Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene024961.t1 | RHN53237.1 | 96.6 | 626 | 6 | 2 | 1 | 611 | 1 | 626 | 0.00E+00 | 1268.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene024961.t1 | P93484 | 91.9 | 621 | 33 | 3 | 5 | 610 | 4 | 622 | 0.0e+00 | 1203.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene024961.t1 | A0A396HQY9 | 96.6 | 626 | 6 | 2 | 1 | 611 | 1 | 626 | 0.0e+00 | 1268.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene024961 | MS.gene40526 | PPI |
| MS.gene44056 | MS.gene024961 | PPI |
| MS.gene024961 | MS.gene046942 | PPI |
| MS.gene024961 | MS.gene52620 | PPI |
| MS.gene96690 | MS.gene024961 | PPI |
| MS.gene046942 | MS.gene024961 | PPI |
| MS.gene024961 | MS.gene71616 | PPI |
| MS.gene024961 | MS.gene91307 | PPI |
| MS.gene024961 | MS.gene92358 | PPI |
| MS.gene024961 | MS.gene91547 | PPI |
| MS.gene024961 | MS.gene005189 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene024961.t1 | MTR_5g005100 | 95.367 | 626 | 10 | 3 | 1 | 611 | 1 | 622 | 0.0 | 1224 |
| MS.gene024961.t1 | MTR_1g106940 | 86.535 | 609 | 68 | 3 | 17 | 611 | 24 | 632 | 0.0 | 1104 |
| MS.gene024961.t1 | MTR_1g106940 | 87.652 | 494 | 49 | 2 | 17 | 498 | 24 | 517 | 0.0 | 905 |
| MS.gene024961.t1 | MTR_8g005800 | 64.630 | 622 | 203 | 5 | 1 | 608 | 5 | 623 | 0.0 | 861 |
| MS.gene024961.t1 | MTR_7g073350 | 64.851 | 606 | 193 | 5 | 19 | 608 | 22 | 623 | 0.0 | 839 |
| MS.gene024961.t1 | MTR_2g437910 | 62.007 | 608 | 215 | 4 | 7 | 602 | 8 | 611 | 0.0 | 780 |
| MS.gene024961.t1 | MTR_3g101430 | 76.190 | 42 | 10 | 0 | 19 | 60 | 2 | 43 | 7.26e-16 | 73.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene024961.t1 | AT2G14740 | 82.645 | 605 | 93 | 2 | 19 | 611 | 24 | 628 | 0.0 | 1066 |
| MS.gene024961.t1 | AT2G14740 | 82.645 | 605 | 93 | 2 | 19 | 611 | 24 | 628 | 0.0 | 1066 |
| MS.gene024961.t1 | AT2G14720 | 81.743 | 608 | 99 | 2 | 16 | 611 | 21 | 628 | 0.0 | 1058 |
| MS.gene024961.t1 | AT2G14720 | 81.743 | 608 | 99 | 2 | 16 | 611 | 21 | 628 | 0.0 | 1058 |
| MS.gene024961.t1 | AT3G52850 | 69.305 | 619 | 174 | 5 | 4 | 609 | 5 | 620 | 0.0 | 896 |
| MS.gene024961.t1 | AT2G30290 | 65.025 | 609 | 198 | 4 | 4 | 598 | 6 | 613 | 0.0 | 866 |
| MS.gene024961.t1 | AT2G30290 | 65.025 | 609 | 198 | 4 | 4 | 598 | 6 | 613 | 0.0 | 865 |
| MS.gene024961.t1 | AT4G20110 | 60.645 | 620 | 219 | 7 | 6 | 606 | 7 | 620 | 0.0 | 795 |
| MS.gene024961.t1 | AT1G30900 | 60.963 | 602 | 218 | 5 | 9 | 599 | 15 | 610 | 0.0 | 784 |
| MS.gene024961.t1 | AT4G20110 | 59.776 | 624 | 221 | 9 | 6 | 606 | 7 | 623 | 0.0 | 780 |
| MS.gene024961.t1 | AT2G34940 | 57.355 | 605 | 240 | 5 | 7 | 600 | 14 | 611 | 0.0 | 738 |
Find 151 sgRNAs with CRISPR-Local
Find 287 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGTGTACAAATATAGAATT+AGG | 0.152074 | 5.3:-501660 | MS.gene024961:CDS |
| ACAATACCCTCTGCTCTTAT+TGG | 0.161645 | 5.3:-504322 | MS.gene024961:CDS |
| CTTTGATGATTGACGTGATT+TGG | 0.258850 | 5.3:+501411 | None:intergenic |
| ATCTTGCTCTTCTTTCAAAA+TGG | 0.266286 | 5.3:+503611 | None:intergenic |
| TCAGTACTGTTTATGTTAGT+TGG | 0.267130 | 5.3:-504972 | MS.gene024961:CDS |
| GTTTCTTTGCTTTGAAGGTT+TGG | 0.273783 | 5.3:-504462 | MS.gene024961:CDS |
| CAACCCTTATTGTTATCTTT+AGG | 0.286744 | 5.3:+504807 | None:intergenic |
| TGCCATTAGTGCTGGGGATA+TGG | 0.300176 | 5.3:-504272 | MS.gene024961:CDS |
| GAACTTCTGCTTGGCTGTCC+AGG | 0.305137 | 5.3:+501433 | None:intergenic |
| CAGTGTCCTACAGGGTTTAA+AGG | 0.310747 | 5.3:-502571 | MS.gene024961:CDS |
| CAGAAAATGCATGTCCGTTC+CGG | 0.315826 | 5.3:+502741 | None:intergenic |
| TGAGGAGCCCTTGATTACTA+TGG | 0.317046 | 5.3:-504392 | MS.gene024961:CDS |
| GACAGTACCATGTTATATAA+TGG | 0.319024 | 5.3:+504068 | None:intergenic |
| ATTGGCTTGGGTATGATTGC+TGG | 0.324545 | 5.3:-501694 | MS.gene024961:CDS |
| AGATTGTTTCTTTGCTTTGA+AGG | 0.325371 | 5.3:-504467 | MS.gene024961:CDS |
| GTGTTTGCAGTCGGTGGACC+TGG | 0.328777 | 5.3:-502803 | MS.gene024961:intron |
| TTATCCTAAAGATAACAATA+AGG | 0.350659 | 5.3:-504811 | MS.gene024961:CDS |
| GACAACAAGAGTAGGTAATA+TGG | 0.353003 | 5.3:+503457 | None:intergenic |
| ACAGTACCATGTTATATAAT+GGG | 0.356620 | 5.3:+504069 | None:intergenic |
| GGCTATTTGTTCTGGATTTG+AGG | 0.358996 | 5.3:-503387 | MS.gene024961:CDS |
| GACCATATCCCCAGCACTAA+TGG | 0.375726 | 5.3:+504270 | None:intergenic |
| TCTCCCATGGTTTATGCATT+GGG | 0.390836 | 5.3:+504012 | None:intergenic |
| ATCTCCCATGGTTTATGCAT+TGG | 0.396833 | 5.3:+504011 | None:intergenic |
| AACTTCTGCTTGGCTGTCCA+GGG | 0.402153 | 5.3:+501434 | None:intergenic |
| GACAGTGCGATCGGTAACTT+TGG | 0.403999 | 5.3:-504873 | MS.gene024961:CDS |
| TATCCTAAAGATAACAATAA+GGG | 0.408259 | 5.3:-504810 | MS.gene024961:CDS |
| AGAAAATGCATGTCCGTTCC+GGG | 0.412062 | 5.3:+502742 | None:intergenic |
| TCCACACTCATCGTTACTAT+TGG | 0.418802 | 5.3:+504180 | None:intergenic |
| TGTATACAACTCACTTATAC+AGG | 0.418882 | 5.3:+501872 | None:intergenic |
| AGCAGATGAGACATCCTCTT+CGG | 0.422782 | 5.3:+504363 | None:intergenic |
| AGCACCAGGTTTGGATTTGA+AGG | 0.425579 | 5.3:+504761 | None:intergenic |
| CAGTACTGTTTATGTTAGTT+GGG | 0.425701 | 5.3:-504971 | MS.gene024961:CDS |
| TACAGGTAAAACTGCCAGTC+AGG | 0.431110 | 5.3:-501752 | MS.gene024961:intron |
| GACTTCAGCACAGGCTATGA+TGG | 0.431165 | 5.3:-503965 | MS.gene024961:CDS |
| GTTAAATGCCAGTGTCCTAC+AGG | 0.432639 | 5.3:-502580 | MS.gene024961:CDS |
| CTGAAGTCCTGCTCAGGATC+CGG | 0.438824 | 5.3:+503980 | None:intergenic |
| GGTAGGAAGAGCACCAGGTT+TGG | 0.440524 | 5.3:+504752 | None:intergenic |
| TTGGGTATGATTGCTGGAGG+GGG | 0.442632 | 5.3:-501688 | MS.gene024961:CDS |
| CTTGGGTATGATTGCTGGAG+GGG | 0.451243 | 5.3:-501689 | MS.gene024961:CDS |
| GCAGATGAGACATCCTCTTC+GGG | 0.459853 | 5.3:+504364 | None:intergenic |
| TTGAAGGATGCCATTAGTGC+TGG | 0.462509 | 5.3:-504280 | MS.gene024961:CDS |
| CGTGATTTGGAACTTCTGCT+TGG | 0.463555 | 5.3:+501424 | None:intergenic |
| GTTTGGAATGCTCAGAAGGC+TGG | 0.467555 | 5.3:-504445 | MS.gene024961:CDS |
| CCAGTCAGGCAAAATCCACT+TGG | 0.469198 | 5.3:-501738 | MS.gene024961:CDS |
| CAAAAGAAACCGAAAAGCCT+TGG | 0.473973 | 5.3:-503892 | MS.gene024961:CDS |
| TCATACTCGACACGATCATC+AGG | 0.477928 | 5.3:+504211 | None:intergenic |
| TCAAATTAGATGCCCGATGA+AGG | 0.478586 | 5.3:-503843 | MS.gene024961:CDS |
| CAATACGGTGGTAGCATGGC+TGG | 0.479746 | 5.3:-504843 | MS.gene024961:CDS |
| ACAGTGCGATCGGTAACTTT+GGG | 0.480816 | 5.3:-504872 | MS.gene024961:CDS |
| CCATTGCTCAAACAAACAGC+TGG | 0.487515 | 5.3:+503353 | None:intergenic |
| GGGTGTGTCCATAGTAATCA+AGG | 0.488151 | 5.3:+504384 | None:intergenic |
| TGGTCAATGTTAATCTTGAC+TGG | 0.491505 | 5.3:-504252 | MS.gene024961:CDS |
| GAAGGTTTGGAATGCTCAGA+AGG | 0.501562 | 5.3:-504449 | MS.gene024961:CDS |
| TTCTGAAATCAGAGCAATCA+TGG | 0.503663 | 5.3:-501469 | MS.gene024961:CDS |
| AAAAGAAACCGAAAAGCCTT+GGG | 0.504812 | 5.3:-503891 | MS.gene024961:CDS |
| GTAACTAACTTCCACGATCA+AGG | 0.505995 | 5.3:+504721 | None:intergenic |
| TGTGTACAAATATAGAATTA+GGG | 0.507429 | 5.3:-501659 | MS.gene024961:intron |
| GTCGATGGTGTTCAATTCAA+AGG | 0.507677 | 5.3:-503045 | MS.gene024961:CDS |
| GCTTGGGTATGATTGCTGGA+GGG | 0.509710 | 5.3:-501690 | MS.gene024961:CDS |
| AATGCCGTCATTAAATCTCT+TGG | 0.510279 | 5.3:-503794 | MS.gene024961:intron |
| GGCTTGGGTATGATTGCTGG+AGG | 0.513936 | 5.3:-501691 | MS.gene024961:CDS |
| TTGCGCTCCGGATCCTGAGC+AGG | 0.517442 | 5.3:-503987 | MS.gene024961:CDS |
| ACTTCACCTGATAAAATCAA+AGG | 0.519263 | 5.3:-504903 | MS.gene024961:CDS |
| AAACAACGGTGGTTGTTGGC+AGG | 0.520508 | 5.3:-503222 | MS.gene024961:CDS |
| TTGTTGATCTTGCAACGCCC+AGG | 0.522495 | 5.3:+502785 | None:intergenic |
| ATGTGGTTGTTGAAAATTTG+AGG | 0.522629 | 5.3:-503937 | MS.gene024961:CDS |
| AGAACAAATAGCCTTTAAAA+CGG | 0.523531 | 5.3:+503397 | None:intergenic |
| TCTTCCTTCAAATCCAAACC+TGG | 0.527152 | 5.3:-504765 | MS.gene024961:CDS |
| AACTTTGGGATTCCTCAATA+CGG | 0.529300 | 5.3:-504858 | MS.gene024961:CDS |
| CCGAAAAGCCTTGGGTGTGG+TGG | 0.530784 | 5.3:-503883 | MS.gene024961:CDS |
| TGAAGGATGCCATTAGTGCT+GGG | 0.532526 | 5.3:-504279 | MS.gene024961:CDS |
| GATGTCAACGGCGAGATTCG+TGG | 0.533817 | 5.3:-504949 | MS.gene024961:CDS |
| CCTGTGCTGAAGTCCTGCTC+AGG | 0.540657 | 5.3:+503974 | None:intergenic |
| TGGAGATCTTCTGTATATCA+AGG | 0.544120 | 5.3:-501904 | MS.gene024961:CDS |
| TCCTCAATACGGTGGTAGCA+TGG | 0.544648 | 5.3:-504847 | MS.gene024961:CDS |
| TGCAAAGATTGACAAGTGCA+TGG | 0.545637 | 5.3:-503661 | MS.gene024961:CDS |
| ACTCACTTATACAGGTATCA+TGG | 0.546171 | 5.3:+501880 | None:intergenic |
| CTTCACCTGATAAAATCAAA+GGG | 0.549712 | 5.3:-504902 | MS.gene024961:CDS |
| GAGGATGTTGGCATGATGCC+CGG | 0.553226 | 5.3:-502760 | MS.gene024961:CDS |
| GCCATGCTACCACCGTATTG+AGG | 0.554564 | 5.3:+504846 | None:intergenic |
| CTGTTATTGACAACAAGAGT+AGG | 0.558861 | 5.3:+503449 | None:intergenic |
| GGTGGAGAAGAACAGCTTGT+CGG | 0.558947 | 5.3:-504928 | MS.gene024961:CDS |
| TGACAAACAACGGTGGTTGT+TGG | 0.559077 | 5.3:-503226 | MS.gene024961:CDS |
| CCTGAGCAGGACTTCAGCAC+AGG | 0.560984 | 5.3:-503974 | MS.gene024961:CDS |
| ACTCGTTGCCGATGATATTG+AGG | 0.563097 | 5.3:-504410 | MS.gene024961:CDS |
| AGCTAATATCACTGCATGCA+AGG | 0.568003 | 5.3:-503192 | MS.gene024961:intron |
| CCTACAGGGTTTAAAGGTGA+TGG | 0.569016 | 5.3:-502565 | MS.gene024961:CDS |
| GCAGCACAGATCTTAGAGAA+AGG | 0.570785 | 5.3:-504112 | MS.gene024961:CDS |
| TGTTTGCAGTCGGTGGACCT+GGG | 0.574779 | 5.3:-502802 | MS.gene024961:intron |
| ACTTCAGCACAGGCTATGAT+GGG | 0.575024 | 5.3:-503964 | MS.gene024961:CDS |
| AGATCAACAATGGAGGATGT+TGG | 0.577792 | 5.3:-502772 | MS.gene024961:CDS |
| CGAAAAGCCTTGGGTGTGGT+GGG | 0.579998 | 5.3:-503882 | MS.gene024961:CDS |
| GGTGTTCAATTCAAAGGAGA+CGG | 0.581086 | 5.3:-503039 | MS.gene024961:CDS |
| AGCTATGACTGCAGTTGTAG+TGG | 0.582229 | 5.3:-501924 | MS.gene024961:CDS |
| CAAGGGCTCCTCAATATCAT+CGG | 0.583903 | 5.3:+504402 | None:intergenic |
| CCATGGGAGATATTGCGCTC+CGG | 0.584021 | 5.3:-503999 | MS.gene024961:CDS |
| GAATTGAACACCATCGACCA+AGG | 0.587042 | 5.3:+503050 | None:intergenic |
| TTGTTGTGTAAACAGGATGA+TGG | 0.587216 | 5.3:-502607 | MS.gene024961:intron |
| ACTTCTGCTTGGCTGTCCAG+GGG | 0.591243 | 5.3:+501435 | None:intergenic |
| CTTTAAACCCTGTAGGACAC+TGG | 0.592362 | 5.3:+502572 | None:intergenic |
| ACCATCCTTCTCCTTGATCG+TGG | 0.593790 | 5.3:-504732 | MS.gene024961:CDS |
| CCAGCTGTTTGTTTGAGCAA+TGG | 0.595530 | 5.3:-503353 | MS.gene024961:intron |
| GGGAAACATGACAGTGCGAT+CGG | 0.595812 | 5.3:-504882 | MS.gene024961:CDS |
| GCGAGTATGTGAATGCCCCT+TGG | 0.597573 | 5.3:-503067 | MS.gene024961:CDS |
| AATTGAACACCATCGACCAA+GGG | 0.597989 | 5.3:+503051 | None:intergenic |
| CATGGCACAATATATGCCCC+TGG | 0.598457 | 5.3:-501451 | MS.gene024961:CDS |
| TATGTTAGTTGGGATGTCAA+CGG | 0.599268 | 5.3:-504961 | MS.gene024961:CDS |
| CCGGAGCGCAATATCTCCCA+TGG | 0.600947 | 5.3:+503999 | None:intergenic |
| TAATTCTATATTTGTACACA+AGG | 0.601328 | 5.3:+501662 | None:intergenic |
| ATCTGCCAGGATACATTCCG+TGG | 0.601733 | 5.3:-503090 | MS.gene024961:intron |
| GCAAAGATTGACAAGTGCAT+GGG | 0.604142 | 5.3:-503660 | MS.gene024961:CDS |
| AAACCGAAAAGCCTTGGGTG+TGG | 0.605855 | 5.3:-503886 | MS.gene024961:CDS |
| AACTTCCACGATCAAGGAGA+AGG | 0.607585 | 5.3:+504727 | None:intergenic |
| GACGGTTATACAACTTGTGA+AGG | 0.609305 | 5.3:-503021 | MS.gene024961:intron |
| CGATCAAGGAGAAGGATGGT+AGG | 0.611973 | 5.3:+504735 | None:intergenic |
| TACTATGGACACACCCGAAG+AGG | 0.615995 | 5.3:-504377 | MS.gene024961:CDS |
| TGTGAATGCCCCTTGGTCGA+TGG | 0.619926 | 5.3:-503060 | MS.gene024961:CDS |
| CATTGCTCAAACAAACAGCT+GGG | 0.621538 | 5.3:+503354 | None:intergenic |
| AGGATGGTAGGAAGAGCACC+AGG | 0.624048 | 5.3:+504747 | None:intergenic |
| CAGTCAGGCAAAATCCACTT+GGG | 0.624354 | 5.3:-501737 | MS.gene024961:CDS |
| AAGTCCCAATGCATAAACCA+TGG | 0.629265 | 5.3:-504016 | MS.gene024961:CDS |
| TCGACACGATCATCAGGATG+AGG | 0.631218 | 5.3:+504217 | None:intergenic |
| TCAGAAGGCTGGAGCTTCTG+CGG | 0.634092 | 5.3:-504434 | MS.gene024961:CDS |
| TGTTAATCTTGACTGGAGAG+AGG | 0.634616 | 5.3:-504245 | MS.gene024961:CDS |
| GGGCGTTGCAAGATCAACAA+TGG | 0.636889 | 5.3:-502782 | MS.gene024961:CDS |
| GGCATTCACATACTCGCCCA+CGG | 0.638497 | 5.3:+503073 | None:intergenic |
| ACATAGTCCCACCACACCCA+AGG | 0.638979 | 5.3:+503875 | None:intergenic |
| AGTCCCAATGCATAAACCAT+GGG | 0.639703 | 5.3:-504015 | MS.gene024961:CDS |
| TGTTGGCATGATGCCCGGAA+CGG | 0.640813 | 5.3:-502755 | MS.gene024961:CDS |
| CAGTACCATGTTATATAATG+GGG | 0.643079 | 5.3:+504070 | None:intergenic |
| TTACACCCCATTATATAACA+TGG | 0.646628 | 5.3:-504075 | MS.gene024961:CDS |
| TCCACGATCAAGGAGAAGGA+TGG | 0.649403 | 5.3:+504731 | None:intergenic |
| TTAAATGCCAGTGTCCTACA+GGG | 0.651425 | 5.3:-502579 | MS.gene024961:CDS |
| GAAGGATGCCATTAGTGCTG+GGG | 0.652649 | 5.3:-504278 | MS.gene024961:CDS |
| AATGAGTGCTTGACAAACAA+CGG | 0.653519 | 5.3:-503236 | MS.gene024961:CDS |
| GCACAGATCTTAGAGAAAGG+AGG | 0.654803 | 5.3:-504109 | MS.gene024961:CDS |
| CCATCACCTTTAAACCCTGT+AGG | 0.658035 | 5.3:+502565 | None:intergenic |
| CGTTGCAAGATCAACAATGG+AGG | 0.658097 | 5.3:-502779 | MS.gene024961:CDS |
| GGTGTGTCCATAGTAATCAA+GGG | 0.660123 | 5.3:+504385 | None:intergenic |
| ACCAATAGTAACGATGAGTG+TGG | 0.674003 | 5.3:-504181 | MS.gene024961:CDS |
| TTACTCAATGTAAACGCGTG+AGG | 0.679088 | 5.3:+504046 | None:intergenic |
| TCTGCCAGGATACATTCCGT+GGG | 0.680496 | 5.3:-503089 | MS.gene024961:intron |
| TTGTGTAAACAGGATGATGG+AGG | 0.686610 | 5.3:-502604 | MS.gene024961:intron |
| TTTGGGATTCCTCAATACGG+TGG | 0.689306 | 5.3:-504855 | MS.gene024961:CDS |
| CTGACCAAGAGATTTAATGA+CGG | 0.696138 | 5.3:+503790 | None:intergenic |
| GTCAACGGCGAGATTCGTGG+TGG | 0.699652 | 5.3:-504946 | MS.gene024961:CDS |
| ATTGAACACCATCGACCAAG+GGG | 0.700315 | 5.3:+503052 | None:intergenic |
| AGGCTATGATGGGAAAGATG+TGG | 0.711715 | 5.3:-503954 | MS.gene024961:CDS |
| ATCGTGTCGAGTATGAGTTG+TGG | 0.711953 | 5.3:-504204 | MS.gene024961:CDS |
| TAGATTGGGAAGGGATCACG+CGG | 0.718440 | 5.3:-503488 | MS.gene024961:CDS |
| GAGTGCTTGACAAACAACGG+TGG | 0.815477 | 5.3:-503233 | MS.gene024961:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATGAAATAATAAATTTGT+TGG | - | chr5.3:504883-504902 | MS.gene024961:CDS | 10.0% |
| !! | AATATTATTAATAGAATTGA+TGG | - | chr5.3:504062-504081 | MS.gene024961:CDS | 10.0% |
| !! | TTAGTAACTATTAAATTTAT+TGG | - | chr5.3:503688-503707 | MS.gene024961:intron | 10.0% |
| !!! | ATTTTAAATGAAATAAAGTT+TGG | + | chr5.3:503714-503733 | None:intergenic | 10.0% |
| !! | AAAATATTAAAAACAGAATG+AGG | + | chr5.3:503981-504000 | None:intergenic | 15.0% |
| !! | AGATAAACATAATAAGAATA+TGG | + | chr5.3:502702-502721 | None:intergenic | 15.0% |
| !! | TAAACTAAAAGCAATTATAA+AGG | + | chr5.3:502825-502844 | None:intergenic | 15.0% |
| !!! | AATTCCAAATTTTTTTATAG+TGG | + | chr5.3:504351-504370 | None:intergenic | 15.0% |
| !!! | TAAAATGTTTGTAGTTTTAT+TGG | - | chr5.3:503728-503747 | MS.gene024961:intron | 15.0% |
| !!! | TTTTCCACTATAAAAAAATT+TGG | - | chr5.3:504344-504363 | MS.gene024961:CDS | 15.0% |
| !! | AGTAATTCAGTTTCTAATTT+GGG | + | chr5.3:503763-503782 | None:intergenic | 20.0% |
| !! | ATTTAACATTGTAAGAACAT+AGG | + | chr5.3:503287-503306 | None:intergenic | 20.0% |
| !! | TAATTCTATATTTGTACACA+AGG | + | chr5.3:504738-504757 | None:intergenic | 20.0% |
| !! | TAGTAATTCAGTTTCTAATT+TGG | + | chr5.3:503764-503783 | None:intergenic | 20.0% |
| !! | TATCCTAAAGATAACAATAA+GGG | - | chr5.3:501587-501606 | MS.gene024961:intron | 20.0% |
| !! | TATTTGTGAGATACTAAATT+GGG | + | chr5.3:501788-501807 | None:intergenic | 20.0% |
| !! | TGTGTACAAATATAGAATTA+GGG | - | chr5.3:504738-504757 | MS.gene024961:CDS | 20.0% |
| !! | TTATCCTAAAGATAACAATA+AGG | - | chr5.3:501586-501605 | MS.gene024961:intron | 20.0% |
| !! | TTATTTGTGAGATACTAAAT+TGG | + | chr5.3:501789-501808 | None:intergenic | 20.0% |
| !! | TTGTGTACAAATATAGAATT+AGG | - | chr5.3:504737-504756 | MS.gene024961:CDS | 20.0% |
| !!! | TGAAATAATAAATTTGTTGG+TGG | - | chr5.3:504886-504905 | MS.gene024961:CDS | 20.0% |
| !!! | TGCTTTAGAAATTTATCAAT+TGG | + | chr5.3:504807-504826 | None:intergenic | 20.0% |
| ! | AAAAATAGCATGGAGTAATT+TGG | + | chr5.3:501818-501837 | None:intergenic | 25.0% |
| ! | AAACAAGAACGTGTAAATTT+AGG | + | chr5.3:504570-504589 | None:intergenic | 25.0% |
| ! | AAACAGACTTTCTAATAACA+CGG | - | chr5.3:503243-503262 | MS.gene024961:CDS | 25.0% |
| ! | AATGAAAGTAACAAGAAAGA+AGG | + | chr5.3:501711-501730 | None:intergenic | 25.0% |
| ! | AATTATAAAGGACGTTACTT+GGG | + | chr5.3:502813-502832 | None:intergenic | 25.0% |
| ! | ACAGTACCATGTTATATAAT+GGG | + | chr5.3:502331-502350 | None:intergenic | 25.0% |
| ! | ATTATAACATAGGGACTAAA+GGG | - | chr5.3:501862-501881 | MS.gene024961:intron | 25.0% |
| ! | TCTACAGTATAAAAATAGCA+TGG | + | chr5.3:501828-501847 | None:intergenic | 25.0% |
| ! | TTCTTATTATGTTTATCTGC+AGG | - | chr5.3:502704-502723 | MS.gene024961:intron | 25.0% |
| !! | ACGCAAAATTGATTTCTAAA+GGG | - | chr5.3:503428-503447 | MS.gene024961:intron | 25.0% |
| !! | AGAACAAATAGCCTTTAAAA+CGG | + | chr5.3:503003-503022 | None:intergenic | 25.0% |
| !! | CAAAATGGAATTTTCAGAAT+CGG | + | chr5.3:502774-502793 | None:intergenic | 25.0% |
| !!! | CGTAGATTTTTTTATGAAAC+TGG | - | chr5.3:502881-502900 | MS.gene024961:intron | 25.0% |
| !!! | TATGTTGATTGAGTTTTTGA+AGG | - | chr5.3:502251-502270 | MS.gene024961:intron | 25.0% |
| AACACAAGTAAGTACATAGA+GGG | + | chr5.3:501903-501922 | None:intergenic | 30.0% | |
| ACACATATTGTTGTGTAAAC+AGG | - | chr5.3:503783-503802 | MS.gene024961:intron | 30.0% | |
| ACTTCACCTGATAAAATCAA+AGG | - | chr5.3:501494-501513 | MS.gene024961:intron | 30.0% | |
| ATCTTGCTCTTCTTTCAAAA+TGG | + | chr5.3:502789-502808 | None:intergenic | 30.0% | |
| ATGTGGTTGTTGAAAATTTG+AGG | - | chr5.3:502460-502479 | MS.gene024961:intron | 30.0% | |
| ATTAAAGTAGCGAAGAATCA+AGG | + | chr5.3:501752-501771 | None:intergenic | 30.0% | |
| CAACCCTTATTGTTATCTTT+AGG | + | chr5.3:501593-501612 | None:intergenic | 30.0% | |
| CAATTATAAAGGACGTTACT+TGG | + | chr5.3:502814-502833 | None:intergenic | 30.0% | |
| CAGTACCATGTTATATAATG+GGG | + | chr5.3:502330-502349 | None:intergenic | 30.0% | |
| CAGTACTGTTTATGTTAGTT+GGG | - | chr5.3:501426-501445 | MS.gene024961:CDS | 30.0% | |
| CATTATAACATAGGGACTAA+AGG | - | chr5.3:501861-501880 | MS.gene024961:intron | 30.0% | |
| CTTCACCTGATAAAATCAAA+GGG | - | chr5.3:501495-501514 | MS.gene024961:intron | 30.0% | |
| GACAGTACCATGTTATATAA+TGG | + | chr5.3:502332-502351 | None:intergenic | 30.0% | |
| GATGGTGTAAAAAATTGTGA+AGG | - | chr5.3:503850-503869 | MS.gene024961:CDS | 30.0% | |
| GTAAAAAATTGTGAAGGTGA+GGG | - | chr5.3:503856-503875 | MS.gene024961:CDS | 30.0% | |
| TACAATGTTAAATATCTGCC+AGG | - | chr5.3:503294-503313 | MS.gene024961:intron | 30.0% | |
| TAGTCCCTATGTTATAATGA+GGG | + | chr5.3:501860-501879 | None:intergenic | 30.0% | |
| TAGTCCCTCATTATAACATA+GGG | - | chr5.3:501853-501872 | MS.gene024961:intron | 30.0% | |
| TCAGTACTGTTTATGTTAGT+TGG | - | chr5.3:501425-501444 | MS.gene024961:CDS | 30.0% | |
| TGTAAAAAATTGTGAAGGTG+AGG | - | chr5.3:503855-503874 | MS.gene024961:CDS | 30.0% | |
| TGTATACAACTCACTTATAC+AGG | + | chr5.3:504528-504547 | None:intergenic | 30.0% | |
| TTACACCCCATTATATAACA+TGG | - | chr5.3:502322-502341 | MS.gene024961:intron | 30.0% | |
| TTACCTGTAGATTATACAGT+AGG | + | chr5.3:504634-504653 | None:intergenic | 30.0% | |
| TTAGTCCCTATGTTATAATG+AGG | + | chr5.3:501861-501880 | None:intergenic | 30.0% | |
| TTAGTCCCTCATTATAACAT+AGG | - | chr5.3:501852-501871 | MS.gene024961:intron | 30.0% | |
| TTTACTTACCTTTGGTACAA+GGG | - | chr5.3:503073-503092 | MS.gene024961:CDS | 30.0% | |
| ! | AATCAATTTTGCGTGCATAA+AGG | + | chr5.3:503422-503441 | None:intergenic | 30.0% |
| ! | AGAGAGGAGATAACATATTT+TGG | + | chr5.3:504161-504180 | None:intergenic | 30.0% |
| ! | AGATTGTTTCTTTGCTTTGA+AGG | - | chr5.3:501930-501949 | MS.gene024961:CDS | 30.0% |
| ! | CACGCAAAATTGATTTCTAA+AGG | - | chr5.3:503427-503446 | MS.gene024961:intron | 30.0% |
| ! | GCTCTTATTGGAAAAACTTT+TGG | - | chr5.3:502087-502106 | MS.gene024961:intron | 30.0% |
| ! | TTTATAGTGGAAAACTCACT+AGG | + | chr5.3:504338-504357 | None:intergenic | 30.0% |
| !! | ATATTTTGGACAAAAGAGAG+AGG | + | chr5.3:504147-504166 | None:intergenic | 30.0% |
| !! | CTCAGTTTGGTGATTTTATT+GGG | - | chr5.3:504779-504798 | MS.gene024961:CDS | 30.0% |
| !! | GAGTTTTTGAAGGATTTCAA+GGG | - | chr5.3:502261-502280 | MS.gene024961:intron | 30.0% |
| !! | TCTCAGTTTGGTGATTTTAT+TGG | - | chr5.3:504778-504797 | MS.gene024961:CDS | 30.0% |
| !! | TGAGTTTTTGAAGGATTTCA+AGG | - | chr5.3:502260-502279 | MS.gene024961:intron | 30.0% |
| !! | TGTTTCCCTTTGATTTTATC+AGG | + | chr5.3:501503-501522 | None:intergenic | 30.0% |
| !!! | ATGAAACTGGTTTTGTAGAT+TGG | - | chr5.3:502894-502913 | MS.gene024961:intron | 30.0% |
| !!! | GCTTTTTGGGTTATTTTGAT+TGG | - | chr5.3:504685-504704 | MS.gene024961:intron | 30.0% |
| !!! | GTTTTAAAGGCTATTTGTTC+TGG | - | chr5.3:503002-503021 | MS.gene024961:intron | 30.0% |
| !!! | TGAAACTGGTTTTGTAGATT+GGG | - | chr5.3:502895-502914 | MS.gene024961:intron | 30.0% |
| !!! | TTGTACTTTTTCTCCTTCAT+CGG | + | chr5.3:502570-502589 | None:intergenic | 30.0% |
| AAAAGAAACCGAAAAGCCTT+GGG | - | chr5.3:502506-502525 | MS.gene024961:intron | 35.0% | |
| AATCTCAGCAAGTGAAACAT+TGG | - | chr5.3:504208-504227 | MS.gene024961:CDS | 35.0% | |
| AATGAGTGCTTGACAAACAA+CGG | - | chr5.3:503161-503180 | MS.gene024961:intron | 35.0% | |
| AATGCCGTCATTAAATCTCT+TGG | - | chr5.3:502603-502622 | MS.gene024961:intron | 35.0% | |
| AATGTAGCTGCAAAAACACT+TGG | - | chr5.3:504447-504466 | MS.gene024961:CDS | 35.0% | |
| ACAACAAAGTAAGCAAGTCA+TGG | + | chr5.3:504849-504868 | None:intergenic | 35.0% | |
| ACTCACTTATACAGGTATCA+TGG | + | chr5.3:504520-504539 | None:intergenic | 35.0% | |
| AGAAGTGAAGGCAATAAACA+TGG | + | chr5.3:503469-503488 | None:intergenic | 35.0% | |
| AGATACTAAATTGGGCATCT+AGG | + | chr5.3:501780-501799 | None:intergenic | 35.0% | |
| AGCAAAGAAACAATCTGCAA+AGG | + | chr5.3:501926-501945 | None:intergenic | 35.0% | |
| AGTACTTCATGCTTCAATCT+GGG | - | chr5.3:504108-504127 | MS.gene024961:CDS | 35.0% | |
| ATGTAGCTGCAAAAACACTT+GGG | - | chr5.3:504448-504467 | MS.gene024961:CDS | 35.0% | |
| CAACAAAGTAAGCAAGTCAT+GGG | + | chr5.3:504848-504867 | None:intergenic | 35.0% | |
| CAGAATGAGGATTCTATTCA+TGG | + | chr5.3:503968-503987 | None:intergenic | 35.0% | |
| CTGACCAAGAGATTTAATGA+CGG | + | chr5.3:502610-502629 | None:intergenic | 35.0% | |
| CTGTTATTGACAACAAGAGT+AGG | + | chr5.3:502951-502970 | None:intergenic | 35.0% | |
| GAACACAAGTAAGTACATAG+AGG | + | chr5.3:501904-501923 | None:intergenic | 35.0% | |
| GACAACAAGAGTAGGTAATA+TGG | + | chr5.3:502943-502962 | None:intergenic | 35.0% | |
| GGTAAGTGTTTACTTACCTT+TGG | - | chr5.3:503065-503084 | MS.gene024961:CDS | 35.0% | |
| GTCAATAACAGACAATATCG+TGG | - | chr5.3:502960-502979 | MS.gene024961:intron | 35.0% | |
| GTTTACTTACCTTTGGTACA+AGG | - | chr5.3:503072-503091 | MS.gene024961:CDS | 35.0% | |
| TACAACTTGTGAAGGTGAAA+TGG | - | chr5.3:503384-503403 | MS.gene024961:CDS | 35.0% | |
| TAGTACTTCATGCTTCAATC+TGG | - | chr5.3:504107-504126 | MS.gene024961:CDS | 35.0% | |
| TATGTTAGTTGGGATGTCAA+CGG | - | chr5.3:501436-501455 | MS.gene024961:CDS | 35.0% | |
| TCTCCTACTGTATAATCTAC+AGG | - | chr5.3:504628-504647 | MS.gene024961:intron | 35.0% | |
| TGGAGATCTTCTGTATATCA+AGG | - | chr5.3:504493-504512 | MS.gene024961:intron | 35.0% | |
| TGGTCAATGTTAATCTTGAC+TGG | - | chr5.3:502145-502164 | MS.gene024961:intron | 35.0% | |
| TTGTTGTGTAAACAGGATGA+TGG | - | chr5.3:503790-503809 | MS.gene024961:intron | 35.0% | |
| ! | AACTTTTGGTCAGAAGTTGA+AGG | - | chr5.3:502101-502120 | MS.gene024961:intron | 35.0% |
| ! | ACATGCATTTTCTGCTTGTT+TGG | - | chr5.3:503665-503684 | MS.gene024961:CDS | 35.0% |
| ! | AGTTTTTCCAATAAGAGCAG+AGG | + | chr5.3:502085-502104 | None:intergenic | 35.0% |
| ! | CTTTGATGATTGACGTGATT+TGG | + | chr5.3:504989-505008 | None:intergenic | 35.0% |
| ! | GAAGGAGAAAAAGTACAACA+AGG | - | chr5.3:502572-502591 | MS.gene024961:CDS | 35.0% |
| ! | GTTTTTCCAATAAGAGCAGA+GGG | + | chr5.3:502084-502103 | None:intergenic | 35.0% |
| ! | TTATGTTTTCTTGCAGTCGT+TGG | - | chr5.3:502646-502665 | MS.gene024961:intron | 35.0% |
| !! | AACTTTGGGATTCCTCAATA+CGG | - | chr5.3:501539-501558 | MS.gene024961:intron | 35.0% |
| !! | GAAACATTGGCTTCTATACT+TGG | - | chr5.3:504221-504240 | MS.gene024961:CDS | 35.0% |
| !! | GTTTCTTTGCTTTGAAGGTT+TGG | - | chr5.3:501935-501954 | MS.gene024961:CDS | 35.0% |
| !! | TGTTTTTGCAGCTACATTCA+GGG | + | chr5.3:504445-504464 | None:intergenic | 35.0% |
| !! | TTCTGAAATCAGAGCAATCA+TGG | - | chr5.3:504928-504947 | MS.gene024961:CDS | 35.0% |
| !!! | TGGGTTATTTTGATTGGCTT+GGG | - | chr5.3:504691-504710 | MS.gene024961:intron | 35.0% |
| !!! | TGTACTTTTTCTCCTTCATC+GGG | + | chr5.3:502569-502588 | None:intergenic | 35.0% |
| !!! | TTGGGTTATTTTGATTGGCT+TGG | - | chr5.3:504690-504709 | MS.gene024961:intron | 35.0% |
| AAGTCCCAATGCATAAACCA+TGG | - | chr5.3:502381-502400 | MS.gene024961:intron | 40.0% | |
| AATCACGATCCTTTAGCTGA+GGG | - | chr5.3:503512-503531 | MS.gene024961:intron | 40.0% | |
| AATTGAACACCATCGACCAA+GGG | + | chr5.3:503349-503368 | None:intergenic | 40.0% | |
| ACAACACAGCATAGAAGTGA+AGG | + | chr5.3:503481-503500 | None:intergenic | 40.0% | |
| ACAATACCCTCTGCTCTTAT+TGG | - | chr5.3:502075-502094 | MS.gene024961:intron | 40.0% | |
| ACCAATAGTAACGATGAGTG+TGG | - | chr5.3:502216-502235 | MS.gene024961:intron | 40.0% | |
| AGATCAACAATGGAGGATGT+TGG | - | chr5.3:503625-503644 | MS.gene024961:CDS | 40.0% | |
| AGCTAATATCACTGCATGCA+AGG | - | chr5.3:503205-503224 | MS.gene024961:CDS | 40.0% | |
| AGTCCCAATGCATAAACCAT+GGG | - | chr5.3:502382-502401 | MS.gene024961:intron | 40.0% | |
| ATCTCCCATGGTTTATGCAT+TGG | + | chr5.3:502389-502408 | None:intergenic | 40.0% | |
| ATTCAGAAAGCTACAGAGCA+GGG | + | chr5.3:503914-503933 | None:intergenic | 40.0% | |
| CAAAAGAAACCGAAAAGCCT+TGG | - | chr5.3:502505-502524 | MS.gene024961:intron | 40.0% | |
| CACAGGAAATCAGAAGAATG+AGG | + | chr5.3:503127-503146 | None:intergenic | 40.0% | |
| CAGACAATATCGTGGTAAAC+TGG | - | chr5.3:502968-502987 | MS.gene024961:intron | 40.0% | |
| CATTGCTCAAACAAACAGCT+GGG | + | chr5.3:503046-503065 | None:intergenic | 40.0% | |
| GACGGTTATACAACTTGTGA+AGG | - | chr5.3:503376-503395 | MS.gene024961:CDS | 40.0% | |
| GCAAAGATTGACAAGTGCAT+GGG | - | chr5.3:502737-502756 | MS.gene024961:CDS | 40.0% | |
| GCATATTTCCCTTGTACCAA+AGG | + | chr5.3:503084-503103 | None:intergenic | 40.0% | |
| GGTGTGTCCATAGTAATCAA+GGG | + | chr5.3:502015-502034 | None:intergenic | 40.0% | |
| GGTGTTCAATTCAAAGGAGA+CGG | - | chr5.3:503358-503377 | MS.gene024961:CDS | 40.0% | |
| GTAACTAACTTCCACGATCA+AGG | + | chr5.3:501679-501698 | None:intergenic | 40.0% | |
| GTCGATGGTGTTCAATTCAA+AGG | - | chr5.3:503352-503371 | MS.gene024961:intron | 40.0% | |
| GTTTCTTCTGTGTTTGCAGT+CGG | - | chr5.3:503585-503604 | MS.gene024961:intron | 40.0% | |
| TAATCACGATCCTTTAGCTG+AGG | - | chr5.3:503511-503530 | MS.gene024961:intron | 40.0% | |
| TATCGTGGTAAACTGGAGAA+AGG | - | chr5.3:502975-502994 | MS.gene024961:intron | 40.0% | |
| TATTCAGAAAGCTACAGAGC+AGG | + | chr5.3:503915-503934 | None:intergenic | 40.0% | |
| TCAAATTAGATGCCCGATGA+AGG | - | chr5.3:502554-502573 | MS.gene024961:CDS | 40.0% | |
| TCCACACTCATCGTTACTAT+TGG | + | chr5.3:502220-502239 | None:intergenic | 40.0% | |
| TCTATGCTGTGTTGTGCATA+GGG | - | chr5.3:503486-503505 | MS.gene024961:CDS | 40.0% | |
| TCTCCCATGGTTTATGCATT+GGG | + | chr5.3:502388-502407 | None:intergenic | 40.0% | |
| TCTTCCTTCAAATCCAAACC+TGG | - | chr5.3:501632-501651 | MS.gene024961:intron | 40.0% | |
| TGCAAAGATTGACAAGTGCA+TGG | - | chr5.3:502736-502755 | MS.gene024961:CDS | 40.0% | |
| TGTAGCTGCAAAAACACTTG+GGG | - | chr5.3:504449-504468 | MS.gene024961:CDS | 40.0% | |
| TGTTAATCTTGACTGGAGAG+AGG | - | chr5.3:502152-502171 | MS.gene024961:intron | 40.0% | |
| TTAAATGCCAGTGTCCTACA+GGG | - | chr5.3:503818-503837 | MS.gene024961:CDS | 40.0% | |
| TTACTCAATGTAAACGCGTG+AGG | + | chr5.3:502354-502373 | None:intergenic | 40.0% | |
| TTCTATGCTGTGTTGTGCAT+AGG | - | chr5.3:503485-503504 | MS.gene024961:CDS | 40.0% | |
| ! | GAATTTTCAGAATCGGCATC+AGG | + | chr5.3:502767-502786 | None:intergenic | 40.0% |
| ! | GGCTATTTGTTCTGGATTTG+AGG | - | chr5.3:503010-503029 | MS.gene024961:intron | 40.0% |
| ! | TTGTGTAAACAGGATGATGG+AGG | - | chr5.3:503793-503812 | MS.gene024961:intron | 40.0% |
| !! | GTGTTTTTGCAGCTACATTC+AGG | + | chr5.3:504446-504465 | None:intergenic | 40.0% |
| !!! | ACTGGTTTTGTAGATTGGGA+AGG | - | chr5.3:502899-502918 | MS.gene024961:intron | 40.0% |
| !!! | CTGGTTTTGTAGATTGGGAA+GGG | - | chr5.3:502900-502919 | MS.gene024961:intron | 40.0% |
| AACTTCCACGATCAAGGAGA+AGG | + | chr5.3:501673-501692 | None:intergenic | 45.0% | |
| ACAGTGCGATCGGTAACTTT+GGG | - | chr5.3:501525-501544 | MS.gene024961:intron | 45.0% | |
| ACTCGTTGCCGATGATATTG+AGG | - | chr5.3:501987-502006 | MS.gene024961:CDS | 45.0% | |
| ACTTCAGCACAGGCTATGAT+GGG | - | chr5.3:502433-502452 | MS.gene024961:intron | 45.0% | |
| AGAAAATGCATGTCCGTTCC+GGG | + | chr5.3:503658-503677 | None:intergenic | 45.0% | |
| AGAATCTGCAGCTACTTGAC+TGG | + | chr5.3:504273-504292 | None:intergenic | 45.0% | |
| AGCACCAGGTTTGGATTTGA+AGG | + | chr5.3:501639-501658 | None:intergenic | 45.0% | |
| AGCAGATGAGACATCCTCTT+CGG | + | chr5.3:502037-502056 | None:intergenic | 45.0% | |
| AGCTATGACTGCAGTTGTAG+TGG | - | chr5.3:504473-504492 | MS.gene024961:intron | 45.0% | |
| AGGGACTAAAGGGACCAAAA+TGG | - | chr5.3:501872-501891 | MS.gene024961:intron | 45.0% | |
| ATCGTGTCGAGTATGAGTTG+TGG | - | chr5.3:502193-502212 | MS.gene024961:intron | 45.0% | |
| ATTGAACACCATCGACCAAG+GGG | + | chr5.3:503348-503367 | None:intergenic | 45.0% | |
| ATTTGTTTCCACGTCTGCAC+AGG | + | chr5.3:503144-503163 | None:intergenic | 45.0% | |
| CAAGGGCTCCTCAATATCAT+CGG | + | chr5.3:501998-502017 | None:intergenic | 45.0% | |
| CACAATGCTTGTTCAACCCA+TGG | + | chr5.3:504303-504322 | None:intergenic | 45.0% | |
| CAGAAAATGCATGTCCGTTC+CGG | + | chr5.3:503659-503678 | None:intergenic | 45.0% | |
| CAGTCAGGCAAAATCCACTT+GGG | - | chr5.3:504660-504679 | MS.gene024961:intron | 45.0% | |
| CAGTGTCCTACAGGGTTTAA+AGG | - | chr5.3:503826-503845 | MS.gene024961:CDS | 45.0% | |
| CCAGCTGTTTGTTTGAGCAA+TGG | - | chr5.3:503044-503063 | MS.gene024961:CDS | 45.0% | |
| CCATCACCTTTAAACCCTGT+AGG | + | chr5.3:503835-503854 | None:intergenic | 45.0% | |
| CCATTGCTCAAACAAACAGC+TGG | + | chr5.3:503047-503066 | None:intergenic | 45.0% | |
| CCTACAGGGTTTAAAGGTGA+TGG | - | chr5.3:503832-503851 | MS.gene024961:CDS | 45.0% | |
| CGTTGCAAGATCAACAATGG+AGG | - | chr5.3:503618-503637 | MS.gene024961:CDS | 45.0% | |
| CTCCAGTGAAACAAACAGAG+AGG | + | chr5.3:504177-504196 | None:intergenic | 45.0% | |
| CTCCTCTCTGTTTGTTTCAC+TGG | - | chr5.3:504172-504191 | MS.gene024961:CDS | 45.0% | |
| CTTTAAACCCTGTAGGACAC+TGG | + | chr5.3:503828-503847 | None:intergenic | 45.0% | |
| GAATTGAACACCATCGACCA+AGG | + | chr5.3:503350-503369 | None:intergenic | 45.0% | |
| GCACAGATCTTAGAGAAAGG+AGG | - | chr5.3:502288-502307 | MS.gene024961:intron | 45.0% | |
| GCAGATTCTTCGTAGTCCAT+GGG | - | chr5.3:504284-504303 | MS.gene024961:CDS | 45.0% | |
| GCAGCACAGATCTTAGAGAA+AGG | - | chr5.3:502285-502304 | MS.gene024961:intron | 45.0% | |
| GGGACTAAAGGGACCAAAAT+GGG | - | chr5.3:501873-501892 | MS.gene024961:intron | 45.0% | |
| GGGTGTGTCCATAGTAATCA+AGG | + | chr5.3:502016-502035 | None:intergenic | 45.0% | |
| GTTAAATGCCAGTGTCCTAC+AGG | - | chr5.3:503817-503836 | MS.gene024961:CDS | 45.0% | |
| TACAGGTAAAACTGCCAGTC+AGG | - | chr5.3:504645-504664 | MS.gene024961:intron | 45.0% | |
| TCATACTCGACACGATCATC+AGG | + | chr5.3:502189-502208 | None:intergenic | 45.0% | |
| TCTGCTGCATTCTCTCAGTT+TGG | - | chr5.3:504766-504785 | MS.gene024961:CDS | 45.0% | |
| TGAAGGATGCCATTAGTGCT+GGG | - | chr5.3:502118-502137 | MS.gene024961:intron | 45.0% | |
| TGACAAACAACGGTGGTTGT+TGG | - | chr5.3:503171-503190 | MS.gene024961:intron | 45.0% | |
| TGAGGAGCCCTTGATTACTA+TGG | - | chr5.3:502005-502024 | MS.gene024961:intron | 45.0% | |
| TGCAGATTCTTCGTAGTCCA+TGG | - | chr5.3:504283-504302 | MS.gene024961:CDS | 45.0% | |
| TTCAGAAAGCTACAGAGCAG+GGG | + | chr5.3:503913-503932 | None:intergenic | 45.0% | |
| TTGAAGGATGCCATTAGTGC+TGG | - | chr5.3:502117-502136 | MS.gene024961:intron | 45.0% | |
| ! | AGGCTATGATGGGAAAGATG+TGG | - | chr5.3:502443-502462 | MS.gene024961:intron | 45.0% |
| ! | CATAGAGGGAAGACCCATTT+TGG | + | chr5.3:501889-501908 | None:intergenic | 45.0% |
| ! | CGTGATTTGGAACTTCTGCT+TGG | + | chr5.3:504976-504995 | None:intergenic | 45.0% |
| ! | GAAGGTTTGGAATGCTCAGA+AGG | - | chr5.3:501948-501967 | MS.gene024961:CDS | 45.0% |
| ! | GAGGCAGCTATGTGTTTTCA+AGG | - | chr5.3:502479-502498 | MS.gene024961:intron | 45.0% |
| ! | TTTGGGATTCCTCAATACGG+TGG | - | chr5.3:501542-501561 | MS.gene024961:intron | 45.0% |
| !! | ATTGGCTTGGGTATGATTGC+TGG | - | chr5.3:504703-504722 | MS.gene024961:intron | 45.0% |
| !! | GCAGCTATGTGTTTTCAAGG+TGG | - | chr5.3:502482-502501 | MS.gene024961:intron | 45.0% |
| !! | GGTGGTTTTGCAGCAATACA+TGG | - | chr5.3:504904-504923 | MS.gene024961:CDS | 45.0% |
| !!! | AATCCACTTGGGCTGCTTTT+TGG | - | chr5.3:504671-504690 | MS.gene024961:intron | 45.0% |
| !!! | ATCCACTTGGGCTGCTTTTT+GGG | - | chr5.3:504672-504691 | MS.gene024961:intron | 45.0% |
| !!! | GGAGAAAGGTGCCGTTTTAA+AGG | - | chr5.3:502989-503008 | MS.gene024961:intron | 45.0% |
| AAACAACGGTGGTTGTTGGC+AGG | - | chr5.3:503175-503194 | MS.gene024961:intron | 50.0% | |
| AAACCGAAAAGCCTTGGGTG+TGG | - | chr5.3:502511-502530 | MS.gene024961:intron | 50.0% | |
| AACCCAAAAAGCAGCCCAAG+TGG | + | chr5.3:504677-504696 | None:intergenic | 50.0% | |
| AACTTCTGCTTGGCTGTCCA+GGG | + | chr5.3:504966-504985 | None:intergenic | 50.0% | |
| ACACAACTACGAGTGCACGT+GGG | + | chr5.3:503558-503577 | None:intergenic | 50.0% | |
| ACCATCCTTCTCCTTGATCG+TGG | - | chr5.3:501665-501684 | MS.gene024961:CDS | 50.0% | |
| ATCTGCCAGGATACATTCCG+TGG | - | chr5.3:503307-503326 | MS.gene024961:intron | 50.0% | |
| CACAGATGTCCCTCAGCTAA+AGG | + | chr5.3:503524-503543 | None:intergenic | 50.0% | |
| CATGGCACAATATATGCCCC+TGG | - | chr5.3:504946-504965 | MS.gene024961:CDS | 50.0% | |
| CCAGTCAGGCAAAATCCACT+TGG | - | chr5.3:504659-504678 | MS.gene024961:intron | 50.0% | |
| CGATCAAGGAGAAGGATGGT+AGG | + | chr5.3:501665-501684 | None:intergenic | 50.0% | |
| CTTGGGTATGATTGCTGGAG+GGG | - | chr5.3:504708-504727 | MS.gene024961:intron | 50.0% | |
| GAAGGATGCCATTAGTGCTG+GGG | - | chr5.3:502119-502138 | MS.gene024961:intron | 50.0% | |
| GACAGTGCGATCGGTAACTT+TGG | - | chr5.3:501524-501543 | MS.gene024961:intron | 50.0% | |
| GACCATATCCCCAGCACTAA+TGG | + | chr5.3:502130-502149 | None:intergenic | 50.0% | |
| GACTTCAGCACAGGCTATGA+TGG | - | chr5.3:502432-502451 | MS.gene024961:intron | 50.0% | |
| GAGTGCTTGACAAACAACGG+TGG | - | chr5.3:503164-503183 | MS.gene024961:intron | 50.0% | |
| GCAGATGAGACATCCTCTTC+GGG | + | chr5.3:502036-502055 | None:intergenic | 50.0% | |
| GCTTGGGTATGATTGCTGGA+GGG | - | chr5.3:504707-504726 | MS.gene024961:intron | 50.0% | |
| GGGAAACATGACAGTGCGAT+CGG | - | chr5.3:501515-501534 | MS.gene024961:intron | 50.0% | |
| GGTGGAGAAGAACAGCTTGT+CGG | - | chr5.3:501469-501488 | MS.gene024961:CDS | 50.0% | |
| TACTATGGACACACCCGAAG+AGG | - | chr5.3:502020-502039 | MS.gene024961:intron | 50.0% | |
| TAGATTGGGAAGGGATCACG+CGG | - | chr5.3:502909-502928 | MS.gene024961:intron | 50.0% | |
| TCAGAAAGCTACAGAGCAGG+GGG | + | chr5.3:503912-503931 | None:intergenic | 50.0% | |
| TCCACGATCAAGGAGAAGGA+TGG | + | chr5.3:501669-501688 | None:intergenic | 50.0% | |
| TCCTCAATACGGTGGTAGCA+TGG | - | chr5.3:501550-501569 | MS.gene024961:intron | 50.0% | |
| TCGACACGATCATCAGGATG+AGG | + | chr5.3:502183-502202 | None:intergenic | 50.0% | |
| TCTGATTTCCTGTGCAGACG+TGG | - | chr5.3:503133-503152 | MS.gene024961:intron | 50.0% | |
| TCTGCCAGGATACATTCCGT+GGG | - | chr5.3:503308-503327 | MS.gene024961:intron | 50.0% | |
| TCTTCTGTGTTTGCAGTCGG+TGG | - | chr5.3:503588-503607 | MS.gene024961:intron | 50.0% | |
| TTGGGTATGATTGCTGGAGG+GGG | - | chr5.3:504709-504728 | MS.gene024961:intron | 50.0% | |
| TTGTTGATCTTGCAACGCCC+AGG | + | chr5.3:503615-503634 | None:intergenic | 50.0% | |
| ! | GGGCGTTGCAAGATCAACAA+TGG | - | chr5.3:503615-503634 | MS.gene024961:CDS | 50.0% |
| ! | GTTTGGAATGCTCAGAAGGC+TGG | - | chr5.3:501952-501971 | MS.gene024961:CDS | 50.0% |
| ! | TGCCATTAGTGCTGGGGATA+TGG | - | chr5.3:502125-502144 | MS.gene024961:intron | 50.0% |
| !! | CCAAGTGGATTTTGCCTGAC+TGG | + | chr5.3:504662-504681 | None:intergenic | 50.0% |
| ACATAGTCCCACCACACCCA+AGG | + | chr5.3:502525-502544 | None:intergenic | 55.0% | |
| ACTTCTGCTTGGCTGTCCAG+GGG | + | chr5.3:504965-504984 | None:intergenic | 55.0% | |
| AGAAAGCTACAGAGCAGGGG+GGG | + | chr5.3:503910-503929 | None:intergenic | 55.0% | |
| CAATACGGTGGTAGCATGGC+TGG | - | chr5.3:501554-501573 | MS.gene024961:intron | 55.0% | |
| CACAACTACGAGTGCACGTG+GGG | + | chr5.3:503557-503576 | None:intergenic | 55.0% | |
| CACACAACTACGAGTGCACG+TGG | + | chr5.3:503559-503578 | None:intergenic | 55.0% | |
| CAGAAAGCTACAGAGCAGGG+GGG | + | chr5.3:503911-503930 | None:intergenic | 55.0% | |
| CCATGGGAGATATTGCGCTC+CGG | - | chr5.3:502398-502417 | MS.gene024961:intron | 55.0% | |
| CGAAAAGCCTTGGGTGTGGT+GGG | - | chr5.3:502515-502534 | MS.gene024961:intron | 55.0% | |
| CTGAAGTCCTGCTCAGGATC+CGG | + | chr5.3:502420-502439 | None:intergenic | 55.0% | |
| GAACTTCTGCTTGGCTGTCC+AGG | + | chr5.3:504967-504986 | None:intergenic | 55.0% | |
| GAGGATGTTGGCATGATGCC+CGG | - | chr5.3:503637-503656 | MS.gene024961:CDS | 55.0% | |
| GATGTCAACGGCGAGATTCG+TGG | - | chr5.3:501448-501467 | MS.gene024961:CDS | 55.0% | |
| GCCATGCTACCACCGTATTG+AGG | + | chr5.3:501554-501573 | None:intergenic | 55.0% | |
| GCGAGTATGTGAATGCCCCT+TGG | - | chr5.3:503330-503349 | MS.gene024961:intron | 55.0% | |
| GGCATTCACATACTCGCCCA+CGG | + | chr5.3:503327-503346 | None:intergenic | 55.0% | |
| GGCTTGGGTATGATTGCTGG+AGG | - | chr5.3:504706-504725 | MS.gene024961:intron | 55.0% | |
| TCAGAAGGCTGGAGCTTCTG+CGG | - | chr5.3:501963-501982 | MS.gene024961:CDS | 55.0% | |
| TGTGAATGCCCCTTGGTCGA+TGG | - | chr5.3:503337-503356 | MS.gene024961:intron | 55.0% | |
| TGTTGGCATGATGCCCGGAA+CGG | - | chr5.3:503642-503661 | MS.gene024961:CDS | 55.0% | |
| TGTTTGCAGTCGGTGGACCT+GGG | - | chr5.3:503595-503614 | MS.gene024961:intron | 55.0% | |
| ! | CCACCACACCCAAGGCTTTT+CGG | + | chr5.3:502517-502536 | None:intergenic | 55.0% |
| !! | AGGATGGTAGGAAGAGCACC+AGG | + | chr5.3:501653-501672 | None:intergenic | 55.0% |
| !! | GGTAGGAAGAGCACCAGGTT+TGG | + | chr5.3:501648-501667 | None:intergenic | 55.0% |
| CCGAAAAGCCTTGGGTGTGG+TGG | - | chr5.3:502514-502533 | MS.gene024961:intron | 60.0% | |
| CCGGAGCGCAATATCTCCCA+TGG | + | chr5.3:502401-502420 | None:intergenic | 60.0% | |
| CCTGAGCAGGACTTCAGCAC+AGG | - | chr5.3:502423-502442 | MS.gene024961:intron | 60.0% | |
| CCTGTGCTGAAGTCCTGCTC+AGG | + | chr5.3:502426-502445 | None:intergenic | 60.0% | |
| CTCGCCCACGGAATGTATCC+TGG | + | chr5.3:503315-503334 | None:intergenic | 60.0% | |
| GTCAACGGCGAGATTCGTGG+TGG | - | chr5.3:501451-501470 | MS.gene024961:CDS | 60.0% | |
| GTGTTTGCAGTCGGTGGACC+TGG | - | chr5.3:503594-503613 | MS.gene024961:intron | 60.0% | |
| TTGCGCTCCGGATCCTGAGC+AGG | - | chr5.3:502410-502429 | MS.gene024961:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.3 | gene | 501404 | 505015 | 501404 | ID=MS.gene024961 |
| chr5.3 | mRNA | 501404 | 505015 | 501404 | ID=MS.gene024961.t1;Parent=MS.gene024961 |
| chr5.3 | exon | 504730 | 505015 | 504730 | ID=MS.gene024961.t1.exon1;Parent=MS.gene024961.t1 |
| chr5.3 | CDS | 504730 | 505015 | 504730 | ID=cds.MS.gene024961.t1;Parent=MS.gene024961.t1 |
| chr5.3 | exon | 503795 | 504487 | 503795 | ID=MS.gene024961.t1.exon2;Parent=MS.gene024961.t1 |
| chr5.3 | CDS | 503795 | 504487 | 503795 | ID=cds.MS.gene024961.t1;Parent=MS.gene024961.t1 |
| chr5.3 | exon | 503605 | 503693 | 503605 | ID=MS.gene024961.t1.exon3;Parent=MS.gene024961.t1 |
| chr5.3 | CDS | 503605 | 503693 | 503605 | ID=cds.MS.gene024961.t1;Parent=MS.gene024961.t1 |
| chr5.3 | exon | 503460 | 503507 | 503460 | ID=MS.gene024961.t1.exon4;Parent=MS.gene024961.t1 |
| chr5.3 | CDS | 503460 | 503507 | 503460 | ID=cds.MS.gene024961.t1;Parent=MS.gene024961.t1 |
| chr5.3 | exon | 503354 | 503426 | 503354 | ID=MS.gene024961.t1.exon5;Parent=MS.gene024961.t1 |
| chr5.3 | CDS | 503354 | 503426 | 503354 | ID=cds.MS.gene024961.t1;Parent=MS.gene024961.t1 |
| chr5.3 | exon | 503193 | 503269 | 503193 | ID=MS.gene024961.t1.exon6;Parent=MS.gene024961.t1 |
| chr5.3 | CDS | 503193 | 503269 | 503193 | ID=cds.MS.gene024961.t1;Parent=MS.gene024961.t1 |
| chr5.3 | exon | 503022 | 503103 | 503022 | ID=MS.gene024961.t1.exon7;Parent=MS.gene024961.t1 |
| chr5.3 | CDS | 503022 | 503103 | 503022 | ID=cds.MS.gene024961.t1;Parent=MS.gene024961.t1 |
| chr5.3 | exon | 502733 | 502815 | 502733 | ID=MS.gene024961.t1.exon8;Parent=MS.gene024961.t1 |
| chr5.3 | CDS | 502733 | 502815 | 502733 | ID=cds.MS.gene024961.t1;Parent=MS.gene024961.t1 |
| chr5.3 | exon | 502548 | 502614 | 502548 | ID=MS.gene024961.t1.exon9;Parent=MS.gene024961.t1 |
| chr5.3 | CDS | 502548 | 502614 | 502548 | ID=cds.MS.gene024961.t1;Parent=MS.gene024961.t1 |
| chr5.3 | exon | 501886 | 502014 | 501886 | ID=MS.gene024961.t1.exon10;Parent=MS.gene024961.t1 |
| chr5.3 | CDS | 501886 | 502014 | 501886 | ID=cds.MS.gene024961.t1;Parent=MS.gene024961.t1 |
| chr5.3 | exon | 501660 | 501769 | 501660 | ID=MS.gene024961.t1.exon11;Parent=MS.gene024961.t1 |
| chr5.3 | CDS | 501660 | 501769 | 501660 | ID=cds.MS.gene024961.t1;Parent=MS.gene024961.t1 |
| chr5.3 | exon | 501404 | 501502 | 501404 | ID=MS.gene024961.t1.exon12;Parent=MS.gene024961.t1 |
| chr5.3 | CDS | 501404 | 501502 | 501404 | ID=cds.MS.gene024961.t1;Parent=MS.gene024961.t1 |
| Gene Sequence |
| Protein sequence |
