AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene02506


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene02506.t1 MTR_3g088885 96.652 448 15 0 1 448 1 448 0.0 898
MS.gene02506.t1 MTR_1g029520 81.395 430 72 6 25 447 254 682 0.0 703
MS.gene02506.t1 MTR_7g022470 53.604 444 189 9 9 447 10 441 7.32e-155 447
MS.gene02506.t1 MTR_5g047260 55.422 415 172 5 8 421 16 418 9.61e-155 446
MS.gene02506.t1 MTR_7g028050 48.984 443 213 7 9 446 1 435 1.48e-140 410
MS.gene02506.t1 MTR_4g101950 49.161 417 191 6 6 421 3 399 1.80e-132 389
MS.gene02506.t1 MTR_5g011580 45.657 449 217 8 6 447 3 431 4.89e-129 380
MS.gene02506.t1 MTR_5g015170 46.083 434 211 9 1 415 1 430 5.79e-127 377
MS.gene02506.t1 MTR_5g047260 52.661 357 156 5 8 363 16 360 6.61e-122 359
MS.gene02506.t1 MTR_4g097380 42.005 419 232 5 7 415 26 443 4.29e-115 347
MS.gene02506.t1 MTR_5g047260 53.770 305 129 4 8 311 16 309 1.74e-104 313
MS.gene02506.t1 MTR_7g028050 49.398 332 159 6 120 446 5 332 1.21e-99 301
MS.gene02506.t1 MTR_1g012740 50.000 100 44 1 278 377 54 147 4.16e-24 98.6
MS.gene02506.t1 MTR_1g012740 31.333 150 75 5 6 149 7 134 5.63e-13 67.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene02506.t1 AT1G76990 72.907 454 114 4 1 447 1 452 0.0 679
MS.gene02506.t1 AT1G76990 72.907 454 114 4 1 447 1 452 0.0 679
MS.gene02506.t1 AT1G76990 72.907 454 114 4 1 447 1 452 0.0 679
MS.gene02506.t1 AT1G76990 72.907 454 114 4 1 447 1 452 0.0 679
MS.gene02506.t1 AT1G76990 72.907 454 114 4 1 447 1 452 0.0 679
MS.gene02506.t1 AT1G69040 51.936 439 200 5 9 444 7 437 2.94e-148 430
MS.gene02506.t1 AT1G69040 51.936 439 200 5 9 444 11 441 3.26e-148 430
MS.gene02506.t1 AT2G03730 50.000 452 208 8 4 445 3 446 2.92e-144 420
MS.gene02506.t1 AT2G03730 50.000 452 208 8 4 445 3 446 2.92e-144 420
MS.gene02506.t1 AT5G25320 47.903 453 204 9 1 422 1 452 8.27e-144 420
MS.gene02506.t1 AT3G01990 51.724 406 176 8 10 410 17 407 1.44e-135 397
MS.gene02506.t1 AT3G01990 51.724 406 176 8 10 410 17 407 1.44e-135 397
MS.gene02506.t1 AT3G01990 51.724 406 176 8 10 410 3 393 1.53e-135 397
MS.gene02506.t1 AT3G01990 51.724 406 176 8 10 410 3 393 1.53e-135 397
MS.gene02506.t1 AT3G01990 51.724 406 176 8 10 410 17 407 1.79e-135 397
MS.gene02506.t1 AT3G01990 51.724 406 176 8 10 410 3 393 3.14e-135 396
MS.gene02506.t1 AT5G25320 47.585 414 187 7 38 422 1 413 9.88e-128 378
MS.gene02506.t1 AT1G12420 48.077 416 196 8 8 422 6 402 3.78e-121 360
MS.gene02506.t1 AT4G22780 48.507 402 183 7 12 410 9 389 9.76e-121 360
MS.gene02506.t1 AT4G22780 48.507 402 183 7 12 410 9 389 9.76e-121 360
MS.gene02506.t1 AT5G65890 40.860 465 248 7 7 446 8 470 4.32e-111 336
MS.gene02506.t1 AT5G65890 40.860 465 248 7 7 446 8 470 4.32e-111 336
MS.gene02506.t1 AT5G25320 46.113 373 170 8 1 342 1 373 1.76e-108 326
MS.gene02506.t1 AT3G01990 50.437 343 150 8 10 347 17 344 1.50e-106 320
MS.gene02506.t1 AT3G01990 50.437 343 150 8 10 347 3 330 1.90e-106 319
MS.gene02506.t1 AT3G01990 50.888 338 146 8 10 342 17 339 2.85e-106 319
MS.gene02506.t1 AT1G12420 46.552 348 167 7 76 422 1 330 3.54e-93 286
MS.gene02506.t1 AT5G65890 38.810 420 230 7 52 446 1 418 1.67e-91 284
MS.gene02506.t1 AT5G65890 38.810 420 230 7 52 446 1 418 1.67e-91 284
MS.gene02506.t1 AT3G01990 48.896 317 142 8 10 321 17 318 1.75e-87 270
MS.gene02506.t1 AT3G01990 48.896 317 142 8 10 321 3 304 1.92e-87 269
MS.gene02506.t1 AT5G65890 36.994 346 194 6 123 446 13 356 3.57e-69 224

Find 112 sgRNAs with CRISPR-Local

Find 316 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTTCACTTCTTCTTTGTTC+TGG 0.217028 3.2:-76000256 None:intergenic
CCAAATGTTGTTTGCTGATC+GGG 0.257041 3.2:+76000616 MS.gene02506:CDS
TAACTTGTTGGAAAGGTTCT+TGG 0.291999 3.2:+76001802 MS.gene02506:CDS
ACCTTTAGGAATACTTTATT+CGG 0.293495 3.2:+76001264 MS.gene02506:intron
GGTGGAGCCGCCTATCAATA+TGG 0.298908 3.2:-76000595 None:intergenic
GGGAATGTCCTCCCTCTTTC+CGG 0.308334 3.2:+76000672 MS.gene02506:CDS
GCTAAAACTAGCTTCTTCTT+TGG 0.325528 3.2:+76001779 MS.gene02506:CDS
ATTGGTCAGGCAAATGGGTT+GGG 0.336152 3.2:+76000279 MS.gene02506:CDS
CAGCTACAACCACGTTAAAA+TGG 0.336988 3.2:-76000394 None:intergenic
TCATACTCAGGATCAAAATA+TGG 0.343119 3.2:-75997292 None:intergenic
CTTCTTCTTTGGTAACTTGT+TGG 0.350472 3.2:+76001790 MS.gene02506:CDS
ATAGAATGTTGTGAGGAAAA+AGG 0.357579 3.2:+76000707 MS.gene02506:CDS
ACCACTTCCAGTAGAATTCC+AGG 0.366064 3.2:-75999060 None:intergenic
CCCGATCAGCAAACAACATT+TGG 0.373612 3.2:-76000616 None:intergenic
CATATAGCGATTGAGCTAAT+CGG 0.383863 3.2:+76000320 MS.gene02506:CDS
ACAAAGAAGAAGTGAAGAAT+TGG 0.384276 3.2:+76000261 MS.gene02506:CDS
TTAGCCCATCCTCGTGTCTC+TGG 0.409686 3.2:-76001761 None:intergenic
TTGTACCATCATTGACATAA+AGG 0.411329 3.2:-76000451 None:intergenic
CTGAAGTGTGGACTCATAAC+AGG 0.416112 3.2:+76000414 MS.gene02506:CDS
ATCAGAAGATATGTAAGCTT+TGG 0.416198 3.2:-75999115 None:intergenic
TGAGTTTCACCCATATTGAT+AGG 0.418165 3.2:+76000585 MS.gene02506:CDS
TGAAGAATTGGTCAGGCAAA+TGG 0.419920 3.2:+76000273 MS.gene02506:CDS
TCTGGTTCTTTGTCATATGT+TGG 0.422147 3.2:-76001743 None:intergenic
CCTTGATTAGTGTACAGTTA+TGG 0.426480 3.2:-75998097 None:intergenic
TTCTGATGGAGGATGGTTCA+TGG 0.433562 3.2:+75999131 MS.gene02506:CDS
TTCTATGTGAGGGATGCATC+AGG 0.435247 3.2:+76001641 MS.gene02506:CDS
TTGCTGAAATTCTCATACTC+AGG 0.439597 3.2:-75997304 None:intergenic
GAAGCACTTCGTAAAGAAAT+CGG 0.445977 3.2:+76001689 MS.gene02506:CDS
TTAGAATGGCTGCAGTTTGT+TGG 0.449593 3.2:+75997269 None:intergenic
GGTGAAACTCATGGACAAAC+TGG 0.453115 3.2:-76000573 None:intergenic
AACCATAGATCTCATTGAAA+AGG 0.459867 3.2:+76000024 MS.gene02506:CDS
GATCGGGATTATGAAAGTTA+TGG 0.463149 3.2:+76000632 MS.gene02506:CDS
ATTAAGAGCTTGTTCCCCTC+TGG 0.467903 3.2:-76001615 None:intergenic
AGAATGGCCTAACAGTTTGT+AGG 0.468609 3.2:+76001579 MS.gene02506:CDS
ATACAGAAGGGGAGAAAGAA+AGG 0.470876 3.2:+76001309 MS.gene02506:CDS
GGCCTAACAGTTTGTAGGGC+AGG 0.474532 3.2:+76001584 MS.gene02506:CDS
TCTTTGGTAACTTGTTGGAA+AGG 0.475792 3.2:+76001795 MS.gene02506:CDS
ACCAAATGTTGTTTGCTGAT+CGG 0.476294 3.2:+76000615 MS.gene02506:CDS
TAACAAACCTGGAATTCTAC+TGG 0.480298 3.2:+75999053 MS.gene02506:CDS
ATCAATATGGGTGAAACTCA+TGG 0.480529 3.2:-76000582 None:intergenic
ATATAGCGATTGAGCTAATC+GGG 0.490571 3.2:+76000321 MS.gene02506:CDS
GAAGAAGTGAAGAATTGGTC+AGG 0.491176 3.2:+76000266 MS.gene02506:CDS
AATTGGTCAGGCAAATGGGT+TGG 0.499259 3.2:+76000278 MS.gene02506:CDS
ACAAGAATTCTGAGAGAGAA+TGG 0.499775 3.2:+76001563 MS.gene02506:CDS
TGGGTTGGGGTGCATTCTGT+TGG 0.500255 3.2:+76000293 MS.gene02506:CDS
CCATAACTGTACACTAATCA+AGG 0.500495 3.2:+75998097 MS.gene02506:CDS
TACTTTATTCGGCACATGGA+CGG 0.504584 3.2:+76001275 MS.gene02506:CDS
ATGGAGAGAAAGTTGCTAGT+AGG 0.510505 3.2:+76000549 MS.gene02506:CDS
TGATGTACCTGCGATGCATA+AGG 0.510772 3.2:-76000845 None:intergenic
ATCCGATGAGATTGTGGCAT+GGG 0.515862 3.2:-76000819 None:intergenic
GAAGAATTGGTCAGGCAAAT+GGG 0.517093 3.2:+76000274 MS.gene02506:CDS
ACCTGGAATTCTACTGGAAG+TGG 0.521746 3.2:+75999059 MS.gene02506:CDS
CGTTAAAATGGAGGCTGGCA+AGG 0.523869 3.2:-76000382 None:intergenic
TGTGTCCTTTATGTCAATGA+TGG 0.524064 3.2:+76000446 MS.gene02506:CDS
GTGGAGCCGCCTATCAATAT+GGG 0.526124 3.2:-76000594 None:intergenic
TATCCTTTGCACACAACTCT+AGG 0.530398 3.2:-76001517 None:intergenic
TTTGATAGTGTTAACAAACC+TGG 0.530560 3.2:+75999042 MS.gene02506:CDS
AAGATTAAGGTAAACCTTGG+AGG 0.533637 3.2:-75997337 None:intergenic
GATCAGCAAACAACATTTGG+TGG 0.537075 3.2:-76000613 None:intergenic
ATGGAGTAACGACAACAGAC+AGG 0.537588 3.2:+76000651 MS.gene02506:CDS
AAAGCTTACATATCTTCTGA+TGG 0.539350 3.2:+75999117 MS.gene02506:CDS
GTTGTGTGCAAAGGATAGAG+TGG 0.544908 3.2:+76001523 MS.gene02506:CDS
ACATATCTTCTGATGGAGGA+TGG 0.557362 3.2:+75999124 MS.gene02506:CDS
GAATGGCCTAACAGTTTGTA+GGG 0.559276 3.2:+76001580 MS.gene02506:CDS
TTGTGTGCAAAGGATAGAGT+GGG 0.560363 3.2:+76001524 MS.gene02506:CDS
GATATCTCAGACAAGAGACC+AGG 0.560821 3.2:-76000353 None:intergenic
TTGGTCAGGCAAATGGGTTG+GGG 0.568849 3.2:+76000280 MS.gene02506:CDS
CTCTTAATGTCTTCTATGTG+AGG 0.569159 3.2:+76001630 MS.gene02506:CDS
AAGAACCAGAGACACGAGGA+TGG 0.572425 3.2:+76001756 MS.gene02506:CDS
AGAAATCGGTAAGACAATGA+TGG 0.575183 3.2:+76001703 MS.gene02506:CDS
GCAACAAAATCAACCCTCCA+AGG 0.576070 3.2:+75997323 MS.gene02506:CDS
GGAATACTTTATTCGGCACA+TGG 0.576960 3.2:+76001271 MS.gene02506:intron
GGATGCACACTTGATACAGA+AGG 0.577234 3.2:+76001296 MS.gene02506:CDS
AATGATGGTAGATGTGAAGA+AGG 0.579827 3.2:+76001718 MS.gene02506:CDS
AACCACGTTAAAATGGAGGC+TGG 0.580495 3.2:-76000387 None:intergenic
CTTTGGTGATTATGAAGTCA+AGG 0.580969 3.2:-75999098 None:intergenic
AGATTAAGGTAAACCTTGGA+GGG 0.581667 3.2:-75997336 None:intergenic
TTCCCATGCCACAATCTCAT+CGG 0.582164 3.2:+76000817 MS.gene02506:CDS
AGGGCGATCCGATGAGATTG+TGG 0.584876 3.2:-76000825 None:intergenic
GGATCGCCCTTATGCATCGC+AGG 0.593884 3.2:+76000838 MS.gene02506:CDS
TGATGGTACAAGACAAGCCG+TGG 0.600705 3.2:+76000463 MS.gene02506:CDS
TACCTGCCCTACAAACTGTT+AGG 0.606101 3.2:-76001586 None:intergenic
ATATACAGTATTTCATGTCA+CGG 0.612062 3.2:+75999970 MS.gene02506:intron
TCTTAATGTCTTCTATGTGA+GGG 0.617321 3.2:+76001631 MS.gene02506:CDS
GGGCAGGTATATCAACCAGA+GGG 0.617488 3.2:+76001600 MS.gene02506:CDS
GATGTACCTGCGATGCATAA+GGG 0.618291 3.2:-76000844 None:intergenic
GCTTACATATCTTCTGATGG+AGG 0.624587 3.2:+75999120 MS.gene02506:CDS
TTTCATGTCACGGATCAACA+AGG 0.626341 3.2:+75999980 MS.gene02506:CDS
TACAGAAGGGGAGAAAGAAA+GGG 0.629110 3.2:+76001310 MS.gene02506:CDS
CTAATCGGGAGAGACCGCCC+TGG 0.632484 3.2:+76000335 MS.gene02506:CDS
GATGCACACTTGATACAGAA+GGG 0.635196 3.2:+76001297 MS.gene02506:CDS
AGAACCAGAGACACGAGGAT+GGG 0.635874 3.2:+76001757 MS.gene02506:CDS
TGTACTTTGCAGGGTCTCCG+TGG 0.635916 3.2:+75998061 MS.gene02506:intron
TCTATGTGAGGGATGCATCA+GGG 0.636872 3.2:+76001642 MS.gene02506:CDS
ACGTGGTTGTAGCTGAAGTG+TGG 0.647683 3.2:+76000402 MS.gene02506:CDS
GATCCGATGAGATTGTGGCA+TGG 0.649683 3.2:-76000820 None:intergenic
GATGGAGGATGGTTCATGGA+TGG 0.659799 3.2:+75999135 MS.gene02506:CDS
CTACAACCACGTTAAAATGG+AGG 0.661407 3.2:-76000391 None:intergenic
TTCATGTCACGGATCAACAA+GGG 0.666664 3.2:+75999981 MS.gene02506:CDS
AATTACCATAGAATGTTGTG+AGG 0.670161 3.2:+76000700 MS.gene02506:CDS
ATGCACACTTGATACAGAAG+GGG 0.670406 3.2:+76001298 MS.gene02506:CDS
ATGGCAACTAGCATTGTCCA+CGG 0.673612 3.2:-75998078 None:intergenic
TATTCAAAGAAGAGTAAGCG+AGG 0.682011 3.2:+76001355 MS.gene02506:CDS
GTTTCACCCATATTGATAGG+CGG 0.683397 3.2:+76000588 MS.gene02506:CDS
TGGAGTAACGACAACAGACA+GGG 0.688299 3.2:+76000652 MS.gene02506:CDS
ATATCTCAGACAAGAGACCA+GGG 0.700312 3.2:-76000352 None:intergenic
GGATGCATCAGGGAACTCAG+TGG 0.701774 3.2:+76001652 MS.gene02506:CDS
GAGCCTAGAGTTGTGTGCAA+AGG 0.708129 3.2:+76001514 MS.gene02506:CDS
AGGGCAGGTATATCAACCAG+AGG 0.716826 3.2:+76001599 MS.gene02506:CDS
GACAAAGAACCAGAGACACG+AGG 0.718132 3.2:+76001752 MS.gene02506:CDS
GGCAGGTATATCAACCAGAG+GGG 0.745288 3.2:+76001601 MS.gene02506:CDS
TCTCAGACAAGAGACCAGGG+CGG 0.828951 3.2:-76000349 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAATATAAAATACTTTTGTA+AGG + chr3.2:75997481-75997500 MS.gene02506:intron 10.0%
!!! AATTAAAACTGAAAAATTTT+CGG - chr3.2:75998541-75998560 None:intergenic 10.0%
!!! AATTGAATATAATTTGTAAA+AGG - chr3.2:75998860-75998879 None:intergenic 10.0%
!!! ATGTATAAATAAATTTTTCA+AGG + chr3.2:76000178-76000197 MS.gene02506:intron 10.0%
!!! GAAAAAAAAAAAATTTTTGA+AGG + chr3.2:75998635-75998654 MS.gene02506:intron 10.0%
!!! TGTATAAATAAATTTTTCAA+GGG + chr3.2:76000179-76000198 MS.gene02506:intron 10.0%
!!! TTTTTTTTTTTTTTTTGAAC+CGG + chr3.2:75999614-75999633 MS.gene02506:intron 10.0%
!! AAAAAATCGCAAAAAAAATT+TGG - chr3.2:75998516-75998535 None:intergenic 15.0%
!! AAAAATCGCAAAAAAAATTT+GGG - chr3.2:75998515-75998534 None:intergenic 15.0%
!! TATATTCATTTATCAAGATA+TGG + chr3.2:76000082-76000101 MS.gene02506:intron 15.0%
!! TTCATAAAGAATCATTTATT+TGG + chr3.2:75998972-75998991 MS.gene02506:intron 15.0%
!!! AACTGAATTTTTTTTTTTGA+AGG - chr3.2:75998488-75998507 None:intergenic 15.0%
!!! AATTTATTCTTGTAACATTT+TGG - chr3.2:76001173-76001192 None:intergenic 15.0%
!!! ATTAAAACTGAAAAATTTTC+GGG - chr3.2:75998540-75998559 None:intergenic 15.0%
!!! CTTTAAAATTTAACCAAATA+TGG + chr3.2:75997377-75997396 MS.gene02506:intron 15.0%
!!! TATTCAATTTTCAAACTTAT+AGG + chr3.2:75998871-75998890 MS.gene02506:intron 15.0%
!!! TTTTTTTTTTTTTTTGAACC+GGG + chr3.2:75999615-75999634 MS.gene02506:intron 15.0%
!! AAAAAAAAAAAATAAGCCAG+GGG - chr3.2:75998456-75998475 None:intergenic 20.0%
!! AAAAAATAGAAAGAAAGTTG+TGG + chr3.2:75999507-75999526 MS.gene02506:intron 20.0%
!! AAAAGGAATATTACCATATT+TGG - chr3.2:75997393-75997412 None:intergenic 20.0%
!! AATTATGCAATGTAAAAGTA+TGG + chr3.2:75999812-75999831 MS.gene02506:intron 20.0%
!! ACAAAAAAAAAAAATAAGCC+AGG - chr3.2:75998458-75998477 None:intergenic 20.0%
!! ACTTTAACACTCTTTATTAT+TGG + chr3.2:75999750-75999769 MS.gene02506:intron 20.0%
!! AGTCTTAGTATTAAATTCTA+CGG + chr3.2:76001473-76001492 MS.gene02506:intron 20.0%
!! ATACATCAATTTCTCATAAA+TGG - chr3.2:75997560-75997579 None:intergenic 20.0%
!! CAAAAAAAAAAAATAAGCCA+GGG - chr3.2:75998457-75998476 None:intergenic 20.0%
!! CTCTTGACTATTATTAATAA+CGG - chr3.2:75999279-75999298 None:intergenic 20.0%
!! CTTTAACACTCTTTATTATT+GGG + chr3.2:75999751-75999770 MS.gene02506:intron 20.0%
!! GAAATACTGTATATATCAAT+CGG - chr3.2:75999964-75999983 None:intergenic 20.0%
!! GATTCTTTATGAAACAATAA+AGG - chr3.2:75998965-75998984 None:intergenic 20.0%
!! GTAAAAATAGAAAAACTCTA+GGG - chr3.2:75998252-75998271 None:intergenic 20.0%
!! TAAAAATAGAAAAACTCTAG+GGG - chr3.2:75998251-75998270 None:intergenic 20.0%
!! TCAAAAAAGAATATCTCTTA+TGG + chr3.2:76000490-76000509 MS.gene02506:CDS 20.0%
!! TGTAAAAATAGAAAAACTCT+AGG - chr3.2:75998253-75998272 None:intergenic 20.0%
!! TTAAATACTTGTATCAAGTA+GGG - chr3.2:75999925-75999944 None:intergenic 20.0%
!!! AAATAATTTTCAGACAAACA+AGG - chr3.2:76001138-76001157 None:intergenic 20.0%
!!! AATAATTTTCAGACAAACAA+GGG - chr3.2:76001137-76001156 None:intergenic 20.0%
!!! GAATTTTTTCTATAAGATAG+AGG + chr3.2:76000968-76000987 MS.gene02506:intron 20.0%
!!! GAGTTTTTCTATTTTTACAA+AGG + chr3.2:75998254-75998273 MS.gene02506:intron 20.0%
!!! TTAAAACTGAAAAATTTTCG+GGG - chr3.2:75998539-75998558 None:intergenic 20.0%
!!! TTAACAGTTTTTCATACAAT+AGG + chr3.2:76000217-76000236 MS.gene02506:intron 20.0%
!!! TTCCTACTAATTTTGTTTAT+TGG + chr3.2:76001110-76001129 MS.gene02506:intron 20.0%
!!! TTTCTATTTTTTCAAGCTTA+GGG - chr3.2:75999499-75999518 None:intergenic 20.0%
! AAAAAGAATATCTCTTATGG+AGG + chr3.2:76000493-76000512 MS.gene02506:CDS 25.0%
! ATATACAGTATTTCATGTCA+CGG + chr3.2:75999970-75999989 MS.gene02506:intron 25.0%
! ATTAGAAATATGAAGACTTG+AGG + chr3.2:76001215-76001234 MS.gene02506:intron 25.0%
! ATTCTCACTTGGATTAATTT+AGG + chr3.2:76001190-76001209 MS.gene02506:intron 25.0%
! CAAAATATTACTACACAAAG+TGG + chr3.2:75997897-75997916 MS.gene02506:intron 25.0%
! CGATGAGTAATTGAAAAAAA+CGG + chr3.2:75999658-75999677 MS.gene02506:intron 25.0%
! CGTTATTAATAATAGTCAAG+AGG + chr3.2:75999277-75999296 MS.gene02506:intron 25.0%
! CTTAAATACTTGTATCAAGT+AGG - chr3.2:75999926-75999945 None:intergenic 25.0%
! GTCCAATAAACAAAATTAGT+AGG - chr3.2:76001115-76001134 None:intergenic 25.0%
! TACAAGAATAAATTCTCACT+TGG + chr3.2:76001179-76001198 MS.gene02506:intron 25.0%
! TATTAATAATAGTCAAGAGG+TGG + chr3.2:75999280-75999299 MS.gene02506:intron 25.0%
! TGCCTATCATAAAAATGAAA+TGG + chr3.2:75999689-75999708 MS.gene02506:intron 25.0%
! TTAACTGATTAAACTTTGCA+GGG + chr3.2:75998756-75998775 MS.gene02506:intron 25.0%
! TTAACTGATTAAACTTTGCA+GGG - chr3.2:75998775-75998756 None:intergenic 25.0%
! TTAGGAGTAATGTTGTAATA+TGG + chr3.2:75999439-75999458 MS.gene02506:intron 25.0%
! TTGTATGAAAAACTGTTAAC+AGG - chr3.2:76000216-76000235 None:intergenic 25.0%
! TTTAACTGATTAAACTTTGC+AGG + chr3.2:75998755-75998774 MS.gene02506:intron 25.0%
! TTTAACTGATTAAACTTTGC+AGG - chr3.2:75998774-75998755 None:intergenic 25.0%
!! CAACATTCTATGGTAATTTT+CGG - chr3.2:76000698-76000717 None:intergenic 25.0%
!! CACTTTGTGTAGTAATATTT+TGG - chr3.2:75997899-75997918 None:intergenic 25.0%
!! GTATTAAATTCTACGGATTT+TGG + chr3.2:76001480-76001499 MS.gene02506:intron 25.0%
!! TCTTTGTAGCTAATGAATTT+TGG - chr3.2:75999189-75999208 None:intergenic 25.0%
!!! CAACTTGTATTTTAACACTA+AGG - chr3.2:75999465-75999484 None:intergenic 25.0%
!!! CATTATTCTGTTTCTATGTA+AGG - chr3.2:76001032-76001051 None:intergenic 25.0%
!!! CTTTCTATTTTTTCAAGCTT+AGG - chr3.2:75999500-75999519 None:intergenic 25.0%
!!! TAATAAAGAGTGTTAAAGTG+TGG - chr3.2:75999749-75999768 None:intergenic 25.0%
!!! TATTCTTTTTTGATCATCCA+CGG - chr3.2:76000483-76000502 None:intergenic 25.0%
!!! TGCCATTTCATTTTTATGAT+AGG - chr3.2:75999694-75999713 None:intergenic 25.0%
AAAAGTTCTTTCACAAATCG+TGG - chr3.2:76001420-76001439 None:intergenic 30.0%
AAACTTCATTTGTACTTTGC+AGG + chr3.2:75998051-75998070 MS.gene02506:intron 30.0%
AAAGCTTACATATCTTCTGA+TGG + chr3.2:75999117-75999136 MS.gene02506:CDS 30.0%
AACCATAGATCTCATTGAAA+AGG + chr3.2:76000024-76000043 MS.gene02506:CDS 30.0%
AACTTCATTTGTACTTTGCA+GGG + chr3.2:75998052-75998071 MS.gene02506:intron 30.0%
AATGAAGTTTACCATCAAAG+AGG - chr3.2:75998041-75998060 None:intergenic 30.0%
AATTACCATAGAATGTTGTG+AGG + chr3.2:76000700-76000719 MS.gene02506:CDS 30.0%
ACAAAGAAGAAGTGAAGAAT+TGG + chr3.2:76000261-76000280 MS.gene02506:CDS 30.0%
ACACAGATATACACAATGTT+TGG - chr3.2:75999579-75999598 None:intergenic 30.0%
ACGTCATCAAATTAACACAA+TGG + chr3.2:75998410-75998429 MS.gene02506:intron 30.0%
AGATTAAGGTTCAAACTCAT+AGG - chr3.2:75997779-75997798 None:intergenic 30.0%
AGATTGTGTTAAAAGGAGAT+CGG - chr3.2:75997830-75997849 None:intergenic 30.0%
AGCTCTGTTAAAAAAAGAGA+AGG - chr3.2:75997630-75997649 None:intergenic 30.0%
AGGAAAAAAAAAATTAGCCC+AGG + chr3.2:75998655-75998674 MS.gene02506:intron 30.0%
AGTCACACATAGTACTTAAA+TGG + chr3.2:76000900-76000919 MS.gene02506:intron 30.0%
ATAGAATGTTGTGAGGAAAA+AGG + chr3.2:76000707-76000726 MS.gene02506:CDS 30.0%
ATCAAATTAACACAATGGCA+TGG + chr3.2:75998415-75998434 MS.gene02506:intron 30.0%
ATCAGAAGATATGTAAGCTT+TGG - chr3.2:75999118-75999137 None:intergenic 30.0%
ATGGAAAAAAGTCATCAAAG+AGG - chr3.2:75998153-75998172 None:intergenic 30.0%
CAAAATTACCATAATGGCAT+GGG - chr3.2:75998697-75998716 None:intergenic 30.0%
CATGATCAGATTGTGTTAAA+AGG - chr3.2:75997837-75997856 None:intergenic 30.0%
CGTCATCAAAATTACCATAA+TGG - chr3.2:75998703-75998722 None:intergenic 30.0%
CTTACATGACACATTCATAT+TGG - chr3.2:75999372-75999391 None:intergenic 30.0%
GAAAAAAAAAATTAGCCCAG+GGG + chr3.2:75998657-75998676 MS.gene02506:intron 30.0%
GATAAGATTAAGGTAAACCT+TGG - chr3.2:75997343-75997362 None:intergenic 30.0%
GCGAAATCAAGATAAGATTA+AGG - chr3.2:75997353-75997372 None:intergenic 30.0%
GCTTCAGTTTCTACTTTAAT+TGG + chr3.2:75997983-75998002 MS.gene02506:intron 30.0%
GGAAAAAAAAAATTAGCCCA+GGG + chr3.2:75998656-75998675 MS.gene02506:intron 30.0%
TAACTGATTAAACTTTGCAG+GGG + chr3.2:75998757-75998776 MS.gene02506:intron 30.0%
TAACTGATTAAACTTTGCAG+GGG - chr3.2:75998776-75998757 None:intergenic 30.0%
TATAAGATAGAGGTCATGAA+AGG + chr3.2:76000978-76000997 MS.gene02506:intron 30.0%
TCAAAATTACCATAATGGCA+TGG - chr3.2:75998698-75998717 None:intergenic 30.0%
TCAAATTAACACAATGGCAT+GGG + chr3.2:75998416-75998435 MS.gene02506:intron 30.0%
TCATACTCAGGATCAAAATA+TGG - chr3.2:75997295-75997314 None:intergenic 30.0%
TCCCATATGAAATTTGAACA+GGG - chr3.2:75999218-75999237 None:intergenic 30.0%
TCTTAATGTCTTCTATGTGA+GGG + chr3.2:76001631-76001650 MS.gene02506:CDS 30.0%
TGTTCAAATTTCATATGGGA+CGG + chr3.2:75999218-75999237 MS.gene02506:intron 30.0%
TTAAATGGTTCAAATGTCGA+GGG + chr3.2:76000915-76000934 MS.gene02506:intron 30.0%
TTGTACCATCATTGACATAA+AGG - chr3.2:76000454-76000473 None:intergenic 30.0%
TTTAACACAATCTGATCATG+AGG + chr3.2:75997837-75997856 MS.gene02506:intron 30.0%
! AGATACAGCTTTTCTCAATT+TGG + chr3.2:76001085-76001104 MS.gene02506:intron 30.0%
! ATAACTGCCAAAGTTTTCAA+CGG - chr3.2:75999315-75999334 None:intergenic 30.0%
! ATTGGTTTCAGCTAAGATTA+AGG - chr3.2:75997793-75997812 None:intergenic 30.0%
! CAAACTCATCTTAGTTCTTT+CGG + chr3.2:75997687-75997706 MS.gene02506:intron 30.0%
! CAATGTTTGGTAACAAAGTT+CGG - chr3.2:75999566-75999585 None:intergenic 30.0%
! TATGCAATGTAAAAGTATGG+TGG + chr3.2:75999815-75999834 MS.gene02506:intron 30.0%
! TTTTTCATACAATAGGCTCT+AGG + chr3.2:76000224-76000243 MS.gene02506:intron 30.0%
! TTTTTCCTCACAACATTCTA+TGG - chr3.2:76000708-76000727 None:intergenic 30.0%
!! ATTGTGTTAATTTGATGACG+TGG - chr3.2:75998411-75998430 None:intergenic 30.0%
!! TTTGATAGTGTTAACAAACC+TGG + chr3.2:75999042-75999061 MS.gene02506:CDS 30.0%
!! TTTTTCAATTACTCATCGCA+AGG - chr3.2:75999656-75999675 None:intergenic 30.0%
!!! ATTTGATGGTTTTAGGCAAA+AGG - chr3.2:75997410-75997429 None:intergenic 30.0%
!!! TCTTTGATGACTTTTTTCCA+TGG + chr3.2:75998152-75998171 MS.gene02506:intron 30.0%
!!! TTATGGTAATTTTGATGACG+TGG + chr3.2:75998703-75998722 MS.gene02506:intron 30.0%
AAGATTAAGGTAAACCTTGG+AGG - chr3.2:75997340-75997359 None:intergenic 35.0%
AATGATGGTAGATGTGAAGA+AGG + chr3.2:76001718-76001737 MS.gene02506:CDS 35.0%
AATGTTGATCGTGTACCTTT+AGG + chr3.2:76001250-76001269 MS.gene02506:intron 35.0%
ACAAGTGGCTACTTAAAAAG+TGG - chr3.2:75998929-75998948 None:intergenic 35.0%
AGAAATCGGTAAGACAATGA+TGG + chr3.2:76001703-76001722 MS.gene02506:CDS 35.0%
AGATTAAGGTAAACCTTGGA+GGG - chr3.2:75997339-75997358 None:intergenic 35.0%
ATATAGCGATTGAGCTAATC+GGG + chr3.2:76000321-76000340 MS.gene02506:CDS 35.0%
ATATGAAGACTTGAGGAATG+TGG + chr3.2:76001222-76001241 MS.gene02506:intron 35.0%
ATCAATATGGGTGAAACTCA+TGG - chr3.2:76000585-76000604 None:intergenic 35.0%
ATGGTAACCGTTGAAAACTT+TGG + chr3.2:75999305-75999324 MS.gene02506:intron 35.0%
CACACAATCACACACATTTA+TGG + chr3.2:75999880-75999899 MS.gene02506:intron 35.0%
CATATAGCGATTGAGCTAAT+CGG + chr3.2:76000320-76000339 MS.gene02506:CDS 35.0%
CCATAACTGTACACTAATCA+AGG + chr3.2:75998097-75998116 MS.gene02506:CDS 35.0%
CCTTGATTAGTGTACAGTTA+TGG - chr3.2:75998100-75998119 None:intergenic 35.0%
CTCTTAATGTCTTCTATGTG+AGG + chr3.2:76001630-76001649 MS.gene02506:CDS 35.0%
CTTAAATGGTTCAAATGTCG+AGG + chr3.2:76000914-76000933 MS.gene02506:intron 35.0%
GATCGGGATTATGAAAGTTA+TGG + chr3.2:76000632-76000651 MS.gene02506:CDS 35.0%
GCATAAACGTGTGAATTTGA+TGG - chr3.2:75997424-75997443 None:intergenic 35.0%
GCCCTGTTCAAATTTCATAT+GGG + chr3.2:75999214-75999233 MS.gene02506:intron 35.0%
GGAGGATTTGTGTATTCAAA+TGG + chr3.2:76001006-76001025 MS.gene02506:intron 35.0%
GTAGAAACTGAAGCTGAATA+AGG - chr3.2:75997977-75997996 None:intergenic 35.0%
GTCCCATATGAAATTTGAAC+AGG - chr3.2:75999219-75999238 None:intergenic 35.0%
GTTCAAATTTCATATGGGAC+GGG + chr3.2:75999219-75999238 MS.gene02506:intron 35.0%
TAAAAAGTGGTACTCACAGA+GGG - chr3.2:75998916-75998935 None:intergenic 35.0%
TAACAAACCTGGAATTCTAC+TGG + chr3.2:75999053-75999072 MS.gene02506:CDS 35.0%
TAATAGTCAAGAGGTGGTAA+TGG + chr3.2:75999286-75999305 MS.gene02506:intron 35.0%
TATGAGTCATACTCACTGAT+AGG - chr3.2:75999407-75999426 None:intergenic 35.0%
TATTCAAAGAAGAGTAAGCG+AGG + chr3.2:76001355-76001374 MS.gene02506:CDS 35.0%
TCTTCACTTCTTCTTTGTTC+TGG - chr3.2:76000259-76000278 None:intergenic 35.0%
TGAGTTTCACCCATATTGAT+AGG + chr3.2:76000585-76000604 MS.gene02506:CDS 35.0%
TGCCCTGTTCAAATTTCATA+TGG + chr3.2:75999213-75999232 MS.gene02506:intron 35.0%
TGGAAGACTCAAATTCATTG+CGG + chr3.2:76000124-76000143 MS.gene02506:intron 35.0%
TGTGTCCTTTATGTCAATGA+TGG + chr3.2:76000446-76000465 MS.gene02506:CDS 35.0%
TTAAAAAGTGGTACTCACAG+AGG - chr3.2:75998917-75998936 None:intergenic 35.0%
TTGCTGAAATTCTCATACTC+AGG - chr3.2:75997307-75997326 None:intergenic 35.0%
TTGTGAGGAAAAAGGATACT+CGG + chr3.2:76000715-76000734 MS.gene02506:CDS 35.0%
! AAAAAAGGATTAGCGATTGC+AGG + chr3.2:75998784-75998803 MS.gene02506:intron 35.0%
! AAAAAAGGATTAGCGATTGC+AGG - chr3.2:75998803-75998784 None:intergenic 35.0%
! AAAAAGGATTAGCGATTGCA+GGG + chr3.2:75998785-75998804 MS.gene02506:intron 35.0%
! AAAAAGGATTAGCGATTGCA+GGG - chr3.2:75998804-75998785 None:intergenic 35.0%
! ACAAGAATTCTGAGAGAGAA+TGG + chr3.2:76001563-76001582 MS.gene02506:CDS 35.0%
! ACCAAATGTTGTTTGCTGAT+CGG + chr3.2:76000615-76000634 MS.gene02506:CDS 35.0%
! AGAGTGTTAAAGTGTGGTAT+TGG - chr3.2:75999743-75999762 None:intergenic 35.0%
! ATCAGCTACTTTAGAAGTCT+AGG + chr3.2:75998200-75998219 MS.gene02506:intron 35.0%
! ATTCTATGGTAATTTTCGGC+CGG - chr3.2:76000694-76000713 None:intergenic 35.0%
! CACCTTTTCAATGAGATCTA+TGG - chr3.2:76000029-76000048 None:intergenic 35.0%
! CAGCTCAATAACATTTTACG+TGG + chr3.2:76000518-76000537 MS.gene02506:CDS 35.0%
! CTTCTTCTTTGGTAACTTGT+TGG + chr3.2:76001790-76001809 MS.gene02506:CDS 35.0%
! CTTTGGTGATTATGAAGTCA+AGG - chr3.2:75999101-75999120 None:intergenic 35.0%
! GAAGCACTTCGTAAAGAAAT+CGG + chr3.2:76001689-76001708 MS.gene02506:CDS 35.0%
! GCTAAAACTAGCTTCTTCTT+TGG + chr3.2:76001779-76001798 MS.gene02506:CDS 35.0%
! TAACATTTTACGTGGATGTG+AGG + chr3.2:76000526-76000545 MS.gene02506:CDS 35.0%
!! AAAAGAAGTGTCCTCTTTGA+TGG + chr3.2:75998027-75998046 MS.gene02506:intron 35.0%
!! CGTGTGAATTTGATGGTTTT+AGG - chr3.2:75997417-75997436 None:intergenic 35.0%
!! GTTTTAGACGAAAAAGGAAG+AGG + chr3.2:75999717-75999736 MS.gene02506:intron 35.0%
!! TAACTTGTTGGAAAGGTTCT+TGG + chr3.2:76001802-76001821 MS.gene02506:CDS 35.0%
!! TAGACTTCTAAAGTAGCTGA+TGG - chr3.2:75998201-75998220 None:intergenic 35.0%
!! TCTGGTTCTTTGTCATATGT+TGG - chr3.2:76001746-76001765 None:intergenic 35.0%
!! TCTTTGGTAACTTGTTGGAA+AGG + chr3.2:76001795-76001814 MS.gene02506:CDS 35.0%
!!! GCATGAGTTTTAGACGAAAA+AGG + chr3.2:75999711-75999730 MS.gene02506:intron 35.0%
!!! TCTTCTTTGTTCTGGCTTTT+TGG - chr3.2:76000251-76000270 None:intergenic 35.0%
AAATTTCATATGGGACGGGA+CGG + chr3.2:75999223-75999242 MS.gene02506:intron 40.0%
ACATATCTTCTGATGGAGGA+TGG + chr3.2:75999124-75999143 MS.gene02506:CDS 40.0%
AGAATGGCCTAACAGTTTGT+AGG + chr3.2:76001579-76001598 MS.gene02506:CDS 40.0%
AGGTATTAAAACAGCACTCC+CGG - chr3.2:75999636-75999655 None:intergenic 40.0%
ATACAGAAGGGGAGAAAGAA+AGG + chr3.2:76001309-76001328 MS.gene02506:CDS 40.0%
ATATCTCAGACAAGAGACCA+GGG - chr3.2:76000355-76000374 None:intergenic 40.0%
ATGAATTTGAGTCTTCCACG+TGG - chr3.2:76000122-76000141 None:intergenic 40.0%
ATGCACACTTGATACAGAAG+GGG + chr3.2:76001298-76001317 MS.gene02506:CDS 40.0%
ATGGAGAGAAAGTTGCTAGT+AGG + chr3.2:76000549-76000568 MS.gene02506:CDS 40.0%
CAGCTACAACCACGTTAAAA+TGG - chr3.2:76000397-76000416 None:intergenic 40.0%
CCAAACCACAACTCATATAG+AGG - chr3.2:75998178-75998197 None:intergenic 40.0%
CCTCTATATGAGTTGTGGTT+TGG + chr3.2:75998175-75998194 MS.gene02506:intron 40.0%
CTACAACCACGTTAAAATGG+AGG - chr3.2:76000394-76000413 None:intergenic 40.0%
CTCATAGTGCAGTACAGTTT+AGG + chr3.2:75999421-75999440 MS.gene02506:intron 40.0%
CTTTGCAGGGGCAAAAAAAA+AGG + chr3.2:75998769-75998788 MS.gene02506:intron 40.0%
CTTTGCAGGGGCAAAAAAAA+AGG - chr3.2:75998788-75998769 None:intergenic 40.0%
GAAGAAGTGAAGAATTGGTC+AGG + chr3.2:76000266-76000285 MS.gene02506:CDS 40.0%
GAAGAATTGGTCAGGCAAAT+GGG + chr3.2:76000274-76000293 MS.gene02506:CDS 40.0%
GAATGGCCTAACAGTTTGTA+GGG + chr3.2:76001580-76001599 MS.gene02506:CDS 40.0%
GAATTGACGAAAATACCCCT+GGG - chr3.2:75998457-75998438 None:intergenic 40.0%
GAGTGAGACACTACATATGT+TGG - chr3.2:75997510-75997529 None:intergenic 40.0%
GATCAGCAAACAACATTTGG+TGG - chr3.2:76000616-76000635 None:intergenic 40.0%
GATGCACACTTGATACAGAA+GGG + chr3.2:76001297-76001316 MS.gene02506:CDS 40.0%
GCTTACATATCTTCTGATGG+AGG + chr3.2:75999120-75999139 MS.gene02506:CDS 40.0%
GTGACTGATAAGTGAACATG+CGG - chr3.2:76000886-76000905 None:intergenic 40.0%
GTTAAAAGGAGATCGGAGTT+GGG - chr3.2:75997823-75997842 None:intergenic 40.0%
GTTATTCGTCCCTGCAAATA+GGG + chr3.2:75998286-75998305 MS.gene02506:intron 40.0%
GTTATTCGTCCCTGCAAATA+GGG - chr3.2:75998305-75998286 None:intergenic 40.0%
GTTTCACCCATATTGATAGG+CGG + chr3.2:76000588-76000607 MS.gene02506:CDS 40.0%
GTTTCTATCTAACTACCACG+TGG + chr3.2:76000104-76000123 MS.gene02506:intron 40.0%
TACAGAAGGGGAGAAAGAAA+GGG + chr3.2:76001310-76001329 MS.gene02506:CDS 40.0%
TACTTTATTCGGCACATGGA+CGG + chr3.2:76001275-76001294 MS.gene02506:CDS 40.0%
TATCCTTTGCACACAACTCT+AGG - chr3.2:76001520-76001539 None:intergenic 40.0%
TGAAGAATTGGTCAGGCAAA+TGG + chr3.2:76000273-76000292 MS.gene02506:CDS 40.0%
TGTGTTTGAAAAGAGAGAGC+AGG - chr3.2:75999864-75999883 None:intergenic 40.0%
TGTTAAAAGGAGATCGGAGT+TGG - chr3.2:75997824-75997843 None:intergenic 40.0%
TGTTATTCGTCCCTGCAAAT+AGG + chr3.2:75998285-75998304 MS.gene02506:intron 40.0%
TGTTATTCGTCCCTGCAAAT+AGG - chr3.2:75998304-75998285 None:intergenic 40.0%
TTAAACGACCCCTATTTGCA+GGG - chr3.2:75998298-75998317 None:intergenic 40.0%
TTATTCGTCCCTGCAAATAG+GGG + chr3.2:75998287-75998306 MS.gene02506:intron 40.0%
TTATTCGTCCCTGCAAATAG+GGG - chr3.2:75998306-75998287 None:intergenic 40.0%
TTCATGTCACGGATCAACAA+GGG + chr3.2:75999981-76000000 MS.gene02506:CDS 40.0%
TTGGGTGAATGAATCAGTCT+AGG + chr3.2:75999769-75999788 MS.gene02506:intron 40.0%
TTGTGTGCAAAGGATAGAGT+GGG + chr3.2:76001524-76001543 MS.gene02506:CDS 40.0%
TTTAAACGACCCCTATTTGC+AGG - chr3.2:75998299-75998318 None:intergenic 40.0%
TTTCATGTCACGGATCAACA+AGG + chr3.2:75999980-75999999 MS.gene02506:CDS 40.0%
! ATTCTACGGATTTTGGACAC+AGG + chr3.2:76001487-76001506 MS.gene02506:intron 40.0%
! ATTTTACGTGGATGTGAGGA+TGG + chr3.2:76000530-76000549 MS.gene02506:CDS 40.0%
! CCAAATGTTGTTTGCTGATC+GGG + chr3.2:76000616-76000635 MS.gene02506:CDS 40.0%
! GCAGTCATTAACTTGGTCAA+GGG + chr3.2:75998725-75998744 MS.gene02506:intron 40.0%
! TTCTACGGATTTTGGACACA+GGG + chr3.2:76001488-76001507 MS.gene02506:intron 40.0%
AACCACGTTAAAATGGAGGC+TGG - chr3.2:76000390-76000409 None:intergenic 45.0%
AATTGGTCAGGCAAATGGGT+TGG + chr3.2:76000278-76000297 MS.gene02506:CDS 45.0%
ACCACTTCCAGTAGAATTCC+AGG - chr3.2:75999063-75999082 None:intergenic 45.0%
ACCTGGAATTCTACTGGAAG+TGG + chr3.2:75999059-75999078 MS.gene02506:CDS 45.0%
ATCCGATGAGATTGTGGCAT+GGG - chr3.2:76000822-76000841 None:intergenic 45.0%
ATGGAGTAACGACAACAGAC+AGG + chr3.2:76000651-76000670 MS.gene02506:CDS 45.0%
ATGGCAACTAGCATTGTCCA+CGG - chr3.2:75998081-75998100 None:intergenic 45.0%
CACAACTCATATAGAGGCCA+TGG - chr3.2:75998172-75998191 None:intergenic 45.0%
CATGGCCTCTATATGAGTTG+TGG + chr3.2:75998170-75998189 MS.gene02506:intron 45.0%
CCCGATCAGCAAACAACATT+TGG - chr3.2:76000619-76000638 None:intergenic 45.0%
CGTCAATTCCCATGCCATTA+TGG + chr3.2:75998686-75998705 MS.gene02506:intron 45.0%
CTGAAGTGTGGACTCATAAC+AGG + chr3.2:76000414-76000433 MS.gene02506:CDS 45.0%
GATATCTCAGACAAGAGACC+AGG - chr3.2:76000356-76000375 None:intergenic 45.0%
GATGTACCTGCGATGCATAA+GGG - chr3.2:76000847-76000866 None:intergenic 45.0%
GCAACAAAATCAACCCTCCA+AGG + chr3.2:75997323-75997342 MS.gene02506:CDS 45.0%
GGAATTGACGAAAATACCCC+TGG + chr3.2:75998437-75998456 MS.gene02506:intron 45.0%
GGAATTGACGAAAATACCCC+TGG - chr3.2:75998456-75998437 None:intergenic 45.0%
GGAGCAATGTGACAAACAAG+TGG - chr3.2:75998944-75998963 None:intergenic 45.0%
GGATGCACACTTGATACAGA+AGG + chr3.2:76001296-76001315 MS.gene02506:CDS 45.0%
GGTGAAACTCATGGACAAAC+TGG - chr3.2:76000576-76000595 None:intergenic 45.0%
GTTGTGTGCAAAGGATAGAG+TGG + chr3.2:76001523-76001542 MS.gene02506:CDS 45.0%
TACCTGCCCTACAAACTGTT+AGG - chr3.2:76001589-76001608 None:intergenic 45.0%
TAGAGGTCATGAAAGGCTTG+TGG + chr3.2:76000985-76001004 MS.gene02506:intron 45.0%
TCGGAGTTGGGTAGGTAAAT+TGG - chr3.2:75997811-75997830 None:intergenic 45.0%
TCTATGTGAGGGATGCATCA+GGG + chr3.2:76001642-76001661 MS.gene02506:CDS 45.0%
TGACGTGGCAGTCATTAACT+TGG + chr3.2:75998718-75998737 MS.gene02506:intron 45.0%
TGACGTGGCAGTCATTAACT+TGG - chr3.2:75998737-75998718 None:intergenic 45.0%
TGAGGAAAAAGGATACTCGG+TGG + chr3.2:76000718-76000737 MS.gene02506:CDS 45.0%
TGATGTACCTGCGATGCATA+AGG - chr3.2:76000848-76000867 None:intergenic 45.0%
TGGAGTAACGACAACAGACA+GGG + chr3.2:76000652-76000671 MS.gene02506:CDS 45.0%
TTAAGCGACCCCTATTTGCA+GGG + chr3.2:75998816-75998835 MS.gene02506:intron 45.0%
TTCCCATGCCACAATCTCAT+CGG + chr3.2:76000817-76000836 MS.gene02506:CDS 45.0%
TTCTATGTGAGGGATGCATC+AGG + chr3.2:76001641-76001660 MS.gene02506:CDS 45.0%
TTCTGATGGAGGATGGTTCA+TGG + chr3.2:75999131-75999150 MS.gene02506:CDS 45.0%
TTTAAGCGACCCCTATTTGC+AGG + chr3.2:75998815-75998834 MS.gene02506:intron 45.0%
! ATTAAGAGCTTGTTCCCCTC+TGG - chr3.2:76001618-76001637 None:intergenic 45.0%
! ATTGGTCAGGCAAATGGGTT+GGG + chr3.2:76000279-76000298 MS.gene02506:CDS 45.0%
! GGCAGTCATTAACTTGGTCA+AGG + chr3.2:75998724-75998743 MS.gene02506:intron 45.0%
! GTAATTTTCGGCCGGAAAGA+GGG - chr3.2:76000686-76000705 None:intergenic 45.0%
!! TTAAAAGTAAAAAAAAAATT+CGG - chr3.2:75998578-75998597 None:intergenic 5.0%
!! TTAAAATTAAAATGTTTAAT+TGG + chr3.2:75997941-75997960 MS.gene02506:intron 5.0%
!!! TTTATTTTATTTTTGAAATA+CGG + chr3.2:75997656-75997675 MS.gene02506:intron 5.0%
AAAGGAGATCGGAGTTGGGT+AGG - chr3.2:75997819-75997838 None:intergenic 50.0%
AAGAACCAGAGACACGAGGA+TGG + chr3.2:76001756-76001775 MS.gene02506:CDS 50.0%
ACGTGGTTGTAGCTGAAGTG+TGG + chr3.2:76000402-76000421 MS.gene02506:CDS 50.0%
AGAACCAGAGACACGAGGAT+GGG + chr3.2:76001757-76001776 MS.gene02506:CDS 50.0%
AGGGCAGGTATATCAACCAG+AGG + chr3.2:76001599-76001618 MS.gene02506:CDS 50.0%
AGGTCATGAAAGGCTTGTGG+AGG + chr3.2:76000988-76001007 MS.gene02506:intron 50.0%
CGTTAAAATGGAGGCTGGCA+AGG - chr3.2:76000385-76000404 None:intergenic 50.0%
GACAAAGAACCAGAGACACG+AGG + chr3.2:76001752-76001771 MS.gene02506:CDS 50.0%
GAGCCTAGAGTTGTGTGCAA+AGG + chr3.2:76001514-76001533 MS.gene02506:CDS 50.0%
GATCCGATGAGATTGTGGCA+TGG - chr3.2:76000823-76000842 None:intergenic 50.0%
GATGGAGGATGGTTCATGGA+TGG + chr3.2:75999135-75999154 MS.gene02506:CDS 50.0%
GGCAGGTATATCAACCAGAG+GGG + chr3.2:76001601-76001620 MS.gene02506:CDS 50.0%
GGGCAGGTATATCAACCAGA+GGG + chr3.2:76001600-76001619 MS.gene02506:CDS 50.0%
GTGGAGCCGCCTATCAATAT+GGG - chr3.2:76000597-76000616 None:intergenic 50.0%
TGACCACATCTCCGACTACA+GGG - chr3.2:75999536-75999555 None:intergenic 50.0%
TGATGGTACAAGACAAGCCG+TGG + chr3.2:76000463-76000482 MS.gene02506:CDS 50.0%
! GGTAATTTTCGGCCGGAAAG+AGG - chr3.2:76000687-76000706 None:intergenic 50.0%
!! TGCCAGCCTCCATTTTAACG+TGG + chr3.2:76000385-76000404 MS.gene02506:CDS 50.0%
!! TTGGTCAGGCAAATGGGTTG+GGG + chr3.2:76000280-76000299 MS.gene02506:CDS 50.0%
AGGGCGATCCGATGAGATTG+TGG - chr3.2:76000828-76000847 None:intergenic 55.0%
AGTTGTGGCCACCCTGTAGT+CGG + chr3.2:75999522-75999541 MS.gene02506:intron 55.0%
GGATGCATCAGGGAACTCAG+TGG + chr3.2:76001652-76001671 MS.gene02506:CDS 55.0%
GGCCTAACAGTTTGTAGGGC+AGG + chr3.2:76001584-76001603 MS.gene02506:CDS 55.0%
GGGAATGTCCTCCCTCTTTC+CGG + chr3.2:76000672-76000691 MS.gene02506:CDS 55.0%
GGGACGGGACGGTTGTAAAA+TGG + chr3.2:75999234-75999253 MS.gene02506:intron 55.0%
GGTGGAGCCGCCTATCAATA+TGG - chr3.2:76000598-76000617 None:intergenic 55.0%
GTGACCACATCTCCGACTAC+AGG - chr3.2:75999537-75999556 None:intergenic 55.0%
TCTCAGACAAGAGACCAGGG+CGG - chr3.2:76000352-76000371 None:intergenic 55.0%
TGGTACTCACAGAGGGCTAG+TGG - chr3.2:75998909-75998928 None:intergenic 55.0%
TGTACTTTGCAGGGTCTCCG+TGG + chr3.2:75998061-75998080 MS.gene02506:intron 55.0%
TTAGCCCATCCTCGTGTCTC+TGG - chr3.2:76001764-76001783 None:intergenic 55.0%
! ATTTTCGGCCGGAAAGAGGG+AGG - chr3.2:76000683-76000702 None:intergenic 55.0%
! TGGGTTGGGGTGCATTCTGT+TGG + chr3.2:76000293-76000312 MS.gene02506:CDS 55.0%
CCACATCTCCGACTACAGGG+TGG - chr3.2:75999533-75999552 None:intergenic 60.0%
CCACCCTGTAGTCGGAGATG+TGG + chr3.2:75999530-75999549 MS.gene02506:intron 60.0%
GGATCGCCCTTATGCATCGC+AGG + chr3.2:76000838-76000857 MS.gene02506:CDS 60.0%
CTAATCGGGAGAGACCGCCC+TGG + chr3.2:76000335-76000354 MS.gene02506:CDS 65.0%


Chromosome Type Strat End Strand Name
chr3.2 gene 75997274 76001829 75997274 ID=MS.gene02506
chr3.2 mRNA 75997274 76001829 75997274 ID=MS.gene02506.t1;Parent=MS.gene02506
chr3.2 exon 75997274 75997344 75997274 ID=MS.gene02506.t1.exon1;Parent=MS.gene02506.t1
chr3.2 CDS 75997274 75997344 75997274 ID=cds.MS.gene02506.t1;Parent=MS.gene02506.t1
chr3.2 exon 75998073 75998118 75998073 ID=MS.gene02506.t1.exon2;Parent=MS.gene02506.t1
chr3.2 CDS 75998073 75998118 75998073 ID=cds.MS.gene02506.t1;Parent=MS.gene02506.t1
chr3.2 exon 75999042 75999156 75999042 ID=MS.gene02506.t1.exon3;Parent=MS.gene02506.t1
chr3.2 CDS 75999042 75999156 75999042 ID=cds.MS.gene02506.t1;Parent=MS.gene02506.t1
chr3.2 exon 75999978 76000045 75999978 ID=MS.gene02506.t1.exon4;Parent=MS.gene02506.t1
chr3.2 CDS 75999978 76000045 75999978 ID=cds.MS.gene02506.t1;Parent=MS.gene02506.t1
chr3.2 exon 76000239 76000859 76000239 ID=MS.gene02506.t1.exon5;Parent=MS.gene02506.t1
chr3.2 CDS 76000239 76000859 76000239 ID=cds.MS.gene02506.t1;Parent=MS.gene02506.t1
chr3.2 exon 76001272 76001376 76001272 ID=MS.gene02506.t1.exon6;Parent=MS.gene02506.t1
chr3.2 CDS 76001272 76001376 76001272 ID=cds.MS.gene02506.t1;Parent=MS.gene02506.t1
chr3.2 exon 76001509 76001829 76001509 ID=MS.gene02506.t1.exon7;Parent=MS.gene02506.t1
chr3.2 CDS 76001509 76001829 76001509 ID=cds.MS.gene02506.t1;Parent=MS.gene02506.t1
Gene Sequence

>MS.gene02506

ATGGCTGCAGTTTGTTGGCCATATTTTGATCCTGAGTATGAGAATTTCAGCAACAAAATCAACCCTCCAAGGTTTACCTTAATCTTATCTTGATTTCGCTATGCTTTAAAATTTAACCAAATATGGTAATATTCCTTTTGCCTAAAACCATCAAATTCACACGTTTATGCAAATATTTTAATTTTCATGTACTGTATTATAGATTTCAAATATAAAATACTTTTGTAAGGAGACCAACATATGTAGTGTCTCACTCGCAGTACTATCTTTGCAAGACTTTGTACCATTTATGAGAAATTGATGTATAGACTAACTTGTCATTTAAAAACTTAAATTATTTAAATATCTCATATCCTTCTCTTTTTTTAACAGAGCTCTCAATTTTATTTTATTTTTGAAATACGGAGAGAATTCAAACTCATCTTAGTTCTTTCGGTCTCTTTATTCTTTTTTGAAACATACAATGTTAGTAATTAGTTATTAGATTAATATTTTTCTTCTTCCTATGAGTTTGAACCTTAATCTTAGCTGAAACCAATTTACCTACCCAACTCCGATCTCCTTTTAACACAATCTGATCATGAGGAGAGCAAAGAACAAAATCGAATCATCTTGTACAGAGCCAAAATATTACTACACAAAGTGGTCACTTAAATGCTTCAATTTTTTAAAATTAAAATGTTTAATTGGTAAAATTCAACCTTATTCAGCTTCAGTTTCTACTTTAATTGGTAAAAAAAAATTTAAGAGACAAAAAGAAGTGTCCTCTTTGATGGTAAACTTCATTTGTACTTTGCAGGGTCTCCGTGGACAATGCTAGTTGCCATAACTGTACACTAATCAAGGTACGTATAATTTCTAAATTAAAAGAAGTGTCCTCTTTGATGACTTTTTTCCATGGCCTCTATATGAGTTGTGGTTTGGCCATCAGCTACTTTAGAAGTCTAGGTTGTGTTGTTTTTTAAGTTTCTTGACCCCTAGAGTTTTTCTATTTTTACAAAGGCTTAAATATGTTATTCGTCCCTGCAAATAGGGGTCGTTTAAAATTTCGTCCCTGCAATCGCTAATCCTTTTTTTTTGCCCCTGCAAAGTTTAATCAGTTAAATATTCGTACATTGACCAAGTTAATGACTGCCACGTCATCAAATTAACACAATGGCATGGGAATTGACGAAAATACCCCTGGCTTATTTTTTTTTTTTGTTTTTTTTCCTTCAAAAAAAAAAATTCAGTTTTTTCCCAAATTTTTTTTGCGATTTTTTCCCCGAAAATTTTTCAGTTTTAATTTTAACAGTTTTTTTCCGAATTTTTTTTTTACTTTTAATTATTTTTTTAATATAAAAAAGAATTTTCAAAATTTTGAAAAAAAAAAAATTTTTGAAGGAAAAAAAAAATTAGCCCAGGGGTATTTTCGTCAATTCCCATGCCATTATGGTAATTTTGATGACGTGGCAGTCATTAACTTGGTCAAGGGACGAATTTTTAACTGATTAAACTTTGCAGGGGCAAAAAAAAAGGATTAGCGATTGCAGGGACGAAATTTTAAGCGACCCCTATTTGCAGGGACGAATAACATATTTAAGCCTTTTACAAATTATATTCAATTTTCAAACTTATAGGTTAAATGATATTCCACTAGCCCTCTGTGAGTACCACTTTTTAAGTAGCCACTTGTTTGTCACATTGCTCCTTTATTGTTTCATAAAGAATCATTTATTTGGAGATTAGTATATGCAATTTTTCACTACTGCATTTTTATTATATGCAGTTTGATAGTGTTAACAAACCTGGAATTCTACTGGAAGTGGTGCAAATCTTGACAGACCTTGACTTCATAATCACCAAAGCTTACATATCTTCTGATGGAGGATGGTTCATGGATGGTATGTTTCTCATTAATTTAACTTTCTTTCCAAAATTCATTAGCTACAAAGATATGTGCCCTGTTCAAATTTCATATGGGACGGGACGGTTGTAAAATGGTCATAAGTATTAAGTGTCGCCGTTATTAATAATAGTCAAGAGGTGGTAATGGTAACCGTTGAAAACTTTGGCAGTTATTAAGCTGTTCTTCATTATTATCATTTCTATCTTGCCAATATGAATGTGTCATGTAAGTATCAAGTAATTCCTATCAGTGAGTATGACTCATAGTGCAGTACAGTTTAGGAGTAATGTTGTAATATGGCCTTAGTGTTAAAATACAAGTTGTACACTGTAAACCCTAAGCTTGAAAAAATAGAAAGAAAGTTGTGGCCACCCTGTAGTCGGAGATGTGGTCACAATTAGCCGAACTTTGTTACCAAACATTGTGTATATCTGTGTTTGTGTTTTTGTATCTTTTTTTTTTTTTTTTGAACCGGGAGTGCTGTTTTAATACCTTGCGATGAGTAATTGAAAAAAACGGCACTTGTATGCCTATCATAAAAATGAAATGGCATGAGTTTTAGACGAAAAAGGAAGAGGCCAATACCACACTTTAACACTCTTTATTATTGGGTGAATGAATCAGTCTAGGTATTCTAGTGAGACTCATGAAATTATGCAATGTAAAAGTATGGTGGTAACATTAGTATTCATTCATATACCTGCTCTCTCTTTTCAAACACACAATCACACACATTTATGGTTATGTGTTCTTGAATATTCCCTACTTGATACAAGTATTTAAGCTGCTAACTTATTCACCGATTGATATATACAGTATTTCATGTCACGGATCAACAAGGGAAAAAGATAACAGATAGCAAAACCATAGATCTCATTGAAAAGGTGTACATATCTTCTTTCTCTAACATATGCATCTGATATATTCATTTATCAAGATATGGTTTCTATCTAACTACCACGTGGAAGACTCAAATTCATTGCGGAAAAATTGAACTAGCACAATTCTTTCAATATATGTATAAATAAATTTTTCAAGGGAATAATTGCTACCTGTTAACAGTTTTTCATACAATAGGCTCTAGGACCAAAAAGCCAGAACAAAGAAGAAGTGAAGAATTGGTCAGGCAAATGGGTTGGGGTGCATTCTGTTGGTGATCATATAGCGATTGAGCTAATCGGGAGAGACCGCCCTGGTCTCTTGTCTGAGATATCAGCTGTCCTTGCCAGCCTCCATTTTAACGTGGTTGTAGCTGAAGTGTGGACTCATAACAGGAGAATAGCTTGTGTCCTTTATGTCAATGATGGTACAAGACAAGCCGTGGATGATCAAAAAAGAATATCTCTTATGGAGGAGCAGCTCAATAACATTTTACGTGGATGTGAGGATGGAGAGAAAGTTGCTAGTAGGACCAGTTTGTCCATGAGTTTCACCCATATTGATAGGCGGCTCCACCAAATGTTGTTTGCTGATCGGGATTATGAAAGTTATGGAGTAACGACAACAGACAGGGAATGTCCTCCCTCTTTCCGGCCGAAAATTACCATAGAATGTTGTGAGGAAAAAGGATACTCGGTGGTGAATGTCAGATGCAAAGATCGCGCAAAACTCATGTTTGACATTGTTTGCACTCTTACTGATATGCAATATGTTGTTTCCCATGCCACAATCTCATCGGATCGCCCTTATGCATCGCAGGTACATCACATTAATATTCATTTCCGCATGTTCACTTATCAGTCACACATAGTACTTAAATGGTTCAAATGTCGAGGGTACAACTAGTTAATTTGTCTGATTTCTAAAGAATTTTTTCTATAAGATAGAGGTCATGAAAGGCTTGTGGAGGATTTGTGTATTCAAATGGCCTTACATAGAAACAGAATAATGTTTTGCAGACAAAACAGATATCTTGAACTTTGAAGATACAGCTTTTCTCAATTTGGTTTTCCTACTAATTTTGTTTATTGGACCCTTGTTTGTCTGAAAATTATTTAACATGATTATTCCAAAATGTTACAAGAATAAATTCTCACTTGGATTAATTTAGGAAATTAGAAATATGAAGACTTGAGGAATGTGGATTACAATGTTGATCGTGTACCTTTAGGAATACTTTATTCGGCACATGGACGGATGCACACTTGATACAGAAGGGGAGAAAGAAAGGGTCATCAAATGCATTGAAGCTGCTATTCAAAGAAGAGTAAGCGAGGTAACTTACAGATTAAAATTGATTTCAGCTAGCAAGTCTTCCACGATTTGTGAAAGAACTTTTTTTTCTTCTTCTTCAAGAAACGAAGAATGTCTTAGTCTTAGTATTAAATTCTACGGATTTTGGACACAGGGTGTGAGCCTAGAGTTGTGTGCAAAGGATAGAGTGGGATTGCTCTCTGAAGTAACAAGAATTCTGAGAGAGAATGGCCTAACAGTTTGTAGGGCAGGTATATCAACCAGAGGGGAACAAGCTCTTAATGTCTTCTATGTGAGGGATGCATCAGGGAACTCAGTGGACATGAAGACTATAGAAGCACTTCGTAAAGAAATCGGTAAGACAATGATGGTAGATGTGAAGAAGGTACCAACATATGACAAAGAACCAGAGACACGAGGATGGGCTAAAACTAGCTTCTTCTTTGGTAACTTGTTGGAAAGGTTCTTGGCTTAA

Protein sequence

>MS.gene02506.t1

MAAVCWPYFDPEYENFSNKINPPRVSVDNASCHNCTLIKFDSVNKPGILLEVVQILTDLDFIITKAYISSDGGWFMDVFHVTDQQGKKITDSKTIDLIEKALGPKSQNKEEVKNWSGKWVGVHSVGDHIAIELIGRDRPGLLSEISAVLASLHFNVVVAEVWTHNRRIACVLYVNDGTRQAVDDQKRISLMEEQLNNILRGCEDGEKVASRTSLSMSFTHIDRRLHQMLFADRDYESYGVTTTDRECPPSFRPKITIECCEEKGYSVVNVRCKDRAKLMFDIVCTLTDMQYVVSHATISSDRPYASQEYFIRHMDGCTLDTEGEKERVIKCIEAAIQRRVSEGVSLELCAKDRVGLLSEVTRILRENGLTVCRAGISTRGEQALNVFYVRDASGNSVDMKTIEALRKEIGKTMMVDVKKVPTYDKEPETRGWAKTSFFFGNLLERFLA