Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene51452.t1 | XP_013468658.1 | 97.3 | 768 | 12 | 1 | 1 | 768 | 1 | 759 | 0.00E+00 | 1427.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene51452.t1 | Q0WPQ2 | 57.5 | 791 | 291 | 13 | 1 | 767 | 1 | 770 | 3.1e-232 | 806.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene51452.t1 | A0A072VX71 | 97.3 | 768 | 12 | 1 | 1 | 768 | 1 | 759 | 0.0e+00 | 1427.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene51452.t1 | TR | Others |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050937 | MS.gene51452 | 0.814236 | 1.71E-51 | -1.69E-46 |
| MS.gene052015 | MS.gene51452 | 0.821064 | 4.92E-53 | -1.69E-46 |
| MS.gene052503 | MS.gene51452 | -0.80065 | 1.30E-48 | -1.69E-46 |
| MS.gene052823 | MS.gene51452 | -0.802541 | 5.34E-49 | -1.69E-46 |
| MS.gene052825 | MS.gene51452 | -0.813663 | 2.28E-51 | -1.69E-46 |
| MS.gene053203 | MS.gene51452 | -0.811736 | 6.03E-51 | -1.69E-46 |
| MS.gene053421 | MS.gene51452 | 0.890667 | 8.01E-74 | -1.69E-46 |
| MS.gene056550 | MS.gene51452 | 0.805593 | 1.24E-49 | -1.69E-46 |
| MS.gene056647 | MS.gene51452 | 0.809578 | 1.77E-50 | -1.69E-46 |
| MS.gene057173 | MS.gene51452 | 0.817498 | 3.20E-52 | -1.69E-46 |
| MS.gene058127 | MS.gene51452 | 0.830166 | 3.42E-55 | -1.69E-46 |
| MS.gene058544 | MS.gene51452 | -0.804396 | 2.20E-49 | -1.69E-46 |
| MS.gene059480 | MS.gene51452 | 0.801755 | 7.75E-49 | -1.69E-46 |
| MS.gene059971 | MS.gene51452 | 0.808788 | 2.61E-50 | -1.69E-46 |
| MS.gene061226 | MS.gene51452 | 0.853682 | 2.03E-61 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene51452 | MS.gene74902 | PPI |
| MS.gene005060 | MS.gene51452 | PPI |
| MS.gene51452 | MS.gene22870 | PPI |
| MS.gene058783 | MS.gene51452 | PPI |
| MS.gene74904 | MS.gene51452 | PPI |
| MS.gene51452 | MS.gene024512 | PPI |
| MS.gene07610 | MS.gene51452 | PPI |
| MS.gene005062 | MS.gene51452 | PPI |
| MS.gene050576 | MS.gene51452 | PPI |
| MS.gene51452 | MS.gene025978 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene51452.t1 | MTR_1g073840 | 97.396 | 768 | 11 | 1 | 1 | 768 | 1 | 759 | 0.0 | 1536 |
| MS.gene51452.t1 | MTR_1g044210 | 70.535 | 767 | 212 | 6 | 1 | 763 | 1 | 757 | 0.0 | 1064 |
| MS.gene51452.t1 | MTR_7g116330 | 57.333 | 750 | 298 | 8 | 23 | 766 | 28 | 761 | 0.0 | 880 |
| MS.gene51452.t1 | MTR_1g079790 | 56.275 | 757 | 306 | 9 | 19 | 766 | 18 | 758 | 0.0 | 837 |
| MS.gene51452.t1 | MTR_1g079790 | 58.566 | 572 | 225 | 7 | 19 | 581 | 18 | 586 | 0.0 | 653 |
| MS.gene51452.t1 | MTR_4g031150 | 41.467 | 750 | 397 | 18 | 29 | 759 | 54 | 780 | 1.97e-175 | 523 |
| MS.gene51452.t1 | MTR_7g109150 | 40.729 | 631 | 349 | 13 | 29 | 645 | 5 | 624 | 1.48e-129 | 400 |
| MS.gene51452.t1 | MTR_4g134880 | 86.667 | 75 | 9 | 1 | 695 | 768 | 1 | 75 | 2.85e-35 | 128 |
| MS.gene51452.t1 | MTR_5g022470 | 25.369 | 339 | 209 | 8 | 355 | 665 | 499 | 821 | 1.90e-14 | 78.2 |
| MS.gene51452.t1 | MTR_5g022470 | 25.369 | 339 | 209 | 8 | 355 | 665 | 499 | 821 | 1.94e-14 | 78.2 |
| MS.gene51452.t1 | MTR_8g080770 | 29.577 | 142 | 82 | 3 | 631 | 764 | 728 | 859 | 8.46e-14 | 75.9 |
| MS.gene51452.t1 | MTR_8g080770 | 22.938 | 388 | 241 | 10 | 344 | 686 | 262 | 636 | 9.49e-13 | 72.4 |
| MS.gene51452.t1 | MTR_8g080770 | 29.577 | 142 | 82 | 3 | 631 | 764 | 837 | 968 | 1.03e-13 | 75.5 |
| MS.gene51452.t1 | MTR_8g080770 | 23.018 | 391 | 245 | 10 | 344 | 690 | 371 | 749 | 6.78e-13 | 73.2 |
| MS.gene51452.t1 | MTR_8g075340 | 22.687 | 335 | 224 | 8 | 355 | 665 | 461 | 784 | 2.30e-13 | 74.7 |
| MS.gene51452.t1 | MTR_5g097410 | 21.538 | 455 | 298 | 11 | 344 | 750 | 596 | 1039 | 3.33e-13 | 73.9 |
| MS.gene51452.t1 | MTR_3g085130 | 28.571 | 140 | 83 | 3 | 631 | 763 | 692 | 821 | 5.64e-13 | 73.2 |
| MS.gene51452.t1 | MTR_3g085130 | 26.174 | 149 | 110 | 0 | 344 | 492 | 216 | 364 | 3.82e-12 | 70.5 |
| MS.gene51452.t1 | MTR_3g085130 | 28.571 | 140 | 83 | 3 | 631 | 763 | 902 | 1031 | 6.56e-13 | 73.2 |
| MS.gene51452.t1 | MTR_3g085130 | 26.174 | 149 | 110 | 0 | 344 | 492 | 426 | 574 | 2.34e-12 | 71.2 |
| MS.gene51452.t1 | MTR_8g106150 | 23.678 | 397 | 234 | 9 | 344 | 680 | 362 | 749 | 1.67e-11 | 68.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene51452.t1 | AT3G23150 | 59.720 | 787 | 280 | 14 | 1 | 767 | 1 | 770 | 0.0 | 885 |
| MS.gene51452.t1 | AT3G04580 | 57.351 | 755 | 294 | 13 | 23 | 763 | 21 | 761 | 0.0 | 822 |
| MS.gene51452.t1 | AT3G04580 | 57.351 | 755 | 294 | 13 | 23 | 763 | 21 | 761 | 0.0 | 822 |
| MS.gene51452.t1 | AT3G23150 | 61.937 | 599 | 202 | 10 | 1 | 582 | 1 | 590 | 0.0 | 692 |
| MS.gene51452.t1 | AT1G04310 | 53.859 | 622 | 255 | 10 | 9 | 612 | 16 | 623 | 0.0 | 595 |
| MS.gene51452.t1 | AT1G04310 | 53.859 | 622 | 255 | 10 | 9 | 612 | 16 | 623 | 0.0 | 595 |
| MS.gene51452.t1 | AT1G66340 | 39.221 | 770 | 400 | 18 | 29 | 766 | 4 | 737 | 4.89e-169 | 505 |
| MS.gene51452.t1 | AT2G40940 | 40.981 | 571 | 321 | 10 | 29 | 589 | 4 | 568 | 4.90e-125 | 387 |
| MS.gene51452.t1 | AT5G35750 | 25.266 | 376 | 221 | 11 | 332 | 666 | 565 | 921 | 2.34e-18 | 90.9 |
| MS.gene51452.t1 | AT5G35750 | 28.571 | 161 | 83 | 3 | 624 | 763 | 1024 | 1173 | 7.27e-12 | 69.7 |
| MS.gene51452.t1 | AT1G27320 | 21.837 | 490 | 304 | 12 | 325 | 766 | 410 | 868 | 3.16e-16 | 84.0 |
| MS.gene51452.t1 | AT1G27320 | 25.668 | 187 | 99 | 5 | 603 | 763 | 856 | 1028 | 6.64e-11 | 66.6 |
| MS.gene51452.t1 | AT2G01830 | 23.577 | 369 | 223 | 9 | 344 | 661 | 440 | 800 | 2.06e-12 | 71.6 |
| MS.gene51452.t1 | AT2G17820 | 30.935 | 139 | 95 | 1 | 355 | 492 | 488 | 626 | 2.57e-12 | 71.2 |
| MS.gene51452.t1 | AT2G01830 | 23.577 | 369 | 223 | 9 | 344 | 661 | 428 | 788 | 2.70e-12 | 71.2 |
| MS.gene51452.t1 | AT2G01830 | 23.577 | 369 | 223 | 9 | 344 | 661 | 428 | 788 | 2.70e-12 | 71.2 |
| MS.gene51452.t1 | AT2G01830 | 23.577 | 369 | 223 | 9 | 344 | 661 | 428 | 788 | 2.70e-12 | 71.2 |
| MS.gene51452.t1 | AT2G01830 | 23.577 | 369 | 223 | 9 | 344 | 661 | 428 | 788 | 2.70e-12 | 71.2 |
| MS.gene51452.t1 | AT2G01830 | 23.978 | 367 | 224 | 8 | 344 | 661 | 451 | 811 | 4.13e-12 | 70.5 |
Find 176 sgRNAs with CRISPR-Local
Find 232 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAGGCCTATGCACTCGATTT+TGG | 0.157778 | 1.4:+60457600 | MS.gene51452:CDS |
| TTTCTGAATGGTTGGACTTA+TGG | 0.204071 | 1.4:+60456749 | MS.gene51452:CDS |
| GTGGACTATTGAGAGTATTT+TGG | 0.244417 | 1.4:+60456577 | MS.gene51452:CDS |
| CCTTTGGAGATAAGGTCTTT+TGG | 0.244781 | 1.4:+60457763 | MS.gene51452:CDS |
| CAAATGCATGTGTGTTTATA+AGG | 0.254306 | 1.4:+60457822 | MS.gene51452:CDS |
| TTCCATTCAAGTCATTCTTT+TGG | 0.259941 | 1.4:+60459075 | MS.gene51452:CDS |
| GGAAGTTTAAAAGCGGAAAT+AGG | 0.304993 | 1.4:+60459146 | MS.gene51452:CDS |
| GCAGTCAAGGCAACAATTAT+AGG | 0.308408 | 1.4:-60459169 | None:intergenic |
| GTCTTTACCAAACCATGTTA+TGG | 0.315997 | 1.4:+60457873 | MS.gene51452:CDS |
| GCGCTTGCTGTTTCCAGTCT+TGG | 0.319928 | 1.4:+60457229 | MS.gene51452:CDS |
| CAGACCTCTCAACATTGAAT+TGG | 0.323833 | 1.4:-60458894 | None:intergenic |
| AGCTCAGTGTCCTCAGGTCC+CGG | 0.332201 | 1.4:+60458117 | MS.gene51452:CDS |
| AATTAAGGTGGTTGCTGATC+AGG | 0.332673 | 1.4:+60457417 | MS.gene51452:CDS |
| TTCTTCTTCGGTTTCAATTA+CGG | 0.333952 | 1.4:+60458816 | MS.gene51452:CDS |
| TGTATGCAGATTGGTGTTAA+TGG | 0.343123 | 1.4:+60459220 | MS.gene51452:CDS |
| GTGGAGCTTTCGAAAACATT+AGG | 0.351077 | 1.4:+60457043 | MS.gene51452:CDS |
| CATATTGGTCTTGATTCTTC+CGG | 0.355811 | 1.4:+60457354 | MS.gene51452:CDS |
| GTAAATATTAGATTTGAGAT+AGG | 0.360085 | 1.4:+60458066 | MS.gene51452:CDS |
| TCAGGCTTGTTATGCCATAT+TGG | 0.362096 | 1.4:+60457339 | MS.gene51452:CDS |
| TGCTTCTCAAAGTGAAGGTC+AGG | 0.367109 | 1.4:+60456873 | MS.gene51452:CDS |
| TTTGAATGCCTTACTGTCAT+TGG | 0.369155 | 1.4:+60459013 | MS.gene51452:CDS |
| CTCCAAATGCCTGATATAGA+TGG | 0.374320 | 1.4:+60459100 | MS.gene51452:CDS |
| CTTATAAACACACATGCATT+TGG | 0.375755 | 1.4:-60457821 | None:intergenic |
| TCAGGAGCTGGAGATAATTA+AGG | 0.381209 | 1.4:+60457402 | MS.gene51452:CDS |
| TCTTTACCAAACCATGTTAT+GGG | 0.386190 | 1.4:+60457874 | MS.gene51452:CDS |
| ATCCATCTATATCAGGCATT+TGG | 0.388907 | 1.4:-60459102 | None:intergenic |
| GGATGATGGAAGATTTCCTT+TGG | 0.389319 | 1.4:+60457747 | MS.gene51452:CDS |
| ACAACATCTGGATCAGTAAT+CGG | 0.399774 | 1.4:-60457160 | None:intergenic |
| TACTATTCTGTATACTACTT+TGG | 0.402484 | 1.4:+60457021 | MS.gene51452:CDS |
| TGAGGAATACCGTGAGTATA+TGG | 0.405398 | 1.4:-60458782 | None:intergenic |
| GCTCGAACGTCCCTTTCAAA+TGG | 0.406052 | 1.4:+60456678 | MS.gene51452:CDS |
| AAAGCATGACACTTCTTCTT+CGG | 0.410525 | 1.4:+60458804 | MS.gene51452:CDS |
| GGATTGTAACCATGGGGAAG+GGG | 0.412828 | 1.4:+60457948 | MS.gene51452:CDS |
| ACTTCGAATCCATCTATATC+AGG | 0.414647 | 1.4:-60459109 | None:intergenic |
| GATCCTAGTATTTCGAGTTT+CGG | 0.416197 | 1.4:+60457972 | MS.gene51452:CDS |
| GCTCAGTGTCCTCAGGTCCC+GGG | 0.416308 | 1.4:+60458118 | MS.gene51452:CDS |
| TTCCGTGACTTCCGCTTCTA+CGG | 0.417846 | 1.4:+60458988 | MS.gene51452:CDS |
| TCAACTTATGAGAGAGAAGT+TGG | 0.419273 | 1.4:+60457480 | MS.gene51452:CDS |
| CTTTAAGATTCTCACTGCCT+TGG | 0.419423 | 1.4:+60456808 | MS.gene51452:CDS |
| AGTCAAGGGAGGAATGAAAA+AGG | 0.420629 | 1.4:+60458006 | MS.gene51452:CDS |
| GAAGATTTCCTTTGGAGATA+AGG | 0.424573 | 1.4:+60457755 | MS.gene51452:CDS |
| GATTGTAACCATGGGGAAGG+GGG | 0.427873 | 1.4:+60457949 | MS.gene51452:CDS |
| TCCGTGACTTCCGCTTCTAC+GGG | 0.428889 | 1.4:+60458989 | MS.gene51452:CDS |
| GAATGCTATGATGGCAAGCC+AGG | 0.432214 | 1.4:+60457537 | MS.gene51452:CDS |
| CATGTGTGTTTATAAGGGCT+TGG | 0.432309 | 1.4:+60457828 | MS.gene51452:CDS |
| TCGAAGTCGCCGCAAGGATT+CGG | 0.432385 | 1.4:+60459125 | MS.gene51452:CDS |
| TCCATTCAAGTCATTACTGT+TGG | 0.437971 | 1.4:+60459049 | MS.gene51452:CDS |
| ACCTAGATCTTGGAGCAATC+AGG | 0.441634 | 1.4:+60457384 | MS.gene51452:CDS |
| CTGCCGAAACTCGAAATACT+AGG | 0.444425 | 1.4:-60457975 | None:intergenic |
| GCTCCAAGATCTAGGTTCTT+CGG | 0.445823 | 1.4:-60457377 | None:intergenic |
| TTCTTCTGCACTTGCAGTCA+AGG | 0.446455 | 1.4:-60459182 | None:intergenic |
| ACTAGATGAGCTTGGTCTCC+AGG | 0.446804 | 1.4:-60458037 | None:intergenic |
| AGTTGATGCAAGGAAACTTA+TGG | 0.447288 | 1.4:+60458753 | MS.gene51452:intron |
| ATGTGTGTTTATAAGGGCTT+GGG | 0.448667 | 1.4:+60457829 | MS.gene51452:CDS |
| TCATCACCCATAACATGGTT+TGG | 0.448703 | 1.4:-60457880 | None:intergenic |
| TCCTGATTGCTCCAAGATCT+AGG | 0.449928 | 1.4:-60457385 | None:intergenic |
| CGGAAGAATCAAGACCAATA+TGG | 0.450177 | 1.4:-60457353 | None:intergenic |
| GGCATTCGAATGGCAGCAAC+CGG | 0.452555 | 1.4:-60457271 | None:intergenic |
| GCAATTCCTTGCATCAAAAC+CGG | 0.454415 | 1.4:-60459256 | None:intergenic |
| CGGCCGAAGAACCTAGATCT+TGG | 0.454895 | 1.4:+60457374 | MS.gene51452:CDS |
| CTCGAACGTCCCTTTCAAAT+GGG | 0.457846 | 1.4:+60456679 | MS.gene51452:CDS |
| GCGCAATCGAGCTTTGCAAC+TGG | 0.458884 | 1.4:+60457507 | MS.gene51452:CDS |
| AACAGTAGTGATTCTGAAGT+TGG | 0.461479 | 1.4:+60458093 | MS.gene51452:CDS |
| TAATGGAGTAATCCGAAAAC+CGG | 0.467924 | 1.4:+60459237 | MS.gene51452:CDS |
| GCATATGGTTGGGAATCTAC+TGG | 0.475238 | 1.4:+60457927 | MS.gene51452:CDS |
| ACGAAATAAAGCAACTCAAG+AGG | 0.478092 | 1.4:-60456650 | None:intergenic |
| AGAAGAAGTGTCATGCTTTG+AGG | 0.480685 | 1.4:-60458800 | None:intergenic |
| GAATGCTTACTCAAGAGATT+CGG | 0.482071 | 1.4:+60456981 | MS.gene51452:CDS |
| AAGTCATGAGTGATGGTATG+AGG | 0.483265 | 1.4:+60457578 | MS.gene51452:CDS |
| TGGGATCTTGGACGGGAGGT+TGG | 0.484581 | 1.4:+60456920 | MS.gene51452:CDS |
| GTTGGCAGCTCAGTGTCCTC+AGG | 0.485068 | 1.4:+60458111 | MS.gene51452:CDS |
| TCTGAAATGAGTTTCTTGCC+TGG | 0.486268 | 1.4:-60457555 | None:intergenic |
| ATCCAAAAGAATGACTTGAA+TGG | 0.489294 | 1.4:-60459077 | None:intergenic |
| AAATGCATGTGTGTTTATAA+GGG | 0.490040 | 1.4:+60457823 | MS.gene51452:CDS |
| TGGTCTTATTATGAAGCAAA+AGG | 0.490084 | 1.4:+60456940 | MS.gene51452:CDS |
| CATCATTTATCAAGTTTGAA+AGG | 0.492324 | 1.4:-60457705 | None:intergenic |
| TAAATATTAGATTTGAGATA+GGG | 0.495686 | 1.4:+60458067 | MS.gene51452:CDS |
| ATATACCAGTGATAGATATG+AGG | 0.497274 | 1.4:+60458149 | MS.gene51452:CDS |
| ATCTTGGAGCAATCAGGAGC+TGG | 0.497970 | 1.4:+60457390 | MS.gene51452:CDS |
| TCCTTTGCTTCTCAAAGTGA+AGG | 0.498700 | 1.4:+60456868 | MS.gene51452:CDS |
| CTCAGTGTCCTCAGGTCCCG+GGG | 0.500200 | 1.4:+60458119 | MS.gene51452:CDS |
| TCATCATCACAATTACATCT+AGG | 0.500845 | 1.4:-60456545 | None:intergenic |
| GACAGCTCTGCAAAGGATGA+TGG | 0.501785 | 1.4:+60457733 | MS.gene51452:CDS |
| TCCCGTAGAAGCGGAAGTCA+CGG | 0.504322 | 1.4:-60458990 | None:intergenic |
| TTTCGAGTTTCGGCAGACGC+TGG | 0.505966 | 1.4:+60457982 | MS.gene51452:CDS |
| TGGATTGTAACCATGGGGAA+GGG | 0.508641 | 1.4:+60457947 | MS.gene51452:CDS |
| TATTCTGTATACTACTTTGG+TGG | 0.509087 | 1.4:+60457024 | MS.gene51452:CDS |
| GAGAGGTCTGCAAGTTCTGT+TGG | 0.509235 | 1.4:+60458907 | MS.gene51452:CDS |
| ATTGTAACCATGGGGAAGGG+GGG | 0.512664 | 1.4:+60457950 | MS.gene51452:CDS |
| TGGTGATTTCTTGATTGCTG+TGG | 0.516847 | 1.4:+60456613 | MS.gene51452:CDS |
| AAGTGCAGAAGAAGATTTGT+GGG | 0.517262 | 1.4:+60459192 | MS.gene51452:CDS |
| CTTACTGTCATTGGACCTGT+TGG | 0.517705 | 1.4:+60459022 | MS.gene51452:CDS |
| ACCTTCACTTTGAGAAGCAA+AGG | 0.521628 | 1.4:-60456869 | None:intergenic |
| CAACAGGTCCAATGACAGTA+AGG | 0.522523 | 1.4:-60459021 | None:intergenic |
| CTCAAGAGGGATTGAGAAGT+AGG | 0.523719 | 1.4:-60456636 | None:intergenic |
| TCCAACAGTAATGACTTGAA+TGG | 0.525361 | 1.4:-60459050 | None:intergenic |
| TGTTTCTAGTGACGCAGGAC+CGG | 0.528437 | 1.4:+60457252 | MS.gene51452:CDS |
| GTTGCGTTCTGAAGATTCCC+CGG | 0.528905 | 1.4:-60458867 | None:intergenic |
| AAATTACAAACACGTAACAT+TGG | 0.530189 | 1.4:-60457292 | None:intergenic |
| GGCGAGAAGGAATGCTATGA+TGG | 0.531744 | 1.4:+60457528 | MS.gene51452:CDS |
| TCGGCAGACGCTGGAAGTCA+AGG | 0.534100 | 1.4:+60457991 | MS.gene51452:CDS |
| AAACTTGATAAATGATGCCA+TGG | 0.538571 | 1.4:+60457711 | MS.gene51452:CDS |
| CTCAAAAGAATTCTGATGCA+AGG | 0.538760 | 1.4:+60459286 | MS.gene51452:CDS |
| ATCTACTGGATTGTAACCAT+GGG | 0.542949 | 1.4:+60457941 | MS.gene51452:CDS |
| TTGCGTTCTGAAGATTCCCC+GGG | 0.544742 | 1.4:-60458866 | None:intergenic |
| GAACAAGGACCCATTTGAAA+GGG | 0.546654 | 1.4:-60456688 | None:intergenic |
| TCTGCCCTCATATCTATCAC+TGG | 0.547398 | 1.4:-60458154 | None:intergenic |
| TGAACAAGGACCCATTTGAA+AGG | 0.548158 | 1.4:-60456689 | None:intergenic |
| GCAATAGCCATCTCTGAACC+CGG | 0.551030 | 1.4:+60458848 | MS.gene51452:CDS |
| GGCAGTGAGAATCTTAAAGA+TGG | 0.551039 | 1.4:-60456804 | None:intergenic |
| ACTTGAATGGAAGATCCAAC+AGG | 0.554016 | 1.4:-60459037 | None:intergenic |
| CAAGTGCAGAAGAAGATTTG+TGG | 0.554779 | 1.4:+60459191 | MS.gene51452:CDS |
| TAACAAGCCTGAGTTAGCTC+AGG | 0.557598 | 1.4:-60457328 | None:intergenic |
| ACATCACCACTAGATGAGCT+TGG | 0.559230 | 1.4:-60458045 | None:intergenic |
| CGAAATAAAGCAACTCAAGA+GGG | 0.560282 | 1.4:-60456649 | None:intergenic |
| TTCAGAGATGGCTATTGCAA+TGG | 0.562065 | 1.4:-60458843 | None:intergenic |
| TGTTAATTGCAGTTGATGCA+AGG | 0.562733 | 1.4:+60458743 | MS.gene51452:intron |
| TATTTGCAAGAGGATAGTCC+AGG | 0.567491 | 1.4:+60458188 | MS.gene51452:CDS |
| AATCTACTGGATTGTAACCA+TGG | 0.568873 | 1.4:+60457940 | MS.gene51452:CDS |
| TGGGAAAGATGTATGCAGAT+TGG | 0.570128 | 1.4:+60459211 | MS.gene51452:CDS |
| ATCCTTTGCAGAGCTGTCCA+TGG | 0.572923 | 1.4:-60457728 | None:intergenic |
| GTGATGATGAGAACAGTTTG+TGG | 0.575845 | 1.4:+60456558 | MS.gene51452:CDS |
| CTGGATTGTAACCATGGGGA+AGG | 0.575928 | 1.4:+60457946 | MS.gene51452:CDS |
| AAAGACATGGGATCTTGGAC+GGG | 0.576526 | 1.4:+60456913 | MS.gene51452:CDS |
| AAAAGACATGGGATCTTGGA+CGG | 0.578361 | 1.4:+60456912 | MS.gene51452:CDS |
| GAATGAACAGAAGCTTATTG+TGG | 0.580973 | 1.4:+60457657 | MS.gene51452:CDS |
| CAATAGCCATCTCTGAACCC+GGG | 0.581848 | 1.4:+60458849 | MS.gene51452:CDS |
| TCCTCTCATCACCCATAACA+TGG | 0.582290 | 1.4:-60457885 | None:intergenic |
| GTCACTAGAAACACCAAGAC+TGG | 0.584089 | 1.4:-60457242 | None:intergenic |
| CAAGATCTAGGTTCTTCGGC+CGG | 0.584183 | 1.4:-60457373 | None:intergenic |
| CAGAATAGTATGTCTATCGA+GGG | 0.585211 | 1.4:-60457008 | None:intergenic |
| GAGATGGCTATTGCAATGGA+AGG | 0.587280 | 1.4:-60458839 | None:intergenic |
| CGGCAGACGCTGGAAGTCAA+GGG | 0.589768 | 1.4:+60457992 | MS.gene51452:CDS |
| TGAGCTTTAGTATTTGCAAG+AGG | 0.590203 | 1.4:+60458178 | MS.gene51452:CDS |
| AGGAACACCTGAGCTAACTC+AGG | 0.590712 | 1.4:+60457321 | MS.gene51452:CDS |
| TGCAGCATGCGATAGAGCCA+CGG | 0.591811 | 1.4:-60457443 | None:intergenic |
| CCAAAAGACCTTATCTCCAA+AGG | 0.594431 | 1.4:-60457763 | None:intergenic |
| ACCATGTTATGGGTGATGAG+AGG | 0.595070 | 1.4:+60457884 | MS.gene51452:CDS |
| ATGTTATGGGTGATGAGAGG+AGG | 0.595173 | 1.4:+60457887 | MS.gene51452:CDS |
| GAGCTTTGCAACTGGCGAGA+AGG | 0.595611 | 1.4:+60457515 | MS.gene51452:CDS |
| AGATTCCCCGGGTTCAGAGA+TGG | 0.597080 | 1.4:-60458855 | None:intergenic |
| GCTTCTCAAAGTGAAGGTCA+GGG | 0.597196 | 1.4:+60456874 | MS.gene51452:CDS |
| ATGGATTCGAAGTCGCCGCA+AGG | 0.597554 | 1.4:+60459119 | MS.gene51452:CDS |
| TCACTCATGAATTGAACGCA+AGG | 0.600049 | 1.4:+60457119 | MS.gene51452:CDS |
| GCATTCAAATCCCGTAGAAG+CGG | 0.602716 | 1.4:-60458999 | None:intergenic |
| TATTCCAATTCAATGTTGAG+AGG | 0.606759 | 1.4:+60458890 | MS.gene51452:CDS |
| TGTTATGGGTGATGAGAGGA+GGG | 0.608371 | 1.4:+60457888 | MS.gene51452:CDS |
| ACTGGTATATGTCCTACCCC+CGG | 0.609146 | 1.4:-60458136 | None:intergenic |
| AAACACACATGCATTTGGCA+AGG | 0.611821 | 1.4:-60457816 | None:intergenic |
| GACATGGGATCTTGGACGGG+AGG | 0.611959 | 1.4:+60456916 | MS.gene51452:CDS |
| TTTCAGAAAGTCATGAGTGA+TGG | 0.612216 | 1.4:+60457571 | MS.gene51452:CDS |
| AGATACACACAAGAGGATAG+AGG | 0.612399 | 1.4:-60456501 | None:intergenic |
| TTTAAACTTCCGAATCCTTG+CGG | 0.614777 | 1.4:-60459134 | None:intergenic |
| ACAGAATAGTATGTCTATCG+AGG | 0.617871 | 1.4:-60457009 | None:intergenic |
| TATACCAGTGATAGATATGA+GGG | 0.618668 | 1.4:+60458150 | MS.gene51452:CDS |
| CTTGGTGTTTCTAGTGACGC+AGG | 0.622071 | 1.4:+60457247 | MS.gene51452:CDS |
| AATCCCAAAATCGAGTGCAT+AGG | 0.622628 | 1.4:-60457604 | None:intergenic |
| ACGTAACATTGGCATTCGAA+TGG | 0.630068 | 1.4:-60457281 | None:intergenic |
| GATGCAAGGAAACTTATGGT+TGG | 0.630539 | 1.4:+60458757 | MS.gene51452:CDS |
| CGCAGTTGCACAAGACACCA+AGG | 0.633662 | 1.4:-60456825 | None:intergenic |
| TGCCATGGACAGCTCTGCAA+AGG | 0.638516 | 1.4:+60457726 | MS.gene51452:CDS |
| TCTTATTATGAAGCAAAAGG+AGG | 0.642117 | 1.4:+60456943 | MS.gene51452:CDS |
| GGTTGCTGATCAGGTTGCCG+TGG | 0.646373 | 1.4:+60457426 | MS.gene51452:CDS |
| TAAAAGCAATGAACTGAACA+AGG | 0.647813 | 1.4:-60456703 | None:intergenic |
| TTGTTGCAGATACACACAAG+AGG | 0.652660 | 1.4:-60456508 | None:intergenic |
| GTTTGCAAAATTGTGCTGTG+TGG | 0.653112 | 1.4:+60457065 | MS.gene51452:CDS |
| TGGAGACCAAGCTCATCTAG+TGG | 0.665111 | 1.4:+60458039 | MS.gene51452:CDS |
| AGGATTCGGAAGTTTAAAAG+CGG | 0.670736 | 1.4:+60459139 | MS.gene51452:CDS |
| GGAGCTGGAGATAATTAAGG+TGG | 0.673703 | 1.4:+60457405 | MS.gene51452:CDS |
| ACCATAAGCTGAAAAGTGTG+AGG | 0.673832 | 1.4:-60456773 | None:intergenic |
| AATAGCCATCTCTGAACCCG+GGG | 0.674767 | 1.4:+60458850 | MS.gene51452:CDS |
| TCATGAGTGATGGTATGAGG+AGG | 0.683443 | 1.4:+60457581 | MS.gene51452:CDS |
| TGGTTGGTACCATATACTCA+CGG | 0.687045 | 1.4:+60458773 | MS.gene51452:CDS |
| CAGACGCTGGAAGTCAAGGG+AGG | 0.709276 | 1.4:+60457995 | MS.gene51452:CDS |
| TCTACTGGATTGTAACCATG+GGG | 0.741326 | 1.4:+60457942 | MS.gene51452:CDS |
| TCAGTGTCCTCAGGTCCCGG+GGG | 0.744374 | 1.4:+60458120 | MS.gene51452:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAAATATTAGATTTGAGATA+GGG | + | chr1.4:60458067-60458086 | MS.gene51452:CDS | 15.0% |
| !! | AAAAATTAACTCAGAATACA+AGG | - | chr1.4:60458685-60458704 | None:intergenic | 20.0% |
| !! | GAAATTAAGTAATCAAATCA+AGG | - | chr1.4:60458714-60458733 | None:intergenic | 20.0% |
| !!! | AGTTACATTGTTTGTTATAT+GGG | + | chr1.4:60458213-60458232 | MS.gene51452:intron | 20.0% |
| !!! | GTAAATATTAGATTTGAGAT+AGG | + | chr1.4:60458066-60458085 | MS.gene51452:CDS | 20.0% |
| !!! | TTACGTGTTTGTAATTTTAA+AGG | + | chr1.4:60457298-60457317 | MS.gene51452:CDS | 20.0% |
| ! | AAATGCATGTGTGTTTATAA+GGG | + | chr1.4:60457823-60457842 | MS.gene51452:CDS | 25.0% |
| ! | AAATTACAAACACGTAACAT+TGG | - | chr1.4:60457295-60457314 | None:intergenic | 25.0% |
| ! | CATCATTTATCAAGTTTGAA+AGG | - | chr1.4:60457708-60457727 | None:intergenic | 25.0% |
| ! | CCAGATGTTGTAAAAATTAA+GGG | + | chr1.4:60457172-60457191 | MS.gene51452:CDS | 25.0% |
| ! | TACTATTCTGTATACTACTT+TGG | + | chr1.4:60457021-60457040 | MS.gene51452:CDS | 25.0% |
| ! | TCCAGATGTTGTAAAAATTA+AGG | + | chr1.4:60457171-60457190 | MS.gene51452:CDS | 25.0% |
| !!! | ATTGCTTTTATAGTACTATG+TGG | + | chr1.4:60456716-60456735 | MS.gene51452:CDS | 25.0% |
| !!! | GAGTTACATTGTTTGTTATA+TGG | + | chr1.4:60458212-60458231 | MS.gene51452:intron | 25.0% |
| AAACTTGATAAATGATGCCA+TGG | + | chr1.4:60457711-60457730 | MS.gene51452:CDS | 30.0% | |
| AACATATTCCACAGTATTCA+AGG | - | chr1.4:60458422-60458441 | None:intergenic | 30.0% | |
| ATATACCAGTGATAGATATG+AGG | + | chr1.4:60458149-60458168 | MS.gene51452:CDS | 30.0% | |
| ATCCAAAAGAATGACTTGAA+TGG | - | chr1.4:60459080-60459099 | None:intergenic | 30.0% | |
| ATGTCACACAAACAATGAAA+AGG | - | chr1.4:60458341-60458360 | None:intergenic | 30.0% | |
| CAAATGCATGTGTGTTTATA+AGG | + | chr1.4:60457822-60457841 | MS.gene51452:CDS | 30.0% | |
| CTTATAAACACACATGCATT+TGG | - | chr1.4:60457824-60457843 | None:intergenic | 30.0% | |
| GTAAAAATTAAGGGAAGCAA+TGG | + | chr1.4:60457181-60457200 | MS.gene51452:CDS | 30.0% | |
| GTGACATAAATAGCTGAATT+TGG | + | chr1.4:60458354-60458373 | MS.gene51452:intron | 30.0% | |
| TAAAAGCAATGAACTGAACA+AGG | - | chr1.4:60456706-60456725 | None:intergenic | 30.0% | |
| TAATGCGTGTTCGATATATT+TGG | + | chr1.4:60458579-60458598 | MS.gene51452:intron | 30.0% | |
| TATACCAGTGATAGATATGA+GGG | + | chr1.4:60458150-60458169 | MS.gene51452:CDS | 30.0% | |
| TATTCCAATTCAATGTTGAG+AGG | + | chr1.4:60458890-60458909 | MS.gene51452:CDS | 30.0% | |
| TATTCTGTATACTACTTTGG+TGG | + | chr1.4:60457024-60457043 | MS.gene51452:CDS | 30.0% | |
| TCATCATCACAATTACATCT+AGG | - | chr1.4:60456548-60456567 | None:intergenic | 30.0% | |
| TCTTATTATGAAGCAAAAGG+AGG | + | chr1.4:60456943-60456962 | MS.gene51452:CDS | 30.0% | |
| TCTTTACCAAACCATGTTAT+GGG | + | chr1.4:60457874-60457893 | MS.gene51452:CDS | 30.0% | |
| TTCTTCTTCGGTTTCAATTA+CGG | + | chr1.4:60458816-60458835 | MS.gene51452:CDS | 30.0% | |
| ! | ATCACTGTCTTTTCTTCATT+TGG | - | chr1.4:60457094-60457113 | None:intergenic | 30.0% |
| ! | CCCTTAATTTTTACAACATC+TGG | - | chr1.4:60457175-60457194 | None:intergenic | 30.0% |
| ! | TTCCATTCAAGTCATTCTTT+TGG | + | chr1.4:60459075-60459094 | MS.gene51452:CDS | 30.0% |
| !! | CGTGTTTGTAATTTTAAAGG+AGG | + | chr1.4:60457301-60457320 | MS.gene51452:CDS | 30.0% |
| !! | TGGTCTTATTATGAAGCAAA+AGG | + | chr1.4:60456940-60456959 | MS.gene51452:CDS | 30.0% |
| !! | TTGTTTGTTATATGGGTTCA+TGG | + | chr1.4:60458220-60458239 | MS.gene51452:intron | 30.0% |
| !!! | TTTTCAGGTGATTTTGCATA+TGG | + | chr1.4:60457912-60457931 | MS.gene51452:CDS | 30.0% |
| AAAGCATGACACTTCTTCTT+CGG | + | chr1.4:60458804-60458823 | MS.gene51452:CDS | 35.0% | |
| AACAAACAATGTAACTCACC+TGG | - | chr1.4:60458209-60458228 | None:intergenic | 35.0% | |
| AAGAAAAAGACATGGGATCT+TGG | + | chr1.4:60456908-60456927 | MS.gene51452:CDS | 35.0% | |
| AAGTGCAGAAGAAGATTTGT+GGG | + | chr1.4:60459192-60459211 | MS.gene51452:CDS | 35.0% | |
| AATCTACTGGATTGTAACCA+TGG | + | chr1.4:60457940-60457959 | MS.gene51452:CDS | 35.0% | |
| ACAACATCTGGATCAGTAAT+CGG | - | chr1.4:60457163-60457182 | None:intergenic | 35.0% | |
| ACAGAATAGTATGTCTATCG+AGG | - | chr1.4:60457012-60457031 | None:intergenic | 35.0% | |
| ACATCTTGCGAAACTGAATT+TGG | + | chr1.4:60458298-60458317 | MS.gene51452:intron | 35.0% | |
| ACGAAATAAAGCAACTCAAG+AGG | - | chr1.4:60456653-60456672 | None:intergenic | 35.0% | |
| ACTTCGAATCCATCTATATC+AGG | - | chr1.4:60459112-60459131 | None:intergenic | 35.0% | |
| AGGATTCGGAAGTTTAAAAG+CGG | + | chr1.4:60459139-60459158 | MS.gene51452:CDS | 35.0% | |
| AGGATTCTAACTAACATCAC+AGG | - | chr1.4:60458490-60458509 | None:intergenic | 35.0% | |
| ATCCATCTATATCAGGCATT+TGG | - | chr1.4:60459105-60459124 | None:intergenic | 35.0% | |
| ATCTACTGGATTGTAACCAT+GGG | + | chr1.4:60457941-60457960 | MS.gene51452:CDS | 35.0% | |
| ATGTGTGTTTATAAGGGCTT+GGG | + | chr1.4:60457829-60457848 | MS.gene51452:CDS | 35.0% | |
| CAAAAACTGCTTCAGAAACT+AGG | + | chr1.4:60458962-60458981 | MS.gene51452:CDS | 35.0% | |
| CAGAATAGTATGTCTATCGA+GGG | - | chr1.4:60457011-60457030 | None:intergenic | 35.0% | |
| CATGCTCAAGAAAAAGACAT+GGG | + | chr1.4:60456901-60456920 | MS.gene51452:CDS | 35.0% | |
| CGAAATAAAGCAACTCAAGA+GGG | - | chr1.4:60456652-60456671 | None:intergenic | 35.0% | |
| CTCAAAAGAATTCTGATGCA+AGG | + | chr1.4:60459286-60459305 | MS.gene51452:CDS | 35.0% | |
| GAATGAACAGAAGCTTATTG+TGG | + | chr1.4:60457657-60457676 | MS.gene51452:CDS | 35.0% | |
| GAATGCTTACTCAAGAGATT+CGG | + | chr1.4:60456981-60457000 | MS.gene51452:CDS | 35.0% | |
| GGAAGTTTAAAAGCGGAAAT+AGG | + | chr1.4:60459146-60459165 | MS.gene51452:CDS | 35.0% | |
| GTCTTTACCAAACCATGTTA+TGG | + | chr1.4:60457873-60457892 | MS.gene51452:CDS | 35.0% | |
| TAACATTACAACGCATAGCT+TGG | - | chr1.4:60458651-60458670 | None:intergenic | 35.0% | |
| TAATGGAGTAATCCGAAAAC+CGG | + | chr1.4:60459237-60459256 | MS.gene51452:CDS | 35.0% | |
| TCAACTTATGAGAGAGAAGT+TGG | + | chr1.4:60457480-60457499 | MS.gene51452:CDS | 35.0% | |
| TCATGCTCAAGAAAAAGACA+TGG | + | chr1.4:60456900-60456919 | MS.gene51452:CDS | 35.0% | |
| TCCAACAGTAATGACTTGAA+TGG | - | chr1.4:60459053-60459072 | None:intergenic | 35.0% | |
| TCCATTCAAGTCATTACTGT+TGG | + | chr1.4:60459049-60459068 | MS.gene51452:CDS | 35.0% | |
| TTTAAACTTCCGAATCCTTG+CGG | - | chr1.4:60459137-60459156 | None:intergenic | 35.0% | |
| TTTCAGAAAGTCATGAGTGA+TGG | + | chr1.4:60457571-60457590 | MS.gene51452:CDS | 35.0% | |
| TTTCTGAATGGTTGGACTTA+TGG | + | chr1.4:60456749-60456768 | MS.gene51452:CDS | 35.0% | |
| TTTGAATGCCTTACTGTCAT+TGG | + | chr1.4:60459013-60459032 | MS.gene51452:CDS | 35.0% | |
| ! | AGGTGATTTTGCATATGGTT+GGG | + | chr1.4:60457917-60457936 | MS.gene51452:CDS | 35.0% |
| ! | AGTTGATGCAAGGAAACTTA+TGG | + | chr1.4:60458753-60458772 | MS.gene51452:intron | 35.0% |
| ! | ATCTGGAATCGGAATGTTAT+TGG | + | chr1.4:60458531-60458550 | MS.gene51452:intron | 35.0% |
| ! | CATAAGAGCAAATCTGGAAT+CGG | + | chr1.4:60458520-60458539 | MS.gene51452:intron | 35.0% |
| ! | GAAGATTTCCTTTGGAGATA+AGG | + | chr1.4:60457755-60457774 | MS.gene51452:CDS | 35.0% |
| ! | GGATTGACACATTTTCTGAA+TGG | + | chr1.4:60456737-60456756 | MS.gene51452:CDS | 35.0% |
| ! | TCCAGATTTGCTCTTATGAT+GGG | - | chr1.4:60458518-60458537 | None:intergenic | 35.0% |
| ! | TGACACATTTTCTGAATGGT+TGG | + | chr1.4:60456741-60456760 | MS.gene51452:CDS | 35.0% |
| ! | TGAGCTTTAGTATTTGCAAG+AGG | + | chr1.4:60458178-60458197 | MS.gene51452:CDS | 35.0% |
| ! | TGCTCTTATGATGGGAAAAT+AGG | - | chr1.4:60458510-60458529 | None:intergenic | 35.0% |
| ! | TGTGTTTTCCTTGAATACTG+TGG | + | chr1.4:60458411-60458430 | MS.gene51452:intron | 35.0% |
| ! | TGTTAATTGCAGTTGATGCA+AGG | + | chr1.4:60458743-60458762 | MS.gene51452:intron | 35.0% |
| ! | TTCCAGATTTGCTCTTATGA+TGG | - | chr1.4:60458519-60458538 | None:intergenic | 35.0% |
| !! | AACAGTAGTGATTCTGAAGT+TGG | + | chr1.4:60458093-60458112 | MS.gene51452:CDS | 35.0% |
| !! | CATATTGGTCTTGATTCTTC+CGG | + | chr1.4:60457354-60457373 | MS.gene51452:CDS | 35.0% |
| !! | CTTTGGAGATAAGGTCTTTT+GGG | + | chr1.4:60457764-60457783 | MS.gene51452:CDS | 35.0% |
| !! | GATCCTAGTATTTCGAGTTT+CGG | + | chr1.4:60457972-60457991 | MS.gene51452:CDS | 35.0% |
| !! | GTTATTGGTGTTGTATCTCT+AGG | + | chr1.4:60458546-60458565 | MS.gene51452:intron | 35.0% |
| !! | TGTATGCAGATTGGTGTTAA+TGG | + | chr1.4:60459220-60459239 | MS.gene51452:CDS | 35.0% |
| !!! | ATTTTGGAGTGTCAAAGAGT+TGG | + | chr1.4:60456593-60456612 | MS.gene51452:CDS | 35.0% |
| !!! | GTGGACTATTGAGAGTATTT+TGG | + | chr1.4:60456577-60456596 | MS.gene51452:CDS | 35.0% |
| AAAAGACATGGGATCTTGGA+CGG | + | chr1.4:60456912-60456931 | MS.gene51452:CDS | 40.0% | |
| AAACACACATGCATTTGGCA+AGG | - | chr1.4:60457819-60457838 | None:intergenic | 40.0% | |
| AAGGGAGGAATGAAAAAGGA+TGG | + | chr1.4:60458010-60458029 | MS.gene51452:CDS | 40.0% | |
| AAGTCATGAGTGATGGTATG+AGG | + | chr1.4:60457578-60457597 | MS.gene51452:CDS | 40.0% | |
| AATCCCAAAATCGAGTGCAT+AGG | - | chr1.4:60457607-60457626 | None:intergenic | 40.0% | |
| AATTAAGGTGGTTGCTGATC+AGG | + | chr1.4:60457417-60457436 | MS.gene51452:CDS | 40.0% | |
| ACGTAACATTGGCATTCGAA+TGG | - | chr1.4:60457284-60457303 | None:intergenic | 40.0% | |
| ACTTGAATGGAAGATCCAAC+AGG | - | chr1.4:60459040-60459059 | None:intergenic | 40.0% | |
| AGATACACACAAGAGGATAG+AGG | - | chr1.4:60456504-60456523 | None:intergenic | 40.0% | |
| AGGGAGGAATGAAAAAGGAT+GGG | + | chr1.4:60458011-60458030 | MS.gene51452:CDS | 40.0% | |
| AGTCAAGGGAGGAATGAAAA+AGG | + | chr1.4:60458006-60458025 | MS.gene51452:CDS | 40.0% | |
| CAAGTGCAGAAGAAGATTTG+TGG | + | chr1.4:60459191-60459210 | MS.gene51452:CDS | 40.0% | |
| CAGACCTCTCAACATTGAAT+TGG | - | chr1.4:60458897-60458916 | None:intergenic | 40.0% | |
| CATGTGTGTTTATAAGGGCT+TGG | + | chr1.4:60457828-60457847 | MS.gene51452:CDS | 40.0% | |
| CCAAAAGACCTTATCTCCAA+AGG | - | chr1.4:60457766-60457785 | None:intergenic | 40.0% | |
| CGGAAGAATCAAGACCAATA+TGG | - | chr1.4:60457356-60457375 | None:intergenic | 40.0% | |
| CTCCAAATGCCTGATATAGA+TGG | + | chr1.4:60459100-60459119 | MS.gene51452:CDS | 40.0% | |
| GAACAAGGACCCATTTGAAA+GGG | - | chr1.4:60456691-60456710 | None:intergenic | 40.0% | |
| GATGCAAGGAAACTTATGGT+TGG | + | chr1.4:60458757-60458776 | MS.gene51452:CDS | 40.0% | |
| GCAATTCCTTGCATCAAAAC+CGG | - | chr1.4:60459259-60459278 | None:intergenic | 40.0% | |
| GCAGTCAAGGCAACAATTAT+AGG | - | chr1.4:60459172-60459191 | None:intergenic | 40.0% | |
| GGCAGTGAGAATCTTAAAGA+TGG | - | chr1.4:60456807-60456826 | None:intergenic | 40.0% | |
| GTGGAGCTTTCGAAAACATT+AGG | + | chr1.4:60457043-60457062 | MS.gene51452:CDS | 40.0% | |
| GTTTGCAAAATTGTGCTGTG+TGG | + | chr1.4:60457065-60457084 | MS.gene51452:CDS | 40.0% | |
| TATTTGCAAGAGGATAGTCC+AGG | + | chr1.4:60458188-60458207 | MS.gene51452:CDS | 40.0% | |
| TCACTCATGAATTGAACGCA+AGG | + | chr1.4:60457119-60457138 | MS.gene51452:CDS | 40.0% | |
| TCAGGAGCTGGAGATAATTA+AGG | + | chr1.4:60457402-60457421 | MS.gene51452:CDS | 40.0% | |
| TCATCACCCATAACATGGTT+TGG | - | chr1.4:60457883-60457902 | None:intergenic | 40.0% | |
| TCCCATCATAAGAGCAAATC+TGG | + | chr1.4:60458514-60458533 | MS.gene51452:intron | 40.0% | |
| TCCTTTGCTTCTCAAAGTGA+AGG | + | chr1.4:60456868-60456887 | MS.gene51452:CDS | 40.0% | |
| TCTACTGGATTGTAACCATG+GGG | + | chr1.4:60457942-60457961 | MS.gene51452:CDS | 40.0% | |
| TGAACAAGGACCCATTTGAA+AGG | - | chr1.4:60456692-60456711 | None:intergenic | 40.0% | |
| TGAGGAATACCGTGAGTATA+TGG | - | chr1.4:60458785-60458804 | None:intergenic | 40.0% | |
| TGGGAAAGATGTATGCAGAT+TGG | + | chr1.4:60459211-60459230 | MS.gene51452:CDS | 40.0% | |
| TGGTGATTTCTTGATTGCTG+TGG | + | chr1.4:60456613-60456632 | MS.gene51452:CDS | 40.0% | |
| TTCAGAGATGGCTATTGCAA+TGG | - | chr1.4:60458846-60458865 | None:intergenic | 40.0% | |
| TTGTTGCAGATACACACAAG+AGG | - | chr1.4:60456511-60456530 | None:intergenic | 40.0% | |
| ! | ACCATAAGCTGAAAAGTGTG+AGG | - | chr1.4:60456776-60456795 | None:intergenic | 40.0% |
| ! | ACCTTCACTTTGAGAAGCAA+AGG | - | chr1.4:60456872-60456891 | None:intergenic | 40.0% |
| ! | CAGGTGATTTTGCATATGGT+TGG | + | chr1.4:60457916-60457935 | MS.gene51452:CDS | 40.0% |
| ! | GTGATGATGAGAACAGTTTG+TGG | + | chr1.4:60456558-60456577 | MS.gene51452:CDS | 40.0% |
| ! | TCACACTTTTCAGCTTATGG+TGG | + | chr1.4:60456775-60456794 | MS.gene51452:CDS | 40.0% |
| ! | TCCTCACACTTTTCAGCTTA+TGG | + | chr1.4:60456772-60456791 | MS.gene51452:CDS | 40.0% |
| ! | TCTGAAATGAGTTTCTTGCC+TGG | - | chr1.4:60457558-60457577 | None:intergenic | 40.0% |
| ! | TGGTTGGTACCATATACTCA+CGG | + | chr1.4:60458773-60458792 | MS.gene51452:CDS | 40.0% |
| ! | TTATAAGGGCTTGGGTTTTG+TGG | + | chr1.4:60457837-60457856 | MS.gene51452:CDS | 40.0% |
| !! | AGAAGAAGTGTCATGCTTTG+AGG | - | chr1.4:60458803-60458822 | None:intergenic | 40.0% |
| !! | CCTTTGGAGATAAGGTCTTT+TGG | + | chr1.4:60457763-60457782 | MS.gene51452:CDS | 40.0% |
| !! | CTTGCATCAAAACCGGTTTT+CGG | - | chr1.4:60459252-60459271 | None:intergenic | 40.0% |
| !! | CTTTAAGATTCTCACTGCCT+TGG | + | chr1.4:60456808-60456827 | MS.gene51452:CDS | 40.0% |
| !! | GGATGATGGAAGATTTCCTT+TGG | + | chr1.4:60457747-60457766 | MS.gene51452:CDS | 40.0% |
| !! | TCAGGCTTGTTATGCCATAT+TGG | + | chr1.4:60457339-60457358 | MS.gene51452:CDS | 40.0% |
| AAAGACATGGGATCTTGGAC+GGG | + | chr1.4:60456913-60456932 | MS.gene51452:CDS | 45.0% | |
| ACATCACCACTAGATGAGCT+TGG | - | chr1.4:60458048-60458067 | None:intergenic | 45.0% | |
| ACCATGTTATGGGTGATGAG+AGG | + | chr1.4:60457884-60457903 | MS.gene51452:CDS | 45.0% | |
| ACCTAGATCTTGGAGCAATC+AGG | + | chr1.4:60457384-60457403 | MS.gene51452:CDS | 45.0% | |
| ATGAAAAAGGATGGGCAACC+TGG | + | chr1.4:60458019-60458038 | MS.gene51452:CDS | 45.0% | |
| ATGTTATGGGTGATGAGAGG+AGG | + | chr1.4:60457887-60457906 | MS.gene51452:CDS | 45.0% | |
| CAACAGGTCCAATGACAGTA+AGG | - | chr1.4:60459024-60459043 | None:intergenic | 45.0% | |
| CTCAAGAGGGATTGAGAAGT+AGG | - | chr1.4:60456639-60456658 | None:intergenic | 45.0% | |
| CTCGAACGTCCCTTTCAAAT+GGG | + | chr1.4:60456679-60456698 | MS.gene51452:CDS | 45.0% | |
| CTGCCGAAACTCGAAATACT+AGG | - | chr1.4:60457978-60457997 | None:intergenic | 45.0% | |
| CTTACTGTCATTGGACCTGT+TGG | + | chr1.4:60459022-60459041 | MS.gene51452:CDS | 45.0% | |
| GAGATGGCTATTGCAATGGA+AGG | - | chr1.4:60458842-60458861 | None:intergenic | 45.0% | |
| GCATATGGTTGGGAATCTAC+TGG | + | chr1.4:60457927-60457946 | MS.gene51452:CDS | 45.0% | |
| GCATTCAAATCCCGTAGAAG+CGG | - | chr1.4:60459002-60459021 | None:intergenic | 45.0% | |
| GCTCCAAGATCTAGGTTCTT+CGG | - | chr1.4:60457380-60457399 | None:intergenic | 45.0% | |
| GCTTCTCAAAGTGAAGGTCA+GGG | + | chr1.4:60456874-60456893 | MS.gene51452:CDS | 45.0% | |
| GGAGCTGGAGATAATTAAGG+TGG | + | chr1.4:60457405-60457424 | MS.gene51452:CDS | 45.0% | |
| GTCACTAGAAACACCAAGAC+TGG | - | chr1.4:60457245-60457264 | None:intergenic | 45.0% | |
| TAACAAGCCTGAGTTAGCTC+AGG | - | chr1.4:60457331-60457350 | None:intergenic | 45.0% | |
| TCATGAGTGATGGTATGAGG+AGG | + | chr1.4:60457581-60457600 | MS.gene51452:CDS | 45.0% | |
| TCCTCTCATCACCCATAACA+TGG | - | chr1.4:60457888-60457907 | None:intergenic | 45.0% | |
| TCCTGATTGCTCCAAGATCT+AGG | - | chr1.4:60457388-60457407 | None:intergenic | 45.0% | |
| TCTGCCCTCATATCTATCAC+TGG | - | chr1.4:60458157-60458176 | None:intergenic | 45.0% | |
| TGCTTCTCAAAGTGAAGGTC+AGG | + | chr1.4:60456873-60456892 | MS.gene51452:CDS | 45.0% | |
| TGGATTGTAACCATGGGGAA+GGG | + | chr1.4:60457947-60457966 | MS.gene51452:CDS | 45.0% | |
| TGTTATGGGTGATGAGAGGA+GGG | + | chr1.4:60457888-60457907 | MS.gene51452:CDS | 45.0% | |
| TTCTTCTGCACTTGCAGTCA+AGG | - | chr1.4:60459185-60459204 | None:intergenic | 45.0% | |
| ! | AGGCCTATGCACTCGATTTT+GGG | + | chr1.4:60457601-60457620 | MS.gene51452:CDS | 45.0% |
| ! | GCACGCTGCTTCTTTTATCA+TGG | - | chr1.4:60457797-60457816 | None:intergenic | 45.0% |
| ! | TGATGAGAGGAGGGTTTTTC+AGG | + | chr1.4:60457897-60457916 | MS.gene51452:CDS | 45.0% |
| !! | CGAAAACCGGTTTTGATGCA+AGG | + | chr1.4:60459250-60459269 | MS.gene51452:CDS | 45.0% |
| AATAGCCATCTCTGAACCCG+GGG | + | chr1.4:60458850-60458869 | MS.gene51452:CDS | 50.0% | |
| ACTAGATGAGCTTGGTCTCC+AGG | - | chr1.4:60458040-60458059 | None:intergenic | 50.0% | |
| ACTGGTATATGTCCTACCCC+CGG | - | chr1.4:60458139-60458158 | None:intergenic | 50.0% | |
| AGGAACACCTGAGCTAACTC+AGG | + | chr1.4:60457321-60457340 | MS.gene51452:CDS | 50.0% | |
| ATCCTTTGCAGAGCTGTCCA+TGG | - | chr1.4:60457731-60457750 | None:intergenic | 50.0% | |
| ATCTTGGAGCAATCAGGAGC+TGG | + | chr1.4:60457390-60457409 | MS.gene51452:CDS | 50.0% | |
| ATTGTAACCATGGGGAAGGG+GGG | + | chr1.4:60457950-60457969 | MS.gene51452:CDS | 50.0% | |
| CAAGATCTAGGTTCTTCGGC+CGG | - | chr1.4:60457376-60457395 | None:intergenic | 50.0% | |
| CAATAGCCATCTCTGAACCC+GGG | + | chr1.4:60458849-60458868 | MS.gene51452:CDS | 50.0% | |
| CTGGATTGTAACCATGGGGA+AGG | + | chr1.4:60457946-60457965 | MS.gene51452:CDS | 50.0% | |
| GAATGCTATGATGGCAAGCC+AGG | + | chr1.4:60457537-60457556 | MS.gene51452:CDS | 50.0% | |
| GACAGCTCTGCAAAGGATGA+TGG | + | chr1.4:60457733-60457752 | MS.gene51452:CDS | 50.0% | |
| GAGAGGTCTGCAAGTTCTGT+TGG | + | chr1.4:60458907-60458926 | MS.gene51452:CDS | 50.0% | |
| GATTGTAACCATGGGGAAGG+GGG | + | chr1.4:60457949-60457968 | MS.gene51452:CDS | 50.0% | |
| GCAATAGCCATCTCTGAACC+CGG | + | chr1.4:60458848-60458867 | MS.gene51452:CDS | 50.0% | |
| GCTCGAACGTCCCTTTCAAA+TGG | + | chr1.4:60456678-60456697 | MS.gene51452:CDS | 50.0% | |
| GGATTGTAACCATGGGGAAG+GGG | + | chr1.4:60457948-60457967 | MS.gene51452:CDS | 50.0% | |
| GGCGAGAAGGAATGCTATGA+TGG | + | chr1.4:60457528-60457547 | MS.gene51452:CDS | 50.0% | |
| TGGAGACCAAGCTCATCTAG+TGG | + | chr1.4:60458039-60458058 | MS.gene51452:CDS | 50.0% | |
| TTCCGTGACTTCCGCTTCTA+CGG | + | chr1.4:60458988-60459007 | MS.gene51452:CDS | 50.0% | |
| ! | GAGGCCTATGCACTCGATTT+TGG | + | chr1.4:60457600-60457619 | MS.gene51452:CDS | 50.0% |
| !! | CTTGGTGTTTCTAGTGACGC+AGG | + | chr1.4:60457247-60457266 | MS.gene51452:CDS | 50.0% |
| !! | GTTGCGTTCTGAAGATTCCC+CGG | - | chr1.4:60458870-60458889 | None:intergenic | 50.0% |
| !! | TGTTTCTAGTGACGCAGGAC+CGG | + | chr1.4:60457252-60457271 | MS.gene51452:CDS | 50.0% |
| !! | TTGCGTTCTGAAGATTCCCC+GGG | - | chr1.4:60458869-60458888 | None:intergenic | 50.0% |
| AGATTCCCCGGGTTCAGAGA+TGG | - | chr1.4:60458858-60458877 | None:intergenic | 55.0% | |
| ATGGATTCGAAGTCGCCGCA+AGG | + | chr1.4:60459119-60459138 | MS.gene51452:CDS | 55.0% | |
| CGCAGTTGCACAAGACACCA+AGG | - | chr1.4:60456828-60456847 | None:intergenic | 55.0% | |
| CGGCCGAAGAACCTAGATCT+TGG | + | chr1.4:60457374-60457393 | MS.gene51452:CDS | 55.0% | |
| CTGGTATATGTCCTACCCCC+GGG | - | chr1.4:60458138-60458157 | None:intergenic | 55.0% | |
| GAGCTTTGCAACTGGCGAGA+AGG | + | chr1.4:60457515-60457534 | MS.gene51452:CDS | 55.0% | |
| GCGCAATCGAGCTTTGCAAC+TGG | + | chr1.4:60457507-60457526 | MS.gene51452:CDS | 55.0% | |
| GGCATTCGAATGGCAGCAAC+CGG | - | chr1.4:60457274-60457293 | None:intergenic | 55.0% | |
| TCCCGTAGAAGCGGAAGTCA+CGG | - | chr1.4:60458993-60459012 | None:intergenic | 55.0% | |
| TCCGTGACTTCCGCTTCTAC+GGG | + | chr1.4:60458989-60459008 | MS.gene51452:CDS | 55.0% | |
| TCGAAGTCGCCGCAAGGATT+CGG | + | chr1.4:60459125-60459144 | MS.gene51452:CDS | 55.0% | |
| TGCAGCATGCGATAGAGCCA+CGG | - | chr1.4:60457446-60457465 | None:intergenic | 55.0% | |
| TGCCATGGACAGCTCTGCAA+AGG | + | chr1.4:60457726-60457745 | MS.gene51452:CDS | 55.0% | |
| !! | GCGCTTGCTGTTTCCAGTCT+TGG | + | chr1.4:60457229-60457248 | MS.gene51452:CDS | 55.0% |
| !! | GGGCTTGGGTTTTGTGGTTG+AGG | + | chr1.4:60457843-60457862 | MS.gene51452:CDS | 55.0% |
| !! | TTTCGAGTTTCGGCAGACGC+TGG | + | chr1.4:60457982-60458001 | MS.gene51452:CDS | 55.0% |
| AGCTCAGTGTCCTCAGGTCC+CGG | + | chr1.4:60458117-60458136 | MS.gene51452:CDS | 60.0% | |
| CAGACGCTGGAAGTCAAGGG+AGG | + | chr1.4:60457995-60458014 | MS.gene51452:CDS | 60.0% | |
| CGGCAGACGCTGGAAGTCAA+GGG | + | chr1.4:60457992-60458011 | MS.gene51452:CDS | 60.0% | |
| GACATGGGATCTTGGACGGG+AGG | + | chr1.4:60456916-60456935 | MS.gene51452:CDS | 60.0% | |
| GTTGGCAGCTCAGTGTCCTC+AGG | + | chr1.4:60458111-60458130 | MS.gene51452:CDS | 60.0% | |
| TCGGCAGACGCTGGAAGTCA+AGG | + | chr1.4:60457991-60458010 | MS.gene51452:CDS | 60.0% | |
| TGGGATCTTGGACGGGAGGT+TGG | + | chr1.4:60456920-60456939 | MS.gene51452:CDS | 60.0% | |
| ! | GGTTGCTGATCAGGTTGCCG+TGG | + | chr1.4:60457426-60457445 | MS.gene51452:CDS | 60.0% |
| CTAGGATCCCCCCTTCCCCA+TGG | - | chr1.4:60457960-60457979 | None:intergenic | 65.0% | |
| CTCAGTGTCCTCAGGTCCCG+GGG | + | chr1.4:60458119-60458138 | MS.gene51452:CDS | 65.0% | |
| GCTCAGTGTCCTCAGGTCCC+GGG | + | chr1.4:60458118-60458137 | MS.gene51452:CDS | 65.0% | |
| TCAGTGTCCTCAGGTCCCGG+GGG | + | chr1.4:60458120-60458139 | MS.gene51452:CDS | 65.0% | |
| TGTCCTACCCCCGGGACCTG+AGG | - | chr1.4:60458130-60458149 | None:intergenic | 70.0% | |
| TGTCCTCAGGTCCCGGGGGT+AGG | + | chr1.4:60458124-60458143 | MS.gene51452:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 60456467 | 60459318 | 60456467 | ID=MS.gene51452 |
| chr1.4 | mRNA | 60456467 | 60459318 | 60456467 | ID=MS.gene51452.t1;Parent=MS.gene51452 |
| chr1.4 | exon | 60456467 | 60458209 | 60456467 | ID=MS.gene51452.t1.exon1;Parent=MS.gene51452.t1 |
| chr1.4 | CDS | 60456467 | 60458209 | 60456467 | ID=cds.MS.gene51452.t1;Parent=MS.gene51452.t1 |
| chr1.4 | exon | 60458755 | 60459318 | 60458755 | ID=MS.gene51452.t1.exon2;Parent=MS.gene51452.t1 |
| chr1.4 | CDS | 60458755 | 60459318 | 60458755 | ID=cds.MS.gene51452.t1;Parent=MS.gene51452.t1 |
| Gene Sequence |
| Protein sequence |
