent=MS.gene061890.t1
chr7.2 exon 12159108 12160136 12159108 ID=MS.gene061890.t1.exon2;Parent=MS.gene061890.t1
chr7.2 CDS 12159108 12160136 12159108 ID=cds.MS.gene061890.t1;Parent=MS.gene061890.t1
chr7.2 exon 12155678 12156631 12155678 ID=MS.gene061890.t1.exon3;Parent=MS.gene061890.t1
chr7.2 CDS 12155678 12156631 12155678 ID=cds.MS.gene061890.t1;Parent=MS.gene061890.t1
chr7.2 exon 12155028 12155420 12155028 ID=MS.gene061890.t1.exon4;Parent=MS.gene061890.t1
chr7.2 CDS 12155028 12155420 12155028 ID=cds.MS.gene061890.t1;Parent=MS.gene061890.t1
Gene Sequence

>MS.gene061890

ATGCCGGTAAACATAACCTCAATCAAAACTTCCTCCGATGGAATCTGGCAAGGCGATAATCCTCTCGATTACGCTTTCCCTCTCCTCATTATTCAAACTGTCTTAGTCCTCGTCGTCAGCCGCTCTCTAGCTTTCGCCTTCAAACCTCTCCGCCAACCTAAAGTCATCGCTGAGATCGTCGTATGTACCTCATCATCTTAATTAATTCCTCACATTCAACTTTATTCTACTTAATTTTGCTTATATTTACGGGGTTGTCTGATATGTCTAATATTGTACAGGTTAAAAAGTAGTAAATTTAATATATTTACTATAAAATACATAAGCTGCAAGGCAAACTTACACTTTAAATTTTTTAATATGTTTAAATTTATGCATAATAGAAAAAACTCATATTTGATTACATATCATATCTTATGTTTCTTCCTTTGTGACGATTATAATTATAAGCTAAAACTATTTTTTTACTTTATTGAATTATTAATATATCTGACCTATGTAATAAATTTAAAATTTGTTATTAATTACAATTATGTATGGAGAGTGATTTGCATGTATCTGCAGGGTGGAATTCTGTTAGGACCATCAGCGTTAGGAAGGAACACAAGCTACCTGCACCGTATATTTCCTAAATGGAGTATGCCGACGCTAGAATCTGTCGCAAGCATAGGTCTTCTTTTCTTTCTCTTCCTTGTTGGACTCGAGTTAGATCTAAACTCAATTCGTCGGAGCGGTAAAAGAGCATTCAGTATAGCAGCTTGTGGAATCACTCTTCCATTCGTCTGCGGCATAGGCGTTGCCATTGTCCTCCGCAAAACCGTCGACGGCGCAGACAAAGCTGGATTCGGTCAATTCATCGTTTTCATGGGAGTTGCGCTTTCTATAACCGCATTCCCAGTCTTAGCACGAATCCTCGCTGAACTCAAACTCCTCACAACACGCGTGGGAGAAACCGCCATGGCAGCCGCCGCGTTCAACGACTTAGCCGCGTGGATTCTACTCGCTTTAGCGATCGCGTTAGCCGGAAACGGAGCCGACGGCGGAGACAAAAAGAGTCCTCTCGTTTCCGTTTGGGTGCTCCTCTCCGGAGTTGCTTTCGTTGCTTTCATGATGATTGTTATAAGTCCTGTGATGAAGCGTGTGGCTCAAAGATGCTCCGTGGAGAATGAAGCTGTTGATGAAGTTTATATTTGTTTGACTCTAGCGGGTGTAATGGTTTCAGGATTCATAACAGATTTCATAGGGATTCACTCGATTTTTGGGGCGTTTGTTTTTGGATTAACTATTCCAAAGACAGGTAATTTTGCGGAGAGGTTGATAGAGAGAATAGAGGATTTTGTTTTGGGGTTGTTGCTTCCACTTTACTTTGCTTCGAGTGGTTTGAAAACTGATGTGACTAAAATCAGTGGTGGAAAAGCATGGGGGCTATTGGTTTTGGTGATTGCAACTGCTTGTGCTGGGAAGATTCTGGGTACTTTTGTTGTTGCAATGATGTGTAGGATGCCAGTTAGAGAGTCAATTACACTTGGAGTGCTGATGAACACCAAAGGACTTGTTGAACTCATTGTGCTTAACATCGGAAAAGAGAAAAAGGTCAGTTTCTTTGATTTTTTTTTTCTTCTCTATTTTTTTATTTTCAACTATTATTCATTTAATTAGTTCACTAATTGTTACGTATACATTTTATAAAATAAATAATATCATAACAATACGCTCCATATTATTATTAGTATTCTTTAAAAAAAATATTTATTATTAGTATCAAGTTGAAAAAATAAATTTTCAACAATACCTTGATTGGTATGTGTAGACTGTAGTTGTAGGTCCGAACTCTGAACATGAATTTATCATAGTTGTTGAGTTCGAGATTTTATGATAAAAGTAGGAGGCAGAAAAGATTTAACTGAAGATAGGGAATTTGTTAGAAATAATTCTCATATTAAATAATTACTATATGTGTATTGTGAAAGAAAAGTTCATCTATATAACGCCTTTAAAAAATGGGAAAAAATATACATTAAGTCATAATTCACATTACTAGATGTGTTTTGTTTCAAAGAAATTCTTTATTGATGCTATCAAATTTGAACACATCATTAAACAAAGGAGTATTTTAGAAACATTATTGGAAAAATTAATATTATACATACATAAACTATATATTTTTATACATGTGAAAATTACAAAAATATAATATTATAATTAGAGATAAAGAGAGTAAAAATTCCTCTAAAAAAAGATAGTAAAATTTGGTTAAAGATTTTAGTGGTGAGGATATATGCTGTAAAAAAAGTGGTGAGGATATAGAAGCTTGATTCTGGTTAATTAAGAAAAAGTGCGACTTGTGTCCAAAAAAAGGAACAGTGTGACAGATGGTTGGCCTTTTATTGATTTGGTGGGTCGGCTTGACAGTTCTATAATACAAATATAAAGTATACAAAACAAAATTGGAACGTGTCCACATGAAAAGTTGAACGATGTGTGCAAAGTTAAAATTTGTATTCATAAGCAACTTATTTGACTTGGTATATTTTATGTTAGTTTCAATTACAGTATCTTAGTGTATTATTGGAAAATAATGTCATGTGGTTGACAAATTTGGGATTGTTTTGCTGCAATTGGCTTGGCAGCCGTGTTGAATAAAGTTAGGAAGTTGAAGTTAGATACTTAGATGAAAATATACGACTAGTCGTCTAGTCCAATTGCATGAACTCTAATTTTCTTGTGATTTTCTTTCTGGCCATTAATTGATTAGTGATAATGGTTTCTGTTTCATATGAATATGAATCTCGTGAATAAACTTAGGTGGTTGCCTTCTTTAGTATCTTTTCTACTTTTCCATGCCTATCTTGCATTTAGTATATGCTTTTTGATCAAATCATAGCATTATGAGTCCTTGCTATCAAAACAAGAAATGAAACACTTTAATTTTAAGCCGGTCATAAATTAGCTAGGAAGCTAAGTTTGATCAGTCCATTTAAATTACTTGTACTAATTTACTCTCTCTTAATGGGATGGCGTGTTAACTTTGATTATCCTATCCTATTTTACTAGAAAAGTAATATTGCTAAGAGAAGTCTAGTCTCCACAATATGAGCTCTTTCCCACCACTTTCTTGGGTTGTAATAATGTTTGTTTACATGTGCATGGAATGCCCTTCGATTGGCTTATAGAATCAGCATCAATTGATTATTATATTCTTGTTTCCATAGTTTCTAATGAGTTCCACCATACCATAAAAATATTGATGATTCACTGTCACGAAAAAATAAGTTAGTAAAAGATACATAAAGAGAAATATGAAATTTATCTGTAATACAATCACTAAATTTAGTGACGTAAAAACTAAAGATATATTTTTTTTTCTCTACTGATTATATTATTTCTATGATAAAGAAAAATATTTTTTGACATGAAAGTAATTATATTATACCTATCAAGGCTTGCCTATATAAAAAAAAACATATCAGTGCTATTATTGGTTTGTTTTTGGATAAGTCGTTCCCAATCTAATAATTTTCAATTTGTCATTTTGTCTTAGGCAAATAATAGGAGTTGACTATTATTATATATTATTAATATTAACTTGGCTGGGTAGCTTGACTATTAGTATAGAGAATAAACATCCTGCCTGGTGTCAAATTTTTGCTAATCATAGCACAGAACAAATATATTTTACTTAACCTATGGTGATTAATTTTCTTTTGCAGATGCATCAAAACTAATGAAAGATATTAGAATTAGAAATATAATCTAATGTTGCATATACATGACACGTATACAATACCTTTTTTTTTAAAGAGACAGTACATATAGATGAGAAACTCCATATAGATTAAACAAATCATTCATTTATTCATATTTTTATTGGAATATGGTCCAATAAAAATGAATCCCTCGAGTACGTGGCATGTATGCAAGGTGGCAATGACATTTTCATTTACAAAATACATCCCTTCCGTTTACCTTTATTTTGGGGTACAGTCCCCTTCAGTTTTATATCTGAAGTAATTGTATTATCGAATGTTATAATTTAATTAGATGCTTTTTTTACTGGACTAAATTACAGGTTTTAAATGATGAAATATTTGCCATCTTGGTCCTTATGGCACTCTTCACAACCTTCATCACAACCCCAGTAGTGATGGCAATCTACAAACCAGCTCGTGGAATCGTAACTAAGACAATTCGAAAGCTAGGTGACATGTCCTCCCACTCTAAAGAAAACAACAATGTGGTGAATACTCTTCGAGTCCTAGCTTGCATCCACGGTCCAACCAACATTCCCTCTATCATCAACCTCATTGAGTCAACACGTAGCACCCAAAAATCACTTCTCAAAGTCTTCATCATGCACCTTGTTGAACTCACAGAACGTTCATCTTCAATCATCATGGTTCAACGCGCTCGCAAAAACGGTTTTCCATTCTTCAACCGGTTCAACCGCGATGAATGGTATAACCGCCTTGCTGGGGCTTTTCAGGCCTATAGTCAATTGGGCCGGGTCATAGTCCGGTCCACTACAGCCATATCTTCTCTATCTACAATGCACGAGGATATATGCCACATAGCAGAGGAAAAGAGAGTGACAATGATCATATTACCCTTCCACAAACATTGGAGGATGGAAGTTGATGACGAAAATGACAAAGAGGCTCATGAGGTGTTGGAGAATGCTGGGCATGGATGGAGAGGTGTGAACCAAAGGGTACTAAAGAATGCTCCATGCTCTGTTGCTGTGCTTGTAGATAGAGGATATGGGCTTGGGTTGAAGAATTTGGGCTCAGATGGTAGTGTGGCCCAAAGAATATGCATCGTGTTTTTTGGCGGGCCTGATGATCGTGAGGCTCTTGAGTTGGGGAAGAAAATGGTTGAACACCCGGCAGTTGCAGTGACCGTTGTAAGGTTCGTTGATCAAAATGAATTGAGTGGTAACAACTTTGTTTTACGCCAATCACCTGGCAAAAGTACCGACGAAAACTATAGCTTCTCCATCGCAAAAATTAATCGACAAAAAGAACAGGTATTGTTCTAACAAAATAACTAAATTATGCTTTGACCATAGTGATTTAATTTAATGGCTTAAATATGTTATTAGTCACATTTTGAGAAAATTATTCTTGAGACTAATAAACATATTTCAGCTAAGCTTAAATATGTTATTGGTCACATTTTTTCTTAAACAAATCAACTTGCATACTTGCTTATGTCTTATCGTATATATGCACGATACGAATTTTTTTTTTTTTTTTTATAAACATTGCTATTGATTAAATGCAGGTGTTGGATGAAAATGCAATGGAGGAGTTTCGAAGCAAGTGTGGTGAAACAGTGAAGTATATCGAAAAGGGTAGTGGCAACGTTGTAGAGGAGGTGATAGCATTAGGAGAAAGTGCAGATTACGATCTCATAGTTGTTGGGAAGGGTCGGTTTCCGTCGACTATGGTGGCAGAACTAGCAGAGAGGGAAGCAGAGCATGCAGAGTTAGGTCCCATAGGAGATATACTTACAGCGTCAATGGGCCACAAGATGGTGTCATCAGTTCTTGTTATTCAACAACATGATGTAGCATTGACAGAGGATGCACCAATGTACAAGGTTAAGGTGCATGATGAGAATGTTGCTGAGGTTTCATCTGGCAGGCATGAGATCTCTATAGCAAATGCAGTGTAA
Protein sequence

>MS.gene061890.t1

MPVNITSIKTSSDGIWQGDNPLDYAFPLLIIQTVLVLVVSRSLAFAFKPLRQPKVIAEIVGGILLGPSALGRNTSYLHRIFPKWSMPTLESVASIGLLFFLFLVGLELDLNSIRRSGKRAFSIAACGITLPFVCGIGVAIVLRKTVDGADKAGFGQFIVFMGVALSITAFPVLARILAELKLLTTRVGETAMAAAAFNDLAAWILLALAIALAGNGADGGDKKSPLVSVWVLLSGVAFVAFMMIVISPVMKRVAQRCSVENEAVDEVYICLTLAGVMVSGFITDFIGIHSIFGAFVFGLTIPKTGNFAERLIERIEDFVLGLLLPLYFASSGLKTDVTKISGGKAWGLLVLVIATACAGKILGTFVVAMMCRMPVRESITLGVLMNTKGLVELIVLNIGKEKKVLNDEIFAILVLMALFTTFITTPVVMAIYKPARGIVTKTIRKLGDMSSHSKENNNVVNTLRVLACIHGPTNIPSIINLIESTRSTQKSLLKVFIMHLVELTERSSSIIMVQRARKNGFPFFNRFNRDEWYNRLAGAFQAYSQLGRVIVRSTTAISSLSTMHEDICHIAEEKRVTMIILPFHKHWRMEVDDENDKEAHEVLENAGHGWRGVNQRVLKNAPCSVAVLVDRGYGLGLKNLGSDGSVAQRICIVFFGGPDDREALELGKKMVEHPAVAVTVVRFVDQNELSGNNFVLRQSPGKSTDENYSFSIAKINRQKEQVLDENAMEEFRSKCGETVKYIEKGSGNVVEEVIALGESADYDLIVVGKGRFPSTMVAELAEREAEHAELGPIGDILTASMGHKMVSSVLVIQQHDVALTEDAPMYKVKVHDENVAEVSSGRHEISIANAV