Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene02630.t1 | XP_013461355.1 | 96.9 | 422 | 13 | 0 | 1 | 422 | 1 | 422 | 1.20E-235 | 825.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene02630.t1 | O49285 | 74.3 | 424 | 105 | 3 | 1 | 422 | 1 | 422 | 2.5e-181 | 636.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene02630.t1 | A0A072VB68 | 96.9 | 422 | 13 | 0 | 1 | 422 | 1 | 422 | 8.6e-236 | 825.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene015275 | MS.gene02630 | PPI |
| MS.gene011698 | MS.gene02630 | PPI |
| MS.gene44446 | MS.gene02630 | PPI |
| MS.gene20314 | MS.gene02630 | PPI |
| MS.gene60184 | MS.gene02630 | PPI |
| MS.gene09616 | MS.gene02630 | PPI |
| MS.gene43525 | MS.gene02630 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene02630.t1 | MTR_3g088885 | 96.919 | 422 | 13 | 0 | 1 | 422 | 1 | 422 | 0.0 | 847 |
| MS.gene02630.t1 | MTR_1g029520 | 82.134 | 403 | 65 | 5 | 25 | 421 | 254 | 655 | 0.0 | 666 |
| MS.gene02630.t1 | MTR_5g047260 | 55.422 | 415 | 172 | 5 | 8 | 421 | 16 | 418 | 4.13e-155 | 447 |
| MS.gene02630.t1 | MTR_7g022470 | 55.012 | 409 | 172 | 5 | 9 | 414 | 10 | 409 | 9.55e-155 | 446 |
| MS.gene02630.t1 | MTR_7g028050 | 50.980 | 408 | 191 | 5 | 9 | 414 | 1 | 401 | 2.08e-139 | 407 |
| MS.gene02630.t1 | MTR_4g101950 | 49.161 | 417 | 191 | 6 | 6 | 421 | 3 | 399 | 1.48e-132 | 389 |
| MS.gene02630.t1 | MTR_5g011580 | 47.017 | 419 | 201 | 6 | 6 | 423 | 3 | 401 | 6.04e-128 | 377 |
| MS.gene02630.t1 | MTR_5g015170 | 46.083 | 434 | 211 | 9 | 1 | 415 | 1 | 430 | 3.46e-127 | 377 |
| MS.gene02630.t1 | MTR_5g047260 | 52.661 | 357 | 156 | 5 | 8 | 363 | 16 | 360 | 3.51e-122 | 360 |
| MS.gene02630.t1 | MTR_4g097380 | 42.280 | 421 | 228 | 6 | 7 | 415 | 26 | 443 | 6.47e-115 | 346 |
| MS.gene02630.t1 | MTR_5g047260 | 53.770 | 305 | 129 | 4 | 8 | 311 | 16 | 309 | 1.13e-104 | 313 |
| MS.gene02630.t1 | MTR_7g028050 | 52.189 | 297 | 137 | 4 | 120 | 414 | 5 | 298 | 1.73e-98 | 298 |
| MS.gene02630.t1 | MTR_1g012740 | 50.000 | 100 | 44 | 1 | 278 | 377 | 54 | 147 | 3.21e-24 | 99.0 |
| MS.gene02630.t1 | MTR_1g012740 | 31.333 | 150 | 75 | 5 | 6 | 149 | 7 | 134 | 5.75e-13 | 67.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene02630.t1 | AT1G76990 | 73.427 | 429 | 110 | 3 | 1 | 427 | 1 | 427 | 0.0 | 652 |
| MS.gene02630.t1 | AT1G76990 | 73.427 | 429 | 110 | 3 | 1 | 427 | 1 | 427 | 0.0 | 652 |
| MS.gene02630.t1 | AT1G76990 | 73.427 | 429 | 110 | 3 | 1 | 427 | 1 | 427 | 0.0 | 652 |
| MS.gene02630.t1 | AT1G76990 | 73.427 | 429 | 110 | 3 | 1 | 427 | 1 | 427 | 0.0 | 652 |
| MS.gene02630.t1 | AT1G76990 | 73.427 | 429 | 110 | 3 | 1 | 427 | 1 | 427 | 0.0 | 652 |
| MS.gene02630.t1 | AT1G69040 | 53.865 | 414 | 182 | 4 | 9 | 421 | 7 | 412 | 1.09e-146 | 426 |
| MS.gene02630.t1 | AT1G69040 | 53.865 | 414 | 182 | 4 | 9 | 421 | 11 | 416 | 1.31e-146 | 426 |
| MS.gene02630.t1 | AT5G25320 | 47.903 | 453 | 204 | 9 | 1 | 422 | 1 | 452 | 3.77e-144 | 421 |
| MS.gene02630.t1 | AT2G03730 | 51.306 | 421 | 190 | 5 | 4 | 414 | 3 | 418 | 4.82e-143 | 416 |
| MS.gene02630.t1 | AT2G03730 | 51.306 | 421 | 190 | 5 | 4 | 414 | 3 | 418 | 4.82e-143 | 416 |
| MS.gene02630.t1 | AT3G01990 | 51.724 | 406 | 176 | 8 | 10 | 410 | 17 | 407 | 5.43e-136 | 398 |
| MS.gene02630.t1 | AT3G01990 | 51.724 | 406 | 176 | 8 | 10 | 410 | 17 | 407 | 5.43e-136 | 398 |
| MS.gene02630.t1 | AT3G01990 | 51.724 | 406 | 176 | 8 | 10 | 410 | 17 | 407 | 8.86e-136 | 397 |
| MS.gene02630.t1 | AT3G01990 | 51.724 | 406 | 176 | 8 | 10 | 410 | 3 | 393 | 1.13e-135 | 397 |
| MS.gene02630.t1 | AT3G01990 | 51.724 | 406 | 176 | 8 | 10 | 410 | 3 | 393 | 1.13e-135 | 397 |
| MS.gene02630.t1 | AT3G01990 | 51.724 | 406 | 176 | 8 | 10 | 410 | 3 | 393 | 1.54e-135 | 396 |
| MS.gene02630.t1 | AT5G25320 | 47.585 | 414 | 187 | 7 | 38 | 422 | 1 | 413 | 6.09e-128 | 378 |
| MS.gene02630.t1 | AT1G12420 | 47.962 | 417 | 197 | 8 | 8 | 423 | 6 | 403 | 1.82e-121 | 361 |
| MS.gene02630.t1 | AT4G22780 | 48.507 | 402 | 183 | 7 | 12 | 410 | 9 | 389 | 6.52e-121 | 360 |
| MS.gene02630.t1 | AT4G22780 | 48.507 | 402 | 183 | 7 | 12 | 410 | 9 | 389 | 6.52e-121 | 360 |
| MS.gene02630.t1 | AT5G65890 | 42.691 | 431 | 228 | 6 | 7 | 420 | 8 | 436 | 4.83e-111 | 335 |
| MS.gene02630.t1 | AT5G65890 | 42.691 | 431 | 228 | 6 | 7 | 420 | 8 | 436 | 4.83e-111 | 335 |
| MS.gene02630.t1 | AT5G25320 | 46.113 | 373 | 170 | 8 | 1 | 342 | 1 | 373 | 1.34e-108 | 326 |
| MS.gene02630.t1 | AT3G01990 | 50.437 | 343 | 150 | 8 | 10 | 347 | 17 | 344 | 8.09e-107 | 320 |
| MS.gene02630.t1 | AT3G01990 | 50.437 | 343 | 150 | 8 | 10 | 347 | 3 | 330 | 1.46e-106 | 319 |
| MS.gene02630.t1 | AT3G01990 | 50.888 | 338 | 146 | 8 | 10 | 342 | 17 | 339 | 1.69e-106 | 319 |
| MS.gene02630.t1 | AT1G12420 | 46.418 | 349 | 168 | 7 | 76 | 423 | 1 | 331 | 1.62e-93 | 287 |
| MS.gene02630.t1 | AT5G65890 | 40.674 | 386 | 210 | 6 | 52 | 420 | 1 | 384 | 1.88e-91 | 283 |
| MS.gene02630.t1 | AT5G65890 | 40.674 | 386 | 210 | 6 | 52 | 420 | 1 | 384 | 1.88e-91 | 283 |
| MS.gene02630.t1 | AT3G01990 | 48.896 | 317 | 142 | 8 | 10 | 321 | 3 | 304 | 1.29e-87 | 270 |
| MS.gene02630.t1 | AT3G01990 | 48.896 | 317 | 142 | 8 | 10 | 321 | 17 | 318 | 1.38e-87 | 270 |
| MS.gene02630.t1 | AT5G65890 | 39.103 | 312 | 174 | 5 | 123 | 420 | 13 | 322 | 2.49e-69 | 224 |
Find 106 sgRNAs with CRISPR-Local
Find 310 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTTCACTTCTTCTTTGTTC+TGG | 0.217028 | 3.3:-74910408 | None:intergenic |
| CCAAATGTTGTTTGCTGATC+GGG | 0.257041 | 3.3:+74910768 | MS.gene02630:CDS |
| CACTTATTGCATACAGTACT+TGG | 0.259416 | 3.3:+74911924 | MS.gene02630:CDS |
| ACCTTTAGGAATACTTTATT+CGG | 0.293495 | 3.3:+74911416 | MS.gene02630:intron |
| GGTGGAGCCGCCTATCAATA+TGG | 0.298908 | 3.3:-74910747 | None:intergenic |
| GGGAATGTCCTCCCTCTTTC+CGG | 0.308334 | 3.3:+74910824 | MS.gene02630:CDS |
| ATTGGTCAGGCAAATGGGTT+GGG | 0.336152 | 3.3:+74910431 | MS.gene02630:CDS |
| CAGCTACAACCACGTTAAAA+TGG | 0.336988 | 3.3:-74910546 | None:intergenic |
| TCATACTCAGGATCAAAATA+TGG | 0.343119 | 3.3:-74907449 | None:intergenic |
| ATAGAATGTTGTGAGGAAAA+AGG | 0.357579 | 3.3:+74910859 | MS.gene02630:CDS |
| ACCACTTCCAGTAGAATTCC+AGG | 0.366064 | 3.3:-74909211 | None:intergenic |
| CATATAGCAATTGAGCTAAT+CGG | 0.371261 | 3.3:+74910472 | MS.gene02630:CDS |
| CCCGATCAGCAAACAACATT+TGG | 0.373612 | 3.3:-74910768 | None:intergenic |
| ACAAAGAAGAAGTGAAGAAT+TGG | 0.384276 | 3.3:+74910413 | MS.gene02630:CDS |
| TTGTACCATCATTGACATAA+AGG | 0.411329 | 3.3:-74910603 | None:intergenic |
| CTGAAGTGTGGACTCATAAC+AGG | 0.416112 | 3.3:+74910566 | MS.gene02630:CDS |
| ATCAGAAGATATGTAAGCTT+TGG | 0.416198 | 3.3:-74909266 | None:intergenic |
| TGAGTTTCACCCATATTGAT+AGG | 0.418165 | 3.3:+74910737 | MS.gene02630:CDS |
| TGAAGAATTGGTCAGGCAAA+TGG | 0.419920 | 3.3:+74910425 | MS.gene02630:CDS |
| CCTTGATTAGTGTACAGTTA+TGG | 0.426480 | 3.3:-74908254 | None:intergenic |
| TTCTGATGGAGGATGGTTCA+TGG | 0.433562 | 3.3:+74909282 | MS.gene02630:CDS |
| TTCTATGTGAGGGATGCATC+AGG | 0.435247 | 3.3:+74911793 | MS.gene02630:CDS |
| TTGCTGAAATTCTCATACTC+AGG | 0.439597 | 3.3:-74907461 | None:intergenic |
| GAAGCACTTCGTAAAGAAAT+CGG | 0.445977 | 3.3:+74911841 | MS.gene02630:CDS |
| TTAGAATGGCTGCAGTTTGT+TGG | 0.449593 | 3.3:+74907426 | None:intergenic |
| GGTGAAACTCATGGACAAAC+TGG | 0.453115 | 3.3:-74910725 | None:intergenic |
| AACCATAGATCTCATTGAAA+AGG | 0.459867 | 3.3:+74910176 | MS.gene02630:CDS |
| GATCGGGATTATGAAAGTTA+TGG | 0.463149 | 3.3:+74910784 | MS.gene02630:CDS |
| ATTAAGAGCTTGTTCCCCTC+TGG | 0.467903 | 3.3:-74911767 | None:intergenic |
| AGAATGGCCTAACAGTTTGT+AGG | 0.468609 | 3.3:+74911731 | MS.gene02630:CDS |
| ATACAGAAGGGGAGAAAGAA+AGG | 0.470876 | 3.3:+74911461 | MS.gene02630:CDS |
| GGCCTAACAGTTTGTAGGGC+AGG | 0.474532 | 3.3:+74911736 | MS.gene02630:CDS |
| ACCAAATGTTGTTTGCTGAT+CGG | 0.476294 | 3.3:+74910767 | MS.gene02630:CDS |
| ATATAGCAATTGAGCTAATC+GGG | 0.478241 | 3.3:+74910473 | MS.gene02630:CDS |
| TAACAAACCTGGAATTCTAC+TGG | 0.480298 | 3.3:+74909204 | MS.gene02630:CDS |
| ATCAATATGGGTGAAACTCA+TGG | 0.480529 | 3.3:-74910734 | None:intergenic |
| GAAGAAGTGAAGAATTGGTC+AGG | 0.491176 | 3.3:+74910418 | MS.gene02630:CDS |
| AATTGGTCAGGCAAATGGGT+TGG | 0.499259 | 3.3:+74910430 | MS.gene02630:CDS |
| ACAAGAATTCTGAGAGAGAA+TGG | 0.499775 | 3.3:+74911715 | MS.gene02630:CDS |
| TGGGTTGGGGTGCATTCTGT+TGG | 0.500255 | 3.3:+74910445 | MS.gene02630:CDS |
| CCATAACTGTACACTAATCA+AGG | 0.500495 | 3.3:+74908254 | MS.gene02630:CDS |
| TACTTTATTCGGCACATGGA+CGG | 0.504584 | 3.3:+74911427 | MS.gene02630:CDS |
| ATGGAGAGAAAGTTGCTAGT+AGG | 0.510505 | 3.3:+74910701 | MS.gene02630:CDS |
| TGATGTACCTGCGATGCATA+AGG | 0.510772 | 3.3:-74910997 | None:intergenic |
| ATCCGATGAGATTGTGGCAT+GGG | 0.515862 | 3.3:-74910971 | None:intergenic |
| GAAGAATTGGTCAGGCAAAT+GGG | 0.517093 | 3.3:+74910426 | MS.gene02630:CDS |
| ACCTGGAATTCTACTGGAAG+TGG | 0.521746 | 3.3:+74909210 | MS.gene02630:CDS |
| CGTTAAAATGGAGGCTGGCA+AGG | 0.523869 | 3.3:-74910534 | None:intergenic |
| TGTGTCCTTTATGTCAATGA+TGG | 0.524064 | 3.3:+74910598 | MS.gene02630:CDS |
| GTGGAGCCGCCTATCAATAT+GGG | 0.526124 | 3.3:-74910746 | None:intergenic |
| AGTTGATTCATTCTAACAGT+TGG | 0.527919 | 3.3:-74911895 | None:intergenic |
| TATCCTTTGCACACAACTCT+AGG | 0.530398 | 3.3:-74911669 | None:intergenic |
| TTTGATAGTGTTAACAAACC+TGG | 0.530560 | 3.3:+74909193 | MS.gene02630:CDS |
| AAGATTAAGGTAAACCTTGG+AGG | 0.533637 | 3.3:-74907494 | None:intergenic |
| GATCAGCAAACAACATTTGG+TGG | 0.537075 | 3.3:-74910765 | None:intergenic |
| ATGGAGTAACGACAACAGAC+AGG | 0.537588 | 3.3:+74910803 | MS.gene02630:CDS |
| AAAGCTTACATATCTTCTGA+TGG | 0.539350 | 3.3:+74909268 | MS.gene02630:CDS |
| GTTGTGTGCAAAGGATAGAG+TGG | 0.544908 | 3.3:+74911675 | MS.gene02630:CDS |
| ACATATCTTCTGATGGAGGA+TGG | 0.557362 | 3.3:+74909275 | MS.gene02630:CDS |
| GAATGGCCTAACAGTTTGTA+GGG | 0.559276 | 3.3:+74911732 | MS.gene02630:CDS |
| TTGTGTGCAAAGGATAGAGT+GGG | 0.560363 | 3.3:+74911676 | MS.gene02630:CDS |
| GATATCTCAGACAAGAGACC+AGG | 0.560821 | 3.3:-74910505 | None:intergenic |
| ACTTATTGCATACAGTACTT+GGG | 0.561986 | 3.3:+74911925 | MS.gene02630:CDS |
| TTGGTCAGGCAAATGGGTTG+GGG | 0.568849 | 3.3:+74910432 | MS.gene02630:CDS |
| CTCTTAATGTCTTCTATGTG+AGG | 0.569159 | 3.3:+74911782 | MS.gene02630:CDS |
| AGAAATCGGTAAGACAATGA+TGG | 0.575183 | 3.3:+74911855 | MS.gene02630:CDS |
| GCAACAAAATCAACCCTCCA+AGG | 0.576070 | 3.3:+74907480 | MS.gene02630:CDS |
| GGAATACTTTATTCGGCACA+TGG | 0.576960 | 3.3:+74911423 | MS.gene02630:intron |
| GGATGCACACTTGATACAGA+AGG | 0.577234 | 3.3:+74911448 | MS.gene02630:CDS |
| AATGATGGTAGATGTGAAGA+AGG | 0.579827 | 3.3:+74911870 | MS.gene02630:CDS |
| AACCACGTTAAAATGGAGGC+TGG | 0.580495 | 3.3:-74910539 | None:intergenic |
| CTTTGGTGATTATGAAGTCA+AGG | 0.580969 | 3.3:-74909249 | None:intergenic |
| AGATTAAGGTAAACCTTGGA+GGG | 0.581667 | 3.3:-74907493 | None:intergenic |
| TTCCCATGCCACAATCTCAT+CGG | 0.582164 | 3.3:+74910969 | MS.gene02630:CDS |
| AGGGCGATCCGATGAGATTG+TGG | 0.584876 | 3.3:-74910977 | None:intergenic |
| GGATCGCCCTTATGCATCGC+AGG | 0.593884 | 3.3:+74910990 | MS.gene02630:CDS |
| TGATGGTACAAGACAAGCCG+TGG | 0.600705 | 3.3:+74910615 | MS.gene02630:CDS |
| TACCTGCCCTACAAACTGTT+AGG | 0.606101 | 3.3:-74911738 | None:intergenic |
| ATATACAGTATTTCATGTCA+CGG | 0.612062 | 3.3:+74910122 | MS.gene02630:intron |
| TCTTAATGTCTTCTATGTGA+GGG | 0.617321 | 3.3:+74911783 | MS.gene02630:CDS |
| GGGCAGGTATATCAACCAGA+GGG | 0.617488 | 3.3:+74911752 | MS.gene02630:CDS |
| GATGTACCTGCGATGCATAA+GGG | 0.618291 | 3.3:-74910996 | None:intergenic |
| GCTTACATATCTTCTGATGG+AGG | 0.624587 | 3.3:+74909271 | MS.gene02630:CDS |
| TTTCATGTCACGGATCAACA+AGG | 0.626341 | 3.3:+74910132 | MS.gene02630:CDS |
| TACAGAAGGGGAGAAAGAAA+GGG | 0.629110 | 3.3:+74911462 | MS.gene02630:CDS |
| CTAATCGGGAGAGACCGCCC+TGG | 0.632484 | 3.3:+74910487 | MS.gene02630:CDS |
| GATGCACACTTGATACAGAA+GGG | 0.635196 | 3.3:+74911449 | MS.gene02630:CDS |
| TGTACTTTGCAGGGTCTCCG+TGG | 0.635916 | 3.3:+74908218 | MS.gene02630:intron |
| TCTATGTGAGGGATGCATCA+GGG | 0.636872 | 3.3:+74911794 | MS.gene02630:CDS |
| ACGTGGTTGTAGCTGAAGTG+TGG | 0.647683 | 3.3:+74910554 | MS.gene02630:CDS |
| GATCCGATGAGATTGTGGCA+TGG | 0.649683 | 3.3:-74910972 | None:intergenic |
| GATGGAGGATGGTTCATGGA+TGG | 0.659799 | 3.3:+74909286 | MS.gene02630:CDS |
| CTACAACCACGTTAAAATGG+AGG | 0.661407 | 3.3:-74910543 | None:intergenic |
| TTCATGTCACGGATCAACAA+GGG | 0.666664 | 3.3:+74910133 | MS.gene02630:CDS |
| AATTACCATAGAATGTTGTG+AGG | 0.670161 | 3.3:+74910852 | MS.gene02630:CDS |
| ATGCACACTTGATACAGAAG+GGG | 0.670406 | 3.3:+74911450 | MS.gene02630:CDS |
| ATGGCAACTAGCATTGTCCA+CGG | 0.673612 | 3.3:-74908235 | None:intergenic |
| TATTCAAAGAAGAGTAAGCG+AGG | 0.682011 | 3.3:+74911507 | MS.gene02630:CDS |
| GTTTCACCCATATTGATAGG+CGG | 0.683397 | 3.3:+74910740 | MS.gene02630:CDS |
| TGGAGTAACGACAACAGACA+GGG | 0.688299 | 3.3:+74910804 | MS.gene02630:CDS |
| ATATCTCAGACAAGAGACCA+GGG | 0.700312 | 3.3:-74910504 | None:intergenic |
| GGATGCATCAGGGAACTCAG+TGG | 0.701774 | 3.3:+74911804 | MS.gene02630:CDS |
| GAGCCTAGAGTTGTGTGCAA+AGG | 0.708129 | 3.3:+74911666 | MS.gene02630:CDS |
| AGGGCAGGTATATCAACCAG+AGG | 0.716826 | 3.3:+74911751 | MS.gene02630:CDS |
| GGCAGGTATATCAACCAGAG+GGG | 0.745288 | 3.3:+74911753 | MS.gene02630:CDS |
| TCTCAGACAAGAGACCAGGG+CGG | 0.828951 | 3.3:-74910501 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAATATAAAATACTTTTGTA+AGG | + | chr3.3:74907638-74907657 | MS.gene02630:intron | 10.0% |
| !!! | AATTAAAACTGAAAAATTTT+CGG | - | chr3.3:74908694-74908713 | None:intergenic | 10.0% |
| !!! | AATTGAATATAATTTGTAAA+AGG | - | chr3.3:74909011-74909030 | None:intergenic | 10.0% |
| !!! | ATGTATAAATAAATTTTTCA+AGG | + | chr3.3:74910330-74910349 | MS.gene02630:intron | 10.0% |
| !!! | GAAAAAAAAAAAAATTTTGA+AGG | + | chr3.3:74908787-74908806 | MS.gene02630:intron | 10.0% |
| !!! | TGTATAAATAAATTTTTCAA+GGG | + | chr3.3:74910331-74910350 | MS.gene02630:intron | 10.0% |
| !!! | TTTTTTTTTTTTTTTTGAAC+CGG | + | chr3.3:74909766-74909785 | MS.gene02630:intron | 10.0% |
| !! | AAAAAAAAAAAAAATAAGCC+AGG | - | chr3.3:74908616-74908635 | None:intergenic | 15.0% |
| !! | AAAAAAAAAAAAATAAGCCA+GGG | - | chr3.3:74908615-74908634 | None:intergenic | 15.0% |
| !! | AAAAAATCGCAAAAAAAATT+TGG | - | chr3.3:74908669-74908688 | None:intergenic | 15.0% |
| !! | AAAAATCGCAAAAAAAATTT+GGG | - | chr3.3:74908668-74908687 | None:intergenic | 15.0% |
| !! | TAAAAAATAGAAAAACTCTA+GGG | - | chr3.3:74908409-74908428 | None:intergenic | 15.0% |
| !! | TATATTCATTTATCAAGATA+TGG | + | chr3.3:74910234-74910253 | MS.gene02630:intron | 15.0% |
| !! | TTCATAAAGAATCATTTATT+TGG | + | chr3.3:74909123-74909142 | MS.gene02630:intron | 15.0% |
| !!! | AAAACTGAATTTTTTTTTGA+AGG | - | chr3.3:74908643-74908662 | None:intergenic | 15.0% |
| !!! | AATTTATTCTTGTAACATTT+TGG | - | chr3.3:74911325-74911344 | None:intergenic | 15.0% |
| !!! | AGTTTTTCTATTTTTTACAA+AGG | + | chr3.3:74908412-74908431 | MS.gene02630:intron | 15.0% |
| !!! | ATTAAAACTGAAAAATTTTC+GGG | - | chr3.3:74908693-74908712 | None:intergenic | 15.0% |
| !!! | CTTTAAAATTTAACCAAATA+TGG | + | chr3.3:74907534-74907553 | MS.gene02630:intron | 15.0% |
| !!! | TATTCAATTTTCAAACTTAT+AGG | + | chr3.3:74909022-74909041 | MS.gene02630:intron | 15.0% |
| !!! | TTTTTTTTTTTTTTTGAACC+GGG | + | chr3.3:74909767-74909786 | MS.gene02630:intron | 15.0% |
| !! | AAAAAAAAAAAATAAGCCAG+GGG | - | chr3.3:74908614-74908633 | None:intergenic | 20.0% |
| !! | AAAAAATAGAAAAACTCTAG+GGG | - | chr3.3:74908408-74908427 | None:intergenic | 20.0% |
| !! | AAAAAATAGAAAGAAAGTTG+TGG | + | chr3.3:74909658-74909677 | MS.gene02630:intron | 20.0% |
| !! | AAAAGGAATATTACCATATT+TGG | - | chr3.3:74907550-74907569 | None:intergenic | 20.0% |
| !! | AATTATGCAATGTAAAAGTA+TGG | + | chr3.3:74909964-74909983 | MS.gene02630:intron | 20.0% |
| !! | ACTTTAACACTCTTTATTAT+TGG | + | chr3.3:74909902-74909921 | MS.gene02630:intron | 20.0% |
| !! | AGTCTTAGTATTAAATTCTA+CGG | + | chr3.3:74911625-74911644 | MS.gene02630:intron | 20.0% |
| !! | ATACATCAATTTCTCATAAA+TGG | - | chr3.3:74907717-74907736 | None:intergenic | 20.0% |
| !! | CTCTTGACTATTATTAATAA+CGG | - | chr3.3:74909430-74909449 | None:intergenic | 20.0% |
| !! | CTTTAACACTCTTTATTATT+GGG | + | chr3.3:74909903-74909922 | MS.gene02630:intron | 20.0% |
| !! | GAAATACTGTATATATCAAT+CGG | - | chr3.3:74910116-74910135 | None:intergenic | 20.0% |
| !! | GATTCTTTATGAAACAATAA+AGG | - | chr3.3:74909116-74909135 | None:intergenic | 20.0% |
| !! | GTAAAAAATAGAAAAACTCT+AGG | - | chr3.3:74908410-74908429 | None:intergenic | 20.0% |
| !! | TCAAAAAAGAATATCTCTTA+TGG | + | chr3.3:74910642-74910661 | MS.gene02630:CDS | 20.0% |
| !! | TTAAATACTTGTATCAAGTA+GGG | - | chr3.3:74910077-74910096 | None:intergenic | 20.0% |
| !! | TTAACTGATTAAACTTTGTA+GGG | + | chr3.3:74908907-74908926 | MS.gene02630:intron | 20.0% |
| !! | TTTAACTGATTAAACTTTGT+AGG | + | chr3.3:74908906-74908925 | MS.gene02630:intron | 20.0% |
| !!! | AAATAATTTTCAGACAAACA+AGG | - | chr3.3:74911290-74911309 | None:intergenic | 20.0% |
| !!! | AATAATTTTCAGACAAACAA+GGG | - | chr3.3:74911289-74911308 | None:intergenic | 20.0% |
| !!! | GAATTTTTTCTATAAGATAG+AGG | + | chr3.3:74911120-74911139 | MS.gene02630:intron | 20.0% |
| !!! | TTAAAACTGAAAAATTTTCG+GGG | - | chr3.3:74908692-74908711 | None:intergenic | 20.0% |
| !!! | TTAACAGTTTTTCATACAAT+AGG | + | chr3.3:74910369-74910388 | MS.gene02630:intron | 20.0% |
| !!! | TTCCTACTAATTTTGTTTAT+TGG | + | chr3.3:74911262-74911281 | MS.gene02630:intron | 20.0% |
| !!! | TTTCTATTTTTTCAAGCTTA+GGG | - | chr3.3:74909650-74909669 | None:intergenic | 20.0% |
| ! | AAAAAGAATATCTCTTATGG+AGG | + | chr3.3:74910645-74910664 | MS.gene02630:CDS | 25.0% |
| ! | ATATACAGTATTTCATGTCA+CGG | + | chr3.3:74910122-74910141 | MS.gene02630:intron | 25.0% |
| ! | ATTAGAAATATGAAGACTTG+AGG | + | chr3.3:74911367-74911386 | MS.gene02630:intron | 25.0% |
| ! | ATTCTCACTTGGATTAATTT+AGG | + | chr3.3:74911342-74911361 | MS.gene02630:intron | 25.0% |
| ! | CAAAATATTACTACACAAAG+TGG | + | chr3.3:74908054-74908073 | MS.gene02630:intron | 25.0% |
| ! | CGATGAGTAATTGAAAAAAA+CGG | + | chr3.3:74909810-74909829 | MS.gene02630:intron | 25.0% |
| ! | CGTTATTAATAATAGTCAAG+AGG | + | chr3.3:74909428-74909447 | MS.gene02630:intron | 25.0% |
| ! | CTTAAATACTTGTATCAAGT+AGG | - | chr3.3:74910078-74910097 | None:intergenic | 25.0% |
| ! | GTCCAATAAACAAAATTAGT+AGG | - | chr3.3:74911267-74911286 | None:intergenic | 25.0% |
| ! | TAACTGATTAAACTTTGTAG+GGG | + | chr3.3:74908908-74908927 | MS.gene02630:intron | 25.0% |
| ! | TACAAGAATAAATTCTCACT+TGG | + | chr3.3:74911331-74911350 | MS.gene02630:intron | 25.0% |
| ! | TATTAATAATAGTCAAGAGG+TGG | + | chr3.3:74909431-74909450 | MS.gene02630:intron | 25.0% |
| ! | TGCCTATCATAAAAATGAAA+TGG | + | chr3.3:74909841-74909860 | MS.gene02630:intron | 25.0% |
| ! | TTAACTGATTAAACTTTGCA+GGG | - | chr3.3:74908516-74908535 | None:intergenic | 25.0% |
| ! | TTAGGAGTAATGTTGTAATA+TGG | + | chr3.3:74909590-74909609 | MS.gene02630:intron | 25.0% |
| ! | TTGTATGAAAAACTGTTAAC+AGG | - | chr3.3:74910368-74910387 | None:intergenic | 25.0% |
| ! | TTTAACTGATTAAACTTTGC+AGG | - | chr3.3:74908517-74908536 | None:intergenic | 25.0% |
| !! | CAACATTCTATGGTAATTTT+CGG | - | chr3.3:74910850-74910869 | None:intergenic | 25.0% |
| !! | CACTTTGTGTAGTAATATTT+TGG | - | chr3.3:74908056-74908075 | None:intergenic | 25.0% |
| !! | GTATTAAATTCTACGGATTT+TGG | + | chr3.3:74911632-74911651 | MS.gene02630:intron | 25.0% |
| !! | TCTTTGTAGCTAATGAATTT+TGG | - | chr3.3:74909340-74909359 | None:intergenic | 25.0% |
| !!! | CAACTTGTATTTTAACACTA+AGG | - | chr3.3:74909616-74909635 | None:intergenic | 25.0% |
| !!! | CATTATTCTGTTTCTATGTA+AGG | - | chr3.3:74911184-74911203 | None:intergenic | 25.0% |
| !!! | CTTTCTATTTTTTCAAGCTT+AGG | - | chr3.3:74909651-74909670 | None:intergenic | 25.0% |
| !!! | TAATAAAGAGTGTTAAAGTG+TGG | - | chr3.3:74909901-74909920 | None:intergenic | 25.0% |
| !!! | TATTCTTTTTTGATCATCCA+CGG | - | chr3.3:74910635-74910654 | None:intergenic | 25.0% |
| !!! | TGCCATTTCATTTTTATGAT+AGG | - | chr3.3:74909846-74909865 | None:intergenic | 25.0% |
| AAAAGTTCTTTCACAAATCG+TGG | - | chr3.3:74911572-74911591 | None:intergenic | 30.0% | |
| AAACTTCATTTGTACTTTGC+AGG | + | chr3.3:74908208-74908227 | MS.gene02630:intron | 30.0% | |
| AAAGCTTACATATCTTCTGA+TGG | + | chr3.3:74909268-74909287 | MS.gene02630:CDS | 30.0% | |
| AACCATAGATCTCATTGAAA+AGG | + | chr3.3:74910176-74910195 | MS.gene02630:CDS | 30.0% | |
| AACTTCATTTGTACTTTGCA+GGG | + | chr3.3:74908209-74908228 | MS.gene02630:intron | 30.0% | |
| AAGGAAAAAAAAATTAGCCC+AGG | + | chr3.3:74908806-74908825 | MS.gene02630:intron | 30.0% | |
| AATGAAGTTTACCATCAAAG+AGG | - | chr3.3:74908198-74908217 | None:intergenic | 30.0% | |
| AATTACCATAGAATGTTGTG+AGG | + | chr3.3:74910852-74910871 | MS.gene02630:CDS | 30.0% | |
| ACAAAGAAGAAGTGAAGAAT+TGG | + | chr3.3:74910413-74910432 | MS.gene02630:CDS | 30.0% | |
| ACACAGATATACACAATGTT+TGG | - | chr3.3:74909730-74909749 | None:intergenic | 30.0% | |
| ACGTCATCAAATTAACACAA+TGG | + | chr3.3:74908568-74908587 | MS.gene02630:intron | 30.0% | |
| ACTTATTGCATACAGTACTT+GGG | + | chr3.3:74911925-74911944 | MS.gene02630:CDS | 30.0% | |
| AGATTAAGGTTCAAACTCAT+AGG | - | chr3.3:74907936-74907955 | None:intergenic | 30.0% | |
| AGATTGTGTTAAAAGGAGAT+CGG | - | chr3.3:74907987-74908006 | None:intergenic | 30.0% | |
| AGCTCTGTTAAAAAAAGAGA+AGG | - | chr3.3:74907787-74907806 | None:intergenic | 30.0% | |
| AGGAAAAAAAAATTAGCCCA+GGG | + | chr3.3:74908807-74908826 | MS.gene02630:intron | 30.0% | |
| AGTCACACATAGTACTTAAA+TGG | + | chr3.3:74911052-74911071 | MS.gene02630:intron | 30.0% | |
| ATAGAATGTTGTGAGGAAAA+AGG | + | chr3.3:74910859-74910878 | MS.gene02630:CDS | 30.0% | |
| ATATAGCAATTGAGCTAATC+GGG | + | chr3.3:74910473-74910492 | MS.gene02630:CDS | 30.0% | |
| ATCAAATTAACACAATGGCA+TGG | + | chr3.3:74908573-74908592 | MS.gene02630:intron | 30.0% | |
| ATCAGAAGATATGTAAGCTT+TGG | - | chr3.3:74909269-74909288 | None:intergenic | 30.0% | |
| ATGGAAAAAAGTCATCAAAG+AGG | - | chr3.3:74908310-74908329 | None:intergenic | 30.0% | |
| CAAAATTACCATAATGGCAT+GGG | - | chr3.3:74908848-74908867 | None:intergenic | 30.0% | |
| CATATAGCAATTGAGCTAAT+CGG | + | chr3.3:74910472-74910491 | MS.gene02630:CDS | 30.0% | |
| CATGATCAGATTGTGTTAAA+AGG | - | chr3.3:74907994-74908013 | None:intergenic | 30.0% | |
| CGTCATCAAAATTACCATAA+TGG | - | chr3.3:74908854-74908873 | None:intergenic | 30.0% | |
| CTTACATGACACATTCATAT+TGG | - | chr3.3:74909523-74909542 | None:intergenic | 30.0% | |
| GATAAGATTAAGGTAAACCT+TGG | - | chr3.3:74907500-74907519 | None:intergenic | 30.0% | |
| GCGAAATCAAGATAAGATTA+AGG | - | chr3.3:74907510-74907529 | None:intergenic | 30.0% | |
| GCTTCAGTTTCTACTTTAAT+TGG | + | chr3.3:74908140-74908159 | MS.gene02630:intron | 30.0% | |
| TAACTGATTAAACTTTGCAG+GGG | - | chr3.3:74908515-74908534 | None:intergenic | 30.0% | |
| TATAAGATAGAGGTCATGAA+AGG | + | chr3.3:74911130-74911149 | MS.gene02630:intron | 30.0% | |
| TCAAAATTACCATAATGGCA+TGG | - | chr3.3:74908849-74908868 | None:intergenic | 30.0% | |
| TCAAATTAACACAATGGCAT+GGG | + | chr3.3:74908574-74908593 | MS.gene02630:intron | 30.0% | |
| TCATACTCAGGATCAAAATA+TGG | - | chr3.3:74907452-74907471 | None:intergenic | 30.0% | |
| TCCCATATGAAATTTGAACA+GGG | - | chr3.3:74909369-74909388 | None:intergenic | 30.0% | |
| TCTTAATGTCTTCTATGTGA+GGG | + | chr3.3:74911783-74911802 | MS.gene02630:CDS | 30.0% | |
| TGTTCAAATTTCATATGGGA+CGG | + | chr3.3:74909369-74909388 | MS.gene02630:intron | 30.0% | |
| TTAAATGGTTCAAATGTCGA+GGG | + | chr3.3:74911067-74911086 | MS.gene02630:intron | 30.0% | |
| TTGTACCATCATTGACATAA+AGG | - | chr3.3:74910606-74910625 | None:intergenic | 30.0% | |
| TTTAACACAATCTGATCATG+AGG | + | chr3.3:74907994-74908013 | MS.gene02630:intron | 30.0% | |
| ! | AGATACAGCTTTTCTCAATT+TGG | + | chr3.3:74911237-74911256 | MS.gene02630:intron | 30.0% |
| ! | AGTTGATTCATTCTAACAGT+TGG | - | chr3.3:74911898-74911917 | None:intergenic | 30.0% |
| ! | ATAACTGCCAAAGTTTTCAA+CGG | - | chr3.3:74909466-74909485 | None:intergenic | 30.0% |
| ! | ATTGGTTTCAGCTAAGATTA+AGG | - | chr3.3:74907950-74907969 | None:intergenic | 30.0% |
| ! | CAAACTCATCTTAGTTCTTT+CGG | + | chr3.3:74907844-74907863 | MS.gene02630:intron | 30.0% |
| ! | CAATGTTTGGTAACAAAGTT+CGG | - | chr3.3:74909717-74909736 | None:intergenic | 30.0% |
| ! | TATGCAATGTAAAAGTATGG+TGG | + | chr3.3:74909967-74909986 | MS.gene02630:intron | 30.0% |
| ! | TTTTTCATACAATAGGCTCT+AGG | + | chr3.3:74910376-74910395 | MS.gene02630:intron | 30.0% |
| ! | TTTTTCCTCACAACATTCTA+TGG | - | chr3.3:74910860-74910879 | None:intergenic | 30.0% |
| !! | ATTGTGTTAATTTGATGACG+TGG | - | chr3.3:74908569-74908588 | None:intergenic | 30.0% |
| !! | TTTGATAGTGTTAACAAACC+TGG | + | chr3.3:74909193-74909212 | MS.gene02630:CDS | 30.0% |
| !! | TTTTTCAATTACTCATCGCA+AGG | - | chr3.3:74909808-74909827 | None:intergenic | 30.0% |
| !!! | ATTTGATGGTTTTAGGCAAA+AGG | - | chr3.3:74907567-74907586 | None:intergenic | 30.0% |
| !!! | TCTTTGATGACTTTTTTCCA+TGG | + | chr3.3:74908309-74908328 | MS.gene02630:intron | 30.0% |
| !!! | TTATGGTAATTTTGATGACG+TGG | + | chr3.3:74908854-74908873 | MS.gene02630:intron | 30.0% |
| AAGATTAAGGTAAACCTTGG+AGG | - | chr3.3:74907497-74907516 | None:intergenic | 35.0% | |
| AATGATGGTAGATGTGAAGA+AGG | + | chr3.3:74911870-74911889 | MS.gene02630:CDS | 35.0% | |
| AATGTTGATCGTGTACCTTT+AGG | + | chr3.3:74911402-74911421 | MS.gene02630:intron | 35.0% | |
| ACAAGTGGCTACTTAAAAAG+TGG | - | chr3.3:74909080-74909099 | None:intergenic | 35.0% | |
| AGAAATCGGTAAGACAATGA+TGG | + | chr3.3:74911855-74911874 | MS.gene02630:CDS | 35.0% | |
| AGATTAAGGTAAACCTTGGA+GGG | - | chr3.3:74907496-74907515 | None:intergenic | 35.0% | |
| ATATGAAGACTTGAGGAATG+TGG | + | chr3.3:74911374-74911393 | MS.gene02630:intron | 35.0% | |
| ATCAATATGGGTGAAACTCA+TGG | - | chr3.3:74910737-74910756 | None:intergenic | 35.0% | |
| ATGGTAACCGTTGAAAACTT+TGG | + | chr3.3:74909456-74909475 | MS.gene02630:intron | 35.0% | |
| CACACAATCACACACATTTA+TGG | + | chr3.3:74910032-74910051 | MS.gene02630:intron | 35.0% | |
| CACTTATTGCATACAGTACT+TGG | + | chr3.3:74911924-74911943 | MS.gene02630:CDS | 35.0% | |
| CCATAACTGTACACTAATCA+AGG | + | chr3.3:74908254-74908273 | MS.gene02630:CDS | 35.0% | |
| CCTTGATTAGTGTACAGTTA+TGG | - | chr3.3:74908257-74908276 | None:intergenic | 35.0% | |
| CTCTTAATGTCTTCTATGTG+AGG | + | chr3.3:74911782-74911801 | MS.gene02630:CDS | 35.0% | |
| CTTAAATGGTTCAAATGTCG+AGG | + | chr3.3:74911066-74911085 | MS.gene02630:intron | 35.0% | |
| CTTTGTAGGGGCAAAAAAAA+AGG | + | chr3.3:74908920-74908939 | MS.gene02630:intron | 35.0% | |
| GATCGGGATTATGAAAGTTA+TGG | + | chr3.3:74910784-74910803 | MS.gene02630:CDS | 35.0% | |
| GCATAAACGTGTGAATTTGA+TGG | - | chr3.3:74907581-74907600 | None:intergenic | 35.0% | |
| GCCCTGTTCAAATTTCATAT+GGG | + | chr3.3:74909365-74909384 | MS.gene02630:intron | 35.0% | |
| GGAAAAAAAAATTAGCCCAG+GGG | + | chr3.3:74908808-74908827 | MS.gene02630:intron | 35.0% | |
| GGAGGATTTGTGTATTCAAA+TGG | + | chr3.3:74911158-74911177 | MS.gene02630:intron | 35.0% | |
| GTAGAAACTGAAGCTGAATA+AGG | - | chr3.3:74908134-74908153 | None:intergenic | 35.0% | |
| GTCCCATATGAAATTTGAAC+AGG | - | chr3.3:74909370-74909389 | None:intergenic | 35.0% | |
| GTTCAAATTTCATATGGGAC+GGG | + | chr3.3:74909370-74909389 | MS.gene02630:intron | 35.0% | |
| TAAAAAGTGGTACTCACAGA+GGG | - | chr3.3:74909067-74909086 | None:intergenic | 35.0% | |
| TAACAAACCTGGAATTCTAC+TGG | + | chr3.3:74909204-74909223 | MS.gene02630:CDS | 35.0% | |
| TAATAGTCAAGAGGTGGTAA+TGG | + | chr3.3:74909437-74909456 | MS.gene02630:intron | 35.0% | |
| TATGAGTCATACTCACTGAT+AGG | - | chr3.3:74909558-74909577 | None:intergenic | 35.0% | |
| TATTCAAAGAAGAGTAAGCG+AGG | + | chr3.3:74911507-74911526 | MS.gene02630:CDS | 35.0% | |
| TCTTCACTTCTTCTTTGTTC+TGG | - | chr3.3:74910411-74910430 | None:intergenic | 35.0% | |
| TGAGTTTCACCCATATTGAT+AGG | + | chr3.3:74910737-74910756 | MS.gene02630:CDS | 35.0% | |
| TGCCCTGTTCAAATTTCATA+TGG | + | chr3.3:74909364-74909383 | MS.gene02630:intron | 35.0% | |
| TGGAAGACTCAAATTCATTG+CGG | + | chr3.3:74910276-74910295 | MS.gene02630:intron | 35.0% | |
| TGTGTCCTTTATGTCAATGA+TGG | + | chr3.3:74910598-74910617 | MS.gene02630:CDS | 35.0% | |
| TTAAAAAGTGGTACTCACAG+AGG | - | chr3.3:74909068-74909087 | None:intergenic | 35.0% | |
| TTGCTGAAATTCTCATACTC+AGG | - | chr3.3:74907464-74907483 | None:intergenic | 35.0% | |
| TTGTGAGGAAAAAGGATACT+CGG | + | chr3.3:74910867-74910886 | MS.gene02630:CDS | 35.0% | |
| ! | AAAAAAGGATTAGCGATTGC+AGG | + | chr3.3:74908935-74908954 | MS.gene02630:intron | 35.0% |
| ! | AAAAAAGGATTAGCGATTGC+AGG | - | chr3.3:74908954-74908935 | None:intergenic | 35.0% |
| ! | AAAAAGGATTAGCGATTGCA+GGG | + | chr3.3:74908936-74908955 | MS.gene02630:intron | 35.0% |
| ! | AAAAAGGATTAGCGATTGCA+GGG | - | chr3.3:74908955-74908936 | None:intergenic | 35.0% |
| ! | ACAAGAATTCTGAGAGAGAA+TGG | + | chr3.3:74911715-74911734 | MS.gene02630:CDS | 35.0% |
| ! | ACCAAATGTTGTTTGCTGAT+CGG | + | chr3.3:74910767-74910786 | MS.gene02630:CDS | 35.0% |
| ! | AGAGTGTTAAAGTGTGGTAT+TGG | - | chr3.3:74909895-74909914 | None:intergenic | 35.0% |
| ! | ATCAGCTACTTTAGAAGTCT+AGG | + | chr3.3:74908357-74908376 | MS.gene02630:intron | 35.0% |
| ! | ATTCTATGGTAATTTTCGGC+CGG | - | chr3.3:74910846-74910865 | None:intergenic | 35.0% |
| ! | CACCTTTTCAATGAGATCTA+TGG | - | chr3.3:74910181-74910200 | None:intergenic | 35.0% |
| ! | CAGCTCAATAACATTTTACG+TGG | + | chr3.3:74910670-74910689 | MS.gene02630:CDS | 35.0% |
| ! | CTTTGGTGATTATGAAGTCA+AGG | - | chr3.3:74909252-74909271 | None:intergenic | 35.0% |
| ! | GAAGCACTTCGTAAAGAAAT+CGG | + | chr3.3:74911841-74911860 | MS.gene02630:CDS | 35.0% |
| ! | TAACATTTTACGTGGATGTG+AGG | + | chr3.3:74910678-74910697 | MS.gene02630:CDS | 35.0% |
| !! | AAAAGAAGTGTCCTCTTTGA+TGG | + | chr3.3:74908184-74908203 | MS.gene02630:intron | 35.0% |
| !! | CGTGTGAATTTGATGGTTTT+AGG | - | chr3.3:74907574-74907593 | None:intergenic | 35.0% |
| !! | GTTTTAGACGAAAAAGGAAG+AGG | + | chr3.3:74909869-74909888 | MS.gene02630:intron | 35.0% |
| !! | TAGACTTCTAAAGTAGCTGA+TGG | - | chr3.3:74908358-74908377 | None:intergenic | 35.0% |
| !!! | GCATGAGTTTTAGACGAAAA+AGG | + | chr3.3:74909863-74909882 | MS.gene02630:intron | 35.0% |
| !!! | TCTTCTTTGTTCTGGCTTTT+TGG | - | chr3.3:74910403-74910422 | None:intergenic | 35.0% |
| AAATTTCATATGGGACGGGA+CGG | + | chr3.3:74909374-74909393 | MS.gene02630:intron | 40.0% | |
| ACATATCTTCTGATGGAGGA+TGG | + | chr3.3:74909275-74909294 | MS.gene02630:CDS | 40.0% | |
| AGAATGGCCTAACAGTTTGT+AGG | + | chr3.3:74911731-74911750 | MS.gene02630:CDS | 40.0% | |
| AGGTATTAAAACAGCACTCC+CGG | - | chr3.3:74909788-74909807 | None:intergenic | 40.0% | |
| ATACAGAAGGGGAGAAAGAA+AGG | + | chr3.3:74911461-74911480 | MS.gene02630:CDS | 40.0% | |
| ATATCTCAGACAAGAGACCA+GGG | - | chr3.3:74910507-74910526 | None:intergenic | 40.0% | |
| ATGAATTTGAGTCTTCCACG+TGG | - | chr3.3:74910274-74910293 | None:intergenic | 40.0% | |
| ATGCACACTTGATACAGAAG+GGG | + | chr3.3:74911450-74911469 | MS.gene02630:CDS | 40.0% | |
| ATGGAGAGAAAGTTGCTAGT+AGG | + | chr3.3:74910701-74910720 | MS.gene02630:CDS | 40.0% | |
| CAGCTACAACCACGTTAAAA+TGG | - | chr3.3:74910549-74910568 | None:intergenic | 40.0% | |
| CCAAACCACAACTCATATAG+AGG | - | chr3.3:74908335-74908354 | None:intergenic | 40.0% | |
| CCTCTATATGAGTTGTGGTT+TGG | + | chr3.3:74908332-74908351 | MS.gene02630:intron | 40.0% | |
| CTACAACCACGTTAAAATGG+AGG | - | chr3.3:74910546-74910565 | None:intergenic | 40.0% | |
| CTCATAGTGCAGTACAGTTT+AGG | + | chr3.3:74909572-74909591 | MS.gene02630:intron | 40.0% | |
| CTTTGCAGGGGCAAAAAAAA+AGG | - | chr3.3:74908503-74908522 | None:intergenic | 40.0% | |
| GAAGAAGTGAAGAATTGGTC+AGG | + | chr3.3:74910418-74910437 | MS.gene02630:CDS | 40.0% | |
| GAAGAATTGGTCAGGCAAAT+GGG | + | chr3.3:74910426-74910445 | MS.gene02630:CDS | 40.0% | |
| GAATGGCCTAACAGTTTGTA+GGG | + | chr3.3:74911732-74911751 | MS.gene02630:CDS | 40.0% | |
| GAATTGACGAAAATACCCCT+GGG | - | chr3.3:74908615-74908596 | None:intergenic | 40.0% | |
| GAGTGAGACACTACATATGT+TGG | - | chr3.3:74907667-74907686 | None:intergenic | 40.0% | |
| GATCAGCAAACAACATTTGG+TGG | - | chr3.3:74910768-74910787 | None:intergenic | 40.0% | |
| GATGCACACTTGATACAGAA+GGG | + | chr3.3:74911449-74911468 | MS.gene02630:CDS | 40.0% | |
| GCTTACATATCTTCTGATGG+AGG | + | chr3.3:74909271-74909290 | MS.gene02630:CDS | 40.0% | |
| GTGACTGATAAGTGAACATG+CGG | - | chr3.3:74911038-74911057 | None:intergenic | 40.0% | |
| GTTAAAAGGAGATCGGAGTT+GGG | - | chr3.3:74907980-74907999 | None:intergenic | 40.0% | |
| GTTATTCGTCCCTGCAAATA+GGG | + | chr3.3:74908444-74908463 | MS.gene02630:intron | 40.0% | |
| GTTATTCGTCCCTGCAAATA+GGG | - | chr3.3:74908463-74908444 | None:intergenic | 40.0% | |
| GTTTCACCCATATTGATAGG+CGG | + | chr3.3:74910740-74910759 | MS.gene02630:CDS | 40.0% | |
| GTTTCTATCTAACTACCACG+TGG | + | chr3.3:74910256-74910275 | MS.gene02630:intron | 40.0% | |
| TACAGAAGGGGAGAAAGAAA+GGG | + | chr3.3:74911462-74911481 | MS.gene02630:CDS | 40.0% | |
| TATCCTTTGCACACAACTCT+AGG | - | chr3.3:74911672-74911691 | None:intergenic | 40.0% | |
| TGAAGAATTGGTCAGGCAAA+TGG | + | chr3.3:74910425-74910444 | MS.gene02630:CDS | 40.0% | |
| TGTGTTTGAAAAGAGAGAGC+AGG | - | chr3.3:74910016-74910035 | None:intergenic | 40.0% | |
| TGTTAAAAGGAGATCGGAGT+TGG | - | chr3.3:74907981-74908000 | None:intergenic | 40.0% | |
| TGTTATTCGTCCCTGCAAAT+AGG | + | chr3.3:74908443-74908462 | MS.gene02630:intron | 40.0% | |
| TGTTATTCGTCCCTGCAAAT+AGG | - | chr3.3:74908462-74908443 | None:intergenic | 40.0% | |
| TTAAACGACCCCTATTTGCA+GGG | - | chr3.3:74908456-74908475 | None:intergenic | 40.0% | |
| TTATTCGTCCCTGCAAATAG+GGG | + | chr3.3:74908445-74908464 | MS.gene02630:intron | 40.0% | |
| TTATTCGTCCCTGCAAATAG+GGG | - | chr3.3:74908464-74908445 | None:intergenic | 40.0% | |
| TTCATGTCACGGATCAACAA+GGG | + | chr3.3:74910133-74910152 | MS.gene02630:CDS | 40.0% | |
| TTGGGTGAATGAATCAGTCT+AGG | + | chr3.3:74909921-74909940 | MS.gene02630:intron | 40.0% | |
| TTGTGTGCAAAGGATAGAGT+GGG | + | chr3.3:74911676-74911695 | MS.gene02630:CDS | 40.0% | |
| TTTAAACGACCCCTATTTGC+AGG | - | chr3.3:74908457-74908476 | None:intergenic | 40.0% | |
| TTTCATGTCACGGATCAACA+AGG | + | chr3.3:74910132-74910151 | MS.gene02630:CDS | 40.0% | |
| ! | ATTCTACGGATTTTGGACAC+AGG | + | chr3.3:74911639-74911658 | MS.gene02630:intron | 40.0% |
| ! | ATTTTACGTGGATGTGAGGA+TGG | + | chr3.3:74910682-74910701 | MS.gene02630:CDS | 40.0% |
| ! | CCAAATGTTGTTTGCTGATC+GGG | + | chr3.3:74910768-74910787 | MS.gene02630:CDS | 40.0% |
| ! | GCAGTCATTAACTTGGTCAA+GGG | + | chr3.3:74908876-74908895 | MS.gene02630:intron | 40.0% |
| ! | TTCTACGGATTTTGGACACA+GGG | + | chr3.3:74911640-74911659 | MS.gene02630:intron | 40.0% |
| AACCACGTTAAAATGGAGGC+TGG | - | chr3.3:74910542-74910561 | None:intergenic | 45.0% | |
| AATTGGTCAGGCAAATGGGT+TGG | + | chr3.3:74910430-74910449 | MS.gene02630:CDS | 45.0% | |
| ACCACTTCCAGTAGAATTCC+AGG | - | chr3.3:74909214-74909233 | None:intergenic | 45.0% | |
| ACCTGGAATTCTACTGGAAG+TGG | + | chr3.3:74909210-74909229 | MS.gene02630:CDS | 45.0% | |
| ATCCGATGAGATTGTGGCAT+GGG | - | chr3.3:74910974-74910993 | None:intergenic | 45.0% | |
| ATGGAGTAACGACAACAGAC+AGG | + | chr3.3:74910803-74910822 | MS.gene02630:CDS | 45.0% | |
| ATGGCAACTAGCATTGTCCA+CGG | - | chr3.3:74908238-74908257 | None:intergenic | 45.0% | |
| CACAACTCATATAGAGGCCA+TGG | - | chr3.3:74908329-74908348 | None:intergenic | 45.0% | |
| CATGGCCTCTATATGAGTTG+TGG | + | chr3.3:74908327-74908346 | MS.gene02630:intron | 45.0% | |
| CCCGATCAGCAAACAACATT+TGG | - | chr3.3:74910771-74910790 | None:intergenic | 45.0% | |
| CGTCAATTCCCATGCCATTA+TGG | + | chr3.3:74908837-74908856 | MS.gene02630:intron | 45.0% | |
| CTGAAGTGTGGACTCATAAC+AGG | + | chr3.3:74910566-74910585 | MS.gene02630:CDS | 45.0% | |
| GATATCTCAGACAAGAGACC+AGG | - | chr3.3:74910508-74910527 | None:intergenic | 45.0% | |
| GATGTACCTGCGATGCATAA+GGG | - | chr3.3:74910999-74911018 | None:intergenic | 45.0% | |
| GCAACAAAATCAACCCTCCA+AGG | + | chr3.3:74907480-74907499 | MS.gene02630:CDS | 45.0% | |
| GGAATTGACGAAAATACCCC+TGG | + | chr3.3:74908595-74908614 | MS.gene02630:intron | 45.0% | |
| GGAATTGACGAAAATACCCC+TGG | - | chr3.3:74908614-74908595 | None:intergenic | 45.0% | |
| GGAGCAATGTGACAAACAAG+TGG | - | chr3.3:74909095-74909114 | None:intergenic | 45.0% | |
| GGATGCACACTTGATACAGA+AGG | + | chr3.3:74911448-74911467 | MS.gene02630:CDS | 45.0% | |
| GGTGAAACTCATGGACAAAC+TGG | - | chr3.3:74910728-74910747 | None:intergenic | 45.0% | |
| GTTGTGTGCAAAGGATAGAG+TGG | + | chr3.3:74911675-74911694 | MS.gene02630:CDS | 45.0% | |
| TACCTGCCCTACAAACTGTT+AGG | - | chr3.3:74911741-74911760 | None:intergenic | 45.0% | |
| TAGAGGTCATGAAAGGCTTG+TGG | + | chr3.3:74911137-74911156 | MS.gene02630:intron | 45.0% | |
| TCGGAGTTGGGTAGGTAAAT+TGG | - | chr3.3:74907968-74907987 | None:intergenic | 45.0% | |
| TCTATGTGAGGGATGCATCA+GGG | + | chr3.3:74911794-74911813 | MS.gene02630:CDS | 45.0% | |
| TGACGTGGCAGTCATTAACT+TGG | + | chr3.3:74908869-74908888 | MS.gene02630:intron | 45.0% | |
| TGAGGAAAAAGGATACTCGG+TGG | + | chr3.3:74910870-74910889 | MS.gene02630:CDS | 45.0% | |
| TGATGTACCTGCGATGCATA+AGG | - | chr3.3:74911000-74911019 | None:intergenic | 45.0% | |
| TGGAGTAACGACAACAGACA+GGG | + | chr3.3:74910804-74910823 | MS.gene02630:CDS | 45.0% | |
| TTAAGCGACCCCTATTTGCA+GGG | + | chr3.3:74908967-74908986 | MS.gene02630:intron | 45.0% | |
| TTCCCATGCCACAATCTCAT+CGG | + | chr3.3:74910969-74910988 | MS.gene02630:CDS | 45.0% | |
| TTCTATGTGAGGGATGCATC+AGG | + | chr3.3:74911793-74911812 | MS.gene02630:CDS | 45.0% | |
| TTCTGATGGAGGATGGTTCA+TGG | + | chr3.3:74909282-74909301 | MS.gene02630:CDS | 45.0% | |
| TTTAAGCGACCCCTATTTGC+AGG | + | chr3.3:74908966-74908985 | MS.gene02630:intron | 45.0% | |
| ! | ATTAAGAGCTTGTTCCCCTC+TGG | - | chr3.3:74911770-74911789 | None:intergenic | 45.0% |
| ! | ATTGGTCAGGCAAATGGGTT+GGG | + | chr3.3:74910431-74910450 | MS.gene02630:CDS | 45.0% |
| ! | GCAGTCGTTAACTTGGTCAA+TGG | - | chr3.3:74908547-74908566 | None:intergenic | 45.0% |
| ! | GGCAGTCATTAACTTGGTCA+AGG | + | chr3.3:74908875-74908894 | MS.gene02630:intron | 45.0% |
| ! | GTAATTTTCGGCCGGAAAGA+GGG | - | chr3.3:74910838-74910857 | None:intergenic | 45.0% |
| !! | ATTAAAAGTAAAAAAAAATT+CGG | - | chr3.3:74908731-74908750 | None:intergenic | 5.0% |
| !! | TTAAAATTAAAATGTTTAAT+TGG | + | chr3.3:74908098-74908117 | MS.gene02630:intron | 5.0% |
| !!! | TTTATTTTATTTTTGAAATA+CGG | + | chr3.3:74907813-74907832 | MS.gene02630:intron | 5.0% |
| AAAGGAGATCGGAGTTGGGT+AGG | - | chr3.3:74907976-74907995 | None:intergenic | 50.0% | |
| ACGTGGTTGTAGCTGAAGTG+TGG | + | chr3.3:74910554-74910573 | MS.gene02630:CDS | 50.0% | |
| AGGGCAGGTATATCAACCAG+AGG | + | chr3.3:74911751-74911770 | MS.gene02630:CDS | 50.0% | |
| AGGTCATGAAAGGCTTGTGG+AGG | + | chr3.3:74911140-74911159 | MS.gene02630:intron | 50.0% | |
| CGTTAAAATGGAGGCTGGCA+AGG | - | chr3.3:74910537-74910556 | None:intergenic | 50.0% | |
| GAGCCTAGAGTTGTGTGCAA+AGG | + | chr3.3:74911666-74911685 | MS.gene02630:CDS | 50.0% | |
| GATCCGATGAGATTGTGGCA+TGG | - | chr3.3:74910975-74910994 | None:intergenic | 50.0% | |
| GATGGAGGATGGTTCATGGA+TGG | + | chr3.3:74909286-74909305 | MS.gene02630:CDS | 50.0% | |
| GGCAGGTATATCAACCAGAG+GGG | + | chr3.3:74911753-74911772 | MS.gene02630:CDS | 50.0% | |
| GGGCAGGTATATCAACCAGA+GGG | + | chr3.3:74911752-74911771 | MS.gene02630:CDS | 50.0% | |
| GTGGAGCCGCCTATCAATAT+GGG | - | chr3.3:74910749-74910768 | None:intergenic | 50.0% | |
| TGACCACATCTCCGACTACA+GGG | - | chr3.3:74909687-74909706 | None:intergenic | 50.0% | |
| TGACGTGGCAGTCGTTAACT+TGG | - | chr3.3:74908554-74908573 | None:intergenic | 50.0% | |
| TGATGGTACAAGACAAGCCG+TGG | + | chr3.3:74910615-74910634 | MS.gene02630:CDS | 50.0% | |
| ! | GGTAATTTTCGGCCGGAAAG+AGG | - | chr3.3:74910839-74910858 | None:intergenic | 50.0% |
| !! | TGCCAGCCTCCATTTTAACG+TGG | + | chr3.3:74910537-74910556 | MS.gene02630:CDS | 50.0% |
| !! | TTGGTCAGGCAAATGGGTTG+GGG | + | chr3.3:74910432-74910451 | MS.gene02630:CDS | 50.0% |
| AGGGCGATCCGATGAGATTG+TGG | - | chr3.3:74910980-74910999 | None:intergenic | 55.0% | |
| GGATGCATCAGGGAACTCAG+TGG | + | chr3.3:74911804-74911823 | MS.gene02630:CDS | 55.0% | |
| GGCCTAACAGTTTGTAGGGC+AGG | + | chr3.3:74911736-74911755 | MS.gene02630:CDS | 55.0% | |
| GGGAATGTCCTCCCTCTTTC+CGG | + | chr3.3:74910824-74910843 | MS.gene02630:CDS | 55.0% | |
| GGGACGGGACGGTTGTAAAA+TGG | + | chr3.3:74909385-74909404 | MS.gene02630:intron | 55.0% | |
| GGTGGAGCCGCCTATCAATA+TGG | - | chr3.3:74910750-74910769 | None:intergenic | 55.0% | |
| GTGACCACATCTCCGACTAC+AGG | - | chr3.3:74909688-74909707 | None:intergenic | 55.0% | |
| TCTCAGACAAGAGACCAGGG+CGG | - | chr3.3:74910504-74910523 | None:intergenic | 55.0% | |
| TGGTACTCACAGAGGGCTAG+TGG | - | chr3.3:74909060-74909079 | None:intergenic | 55.0% | |
| TGTACTTTGCAGGGTCTCCG+TGG | + | chr3.3:74908218-74908237 | MS.gene02630:intron | 55.0% | |
| ! | ATTTTCGGCCGGAAAGAGGG+AGG | - | chr3.3:74910835-74910854 | None:intergenic | 55.0% |
| ! | TGGGTTGGGGTGCATTCTGT+TGG | + | chr3.3:74910445-74910464 | MS.gene02630:CDS | 55.0% |
| AGTTGTGGCCGCCCTGTAGT+CGG | + | chr3.3:74909673-74909692 | MS.gene02630:intron | 60.0% | |
| CCACATCTCCGACTACAGGG+CGG | - | chr3.3:74909684-74909703 | None:intergenic | 60.0% | |
| GGATCGCCCTTATGCATCGC+AGG | + | chr3.3:74910990-74911009 | MS.gene02630:CDS | 60.0% | |
| CCGCCCTGTAGTCGGAGATG+TGG | + | chr3.3:74909681-74909700 | MS.gene02630:intron | 65.0% | |
| CTAATCGGGAGAGACCGCCC+TGG | + | chr3.3:74910487-74910506 | MS.gene02630:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 74907431 | 74911957 | 74907431 | ID=MS.gene02630 |
| chr3.3 | mRNA | 74907431 | 74911957 | 74907431 | ID=MS.gene02630.t1;Parent=MS.gene02630 |
| chr3.3 | exon | 74907431 | 74907501 | 74907431 | ID=MS.gene02630.t1.exon1;Parent=MS.gene02630.t1 |
| chr3.3 | CDS | 74907431 | 74907501 | 74907431 | ID=cds.MS.gene02630.t1;Parent=MS.gene02630.t1 |
| chr3.3 | exon | 74908230 | 74908275 | 74908230 | ID=MS.gene02630.t1.exon2;Parent=MS.gene02630.t1 |
| chr3.3 | CDS | 74908230 | 74908275 | 74908230 | ID=cds.MS.gene02630.t1;Parent=MS.gene02630.t1 |
| chr3.3 | exon | 74909193 | 74909307 | 74909193 | ID=MS.gene02630.t1.exon3;Parent=MS.gene02630.t1 |
| chr3.3 | CDS | 74909193 | 74909307 | 74909193 | ID=cds.MS.gene02630.t1;Parent=MS.gene02630.t1 |
| chr3.3 | exon | 74910130 | 74910197 | 74910130 | ID=MS.gene02630.t1.exon4;Parent=MS.gene02630.t1 |
| chr3.3 | CDS | 74910130 | 74910197 | 74910130 | ID=cds.MS.gene02630.t1;Parent=MS.gene02630.t1 |
| chr3.3 | exon | 74910391 | 74911011 | 74910391 | ID=MS.gene02630.t1.exon5;Parent=MS.gene02630.t1 |
| chr3.3 | CDS | 74910391 | 74911011 | 74910391 | ID=cds.MS.gene02630.t1;Parent=MS.gene02630.t1 |
| chr3.3 | exon | 74911424 | 74911528 | 74911424 | ID=MS.gene02630.t1.exon6;Parent=MS.gene02630.t1 |
| chr3.3 | CDS | 74911424 | 74911528 | 74911424 | ID=cds.MS.gene02630.t1;Parent=MS.gene02630.t1 |
| chr3.3 | exon | 74911661 | 74911957 | 74911661 | ID=MS.gene02630.t1.exon7;Parent=MS.gene02630.t1 |
| chr3.3 | CDS | 74911661 | 74911957 | 74911661 | ID=cds.MS.gene02630.t1;Parent=MS.gene02630.t1 |
| Gene Sequence |
| Protein sequence |
