Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene02506.t1 | XP_013461355.1 | 96.7 | 448 | 15 | 0 | 1 | 448 | 1 | 448 | 4.60E-251 | 876.7 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene02506.t1 | O49285 | 72.9 | 454 | 114 | 4 | 1 | 447 | 1 | 452 | 2.5e-189 | 662.9 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene02506.t1 | A0A072VB68 | 96.7 | 448 | 15 | 0 | 1 | 448 | 1 | 448 | 3.3e-251 | 876.7 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene011698 | MS.gene02506 | PPI |
MS.gene20314 | MS.gene02506 | PPI |
MS.gene02506 | MS.gene43525 | PPI |
MS.gene09616 | MS.gene02506 | PPI |
MS.gene44446 | MS.gene02506 | PPI |
MS.gene60184 | MS.gene02506 | PPI |
MS.gene015275 | MS.gene02506 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene02506.t1 | MTR_3g088885 | 96.652 | 448 | 15 | 0 | 1 | 448 | 1 | 448 | 0.0 | 898 |
MS.gene02506.t1 | MTR_1g029520 | 81.395 | 430 | 72 | 6 | 25 | 447 | 254 | 682 | 0.0 | 703 |
MS.gene02506.t1 | MTR_7g022470 | 53.604 | 444 | 189 | 9 | 9 | 447 | 10 | 441 | 7.32e-155 | 447 |
MS.gene02506.t1 | MTR_5g047260 | 55.422 | 415 | 172 | 5 | 8 | 421 | 16 | 418 | 9.61e-155 | 446 |
MS.gene02506.t1 | MTR_7g028050 | 48.984 | 443 | 213 | 7 | 9 | 446 | 1 | 435 | 1.48e-140 | 410 |
MS.gene02506.t1 | MTR_4g101950 | 49.161 | 417 | 191 | 6 | 6 | 421 | 3 | 399 | 1.80e-132 | 389 |
MS.gene02506.t1 | MTR_5g011580 | 45.657 | 449 | 217 | 8 | 6 | 447 | 3 | 431 | 4.89e-129 | 380 |
MS.gene02506.t1 | MTR_5g015170 | 46.083 | 434 | 211 | 9 | 1 | 415 | 1 | 430 | 5.79e-127 | 377 |
MS.gene02506.t1 | MTR_5g047260 | 52.661 | 357 | 156 | 5 | 8 | 363 | 16 | 360 | 6.61e-122 | 359 |
MS.gene02506.t1 | MTR_4g097380 | 42.005 | 419 | 232 | 5 | 7 | 415 | 26 | 443 | 4.29e-115 | 347 |
MS.gene02506.t1 | MTR_5g047260 | 53.770 | 305 | 129 | 4 | 8 | 311 | 16 | 309 | 1.74e-104 | 313 |
MS.gene02506.t1 | MTR_7g028050 | 49.398 | 332 | 159 | 6 | 120 | 446 | 5 | 332 | 1.21e-99 | 301 |
MS.gene02506.t1 | MTR_1g012740 | 50.000 | 100 | 44 | 1 | 278 | 377 | 54 | 147 | 4.16e-24 | 98.6 |
MS.gene02506.t1 | MTR_1g012740 | 31.333 | 150 | 75 | 5 | 6 | 149 | 7 | 134 | 5.63e-13 | 67.4 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene02506.t1 | AT1G76990 | 72.907 | 454 | 114 | 4 | 1 | 447 | 1 | 452 | 0.0 | 679 |
MS.gene02506.t1 | AT1G76990 | 72.907 | 454 | 114 | 4 | 1 | 447 | 1 | 452 | 0.0 | 679 |
MS.gene02506.t1 | AT1G76990 | 72.907 | 454 | 114 | 4 | 1 | 447 | 1 | 452 | 0.0 | 679 |
MS.gene02506.t1 | AT1G76990 | 72.907 | 454 | 114 | 4 | 1 | 447 | 1 | 452 | 0.0 | 679 |
MS.gene02506.t1 | AT1G76990 | 72.907 | 454 | 114 | 4 | 1 | 447 | 1 | 452 | 0.0 | 679 |
MS.gene02506.t1 | AT1G69040 | 51.936 | 439 | 200 | 5 | 9 | 444 | 7 | 437 | 2.94e-148 | 430 |
MS.gene02506.t1 | AT1G69040 | 51.936 | 439 | 200 | 5 | 9 | 444 | 11 | 441 | 3.26e-148 | 430 |
MS.gene02506.t1 | AT2G03730 | 50.000 | 452 | 208 | 8 | 4 | 445 | 3 | 446 | 2.92e-144 | 420 |
MS.gene02506.t1 | AT2G03730 | 50.000 | 452 | 208 | 8 | 4 | 445 | 3 | 446 | 2.92e-144 | 420 |
MS.gene02506.t1 | AT5G25320 | 47.903 | 453 | 204 | 9 | 1 | 422 | 1 | 452 | 8.27e-144 | 420 |
MS.gene02506.t1 | AT3G01990 | 51.724 | 406 | 176 | 8 | 10 | 410 | 17 | 407 | 1.44e-135 | 397 |
MS.gene02506.t1 | AT3G01990 | 51.724 | 406 | 176 | 8 | 10 | 410 | 17 | 407 | 1.44e-135 | 397 |
MS.gene02506.t1 | AT3G01990 | 51.724 | 406 | 176 | 8 | 10 | 410 | 3 | 393 | 1.53e-135 | 397 |
MS.gene02506.t1 | AT3G01990 | 51.724 | 406 | 176 | 8 | 10 | 410 | 3 | 393 | 1.53e-135 | 397 |
MS.gene02506.t1 | AT3G01990 | 51.724 | 406 | 176 | 8 | 10 | 410 | 17 | 407 | 1.79e-135 | 397 |
MS.gene02506.t1 | AT3G01990 | 51.724 | 406 | 176 | 8 | 10 | 410 | 3 | 393 | 3.14e-135 | 396 |
MS.gene02506.t1 | AT5G25320 | 47.585 | 414 | 187 | 7 | 38 | 422 | 1 | 413 | 9.88e-128 | 378 |
MS.gene02506.t1 | AT1G12420 | 48.077 | 416 | 196 | 8 | 8 | 422 | 6 | 402 | 3.78e-121 | 360 |
MS.gene02506.t1 | AT4G22780 | 48.507 | 402 | 183 | 7 | 12 | 410 | 9 | 389 | 9.76e-121 | 360 |
MS.gene02506.t1 | AT4G22780 | 48.507 | 402 | 183 | 7 | 12 | 410 | 9 | 389 | 9.76e-121 | 360 |
MS.gene02506.t1 | AT5G65890 | 40.860 | 465 | 248 | 7 | 7 | 446 | 8 | 470 | 4.32e-111 | 336 |
MS.gene02506.t1 | AT5G65890 | 40.860 | 465 | 248 | 7 | 7 | 446 | 8 | 470 | 4.32e-111 | 336 |
MS.gene02506.t1 | AT5G25320 | 46.113 | 373 | 170 | 8 | 1 | 342 | 1 | 373 | 1.76e-108 | 326 |
MS.gene02506.t1 | AT3G01990 | 50.437 | 343 | 150 | 8 | 10 | 347 | 17 | 344 | 1.50e-106 | 320 |
MS.gene02506.t1 | AT3G01990 | 50.437 | 343 | 150 | 8 | 10 | 347 | 3 | 330 | 1.90e-106 | 319 |
MS.gene02506.t1 | AT3G01990 | 50.888 | 338 | 146 | 8 | 10 | 342 | 17 | 339 | 2.85e-106 | 319 |
MS.gene02506.t1 | AT1G12420 | 46.552 | 348 | 167 | 7 | 76 | 422 | 1 | 330 | 3.54e-93 | 286 |
MS.gene02506.t1 | AT5G65890 | 38.810 | 420 | 230 | 7 | 52 | 446 | 1 | 418 | 1.67e-91 | 284 |
MS.gene02506.t1 | AT5G65890 | 38.810 | 420 | 230 | 7 | 52 | 446 | 1 | 418 | 1.67e-91 | 284 |
MS.gene02506.t1 | AT3G01990 | 48.896 | 317 | 142 | 8 | 10 | 321 | 17 | 318 | 1.75e-87 | 270 |
MS.gene02506.t1 | AT3G01990 | 48.896 | 317 | 142 | 8 | 10 | 321 | 3 | 304 | 1.92e-87 | 269 |
MS.gene02506.t1 | AT5G65890 | 36.994 | 346 | 194 | 6 | 123 | 446 | 13 | 356 | 3.57e-69 | 224 |
Find 112 sgRNAs with CRISPR-Local
Find 316 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCTTCACTTCTTCTTTGTTC+TGG | 0.217028 | 3.2:-76000256 | None:intergenic |
CCAAATGTTGTTTGCTGATC+GGG | 0.257041 | 3.2:+76000616 | MS.gene02506:CDS |
TAACTTGTTGGAAAGGTTCT+TGG | 0.291999 | 3.2:+76001802 | MS.gene02506:CDS |
ACCTTTAGGAATACTTTATT+CGG | 0.293495 | 3.2:+76001264 | MS.gene02506:intron |
GGTGGAGCCGCCTATCAATA+TGG | 0.298908 | 3.2:-76000595 | None:intergenic |
GGGAATGTCCTCCCTCTTTC+CGG | 0.308334 | 3.2:+76000672 | MS.gene02506:CDS |
GCTAAAACTAGCTTCTTCTT+TGG | 0.325528 | 3.2:+76001779 | MS.gene02506:CDS |
ATTGGTCAGGCAAATGGGTT+GGG | 0.336152 | 3.2:+76000279 | MS.gene02506:CDS |
CAGCTACAACCACGTTAAAA+TGG | 0.336988 | 3.2:-76000394 | None:intergenic |
TCATACTCAGGATCAAAATA+TGG | 0.343119 | 3.2:-75997292 | None:intergenic |
CTTCTTCTTTGGTAACTTGT+TGG | 0.350472 | 3.2:+76001790 | MS.gene02506:CDS |
ATAGAATGTTGTGAGGAAAA+AGG | 0.357579 | 3.2:+76000707 | MS.gene02506:CDS |
ACCACTTCCAGTAGAATTCC+AGG | 0.366064 | 3.2:-75999060 | None:intergenic |
CCCGATCAGCAAACAACATT+TGG | 0.373612 | 3.2:-76000616 | None:intergenic |
CATATAGCGATTGAGCTAAT+CGG | 0.383863 | 3.2:+76000320 | MS.gene02506:CDS |
ACAAAGAAGAAGTGAAGAAT+TGG | 0.384276 | 3.2:+76000261 | MS.gene02506:CDS |
TTAGCCCATCCTCGTGTCTC+TGG | 0.409686 | 3.2:-76001761 | None:intergenic |
TTGTACCATCATTGACATAA+AGG | 0.411329 | 3.2:-76000451 | None:intergenic |
CTGAAGTGTGGACTCATAAC+AGG | 0.416112 | 3.2:+76000414 | MS.gene02506:CDS |
ATCAGAAGATATGTAAGCTT+TGG | 0.416198 | 3.2:-75999115 | None:intergenic |
TGAGTTTCACCCATATTGAT+AGG | 0.418165 | 3.2:+76000585 | MS.gene02506:CDS |
TGAAGAATTGGTCAGGCAAA+TGG | 0.419920 | 3.2:+76000273 | MS.gene02506:CDS |
TCTGGTTCTTTGTCATATGT+TGG | 0.422147 | 3.2:-76001743 | None:intergenic |
CCTTGATTAGTGTACAGTTA+TGG | 0.426480 | 3.2:-75998097 | None:intergenic |
TTCTGATGGAGGATGGTTCA+TGG | 0.433562 | 3.2:+75999131 | MS.gene02506:CDS |
TTCTATGTGAGGGATGCATC+AGG | 0.435247 | 3.2:+76001641 | MS.gene02506:CDS |
TTGCTGAAATTCTCATACTC+AGG | 0.439597 | 3.2:-75997304 | None:intergenic |
GAAGCACTTCGTAAAGAAAT+CGG | 0.445977 | 3.2:+76001689 | MS.gene02506:CDS |
TTAGAATGGCTGCAGTTTGT+TGG | 0.449593 | 3.2:+75997269 | None:intergenic |
GGTGAAACTCATGGACAAAC+TGG | 0.453115 | 3.2:-76000573 | None:intergenic |
AACCATAGATCTCATTGAAA+AGG | 0.459867 | 3.2:+76000024 | MS.gene02506:CDS |
GATCGGGATTATGAAAGTTA+TGG | 0.463149 | 3.2:+76000632 | MS.gene02506:CDS |
ATTAAGAGCTTGTTCCCCTC+TGG | 0.467903 | 3.2:-76001615 | None:intergenic |
AGAATGGCCTAACAGTTTGT+AGG | 0.468609 | 3.2:+76001579 | MS.gene02506:CDS |
ATACAGAAGGGGAGAAAGAA+AGG | 0.470876 | 3.2:+76001309 | MS.gene02506:CDS |
GGCCTAACAGTTTGTAGGGC+AGG | 0.474532 | 3.2:+76001584 | MS.gene02506:CDS |
TCTTTGGTAACTTGTTGGAA+AGG | 0.475792 | 3.2:+76001795 | MS.gene02506:CDS |
ACCAAATGTTGTTTGCTGAT+CGG | 0.476294 | 3.2:+76000615 | MS.gene02506:CDS |
TAACAAACCTGGAATTCTAC+TGG | 0.480298 | 3.2:+75999053 | MS.gene02506:CDS |
ATCAATATGGGTGAAACTCA+TGG | 0.480529 | 3.2:-76000582 | None:intergenic |
ATATAGCGATTGAGCTAATC+GGG | 0.490571 | 3.2:+76000321 | MS.gene02506:CDS |
GAAGAAGTGAAGAATTGGTC+AGG | 0.491176 | 3.2:+76000266 | MS.gene02506:CDS |
AATTGGTCAGGCAAATGGGT+TGG | 0.499259 | 3.2:+76000278 | MS.gene02506:CDS |
ACAAGAATTCTGAGAGAGAA+TGG | 0.499775 | 3.2:+76001563 | MS.gene02506:CDS |
TGGGTTGGGGTGCATTCTGT+TGG | 0.500255 | 3.2:+76000293 | MS.gene02506:CDS |
CCATAACTGTACACTAATCA+AGG | 0.500495 | 3.2:+75998097 | MS.gene02506:CDS |
TACTTTATTCGGCACATGGA+CGG | 0.504584 | 3.2:+76001275 | MS.gene02506:CDS |
ATGGAGAGAAAGTTGCTAGT+AGG | 0.510505 | 3.2:+76000549 | MS.gene02506:CDS |
TGATGTACCTGCGATGCATA+AGG | 0.510772 | 3.2:-76000845 | None:intergenic |
ATCCGATGAGATTGTGGCAT+GGG | 0.515862 | 3.2:-76000819 | None:intergenic |
GAAGAATTGGTCAGGCAAAT+GGG | 0.517093 | 3.2:+76000274 | MS.gene02506:CDS |
ACCTGGAATTCTACTGGAAG+TGG | 0.521746 | 3.2:+75999059 | MS.gene02506:CDS |
CGTTAAAATGGAGGCTGGCA+AGG | 0.523869 | 3.2:-76000382 | None:intergenic |
TGTGTCCTTTATGTCAATGA+TGG | 0.524064 | 3.2:+76000446 | MS.gene02506:CDS |
GTGGAGCCGCCTATCAATAT+GGG | 0.526124 | 3.2:-76000594 | None:intergenic |
TATCCTTTGCACACAACTCT+AGG | 0.530398 | 3.2:-76001517 | None:intergenic |
TTTGATAGTGTTAACAAACC+TGG | 0.530560 | 3.2:+75999042 | MS.gene02506:CDS |
AAGATTAAGGTAAACCTTGG+AGG | 0.533637 | 3.2:-75997337 | None:intergenic |
GATCAGCAAACAACATTTGG+TGG | 0.537075 | 3.2:-76000613 | None:intergenic |
ATGGAGTAACGACAACAGAC+AGG | 0.537588 | 3.2:+76000651 | MS.gene02506:CDS |
AAAGCTTACATATCTTCTGA+TGG | 0.539350 | 3.2:+75999117 | MS.gene02506:CDS |
GTTGTGTGCAAAGGATAGAG+TGG | 0.544908 | 3.2:+76001523 | MS.gene02506:CDS |
ACATATCTTCTGATGGAGGA+TGG | 0.557362 | 3.2:+75999124 | MS.gene02506:CDS |
GAATGGCCTAACAGTTTGTA+GGG | 0.559276 | 3.2:+76001580 | MS.gene02506:CDS |
TTGTGTGCAAAGGATAGAGT+GGG | 0.560363 | 3.2:+76001524 | MS.gene02506:CDS |
GATATCTCAGACAAGAGACC+AGG | 0.560821 | 3.2:-76000353 | None:intergenic |
TTGGTCAGGCAAATGGGTTG+GGG | 0.568849 | 3.2:+76000280 | MS.gene02506:CDS |
CTCTTAATGTCTTCTATGTG+AGG | 0.569159 | 3.2:+76001630 | MS.gene02506:CDS |
AAGAACCAGAGACACGAGGA+TGG | 0.572425 | 3.2:+76001756 | MS.gene02506:CDS |
AGAAATCGGTAAGACAATGA+TGG | 0.575183 | 3.2:+76001703 | MS.gene02506:CDS |
GCAACAAAATCAACCCTCCA+AGG | 0.576070 | 3.2:+75997323 | MS.gene02506:CDS |
GGAATACTTTATTCGGCACA+TGG | 0.576960 | 3.2:+76001271 | MS.gene02506:intron |
GGATGCACACTTGATACAGA+AGG | 0.577234 | 3.2:+76001296 | MS.gene02506:CDS |
AATGATGGTAGATGTGAAGA+AGG | 0.579827 | 3.2:+76001718 | MS.gene02506:CDS |
AACCACGTTAAAATGGAGGC+TGG | 0.580495 | 3.2:-76000387 | None:intergenic |
CTTTGGTGATTATGAAGTCA+AGG | 0.580969 | 3.2:-75999098 | None:intergenic |
AGATTAAGGTAAACCTTGGA+GGG | 0.581667 | 3.2:-75997336 | None:intergenic |
TTCCCATGCCACAATCTCAT+CGG | 0.582164 | 3.2:+76000817 | MS.gene02506:CDS |
AGGGCGATCCGATGAGATTG+TGG | 0.584876 | 3.2:-76000825 | None:intergenic |
GGATCGCCCTTATGCATCGC+AGG | 0.593884 | 3.2:+76000838 | MS.gene02506:CDS |
TGATGGTACAAGACAAGCCG+TGG | 0.600705 | 3.2:+76000463 | MS.gene02506:CDS |
TACCTGCCCTACAAACTGTT+AGG | 0.606101 | 3.2:-76001586 | None:intergenic |
ATATACAGTATTTCATGTCA+CGG | 0.612062 | 3.2:+75999970 | MS.gene02506:intron |
TCTTAATGTCTTCTATGTGA+GGG | 0.617321 | 3.2:+76001631 | MS.gene02506:CDS |
GGGCAGGTATATCAACCAGA+GGG | 0.617488 | 3.2:+76001600 | MS.gene02506:CDS |
GATGTACCTGCGATGCATAA+GGG | 0.618291 | 3.2:-76000844 | None:intergenic |
GCTTACATATCTTCTGATGG+AGG | 0.624587 | 3.2:+75999120 | MS.gene02506:CDS |
TTTCATGTCACGGATCAACA+AGG | 0.626341 | 3.2:+75999980 | MS.gene02506:CDS |
TACAGAAGGGGAGAAAGAAA+GGG | 0.629110 | 3.2:+76001310 | MS.gene02506:CDS |
CTAATCGGGAGAGACCGCCC+TGG | 0.632484 | 3.2:+76000335 | MS.gene02506:CDS |
GATGCACACTTGATACAGAA+GGG | 0.635196 | 3.2:+76001297 | MS.gene02506:CDS |
AGAACCAGAGACACGAGGAT+GGG | 0.635874 | 3.2:+76001757 | MS.gene02506:CDS |
TGTACTTTGCAGGGTCTCCG+TGG | 0.635916 | 3.2:+75998061 | MS.gene02506:intron |
TCTATGTGAGGGATGCATCA+GGG | 0.636872 | 3.2:+76001642 | MS.gene02506:CDS |
ACGTGGTTGTAGCTGAAGTG+TGG | 0.647683 | 3.2:+76000402 | MS.gene02506:CDS |
GATCCGATGAGATTGTGGCA+TGG | 0.649683 | 3.2:-76000820 | None:intergenic |
GATGGAGGATGGTTCATGGA+TGG | 0.659799 | 3.2:+75999135 | MS.gene02506:CDS |
CTACAACCACGTTAAAATGG+AGG | 0.661407 | 3.2:-76000391 | None:intergenic |
TTCATGTCACGGATCAACAA+GGG | 0.666664 | 3.2:+75999981 | MS.gene02506:CDS |
AATTACCATAGAATGTTGTG+AGG | 0.670161 | 3.2:+76000700 | MS.gene02506:CDS |
ATGCACACTTGATACAGAAG+GGG | 0.670406 | 3.2:+76001298 | MS.gene02506:CDS |
ATGGCAACTAGCATTGTCCA+CGG | 0.673612 | 3.2:-75998078 | None:intergenic |
TATTCAAAGAAGAGTAAGCG+AGG | 0.682011 | 3.2:+76001355 | MS.gene02506:CDS |
GTTTCACCCATATTGATAGG+CGG | 0.683397 | 3.2:+76000588 | MS.gene02506:CDS |
TGGAGTAACGACAACAGACA+GGG | 0.688299 | 3.2:+76000652 | MS.gene02506:CDS |
ATATCTCAGACAAGAGACCA+GGG | 0.700312 | 3.2:-76000352 | None:intergenic |
GGATGCATCAGGGAACTCAG+TGG | 0.701774 | 3.2:+76001652 | MS.gene02506:CDS |
GAGCCTAGAGTTGTGTGCAA+AGG | 0.708129 | 3.2:+76001514 | MS.gene02506:CDS |
AGGGCAGGTATATCAACCAG+AGG | 0.716826 | 3.2:+76001599 | MS.gene02506:CDS |
GACAAAGAACCAGAGACACG+AGG | 0.718132 | 3.2:+76001752 | MS.gene02506:CDS |
GGCAGGTATATCAACCAGAG+GGG | 0.745288 | 3.2:+76001601 | MS.gene02506:CDS |
TCTCAGACAAGAGACCAGGG+CGG | 0.828951 | 3.2:-76000349 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | AAATATAAAATACTTTTGTA+AGG | + | chr3.2:75997481-75997500 | MS.gene02506:intron | 10.0% |
!!! | AATTAAAACTGAAAAATTTT+CGG | - | chr3.2:75998541-75998560 | None:intergenic | 10.0% |
!!! | AATTGAATATAATTTGTAAA+AGG | - | chr3.2:75998860-75998879 | None:intergenic | 10.0% |
!!! | ATGTATAAATAAATTTTTCA+AGG | + | chr3.2:76000178-76000197 | MS.gene02506:intron | 10.0% |
!!! | GAAAAAAAAAAAATTTTTGA+AGG | + | chr3.2:75998635-75998654 | MS.gene02506:intron | 10.0% |
!!! | TGTATAAATAAATTTTTCAA+GGG | + | chr3.2:76000179-76000198 | MS.gene02506:intron | 10.0% |
!!! | TTTTTTTTTTTTTTTTGAAC+CGG | + | chr3.2:75999614-75999633 | MS.gene02506:intron | 10.0% |
!! | AAAAAATCGCAAAAAAAATT+TGG | - | chr3.2:75998516-75998535 | None:intergenic | 15.0% |
!! | AAAAATCGCAAAAAAAATTT+GGG | - | chr3.2:75998515-75998534 | None:intergenic | 15.0% |
!! | TATATTCATTTATCAAGATA+TGG | + | chr3.2:76000082-76000101 | MS.gene02506:intron | 15.0% |
!! | TTCATAAAGAATCATTTATT+TGG | + | chr3.2:75998972-75998991 | MS.gene02506:intron | 15.0% |
!!! | AACTGAATTTTTTTTTTTGA+AGG | - | chr3.2:75998488-75998507 | None:intergenic | 15.0% |
!!! | AATTTATTCTTGTAACATTT+TGG | - | chr3.2:76001173-76001192 | None:intergenic | 15.0% |
!!! | ATTAAAACTGAAAAATTTTC+GGG | - | chr3.2:75998540-75998559 | None:intergenic | 15.0% |
!!! | CTTTAAAATTTAACCAAATA+TGG | + | chr3.2:75997377-75997396 | MS.gene02506:intron | 15.0% |
!!! | TATTCAATTTTCAAACTTAT+AGG | + | chr3.2:75998871-75998890 | MS.gene02506:intron | 15.0% |
!!! | TTTTTTTTTTTTTTTGAACC+GGG | + | chr3.2:75999615-75999634 | MS.gene02506:intron | 15.0% |
!! | AAAAAAAAAAAATAAGCCAG+GGG | - | chr3.2:75998456-75998475 | None:intergenic | 20.0% |
!! | AAAAAATAGAAAGAAAGTTG+TGG | + | chr3.2:75999507-75999526 | MS.gene02506:intron | 20.0% |
!! | AAAAGGAATATTACCATATT+TGG | - | chr3.2:75997393-75997412 | None:intergenic | 20.0% |
!! | AATTATGCAATGTAAAAGTA+TGG | + | chr3.2:75999812-75999831 | MS.gene02506:intron | 20.0% |
!! | ACAAAAAAAAAAAATAAGCC+AGG | - | chr3.2:75998458-75998477 | None:intergenic | 20.0% |
!! | ACTTTAACACTCTTTATTAT+TGG | + | chr3.2:75999750-75999769 | MS.gene02506:intron | 20.0% |
!! | AGTCTTAGTATTAAATTCTA+CGG | + | chr3.2:76001473-76001492 | MS.gene02506:intron | 20.0% |
!! | ATACATCAATTTCTCATAAA+TGG | - | chr3.2:75997560-75997579 | None:intergenic | 20.0% |
!! | CAAAAAAAAAAAATAAGCCA+GGG | - | chr3.2:75998457-75998476 | None:intergenic | 20.0% |
!! | CTCTTGACTATTATTAATAA+CGG | - | chr3.2:75999279-75999298 | None:intergenic | 20.0% |
!! | CTTTAACACTCTTTATTATT+GGG | + | chr3.2:75999751-75999770 | MS.gene02506:intron | 20.0% |
!! | GAAATACTGTATATATCAAT+CGG | - | chr3.2:75999964-75999983 | None:intergenic | 20.0% |
!! | GATTCTTTATGAAACAATAA+AGG | - | chr3.2:75998965-75998984 | None:intergenic | 20.0% |
!! | GTAAAAATAGAAAAACTCTA+GGG | - | chr3.2:75998252-75998271 | None:intergenic | 20.0% |
!! | TAAAAATAGAAAAACTCTAG+GGG | - | chr3.2:75998251-75998270 | None:intergenic | 20.0% |
!! | TCAAAAAAGAATATCTCTTA+TGG | + | chr3.2:76000490-76000509 | MS.gene02506:CDS | 20.0% |
!! | TGTAAAAATAGAAAAACTCT+AGG | - | chr3.2:75998253-75998272 | None:intergenic | 20.0% |
!! | TTAAATACTTGTATCAAGTA+GGG | - | chr3.2:75999925-75999944 | None:intergenic | 20.0% |
!!! | AAATAATTTTCAGACAAACA+AGG | - | chr3.2:76001138-76001157 | None:intergenic | 20.0% |
!!! | AATAATTTTCAGACAAACAA+GGG | - | chr3.2:76001137-76001156 | None:intergenic | 20.0% |
!!! | GAATTTTTTCTATAAGATAG+AGG | + | chr3.2:76000968-76000987 | MS.gene02506:intron | 20.0% |
!!! | GAGTTTTTCTATTTTTACAA+AGG | + | chr3.2:75998254-75998273 | MS.gene02506:intron | 20.0% |
!!! | TTAAAACTGAAAAATTTTCG+GGG | - | chr3.2:75998539-75998558 | None:intergenic | 20.0% |
!!! | TTAACAGTTTTTCATACAAT+AGG | + | chr3.2:76000217-76000236 | MS.gene02506:intron | 20.0% |
!!! | TTCCTACTAATTTTGTTTAT+TGG | + | chr3.2:76001110-76001129 | MS.gene02506:intron | 20.0% |
!!! | TTTCTATTTTTTCAAGCTTA+GGG | - | chr3.2:75999499-75999518 | None:intergenic | 20.0% |
! | AAAAAGAATATCTCTTATGG+AGG | + | chr3.2:76000493-76000512 | MS.gene02506:CDS | 25.0% |
! | ATATACAGTATTTCATGTCA+CGG | + | chr3.2:75999970-75999989 | MS.gene02506:intron | 25.0% |
! | ATTAGAAATATGAAGACTTG+AGG | + | chr3.2:76001215-76001234 | MS.gene02506:intron | 25.0% |
! | ATTCTCACTTGGATTAATTT+AGG | + | chr3.2:76001190-76001209 | MS.gene02506:intron | 25.0% |
! | CAAAATATTACTACACAAAG+TGG | + | chr3.2:75997897-75997916 | MS.gene02506:intron | 25.0% |
! | CGATGAGTAATTGAAAAAAA+CGG | + | chr3.2:75999658-75999677 | MS.gene02506:intron | 25.0% |
! | CGTTATTAATAATAGTCAAG+AGG | + | chr3.2:75999277-75999296 | MS.gene02506:intron | 25.0% |
! | CTTAAATACTTGTATCAAGT+AGG | - | chr3.2:75999926-75999945 | None:intergenic | 25.0% |
! | GTCCAATAAACAAAATTAGT+AGG | - | chr3.2:76001115-76001134 | None:intergenic | 25.0% |
! | TACAAGAATAAATTCTCACT+TGG | + | chr3.2:76001179-76001198 | MS.gene02506:intron | 25.0% |
! | TATTAATAATAGTCAAGAGG+TGG | + | chr3.2:75999280-75999299 | MS.gene02506:intron | 25.0% |
! | TGCCTATCATAAAAATGAAA+TGG | + | chr3.2:75999689-75999708 | MS.gene02506:intron | 25.0% |
! | TTAACTGATTAAACTTTGCA+GGG | + | chr3.2:75998756-75998775 | MS.gene02506:intron | 25.0% |
! | TTAACTGATTAAACTTTGCA+GGG | - | chr3.2:75998775-75998756 | None:intergenic | 25.0% |
! | TTAGGAGTAATGTTGTAATA+TGG | + | chr3.2:75999439-75999458 | MS.gene02506:intron | 25.0% |
! | TTGTATGAAAAACTGTTAAC+AGG | - | chr3.2:76000216-76000235 | None:intergenic | 25.0% |
! | TTTAACTGATTAAACTTTGC+AGG | + | chr3.2:75998755-75998774 | MS.gene02506:intron | 25.0% |
! | TTTAACTGATTAAACTTTGC+AGG | - | chr3.2:75998774-75998755 | None:intergenic | 25.0% |
!! | CAACATTCTATGGTAATTTT+CGG | - | chr3.2:76000698-76000717 | None:intergenic | 25.0% |
!! | CACTTTGTGTAGTAATATTT+TGG | - | chr3.2:75997899-75997918 | None:intergenic | 25.0% |
!! | GTATTAAATTCTACGGATTT+TGG | + | chr3.2:76001480-76001499 | MS.gene02506:intron | 25.0% |
!! | TCTTTGTAGCTAATGAATTT+TGG | - | chr3.2:75999189-75999208 | None:intergenic | 25.0% |
!!! | CAACTTGTATTTTAACACTA+AGG | - | chr3.2:75999465-75999484 | None:intergenic | 25.0% |
!!! | CATTATTCTGTTTCTATGTA+AGG | - | chr3.2:76001032-76001051 | None:intergenic | 25.0% |
!!! | CTTTCTATTTTTTCAAGCTT+AGG | - | chr3.2:75999500-75999519 | None:intergenic | 25.0% |
!!! | TAATAAAGAGTGTTAAAGTG+TGG | - | chr3.2:75999749-75999768 | None:intergenic | 25.0% |
!!! | TATTCTTTTTTGATCATCCA+CGG | - | chr3.2:76000483-76000502 | None:intergenic | 25.0% |
!!! | TGCCATTTCATTTTTATGAT+AGG | - | chr3.2:75999694-75999713 | None:intergenic | 25.0% |
AAAAGTTCTTTCACAAATCG+TGG | - | chr3.2:76001420-76001439 | None:intergenic | 30.0% | |
AAACTTCATTTGTACTTTGC+AGG | + | chr3.2:75998051-75998070 | MS.gene02506:intron | 30.0% | |
AAAGCTTACATATCTTCTGA+TGG | + | chr3.2:75999117-75999136 | MS.gene02506:CDS | 30.0% | |
AACCATAGATCTCATTGAAA+AGG | + | chr3.2:76000024-76000043 | MS.gene02506:CDS | 30.0% | |
AACTTCATTTGTACTTTGCA+GGG | + | chr3.2:75998052-75998071 | MS.gene02506:intron | 30.0% | |
AATGAAGTTTACCATCAAAG+AGG | - | chr3.2:75998041-75998060 | None:intergenic | 30.0% | |
AATTACCATAGAATGTTGTG+AGG | + | chr3.2:76000700-76000719 | MS.gene02506:CDS | 30.0% | |
ACAAAGAAGAAGTGAAGAAT+TGG | + | chr3.2:76000261-76000280 | MS.gene02506:CDS | 30.0% | |
ACACAGATATACACAATGTT+TGG | - | chr3.2:75999579-75999598 | None:intergenic | 30.0% | |
ACGTCATCAAATTAACACAA+TGG | + | chr3.2:75998410-75998429 | MS.gene02506:intron | 30.0% | |
AGATTAAGGTTCAAACTCAT+AGG | - | chr3.2:75997779-75997798 | None:intergenic | 30.0% | |
AGATTGTGTTAAAAGGAGAT+CGG | - | chr3.2:75997830-75997849 | None:intergenic | 30.0% | |
AGCTCTGTTAAAAAAAGAGA+AGG | - | chr3.2:75997630-75997649 | None:intergenic | 30.0% | |
AGGAAAAAAAAAATTAGCCC+AGG | + | chr3.2:75998655-75998674 | MS.gene02506:intron | 30.0% | |
AGTCACACATAGTACTTAAA+TGG | + | chr3.2:76000900-76000919 | MS.gene02506:intron | 30.0% | |
ATAGAATGTTGTGAGGAAAA+AGG | + | chr3.2:76000707-76000726 | MS.gene02506:CDS | 30.0% | |
ATCAAATTAACACAATGGCA+TGG | + | chr3.2:75998415-75998434 | MS.gene02506:intron | 30.0% | |
ATCAGAAGATATGTAAGCTT+TGG | - | chr3.2:75999118-75999137 | None:intergenic | 30.0% | |
ATGGAAAAAAGTCATCAAAG+AGG | - | chr3.2:75998153-75998172 | None:intergenic | 30.0% | |
CAAAATTACCATAATGGCAT+GGG | - | chr3.2:75998697-75998716 | None:intergenic | 30.0% | |
CATGATCAGATTGTGTTAAA+AGG | - | chr3.2:75997837-75997856 | None:intergenic | 30.0% | |
CGTCATCAAAATTACCATAA+TGG | - | chr3.2:75998703-75998722 | None:intergenic | 30.0% | |
CTTACATGACACATTCATAT+TGG | - | chr3.2:75999372-75999391 | None:intergenic | 30.0% | |
GAAAAAAAAAATTAGCCCAG+GGG | + | chr3.2:75998657-75998676 | MS.gene02506:intron | 30.0% | |
GATAAGATTAAGGTAAACCT+TGG | - | chr3.2:75997343-75997362 | None:intergenic | 30.0% | |
GCGAAATCAAGATAAGATTA+AGG | - | chr3.2:75997353-75997372 | None:intergenic | 30.0% | |
GCTTCAGTTTCTACTTTAAT+TGG | + | chr3.2:75997983-75998002 | MS.gene02506:intron | 30.0% | |
GGAAAAAAAAAATTAGCCCA+GGG | + | chr3.2:75998656-75998675 | MS.gene02506:intron | 30.0% | |
TAACTGATTAAACTTTGCAG+GGG | + | chr3.2:75998757-75998776 | MS.gene02506:intron | 30.0% | |
TAACTGATTAAACTTTGCAG+GGG | - | chr3.2:75998776-75998757 | None:intergenic | 30.0% | |
TATAAGATAGAGGTCATGAA+AGG | + | chr3.2:76000978-76000997 | MS.gene02506:intron | 30.0% | |
TCAAAATTACCATAATGGCA+TGG | - | chr3.2:75998698-75998717 | None:intergenic | 30.0% | |
TCAAATTAACACAATGGCAT+GGG | + | chr3.2:75998416-75998435 | MS.gene02506:intron | 30.0% | |
TCATACTCAGGATCAAAATA+TGG | - | chr3.2:75997295-75997314 | None:intergenic | 30.0% | |
TCCCATATGAAATTTGAACA+GGG | - | chr3.2:75999218-75999237 | None:intergenic | 30.0% | |
TCTTAATGTCTTCTATGTGA+GGG | + | chr3.2:76001631-76001650 | MS.gene02506:CDS | 30.0% | |
TGTTCAAATTTCATATGGGA+CGG | + | chr3.2:75999218-75999237 | MS.gene02506:intron | 30.0% | |
TTAAATGGTTCAAATGTCGA+GGG | + | chr3.2:76000915-76000934 | MS.gene02506:intron | 30.0% | |
TTGTACCATCATTGACATAA+AGG | - | chr3.2:76000454-76000473 | None:intergenic | 30.0% | |
TTTAACACAATCTGATCATG+AGG | + | chr3.2:75997837-75997856 | MS.gene02506:intron | 30.0% | |
! | AGATACAGCTTTTCTCAATT+TGG | + | chr3.2:76001085-76001104 | MS.gene02506:intron | 30.0% |
! | ATAACTGCCAAAGTTTTCAA+CGG | - | chr3.2:75999315-75999334 | None:intergenic | 30.0% |
! | ATTGGTTTCAGCTAAGATTA+AGG | - | chr3.2:75997793-75997812 | None:intergenic | 30.0% |
! | CAAACTCATCTTAGTTCTTT+CGG | + | chr3.2:75997687-75997706 | MS.gene02506:intron | 30.0% |
! | CAATGTTTGGTAACAAAGTT+CGG | - | chr3.2:75999566-75999585 | None:intergenic | 30.0% |
! | TATGCAATGTAAAAGTATGG+TGG | + | chr3.2:75999815-75999834 | MS.gene02506:intron | 30.0% |
! | TTTTTCATACAATAGGCTCT+AGG | + | chr3.2:76000224-76000243 | MS.gene02506:intron | 30.0% |
! | TTTTTCCTCACAACATTCTA+TGG | - | chr3.2:76000708-76000727 | None:intergenic | 30.0% |
!! | ATTGTGTTAATTTGATGACG+TGG | - | chr3.2:75998411-75998430 | None:intergenic | 30.0% |
!! | TTTGATAGTGTTAACAAACC+TGG | + | chr3.2:75999042-75999061 | MS.gene02506:CDS | 30.0% |
!! | TTTTTCAATTACTCATCGCA+AGG | - | chr3.2:75999656-75999675 | None:intergenic | 30.0% |
!!! | ATTTGATGGTTTTAGGCAAA+AGG | - | chr3.2:75997410-75997429 | None:intergenic | 30.0% |
!!! | TCTTTGATGACTTTTTTCCA+TGG | + | chr3.2:75998152-75998171 | MS.gene02506:intron | 30.0% |
!!! | TTATGGTAATTTTGATGACG+TGG | + | chr3.2:75998703-75998722 | MS.gene02506:intron | 30.0% |
AAGATTAAGGTAAACCTTGG+AGG | - | chr3.2:75997340-75997359 | None:intergenic | 35.0% | |
AATGATGGTAGATGTGAAGA+AGG | + | chr3.2:76001718-76001737 | MS.gene02506:CDS | 35.0% | |
AATGTTGATCGTGTACCTTT+AGG | + | chr3.2:76001250-76001269 | MS.gene02506:intron | 35.0% | |
ACAAGTGGCTACTTAAAAAG+TGG | - | chr3.2:75998929-75998948 | None:intergenic | 35.0% | |
AGAAATCGGTAAGACAATGA+TGG | + | chr3.2:76001703-76001722 | MS.gene02506:CDS | 35.0% | |
AGATTAAGGTAAACCTTGGA+GGG | - | chr3.2:75997339-75997358 | None:intergenic | 35.0% | |
ATATAGCGATTGAGCTAATC+GGG | + | chr3.2:76000321-76000340 | MS.gene02506:CDS | 35.0% | |
ATATGAAGACTTGAGGAATG+TGG | + | chr3.2:76001222-76001241 | MS.gene02506:intron | 35.0% | |
ATCAATATGGGTGAAACTCA+TGG | - | chr3.2:76000585-76000604 | None:intergenic | 35.0% | |
ATGGTAACCGTTGAAAACTT+TGG | + | chr3.2:75999305-75999324 | MS.gene02506:intron | 35.0% | |
CACACAATCACACACATTTA+TGG | + | chr3.2:75999880-75999899 | MS.gene02506:intron | 35.0% | |
CATATAGCGATTGAGCTAAT+CGG | + | chr3.2:76000320-76000339 | MS.gene02506:CDS | 35.0% | |
CCATAACTGTACACTAATCA+AGG | + | chr3.2:75998097-75998116 | MS.gene02506:CDS | 35.0% | |
CCTTGATTAGTGTACAGTTA+TGG | - | chr3.2:75998100-75998119 | None:intergenic | 35.0% | |
CTCTTAATGTCTTCTATGTG+AGG | + | chr3.2:76001630-76001649 | MS.gene02506:CDS | 35.0% | |
CTTAAATGGTTCAAATGTCG+AGG | + | chr3.2:76000914-76000933 | MS.gene02506:intron | 35.0% | |
GATCGGGATTATGAAAGTTA+TGG | + | chr3.2:76000632-76000651 | MS.gene02506:CDS | 35.0% | |
GCATAAACGTGTGAATTTGA+TGG | - | chr3.2:75997424-75997443 | None:intergenic | 35.0% | |
GCCCTGTTCAAATTTCATAT+GGG | + | chr3.2:75999214-75999233 | MS.gene02506:intron | 35.0% | |
GGAGGATTTGTGTATTCAAA+TGG | + | chr3.2:76001006-76001025 | MS.gene02506:intron | 35.0% | |
GTAGAAACTGAAGCTGAATA+AGG | - | chr3.2:75997977-75997996 | None:intergenic | 35.0% | |
GTCCCATATGAAATTTGAAC+AGG | - | chr3.2:75999219-75999238 | None:intergenic | 35.0% | |
GTTCAAATTTCATATGGGAC+GGG | + | chr3.2:75999219-75999238 | MS.gene02506:intron | 35.0% | |
TAAAAAGTGGTACTCACAGA+GGG | - | chr3.2:75998916-75998935 | None:intergenic | 35.0% | |
TAACAAACCTGGAATTCTAC+TGG | + | chr3.2:75999053-75999072 | MS.gene02506:CDS | 35.0% | |
TAATAGTCAAGAGGTGGTAA+TGG | + | chr3.2:75999286-75999305 | MS.gene02506:intron | 35.0% | |
TATGAGTCATACTCACTGAT+AGG | - | chr3.2:75999407-75999426 | None:intergenic | 35.0% | |
TATTCAAAGAAGAGTAAGCG+AGG | + | chr3.2:76001355-76001374 | MS.gene02506:CDS | 35.0% | |
TCTTCACTTCTTCTTTGTTC+TGG | - | chr3.2:76000259-76000278 | None:intergenic | 35.0% | |
TGAGTTTCACCCATATTGAT+AGG | + | chr3.2:76000585-76000604 | MS.gene02506:CDS | 35.0% | |
TGCCCTGTTCAAATTTCATA+TGG | + | chr3.2:75999213-75999232 | MS.gene02506:intron | 35.0% | |
TGGAAGACTCAAATTCATTG+CGG | + | chr3.2:76000124-76000143 | MS.gene02506:intron | 35.0% | |
TGTGTCCTTTATGTCAATGA+TGG | + | chr3.2:76000446-76000465 | MS.gene02506:CDS | 35.0% | |
TTAAAAAGTGGTACTCACAG+AGG | - | chr3.2:75998917-75998936 | None:intergenic | 35.0% | |
TTGCTGAAATTCTCATACTC+AGG | - | chr3.2:75997307-75997326 | None:intergenic | 35.0% | |
TTGTGAGGAAAAAGGATACT+CGG | + | chr3.2:76000715-76000734 | MS.gene02506:CDS | 35.0% | |
! | AAAAAAGGATTAGCGATTGC+AGG | + | chr3.2:75998784-75998803 | MS.gene02506:intron | 35.0% |
! | AAAAAAGGATTAGCGATTGC+AGG | - | chr3.2:75998803-75998784 | None:intergenic | 35.0% |
! | AAAAAGGATTAGCGATTGCA+GGG | + | chr3.2:75998785-75998804 | MS.gene02506:intron | 35.0% |
! | AAAAAGGATTAGCGATTGCA+GGG | - | chr3.2:75998804-75998785 | None:intergenic | 35.0% |
! | ACAAGAATTCTGAGAGAGAA+TGG | + | chr3.2:76001563-76001582 | MS.gene02506:CDS | 35.0% |
! | ACCAAATGTTGTTTGCTGAT+CGG | + | chr3.2:76000615-76000634 | MS.gene02506:CDS | 35.0% |
! | AGAGTGTTAAAGTGTGGTAT+TGG | - | chr3.2:75999743-75999762 | None:intergenic | 35.0% |
! | ATCAGCTACTTTAGAAGTCT+AGG | + | chr3.2:75998200-75998219 | MS.gene02506:intron | 35.0% |
! | ATTCTATGGTAATTTTCGGC+CGG | - | chr3.2:76000694-76000713 | None:intergenic | 35.0% |
! | CACCTTTTCAATGAGATCTA+TGG | - | chr3.2:76000029-76000048 | None:intergenic | 35.0% |
! | CAGCTCAATAACATTTTACG+TGG | + | chr3.2:76000518-76000537 | MS.gene02506:CDS | 35.0% |
! | CTTCTTCTTTGGTAACTTGT+TGG | + | chr3.2:76001790-76001809 | MS.gene02506:CDS | 35.0% |
! | CTTTGGTGATTATGAAGTCA+AGG | - | chr3.2:75999101-75999120 | None:intergenic | 35.0% |
! | GAAGCACTTCGTAAAGAAAT+CGG | + | chr3.2:76001689-76001708 | MS.gene02506:CDS | 35.0% |
! | GCTAAAACTAGCTTCTTCTT+TGG | + | chr3.2:76001779-76001798 | MS.gene02506:CDS | 35.0% |
! | TAACATTTTACGTGGATGTG+AGG | + | chr3.2:76000526-76000545 | MS.gene02506:CDS | 35.0% |
!! | AAAAGAAGTGTCCTCTTTGA+TGG | + | chr3.2:75998027-75998046 | MS.gene02506:intron | 35.0% |
!! | CGTGTGAATTTGATGGTTTT+AGG | - | chr3.2:75997417-75997436 | None:intergenic | 35.0% |
!! | GTTTTAGACGAAAAAGGAAG+AGG | + | chr3.2:75999717-75999736 | MS.gene02506:intron | 35.0% |
!! | TAACTTGTTGGAAAGGTTCT+TGG | + | chr3.2:76001802-76001821 | MS.gene02506:CDS | 35.0% |
!! | TAGACTTCTAAAGTAGCTGA+TGG | - | chr3.2:75998201-75998220 | None:intergenic | 35.0% |
!! | TCTGGTTCTTTGTCATATGT+TGG | - | chr3.2:76001746-76001765 | None:intergenic | 35.0% |
!! | TCTTTGGTAACTTGTTGGAA+AGG | + | chr3.2:76001795-76001814 | MS.gene02506:CDS | 35.0% |
!!! | GCATGAGTTTTAGACGAAAA+AGG | + | chr3.2:75999711-75999730 | MS.gene02506:intron | 35.0% |
!!! | TCTTCTTTGTTCTGGCTTTT+TGG | - | chr3.2:76000251-76000270 | None:intergenic | 35.0% |
AAATTTCATATGGGACGGGA+CGG | + | chr3.2:75999223-75999242 | MS.gene02506:intron | 40.0% | |
ACATATCTTCTGATGGAGGA+TGG | + | chr3.2:75999124-75999143 | MS.gene02506:CDS | 40.0% | |
AGAATGGCCTAACAGTTTGT+AGG | + | chr3.2:76001579-76001598 | MS.gene02506:CDS | 40.0% | |
AGGTATTAAAACAGCACTCC+CGG | - | chr3.2:75999636-75999655 | None:intergenic | 40.0% | |
ATACAGAAGGGGAGAAAGAA+AGG | + | chr3.2:76001309-76001328 | MS.gene02506:CDS | 40.0% | |
ATATCTCAGACAAGAGACCA+GGG | - | chr3.2:76000355-76000374 | None:intergenic | 40.0% | |
ATGAATTTGAGTCTTCCACG+TGG | - | chr3.2:76000122-76000141 | None:intergenic | 40.0% | |
ATGCACACTTGATACAGAAG+GGG | + | chr3.2:76001298-76001317 | MS.gene02506:CDS | 40.0% | |
ATGGAGAGAAAGTTGCTAGT+AGG | + | chr3.2:76000549-76000568 | MS.gene02506:CDS | 40.0% | |
CAGCTACAACCACGTTAAAA+TGG | - | chr3.2:76000397-76000416 | None:intergenic | 40.0% | |
CCAAACCACAACTCATATAG+AGG | - | chr3.2:75998178-75998197 | None:intergenic | 40.0% | |
CCTCTATATGAGTTGTGGTT+TGG | + | chr3.2:75998175-75998194 | MS.gene02506:intron | 40.0% | |
CTACAACCACGTTAAAATGG+AGG | - | chr3.2:76000394-76000413 | None:intergenic | 40.0% | |
CTCATAGTGCAGTACAGTTT+AGG | + | chr3.2:75999421-75999440 | MS.gene02506:intron | 40.0% | |
CTTTGCAGGGGCAAAAAAAA+AGG | + | chr3.2:75998769-75998788 | MS.gene02506:intron | 40.0% | |
CTTTGCAGGGGCAAAAAAAA+AGG | - | chr3.2:75998788-75998769 | None:intergenic | 40.0% | |
GAAGAAGTGAAGAATTGGTC+AGG | + | chr3.2:76000266-76000285 | MS.gene02506:CDS | 40.0% | |
GAAGAATTGGTCAGGCAAAT+GGG | + | chr3.2:76000274-76000293 | MS.gene02506:CDS | 40.0% | |
GAATGGCCTAACAGTTTGTA+GGG | + | chr3.2:76001580-76001599 | MS.gene02506:CDS | 40.0% | |
GAATTGACGAAAATACCCCT+GGG | - | chr3.2:75998457-75998438 | None:intergenic | 40.0% | |
GAGTGAGACACTACATATGT+TGG | - | chr3.2:75997510-75997529 | None:intergenic | 40.0% | |
GATCAGCAAACAACATTTGG+TGG | - | chr3.2:76000616-76000635 | None:intergenic | 40.0% | |
GATGCACACTTGATACAGAA+GGG | + | chr3.2:76001297-76001316 | MS.gene02506:CDS | 40.0% | |
GCTTACATATCTTCTGATGG+AGG | + | chr3.2:75999120-75999139 | MS.gene02506:CDS | 40.0% | |
GTGACTGATAAGTGAACATG+CGG | - | chr3.2:76000886-76000905 | None:intergenic | 40.0% | |
GTTAAAAGGAGATCGGAGTT+GGG | - | chr3.2:75997823-75997842 | None:intergenic | 40.0% | |
GTTATTCGTCCCTGCAAATA+GGG | + | chr3.2:75998286-75998305 | MS.gene02506:intron | 40.0% | |
GTTATTCGTCCCTGCAAATA+GGG | - | chr3.2:75998305-75998286 | None:intergenic | 40.0% | |
GTTTCACCCATATTGATAGG+CGG | + | chr3.2:76000588-76000607 | MS.gene02506:CDS | 40.0% | |
GTTTCTATCTAACTACCACG+TGG | + | chr3.2:76000104-76000123 | MS.gene02506:intron | 40.0% | |
TACAGAAGGGGAGAAAGAAA+GGG | + | chr3.2:76001310-76001329 | MS.gene02506:CDS | 40.0% | |
TACTTTATTCGGCACATGGA+CGG | + | chr3.2:76001275-76001294 | MS.gene02506:CDS | 40.0% | |
TATCCTTTGCACACAACTCT+AGG | - | chr3.2:76001520-76001539 | None:intergenic | 40.0% | |
TGAAGAATTGGTCAGGCAAA+TGG | + | chr3.2:76000273-76000292 | MS.gene02506:CDS | 40.0% | |
TGTGTTTGAAAAGAGAGAGC+AGG | - | chr3.2:75999864-75999883 | None:intergenic | 40.0% | |
TGTTAAAAGGAGATCGGAGT+TGG | - | chr3.2:75997824-75997843 | None:intergenic | 40.0% | |
TGTTATTCGTCCCTGCAAAT+AGG | + | chr3.2:75998285-75998304 | MS.gene02506:intron | 40.0% | |
TGTTATTCGTCCCTGCAAAT+AGG | - | chr3.2:75998304-75998285 | None:intergenic | 40.0% | |
TTAAACGACCCCTATTTGCA+GGG | - | chr3.2:75998298-75998317 | None:intergenic | 40.0% | |
TTATTCGTCCCTGCAAATAG+GGG | + | chr3.2:75998287-75998306 | MS.gene02506:intron | 40.0% | |
TTATTCGTCCCTGCAAATAG+GGG | - | chr3.2:75998306-75998287 | None:intergenic | 40.0% | |
TTCATGTCACGGATCAACAA+GGG | + | chr3.2:75999981-76000000 | MS.gene02506:CDS | 40.0% | |
TTGGGTGAATGAATCAGTCT+AGG | + | chr3.2:75999769-75999788 | MS.gene02506:intron | 40.0% | |
TTGTGTGCAAAGGATAGAGT+GGG | + | chr3.2:76001524-76001543 | MS.gene02506:CDS | 40.0% | |
TTTAAACGACCCCTATTTGC+AGG | - | chr3.2:75998299-75998318 | None:intergenic | 40.0% | |
TTTCATGTCACGGATCAACA+AGG | + | chr3.2:75999980-75999999 | MS.gene02506:CDS | 40.0% | |
! | ATTCTACGGATTTTGGACAC+AGG | + | chr3.2:76001487-76001506 | MS.gene02506:intron | 40.0% |
! | ATTTTACGTGGATGTGAGGA+TGG | + | chr3.2:76000530-76000549 | MS.gene02506:CDS | 40.0% |
! | CCAAATGTTGTTTGCTGATC+GGG | + | chr3.2:76000616-76000635 | MS.gene02506:CDS | 40.0% |
! | GCAGTCATTAACTTGGTCAA+GGG | + | chr3.2:75998725-75998744 | MS.gene02506:intron | 40.0% |
! | TTCTACGGATTTTGGACACA+GGG | + | chr3.2:76001488-76001507 | MS.gene02506:intron | 40.0% |
AACCACGTTAAAATGGAGGC+TGG | - | chr3.2:76000390-76000409 | None:intergenic | 45.0% | |
AATTGGTCAGGCAAATGGGT+TGG | + | chr3.2:76000278-76000297 | MS.gene02506:CDS | 45.0% | |
ACCACTTCCAGTAGAATTCC+AGG | - | chr3.2:75999063-75999082 | None:intergenic | 45.0% | |
ACCTGGAATTCTACTGGAAG+TGG | + | chr3.2:75999059-75999078 | MS.gene02506:CDS | 45.0% | |
ATCCGATGAGATTGTGGCAT+GGG | - | chr3.2:76000822-76000841 | None:intergenic | 45.0% | |
ATGGAGTAACGACAACAGAC+AGG | + | chr3.2:76000651-76000670 | MS.gene02506:CDS | 45.0% | |
ATGGCAACTAGCATTGTCCA+CGG | - | chr3.2:75998081-75998100 | None:intergenic | 45.0% | |
CACAACTCATATAGAGGCCA+TGG | - | chr3.2:75998172-75998191 | None:intergenic | 45.0% | |
CATGGCCTCTATATGAGTTG+TGG | + | chr3.2:75998170-75998189 | MS.gene02506:intron | 45.0% | |
CCCGATCAGCAAACAACATT+TGG | - | chr3.2:76000619-76000638 | None:intergenic | 45.0% | |
CGTCAATTCCCATGCCATTA+TGG | + | chr3.2:75998686-75998705 | MS.gene02506:intron | 45.0% | |
CTGAAGTGTGGACTCATAAC+AGG | + | chr3.2:76000414-76000433 | MS.gene02506:CDS | 45.0% | |
GATATCTCAGACAAGAGACC+AGG | - | chr3.2:76000356-76000375 | None:intergenic | 45.0% | |
GATGTACCTGCGATGCATAA+GGG | - | chr3.2:76000847-76000866 | None:intergenic | 45.0% | |
GCAACAAAATCAACCCTCCA+AGG | + | chr3.2:75997323-75997342 | MS.gene02506:CDS | 45.0% | |
GGAATTGACGAAAATACCCC+TGG | + | chr3.2:75998437-75998456 | MS.gene02506:intron | 45.0% | |
GGAATTGACGAAAATACCCC+TGG | - | chr3.2:75998456-75998437 | None:intergenic | 45.0% | |
GGAGCAATGTGACAAACAAG+TGG | - | chr3.2:75998944-75998963 | None:intergenic | 45.0% | |
GGATGCACACTTGATACAGA+AGG | + | chr3.2:76001296-76001315 | MS.gene02506:CDS | 45.0% | |
GGTGAAACTCATGGACAAAC+TGG | - | chr3.2:76000576-76000595 | None:intergenic | 45.0% | |
GTTGTGTGCAAAGGATAGAG+TGG | + | chr3.2:76001523-76001542 | MS.gene02506:CDS | 45.0% | |
TACCTGCCCTACAAACTGTT+AGG | - | chr3.2:76001589-76001608 | None:intergenic | 45.0% | |
TAGAGGTCATGAAAGGCTTG+TGG | + | chr3.2:76000985-76001004 | MS.gene02506:intron | 45.0% | |
TCGGAGTTGGGTAGGTAAAT+TGG | - | chr3.2:75997811-75997830 | None:intergenic | 45.0% | |
TCTATGTGAGGGATGCATCA+GGG | + | chr3.2:76001642-76001661 | MS.gene02506:CDS | 45.0% | |
TGACGTGGCAGTCATTAACT+TGG | + | chr3.2:75998718-75998737 | MS.gene02506:intron | 45.0% | |
TGACGTGGCAGTCATTAACT+TGG | - | chr3.2:75998737-75998718 | None:intergenic | 45.0% | |
TGAGGAAAAAGGATACTCGG+TGG | + | chr3.2:76000718-76000737 | MS.gene02506:CDS | 45.0% | |
TGATGTACCTGCGATGCATA+AGG | - | chr3.2:76000848-76000867 | None:intergenic | 45.0% | |
TGGAGTAACGACAACAGACA+GGG | + | chr3.2:76000652-76000671 | MS.gene02506:CDS | 45.0% | |
TTAAGCGACCCCTATTTGCA+GGG | + | chr3.2:75998816-75998835 | MS.gene02506:intron | 45.0% | |
TTCCCATGCCACAATCTCAT+CGG | + | chr3.2:76000817-76000836 | MS.gene02506:CDS | 45.0% | |
TTCTATGTGAGGGATGCATC+AGG | + | chr3.2:76001641-76001660 | MS.gene02506:CDS | 45.0% | |
TTCTGATGGAGGATGGTTCA+TGG | + | chr3.2:75999131-75999150 | MS.gene02506:CDS | 45.0% | |
TTTAAGCGACCCCTATTTGC+AGG | + | chr3.2:75998815-75998834 | MS.gene02506:intron | 45.0% | |
! | ATTAAGAGCTTGTTCCCCTC+TGG | - | chr3.2:76001618-76001637 | None:intergenic | 45.0% |
! | ATTGGTCAGGCAAATGGGTT+GGG | + | chr3.2:76000279-76000298 | MS.gene02506:CDS | 45.0% |
! | GGCAGTCATTAACTTGGTCA+AGG | + | chr3.2:75998724-75998743 | MS.gene02506:intron | 45.0% |
! | GTAATTTTCGGCCGGAAAGA+GGG | - | chr3.2:76000686-76000705 | None:intergenic | 45.0% |
!! | TTAAAAGTAAAAAAAAAATT+CGG | - | chr3.2:75998578-75998597 | None:intergenic | 5.0% |
!! | TTAAAATTAAAATGTTTAAT+TGG | + | chr3.2:75997941-75997960 | MS.gene02506:intron | 5.0% |
!!! | TTTATTTTATTTTTGAAATA+CGG | + | chr3.2:75997656-75997675 | MS.gene02506:intron | 5.0% |
AAAGGAGATCGGAGTTGGGT+AGG | - | chr3.2:75997819-75997838 | None:intergenic | 50.0% | |
AAGAACCAGAGACACGAGGA+TGG | + | chr3.2:76001756-76001775 | MS.gene02506:CDS | 50.0% | |
ACGTGGTTGTAGCTGAAGTG+TGG | + | chr3.2:76000402-76000421 | MS.gene02506:CDS | 50.0% | |
AGAACCAGAGACACGAGGAT+GGG | + | chr3.2:76001757-76001776 | MS.gene02506:CDS | 50.0% | |
AGGGCAGGTATATCAACCAG+AGG | + | chr3.2:76001599-76001618 | MS.gene02506:CDS | 50.0% | |
AGGTCATGAAAGGCTTGTGG+AGG | + | chr3.2:76000988-76001007 | MS.gene02506:intron | 50.0% | |
CGTTAAAATGGAGGCTGGCA+AGG | - | chr3.2:76000385-76000404 | None:intergenic | 50.0% | |
GACAAAGAACCAGAGACACG+AGG | + | chr3.2:76001752-76001771 | MS.gene02506:CDS | 50.0% | |
GAGCCTAGAGTTGTGTGCAA+AGG | + | chr3.2:76001514-76001533 | MS.gene02506:CDS | 50.0% | |
GATCCGATGAGATTGTGGCA+TGG | - | chr3.2:76000823-76000842 | None:intergenic | 50.0% | |
GATGGAGGATGGTTCATGGA+TGG | + | chr3.2:75999135-75999154 | MS.gene02506:CDS | 50.0% | |
GGCAGGTATATCAACCAGAG+GGG | + | chr3.2:76001601-76001620 | MS.gene02506:CDS | 50.0% | |
GGGCAGGTATATCAACCAGA+GGG | + | chr3.2:76001600-76001619 | MS.gene02506:CDS | 50.0% | |
GTGGAGCCGCCTATCAATAT+GGG | - | chr3.2:76000597-76000616 | None:intergenic | 50.0% | |
TGACCACATCTCCGACTACA+GGG | - | chr3.2:75999536-75999555 | None:intergenic | 50.0% | |
TGATGGTACAAGACAAGCCG+TGG | + | chr3.2:76000463-76000482 | MS.gene02506:CDS | 50.0% | |
! | GGTAATTTTCGGCCGGAAAG+AGG | - | chr3.2:76000687-76000706 | None:intergenic | 50.0% |
!! | TGCCAGCCTCCATTTTAACG+TGG | + | chr3.2:76000385-76000404 | MS.gene02506:CDS | 50.0% |
!! | TTGGTCAGGCAAATGGGTTG+GGG | + | chr3.2:76000280-76000299 | MS.gene02506:CDS | 50.0% |
AGGGCGATCCGATGAGATTG+TGG | - | chr3.2:76000828-76000847 | None:intergenic | 55.0% | |
AGTTGTGGCCACCCTGTAGT+CGG | + | chr3.2:75999522-75999541 | MS.gene02506:intron | 55.0% | |
GGATGCATCAGGGAACTCAG+TGG | + | chr3.2:76001652-76001671 | MS.gene02506:CDS | 55.0% | |
GGCCTAACAGTTTGTAGGGC+AGG | + | chr3.2:76001584-76001603 | MS.gene02506:CDS | 55.0% | |
GGGAATGTCCTCCCTCTTTC+CGG | + | chr3.2:76000672-76000691 | MS.gene02506:CDS | 55.0% | |
GGGACGGGACGGTTGTAAAA+TGG | + | chr3.2:75999234-75999253 | MS.gene02506:intron | 55.0% | |
GGTGGAGCCGCCTATCAATA+TGG | - | chr3.2:76000598-76000617 | None:intergenic | 55.0% | |
GTGACCACATCTCCGACTAC+AGG | - | chr3.2:75999537-75999556 | None:intergenic | 55.0% | |
TCTCAGACAAGAGACCAGGG+CGG | - | chr3.2:76000352-76000371 | None:intergenic | 55.0% | |
TGGTACTCACAGAGGGCTAG+TGG | - | chr3.2:75998909-75998928 | None:intergenic | 55.0% | |
TGTACTTTGCAGGGTCTCCG+TGG | + | chr3.2:75998061-75998080 | MS.gene02506:intron | 55.0% | |
TTAGCCCATCCTCGTGTCTC+TGG | - | chr3.2:76001764-76001783 | None:intergenic | 55.0% | |
! | ATTTTCGGCCGGAAAGAGGG+AGG | - | chr3.2:76000683-76000702 | None:intergenic | 55.0% |
! | TGGGTTGGGGTGCATTCTGT+TGG | + | chr3.2:76000293-76000312 | MS.gene02506:CDS | 55.0% |
CCACATCTCCGACTACAGGG+TGG | - | chr3.2:75999533-75999552 | None:intergenic | 60.0% | |
CCACCCTGTAGTCGGAGATG+TGG | + | chr3.2:75999530-75999549 | MS.gene02506:intron | 60.0% | |
GGATCGCCCTTATGCATCGC+AGG | + | chr3.2:76000838-76000857 | MS.gene02506:CDS | 60.0% | |
CTAATCGGGAGAGACCGCCC+TGG | + | chr3.2:76000335-76000354 | MS.gene02506:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3.2 | gene | 75997274 | 76001829 | 75997274 | ID=MS.gene02506 |
chr3.2 | mRNA | 75997274 | 76001829 | 75997274 | ID=MS.gene02506.t1;Parent=MS.gene02506 |
chr3.2 | exon | 75997274 | 75997344 | 75997274 | ID=MS.gene02506.t1.exon1;Parent=MS.gene02506.t1 |
chr3.2 | CDS | 75997274 | 75997344 | 75997274 | ID=cds.MS.gene02506.t1;Parent=MS.gene02506.t1 |
chr3.2 | exon | 75998073 | 75998118 | 75998073 | ID=MS.gene02506.t1.exon2;Parent=MS.gene02506.t1 |
chr3.2 | CDS | 75998073 | 75998118 | 75998073 | ID=cds.MS.gene02506.t1;Parent=MS.gene02506.t1 |
chr3.2 | exon | 75999042 | 75999156 | 75999042 | ID=MS.gene02506.t1.exon3;Parent=MS.gene02506.t1 |
chr3.2 | CDS | 75999042 | 75999156 | 75999042 | ID=cds.MS.gene02506.t1;Parent=MS.gene02506.t1 |
chr3.2 | exon | 75999978 | 76000045 | 75999978 | ID=MS.gene02506.t1.exon4;Parent=MS.gene02506.t1 |
chr3.2 | CDS | 75999978 | 76000045 | 75999978 | ID=cds.MS.gene02506.t1;Parent=MS.gene02506.t1 |
chr3.2 | exon | 76000239 | 76000859 | 76000239 | ID=MS.gene02506.t1.exon5;Parent=MS.gene02506.t1 |
chr3.2 | CDS | 76000239 | 76000859 | 76000239 | ID=cds.MS.gene02506.t1;Parent=MS.gene02506.t1 |
chr3.2 | exon | 76001272 | 76001376 | 76001272 | ID=MS.gene02506.t1.exon6;Parent=MS.gene02506.t1 |
chr3.2 | CDS | 76001272 | 76001376 | 76001272 | ID=cds.MS.gene02506.t1;Parent=MS.gene02506.t1 |
chr3.2 | exon | 76001509 | 76001829 | 76001509 | ID=MS.gene02506.t1.exon7;Parent=MS.gene02506.t1 |
chr3.2 | CDS | 76001509 | 76001829 | 76001509 | ID=cds.MS.gene02506.t1;Parent=MS.gene02506.t1 |
Gene Sequence |
Protein sequence |