Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene026670.t1 | XP_024631268.1 | 98.5 | 454 | 7 | 0 | 1 | 454 | 1 | 454 | 8.40E-261 | 909.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene026670.t1 | O49285 | 69.6 | 460 | 125 | 8 | 1 | 453 | 1 | 452 | 1.5e-181 | 637.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene026670.t1 | A0A396JL16 | 98.5 | 454 | 7 | 0 | 1 | 454 | 1 | 454 | 6.1e-261 | 909.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene026670 | MS.gene44446 | PPI |
| MS.gene015275 | MS.gene026670 | PPI |
| MS.gene011698 | MS.gene026670 | PPI |
| MS.gene026670 | MS.gene43525 | PPI |
| MS.gene026670 | MS.gene20314 | PPI |
| MS.gene09616 | MS.gene026670 | PPI |
| MS.gene60184 | MS.gene026670 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene026670.t1 | MTR_1g029520 | 98.372 | 430 | 7 | 0 | 25 | 454 | 254 | 683 | 0.0 | 877 |
| MS.gene026670.t1 | MTR_3g088885 | 80.837 | 454 | 79 | 6 | 1 | 453 | 1 | 447 | 0.0 | 743 |
| MS.gene026670.t1 | MTR_5g047260 | 53.759 | 439 | 183 | 7 | 8 | 446 | 16 | 434 | 1.26e-154 | 446 |
| MS.gene026670.t1 | MTR_7g022470 | 51.910 | 445 | 201 | 6 | 9 | 453 | 10 | 441 | 1.09e-151 | 439 |
| MS.gene026670.t1 | MTR_7g028050 | 49.217 | 447 | 212 | 8 | 9 | 452 | 1 | 435 | 9.17e-142 | 413 |
| MS.gene026670.t1 | MTR_4g101950 | 46.154 | 429 | 191 | 7 | 6 | 426 | 3 | 399 | 1.50e-129 | 382 |
| MS.gene026670.t1 | MTR_5g015170 | 46.207 | 435 | 215 | 8 | 10 | 432 | 10 | 437 | 3.41e-127 | 377 |
| MS.gene026670.t1 | MTR_5g011580 | 44.592 | 453 | 222 | 8 | 6 | 453 | 3 | 431 | 4.02e-127 | 376 |
| MS.gene026670.t1 | MTR_5g047260 | 52.355 | 361 | 156 | 5 | 8 | 368 | 16 | 360 | 3.01e-123 | 363 |
| MS.gene026670.t1 | MTR_4g097380 | 42.143 | 420 | 235 | 3 | 7 | 420 | 26 | 443 | 8.52e-116 | 348 |
| MS.gene026670.t1 | MTR_5g047260 | 53.398 | 309 | 129 | 4 | 8 | 316 | 16 | 309 | 1.45e-105 | 316 |
| MS.gene026670.t1 | MTR_7g028050 | 48.955 | 335 | 161 | 6 | 121 | 452 | 5 | 332 | 2.42e-99 | 301 |
| MS.gene026670.t1 | MTR_1g012740 | 49.000 | 100 | 45 | 1 | 283 | 382 | 54 | 147 | 7.81e-24 | 98.2 |
| MS.gene026670.t1 | MTR_1g012740 | 35.099 | 151 | 69 | 6 | 6 | 150 | 7 | 134 | 2.41e-16 | 77.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene026670.t1 | AT1G76990 | 69.565 | 460 | 125 | 8 | 1 | 453 | 1 | 452 | 0.0 | 654 |
| MS.gene026670.t1 | AT1G76990 | 69.565 | 460 | 125 | 8 | 1 | 453 | 1 | 452 | 0.0 | 654 |
| MS.gene026670.t1 | AT1G76990 | 69.565 | 460 | 125 | 8 | 1 | 453 | 1 | 452 | 0.0 | 654 |
| MS.gene026670.t1 | AT1G76990 | 69.565 | 460 | 125 | 8 | 1 | 453 | 1 | 452 | 0.0 | 654 |
| MS.gene026670.t1 | AT1G76990 | 69.565 | 460 | 125 | 8 | 1 | 453 | 1 | 452 | 0.0 | 654 |
| MS.gene026670.t1 | AT1G69040 | 52.370 | 443 | 198 | 6 | 9 | 450 | 11 | 441 | 2.82e-150 | 435 |
| MS.gene026670.t1 | AT1G69040 | 52.370 | 443 | 198 | 6 | 9 | 450 | 7 | 437 | 3.20e-150 | 435 |
| MS.gene026670.t1 | AT5G25320 | 49.206 | 441 | 196 | 7 | 1 | 414 | 1 | 440 | 1.92e-145 | 425 |
| MS.gene026670.t1 | AT2G03730 | 50.000 | 458 | 205 | 9 | 4 | 451 | 3 | 446 | 3.05e-145 | 422 |
| MS.gene026670.t1 | AT2G03730 | 50.000 | 458 | 205 | 9 | 4 | 451 | 3 | 446 | 3.05e-145 | 422 |
| MS.gene026670.t1 | AT3G01990 | 50.493 | 406 | 186 | 5 | 10 | 415 | 17 | 407 | 1.11e-136 | 400 |
| MS.gene026670.t1 | AT3G01990 | 50.493 | 406 | 186 | 5 | 10 | 415 | 17 | 407 | 1.11e-136 | 400 |
| MS.gene026670.t1 | AT3G01990 | 50.493 | 406 | 186 | 5 | 10 | 415 | 3 | 393 | 1.91e-136 | 399 |
| MS.gene026670.t1 | AT3G01990 | 50.493 | 406 | 186 | 5 | 10 | 415 | 3 | 393 | 1.91e-136 | 399 |
| MS.gene026670.t1 | AT3G01990 | 50.493 | 406 | 186 | 5 | 10 | 415 | 17 | 407 | 2.36e-136 | 399 |
| MS.gene026670.t1 | AT3G01990 | 50.493 | 406 | 186 | 5 | 10 | 415 | 3 | 393 | 2.82e-136 | 399 |
| MS.gene026670.t1 | AT5G25320 | 48.259 | 402 | 182 | 5 | 38 | 414 | 1 | 401 | 2.09e-126 | 375 |
| MS.gene026670.t1 | AT4G22780 | 47.160 | 405 | 189 | 4 | 12 | 415 | 9 | 389 | 1.50e-123 | 367 |
| MS.gene026670.t1 | AT4G22780 | 47.160 | 405 | 189 | 4 | 12 | 415 | 9 | 389 | 1.50e-123 | 367 |
| MS.gene026670.t1 | AT1G12420 | 45.476 | 420 | 206 | 8 | 8 | 427 | 6 | 402 | 1.24e-119 | 357 |
| MS.gene026670.t1 | AT5G25320 | 47.059 | 374 | 170 | 7 | 1 | 347 | 1 | 373 | 4.67e-112 | 335 |
| MS.gene026670.t1 | AT5G65890 | 40.213 | 470 | 254 | 7 | 7 | 454 | 8 | 472 | 1.40e-110 | 335 |
| MS.gene026670.t1 | AT5G65890 | 40.213 | 470 | 254 | 7 | 7 | 454 | 8 | 472 | 1.40e-110 | 335 |
| MS.gene026670.t1 | AT3G01990 | 48.980 | 343 | 160 | 5 | 10 | 352 | 17 | 344 | 8.15e-108 | 323 |
| MS.gene026670.t1 | AT3G01990 | 48.980 | 343 | 160 | 5 | 10 | 352 | 3 | 330 | 8.84e-108 | 323 |
| MS.gene026670.t1 | AT3G01990 | 49.408 | 338 | 156 | 5 | 10 | 347 | 17 | 339 | 1.40e-107 | 322 |
| MS.gene026670.t1 | AT1G12420 | 43.182 | 352 | 178 | 7 | 76 | 427 | 1 | 330 | 7.82e-91 | 280 |
| MS.gene026670.t1 | AT5G65890 | 37.882 | 425 | 237 | 7 | 52 | 454 | 1 | 420 | 3.13e-89 | 278 |
| MS.gene026670.t1 | AT5G65890 | 37.882 | 425 | 237 | 7 | 52 | 454 | 1 | 420 | 3.13e-89 | 278 |
| MS.gene026670.t1 | AT3G01990 | 47.003 | 317 | 153 | 5 | 10 | 326 | 3 | 304 | 2.77e-88 | 271 |
| MS.gene026670.t1 | AT3G01990 | 47.003 | 317 | 153 | 5 | 10 | 326 | 17 | 318 | 3.21e-88 | 272 |
| MS.gene026670.t1 | AT5G65890 | 36.000 | 350 | 201 | 5 | 124 | 454 | 13 | 358 | 6.45e-66 | 216 |
Find 131 sgRNAs with CRISPR-Local
Find 301 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCCAACTCTTCACACCTTC+TGG | 0.132030 | 1.2:+15409737 | None:intergenic |
| TTGACTCTCCTCCCTCTTTC+AGG | 0.160628 | 1.2:-15409316 | MS.gene026670:CDS |
| TTCTGATGGTAGTTGGTTTA+TGG | 0.190044 | 1.2:-15410544 | MS.gene026670:CDS |
| AATACGCTCTATTTCAATAT+TGG | 0.195002 | 1.2:+15409292 | None:intergenic |
| GCCCATCCTCGAGACGTTTC+TGG | 0.220608 | 1.2:+15407007 | None:intergenic |
| CACGACTTCCAGCAGAATTC+CGG | 0.249259 | 1.2:+15410614 | None:intergenic |
| CCCAACTCTTCACACCTTCT+GGG | 0.315377 | 1.2:+15409738 | None:intergenic |
| GAAGCACTGCGTAAAGAAAT+TGG | 0.317035 | 1.2:-15407079 | MS.gene026670:CDS |
| GCTAGAGTAAGCTTCTTCTT+TGG | 0.317293 | 1.2:-15406986 | MS.gene026670:CDS |
| ATACGCTCTATTTCAATATT+GGG | 0.319901 | 1.2:+15409293 | None:intergenic |
| CTAGAGTAAGCTTCTTCTTT+GGG | 0.326628 | 1.2:-15406985 | MS.gene026670:CDS |
| CCAAATGTTGTTTGCTGATA+GGG | 0.330716 | 1.2:-15409378 | MS.gene026670:CDS |
| TCTAATTCGCAGGGTCTCTA+TGG | 0.333159 | 1.2:-15411206 | MS.gene026670:intron |
| ACCAAATGTTGTTTGCTGAT+AGG | 0.341425 | 1.2:-15409379 | MS.gene026670:CDS |
| CCCTATCAGCAAACAACATT+TGG | 0.356933 | 1.2:+15409378 | None:intergenic |
| TTCAATATTGGGCCTGAAAG+AGG | 0.366015 | 1.2:+15409304 | None:intergenic |
| ATTTAGTCCTTTCTCTCCTA+TGG | 0.378855 | 1.2:+15407153 | None:intergenic |
| CTTCTTCTTTGGGAACTTGT+TGG | 0.378986 | 1.2:-15406975 | MS.gene026670:CDS |
| ATAGAGCGTATTGAGGAAAA+AGG | 0.379809 | 1.2:-15409281 | MS.gene026670:CDS |
| GGTGAAACCCATGGAGAAAC+TGG | 0.381534 | 1.2:+15409427 | None:intergenic |
| TCGAGACGTTTCTGGTGCTT+TGG | 0.390958 | 1.2:+15407015 | None:intergenic |
| CTGTTGCATCATTGACATAA+AGG | 0.392060 | 1.2:+15409549 | None:intergenic |
| CAGCTGCAATCACATTGAAT+TGG | 0.392381 | 1.2:+15409606 | None:intergenic |
| ACGACTTCCAGCAGAATTCC+GGG | 0.392506 | 1.2:+15410615 | None:intergenic |
| TCTGGGCTCTTGCGGCCCTT+TGG | 0.393975 | 1.2:+15409755 | None:intergenic |
| CTGAAGTTTGGACTCATAAC+AGG | 0.401956 | 1.2:-15409586 | MS.gene026670:CDS |
| CGTTTCTGGTGCTTTGGTGT+TGG | 0.410409 | 1.2:+15407021 | None:intergenic |
| ACATATCTTCTGATGGTAGT+TGG | 0.412715 | 1.2:-15410551 | MS.gene026670:CDS |
| ATGTGATTGCAGCTGAAGTT+TGG | 0.418119 | 1.2:-15409598 | MS.gene026670:CDS |
| ATCAGAAGATATGTAAGCTT+TGG | 0.421120 | 1.2:+15410560 | None:intergenic |
| GCCCAGAAGGTGTGAAGAGT+TGG | 0.421778 | 1.2:-15409739 | MS.gene026670:CDS |
| AGAACAGCTTAACAGTTTGT+AGG | 0.425881 | 1.2:-15407189 | MS.gene026670:CDS |
| CATTGAATTGGAAGCTCGCC+AGG | 0.426882 | 1.2:+15409618 | None:intergenic |
| ACAAAAGACCTGGGCGGTCC+CGG | 0.430029 | 1.2:+15409657 | None:intergenic |
| CATACAGCCATTGAGCTCAT+TGG | 0.446032 | 1.2:-15409680 | MS.gene026670:CDS |
| TCATACTCAGGATCAAAGTA+TGG | 0.448114 | 1.2:+15411680 | None:intergenic |
| TCTGGTGCTTTGGTGTTGGC+TGG | 0.449272 | 1.2:+15407025 | None:intergenic |
| CAATAAACCCGGAATTCTGC+TGG | 0.451982 | 1.2:-15410622 | MS.gene026670:CDS |
| AATTATTGACTTCATTGAAA+AGG | 0.455728 | 1.2:-15410238 | MS.gene026670:intron |
| AGCTTAACAGTTTGTAGGGC+AGG | 0.456982 | 1.2:-15407184 | MS.gene026670:CDS |
| CCCAGAAGGTGTGAAGAGTT+GGG | 0.459787 | 1.2:-15409738 | MS.gene026670:CDS |
| TCTTTGGGAACTTGTTGGAA+AGG | 0.462241 | 1.2:-15406970 | MS.gene026670:CDS |
| CATGCCTCCATCTCATCTGA+AGG | 0.466025 | 1.2:-15409167 | MS.gene026670:CDS |
| GGCTCGGACCAGTTTCTCCA+TGG | 0.466067 | 1.2:-15409435 | MS.gene026670:CDS |
| TGAAGAGTTGGGAAGGCAAA+CGG | 0.470682 | 1.2:-15409727 | MS.gene026670:CDS |
| ACACTGAAGGGGAGAAAGAA+AGG | 0.477680 | 1.2:-15408227 | MS.gene026670:CDS |
| TCAATGATGTTCATATCCAC+AGG | 0.481133 | 1.2:+15407100 | None:intergenic |
| GTTGAATGGCAAAAGTTTGT+TGG | 0.483753 | 1.2:-15411703 | None:intergenic |
| TTATGAAGTCAAGGTCTGTC+AGG | 0.488033 | 1.2:+15410586 | None:intergenic |
| CGGGTTGGCATTCACTCCAT+TGG | 0.490248 | 1.2:-15409707 | MS.gene026670:CDS |
| TTGCTGAAGTTCTCATACTC+AGG | 0.492722 | 1.2:+15411668 | None:intergenic |
| GTCTGAGATATCAGCTGTCC+TGG | 0.493937 | 1.2:-15409636 | MS.gene026670:CDS |
| GAACAGCTTAACAGTTTGTA+GGG | 0.496514 | 1.2:-15407188 | MS.gene026670:CDS |
| GCTCGGACCAGTTTCTCCAT+GGG | 0.502645 | 1.2:-15409434 | MS.gene026670:CDS |
| TCACATTGACCATCACAGTC+TGG | 0.502894 | 1.2:+15407056 | None:intergenic |
| GAAGAGTTGGGAAGGCAAAC+GGG | 0.503318 | 1.2:-15409726 | MS.gene026670:CDS |
| ATTCTTAGGAGTACTTCATC+AGG | 0.510626 | 1.2:-15408272 | MS.gene026670:intron |
| CTCATTGGCCGGGACCGCCC+AGG | 0.512065 | 1.2:-15409665 | MS.gene026670:CDS |
| TGAACATTTAAATAGGCTCT+AGG | 0.512518 | 1.2:-15409779 | MS.gene026670:intron |
| CCATGATTGTACACTGATCA+AGG | 0.512717 | 1.2:-15411170 | MS.gene026670:intron |
| CACCAGAAACGTCTCGAGGA+TGG | 0.514881 | 1.2:-15407009 | MS.gene026670:CDS |
| CAGCCATTGAGCTCATTGGC+CGG | 0.516255 | 1.2:-15409676 | MS.gene026670:CDS |
| ACCAGAAACGTCTCGAGGAT+GGG | 0.518691 | 1.2:-15407008 | MS.gene026670:CDS |
| ATGCATACCTGTGAAGCATA+AGG | 0.520785 | 1.2:+15409143 | None:intergenic |
| TGAAGGGCCTTATGCTTCAC+AGG | 0.521336 | 1.2:-15409150 | MS.gene026670:intron |
| CCTTGATCAGTGTACAATCA+TGG | 0.522276 | 1.2:+15411170 | None:intergenic |
| AAGCTCAACCACATCCTTCG+TGG | 0.529052 | 1.2:-15409479 | MS.gene026670:CDS |
| TCAATATTGGGCCTGAAAGA+GGG | 0.529751 | 1.2:+15409305 | None:intergenic |
| TATCAGCAAACAACATTTGG+TGG | 0.529977 | 1.2:+15409381 | None:intergenic |
| TTCTATGTGAGAGATGCATA+TGG | 0.536976 | 1.2:-15407127 | MS.gene026670:CDS |
| TAGTGTGAGATGCAAAGATC+GGG | 0.541924 | 1.2:-15409246 | MS.gene026670:CDS |
| TATCCTTTGCGCACAGCTCA+AGG | 0.542089 | 1.2:+15407251 | None:intergenic |
| GATGGTAGTTGGTTTATGGA+TGG | 0.543454 | 1.2:-15410540 | MS.gene026670:intron |
| GATATCTCAGACAAAAGACC+TGG | 0.545024 | 1.2:+15409647 | None:intergenic |
| TACTTCATCAGGCACGTGGA+TGG | 0.545747 | 1.2:-15408261 | MS.gene026670:CDS |
| GTGTCAACCATAGGAGAGAA+AGG | 0.546097 | 1.2:-15407160 | MS.gene026670:CDS |
| CCTTCTGTCCATGTGGGTGA+AGG | 0.546823 | 1.2:+15409406 | None:intergenic |
| AGCCATTGAGCTCATTGGCC+GGG | 0.553592 | 1.2:-15409675 | MS.gene026670:CDS |
| AAGTTAACAGGGAACCTTGG+AGG | 0.558483 | 1.2:+15411635 | None:intergenic |
| GTCCCGGCCAATGAGCTCAA+TGG | 0.558624 | 1.2:+15409673 | None:intergenic |
| TAAATAGGCTCTAGGACCAA+AGG | 0.562311 | 1.2:-15409771 | MS.gene026670:intron |
| AAGGGCCGCAAGAGCCCAGA+AGG | 0.562789 | 1.2:-15409752 | MS.gene026670:CDS |
| GGATGCACACTTGACACTGA+AGG | 0.564728 | 1.2:-15408240 | MS.gene026670:CDS |
| ATGCCTCCATCTCATCTGAA+GGG | 0.564762 | 1.2:-15409166 | MS.gene026670:CDS |
| GGGTTTCACCTTCACCCACA+TGG | 0.565505 | 1.2:-15409414 | MS.gene026670:CDS |
| GCTTGCTGTCTGAAGTGACT+AGG | 0.566444 | 1.2:-15407222 | MS.gene026670:CDS |
| TCACACCTTCTGGGCTCTTG+CGG | 0.569295 | 1.2:+15409747 | None:intergenic |
| AAATAGGCTCTAGGACCAAA+GGG | 0.571475 | 1.2:-15409770 | MS.gene026670:intron |
| CCTCACAACCACGAAGGATG+TGG | 0.572226 | 1.2:+15409471 | None:intergenic |
| CTTTGGTAATTATGAAGTCA+AGG | 0.574350 | 1.2:+15410577 | None:intergenic |
| CCTTCACCCACATGGACAGA+AGG | 0.575437 | 1.2:-15409406 | MS.gene026670:CDS |
| GATGCACACTTGACACTGAA+GGG | 0.583904 | 1.2:-15408239 | MS.gene026670:CDS |
| CCACATCCTTCGTGGTTGTG+AGG | 0.585266 | 1.2:-15409471 | MS.gene026670:CDS |
| AATGGCTGTATGATCACCAA+TGG | 0.585858 | 1.2:+15409691 | None:intergenic |
| TTAGTGTGAGATGCAAAGAT+CGG | 0.586475 | 1.2:-15409247 | MS.gene026670:CDS |
| AGGGCAGGTGTGTCAACCAT+AGG | 0.587010 | 1.2:-15407169 | MS.gene026670:CDS |
| TATTGAAATAGAGCGTATTG+AGG | 0.589158 | 1.2:-15409288 | MS.gene026670:CDS |
| GTGGAGCCTTCTGTCCATGT+GGG | 0.594043 | 1.2:+15409400 | None:intergenic |
| AAAGCTTACATATCTTCTGA+TGG | 0.594595 | 1.2:-15410558 | MS.gene026670:CDS |
| AGTTGGGAAGGCAAACGGGT+TGG | 0.597769 | 1.2:-15409722 | MS.gene026670:CDS |
| CTGTGCGCAAAGGATAGAGT+GGG | 0.600715 | 1.2:-15407244 | MS.gene026670:CDS |
| CAATGATGTTCATATCCACA+GGG | 0.601090 | 1.2:+15407101 | None:intergenic |
| GAAGGTGTGAAGAGTTGGGA+AGG | 0.603934 | 1.2:-15409734 | MS.gene026670:CDS |
| ATAAGGCCCTTCAGATGAGA+TGG | 0.605356 | 1.2:+15409160 | None:intergenic |
| GATAGGGATTATGAGAGTGC+TGG | 0.606196 | 1.2:-15409362 | MS.gene026670:CDS |
| CACTGAAGGGGAGAAAGAAA+GGG | 0.607213 | 1.2:-15408226 | MS.gene026670:CDS |
| ATGAACAGTATTTCATGTCA+CGG | 0.611220 | 1.2:-15410292 | MS.gene026670:intron |
| TGTGATGGTCAATGTGAAGA+AGG | 0.612803 | 1.2:-15407050 | MS.gene026670:CDS |
| AGAAATTGGCCAGACTGTGA+TGG | 0.614374 | 1.2:-15407065 | MS.gene026670:CDS |
| AGGGATTATGAGAGTGCTGG+TGG | 0.616212 | 1.2:-15409359 | MS.gene026670:CDS |
| TGTCTGCACTCTTACTGACA+TGG | 0.618144 | 1.2:-15409204 | MS.gene026670:CDS |
| GCTGTGCGCAAAGGATAGAG+TGG | 0.635425 | 1.2:-15407245 | MS.gene026670:CDS |
| TATTCAAAGAAGAGTAAGCG+AGG | 0.636120 | 1.2:-15408181 | MS.gene026670:intron |
| GCAACAGAATCAATCCTCCA+AGG | 0.646007 | 1.2:-15411649 | MS.gene026670:intron |
| GGTGGAGCCTTCTGTCCATG+TGG | 0.646466 | 1.2:+15409399 | None:intergenic |
| TTGTGAGGATGATGAGAATG+TGG | 0.655874 | 1.2:-15409456 | MS.gene026670:CDS |
| AGGCCCTTCAGATGAGATGG+AGG | 0.656278 | 1.2:+15409163 | None:intergenic |
| GTGGGTGAAGGTGAAACCCA+TGG | 0.659048 | 1.2:+15409418 | None:intergenic |
| GGAGTACTTCATCAGGCACG+TGG | 0.663877 | 1.2:-15408265 | MS.gene026670:CDS |
| GAGCCTTGAGCTGTGCGCAA+AGG | 0.664760 | 1.2:-15407254 | MS.gene026670:CDS |
| ATGCACACTTGACACTGAAG+GGG | 0.665219 | 1.2:-15408238 | MS.gene026670:CDS |
| ATTGATAGCGTCAATAAACC+CGG | 0.669304 | 1.2:-15410633 | MS.gene026670:CDS |
| TTTCATGTCACGGATCAGCA+AGG | 0.670024 | 1.2:-15410282 | MS.gene026670:CDS |
| ATATCTCAGACAAAAGACCT+GGG | 0.673607 | 1.2:+15409648 | None:intergenic |
| CATCATCCTCACAACCACGA+AGG | 0.690210 | 1.2:+15409465 | None:intergenic |
| AGGATGATGAGAATGTGGCT+CGG | 0.697192 | 1.2:-15409451 | MS.gene026670:CDS |
| ATATTGGGCCTGAAAGAGGG+AGG | 0.704198 | 1.2:+15409308 | None:intergenic |
| TGATGCAACAGATCAAGCTG+TGG | 0.710766 | 1.2:-15409537 | MS.gene026670:CDS |
| AAAGCACCAGAAACGTCTCG+AGG | 0.732207 | 1.2:-15407013 | MS.gene026670:CDS |
| AGATGCATATGGAAACCCTG+TGG | 0.774336 | 1.2:-15407116 | MS.gene026670:CDS |
| TCTCAGACAAAAGACCTGGG+CGG | 0.775644 | 1.2:+15409651 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATGAATAAAAAAATTGATA+AGG | + | chr1.2:15411027-15411046 | None:intergenic | 10.0% |
| !! | AGTAAATATAAAATAAAGAA+TGG | + | chr1.2:15409563-15409582 | None:intergenic | 10.0% |
| !!! | AGAATTAATTAATTATTTTG+AGG | + | chr1.2:15407519-15407538 | None:intergenic | 10.0% |
| !!! | TTTACAGTAATATTTTAAAT+CGG | - | chr1.2:15409607-15409626 | MS.gene026670:CDS | 10.0% |
| !!! | TTTTTTTTTTTTTCTGTTTT+TGG | + | chr1.2:15407641-15407660 | None:intergenic | 10.0% |
| !! | AAATTAATTGACAAAATTTG+AGG | - | chr1.2:15410315-15410334 | MS.gene026670:intron | 15.0% |
| !! | AACTATTACTAAAAAAGATA+AGG | - | chr1.2:15410535-15410554 | MS.gene026670:intron | 15.0% |
| !! | TTGTTTGCTTAATTAAAATA+TGG | - | chr1.2:15408213-15408232 | MS.gene026670:CDS | 15.0% |
| !!! | ATAATTTTATTAGTTTTCGA+CGG | - | chr1.2:15411075-15411094 | MS.gene026670:intron | 15.0% |
| !!! | ATTAATTCTAACATTTTTCA+TGG | - | chr1.2:15407530-15407549 | MS.gene026670:intron | 15.0% |
| !!! | TTAAACTCTAAAAAAATTGA+CGG | - | chr1.2:15407092-15407111 | MS.gene026670:CDS | 15.0% |
| !!! | TTGTTTTCAAATTTTTGTAT+AGG | + | chr1.2:15409818-15409837 | None:intergenic | 15.0% |
| !!! | TTTTTTATTCCTAGTAAATT+AGG | - | chr1.2:15407885-15407904 | MS.gene026670:intron | 15.0% |
| !! | AAGTTAAATTCAATGATGTT+AGG | + | chr1.2:15407693-15407712 | None:intergenic | 20.0% |
| !! | AGGTTCAAAATGTATTAATT+TGG | + | chr1.2:15410750-15410769 | None:intergenic | 20.0% |
| !! | ATGAAATAAACTAATGATGA+TGG | + | chr1.2:15407936-15407955 | None:intergenic | 20.0% |
| !! | GAAAGAACAAAAATAAGAAT+TGG | + | chr1.2:15408567-15408586 | None:intergenic | 20.0% |
| !! | GTTAAATTAAAAGCAAACAA+AGG | + | chr1.2:15409948-15409967 | None:intergenic | 20.0% |
| !!! | AATTATTGACTTCATTGAAA+AGG | - | chr1.2:15408418-15408437 | MS.gene026670:intron | 20.0% |
| !!! | ATTAGTTTATTTCATTTCCA+TGG | - | chr1.2:15407941-15407960 | MS.gene026670:intron | 20.0% |
| !!! | CATCATTGAATTTAACTTAT+TGG | - | chr1.2:15407695-15407714 | MS.gene026670:intron | 20.0% |
| !!! | GTTATTTTTTTGTCAAAACA+AGG | + | chr1.2:15407294-15407313 | None:intergenic | 20.0% |
| !!! | TAATTTTATTAGTTTTCGAC+GGG | - | chr1.2:15411076-15411095 | MS.gene026670:intron | 20.0% |
| !!! | TAGACAATCATGATTTTATA+AGG | + | chr1.2:15410996-15411015 | None:intergenic | 20.0% |
| !!! | TTAAATATTTTGCAGATCAT+TGG | + | chr1.2:15407076-15407095 | None:intergenic | 20.0% |
| ! | AAAACCTAAAAACAAGATGA+AGG | - | chr1.2:15409840-15409859 | MS.gene026670:intron | 25.0% |
| ! | AACAGACTCTAAATATCAAT+TGG | - | chr1.2:15408793-15408812 | MS.gene026670:intron | 25.0% |
| ! | AATACGCTCTATTTCAATAT+TGG | + | chr1.2:15409367-15409386 | None:intergenic | 25.0% |
| ! | AATTTCTTTATTCCTTCCTT+TGG | + | chr1.2:15409736-15409755 | None:intergenic | 25.0% |
| ! | ATAATAATATGCATGATAGC+TGG | + | chr1.2:15411254-15411273 | None:intergenic | 25.0% |
| ! | ATACGCTCTATTTCAATATT+GGG | + | chr1.2:15409366-15409385 | None:intergenic | 25.0% |
| ! | CTAGTTGTGAACATTTAAAT+AGG | - | chr1.2:15408870-15408889 | MS.gene026670:intron | 25.0% |
| ! | GTTCTTGTAAAAAAGACTAA+GGG | - | chr1.2:15409765-15409784 | MS.gene026670:CDS | 25.0% |
| ! | TAGGGACTGTAATTAATTAA+TGG | - | chr1.2:15411180-15411199 | MS.gene026670:CDS | 25.0% |
| ! | TCAAGTAAGACAAATCTTTA+GGG | - | chr1.2:15409630-15409649 | MS.gene026670:CDS | 25.0% |
| ! | TGTTCTTGTAAAAAAGACTA+AGG | - | chr1.2:15409764-15409783 | MS.gene026670:CDS | 25.0% |
| ! | TTGTTGCATATGCAAATATT+GGG | - | chr1.2:15408243-15408262 | MS.gene026670:CDS | 25.0% |
| ! | TTTGTTGCATATGCAAATAT+TGG | - | chr1.2:15408242-15408261 | MS.gene026670:CDS | 25.0% |
| !! | AAAACAAGCATTGTATTTCA+AGG | + | chr1.2:15407048-15407067 | None:intergenic | 25.0% |
| !! | AAACAAGCATTGTATTTCAA+GGG | + | chr1.2:15407047-15407066 | None:intergenic | 25.0% |
| !! | AGTAACAGTATGATGATTTT+TGG | - | chr1.2:15407132-15407151 | MS.gene026670:CDS | 25.0% |
| !! | ATGTTTGAAGTATGTAGTAA+GGG | - | chr1.2:15410257-15410276 | MS.gene026670:CDS | 25.0% |
| !! | ATTTTATAGCTACTCTAGTT+TGG | - | chr1.2:15410001-15410020 | MS.gene026670:intron | 25.0% |
| !! | GACATGCTTTTAATAAGATA+TGG | - | chr1.2:15408472-15408491 | MS.gene026670:intron | 25.0% |
| !! | TATGTTTGAAGTATGTAGTA+AGG | - | chr1.2:15410256-15410275 | MS.gene026670:CDS | 25.0% |
| !! | TGAAGGTTTTGCAATTAAAA+CGG | - | chr1.2:15409857-15409876 | MS.gene026670:intron | 25.0% |
| !! | TTGATATTTAGAGTCTGTTT+AGG | + | chr1.2:15408792-15408811 | None:intergenic | 25.0% |
| !! | TTTCTGAAAAAGTTGATCAT+AGG | + | chr1.2:15407754-15407773 | None:intergenic | 25.0% |
| !! | TTTTGCAATTAAAACGGAAA+AGG | - | chr1.2:15409863-15409882 | MS.gene026670:intron | 25.0% |
| !!! | AAAACCTTCATCTTGTTTTT+AGG | + | chr1.2:15409847-15409866 | None:intergenic | 25.0% |
| !!! | TAAGTTGATGTAATATCGAA+TGG | - | chr1.2:15407978-15407997 | MS.gene026670:intron | 25.0% |
| AAAAGATAAGGATGAACTTC+TGG | - | chr1.2:15410547-15410566 | MS.gene026670:CDS | 30.0% | |
| AAAGCTTACATATCTTCTGA+TGG | - | chr1.2:15408098-15408117 | MS.gene026670:intron | 30.0% | |
| AACTATGAACACTATCAGTA+AGG | + | chr1.2:15408720-15408739 | None:intergenic | 30.0% | |
| AAGAACACATATGAAGCTAT+GGG | + | chr1.2:15410654-15410673 | None:intergenic | 30.0% | |
| AAGTCTTTCATGCTCTATTA+TGG | - | chr1.2:15410588-15410607 | MS.gene026670:CDS | 30.0% | |
| AATCATGCTACCATATACTT+AGG | + | chr1.2:15408542-15408561 | None:intergenic | 30.0% | |
| AATGTTTGGCCTAATTTACT+AGG | + | chr1.2:15407897-15407916 | None:intergenic | 30.0% | |
| ACTATGAACACTATCAGTAA+GGG | + | chr1.2:15408719-15408738 | None:intergenic | 30.0% | |
| AGTAAATTAGGCCAAACATT+AGG | - | chr1.2:15407897-15407916 | MS.gene026670:intron | 30.0% | |
| AGTTGTCTCATAAACTATCT+TGG | + | chr1.2:15410144-15410163 | None:intergenic | 30.0% | |
| ATAACTAGTCCTTTGTTACA+AGG | - | chr1.2:15407309-15407328 | MS.gene026670:intron | 30.0% | |
| ATATCTTACAGGACTATAGA+TGG | - | chr1.2:15411117-15411136 | MS.gene026670:intron | 30.0% | |
| ATCAGAAGATATGTAAGCTT+TGG | + | chr1.2:15408099-15408118 | None:intergenic | 30.0% | |
| ATGAACAGTATTTCATGTCA+CGG | - | chr1.2:15408364-15408383 | MS.gene026670:intron | 30.0% | |
| ATTTAGCAATTCACTGAAAG+TGG | + | chr1.2:15407862-15407881 | None:intergenic | 30.0% | |
| CAGAATTTATAAACACAGCT+AGG | - | chr1.2:15408670-15408689 | MS.gene026670:intron | 30.0% | |
| CCTGTAAGATATAAAAACTC+TGG | + | chr1.2:15411109-15411128 | None:intergenic | 30.0% | |
| GATTTGAATGATATTACGTG+TGG | + | chr1.2:15410923-15410942 | None:intergenic | 30.0% | |
| GGAAAAGAAACCTAAGTATA+TGG | - | chr1.2:15408529-15408548 | MS.gene026670:intron | 30.0% | |
| GGGATAAACAACTTAATCTT+CGG | + | chr1.2:15410221-15410240 | None:intergenic | 30.0% | |
| GTCAAGTAAGACAAATCTTT+AGG | - | chr1.2:15409629-15409648 | MS.gene026670:CDS | 30.0% | |
| GTTCAAGGATCAAAACATTA+GGG | + | chr1.2:15409921-15409940 | None:intergenic | 30.0% | |
| TAGCAAACAAAAATATTGCG+AGG | - | chr1.2:15409691-15409710 | MS.gene026670:CDS | 30.0% | |
| TATTGAAATAGAGCGTATTG+AGG | - | chr1.2:15409368-15409387 | MS.gene026670:CDS | 30.0% | |
| TATTTCAAGGGAAGTTAACA+GGG | + | chr1.2:15407035-15407054 | None:intergenic | 30.0% | |
| TCAAAACATTAGGGTTTGTA+TGG | + | chr1.2:15409912-15409931 | None:intergenic | 30.0% | |
| TGAACATTTAAATAGGCTCT+AGG | - | chr1.2:15408877-15408896 | MS.gene026670:intron | 30.0% | |
| TGTAATGCACTTACAATCTT+TGG | - | chr1.2:15408646-15408665 | MS.gene026670:intron | 30.0% | |
| TTATCTACATGTGAAAACCA+TGG | + | chr1.2:15407961-15407980 | None:intergenic | 30.0% | |
| TTGTTGATGTGGTAATTCTT+AGG | - | chr1.2:15410370-15410389 | MS.gene026670:intron | 30.0% | |
| ! | ATTAAGTTGTTTATCCCATC+AGG | - | chr1.2:15410224-15410243 | MS.gene026670:intron | 30.0% |
| ! | CCAGAGTTTTTATATCTTAC+AGG | - | chr1.2:15411106-15411125 | MS.gene026670:intron | 30.0% |
| ! | CTTTGGTAATTATGAAGTCA+AGG | + | chr1.2:15408082-15408101 | None:intergenic | 30.0% |
| ! | TGAACTATCGTGATTTTGTA+GGG | - | chr1.2:15411162-15411181 | MS.gene026670:intron | 30.0% |
| ! | TTAAGTTGTTTATCCCATCA+GGG | - | chr1.2:15410225-15410244 | MS.gene026670:intron | 30.0% |
| ! | TTCACAACTAGTTGATACAA+GGG | + | chr1.2:15408861-15408880 | None:intergenic | 30.0% |
| ! | TTGAACTATCGTGATTTTGT+AGG | - | chr1.2:15411161-15411180 | MS.gene026670:intron | 30.0% |
| ! | TTTGAGGTAGAATGACAAAA+TGG | - | chr1.2:15410331-15410350 | MS.gene026670:intron | 30.0% |
| !! | AGTAGGCTTTATCTTTGTTT+TGG | - | chr1.2:15408508-15408527 | MS.gene026670:intron | 30.0% |
| !! | GCATTTAATTTTATGCTCTG+CGG | + | chr1.2:15407247-15407266 | None:intergenic | 30.0% |
| !! | GGTAAAAGTTTTATAGACCA+AGG | - | chr1.2:15411138-15411157 | MS.gene026670:intron | 30.0% |
| AAATCACGATAGTTCAACCT+TGG | + | chr1.2:15411158-15411177 | None:intergenic | 35.0% | |
| AACATAGTATTAGTCCCTGA+TGG | + | chr1.2:15410242-15410261 | None:intergenic | 35.0% | |
| AAGGGAATTTCTACTGTGTT+TGG | + | chr1.2:15408701-15408720 | None:intergenic | 35.0% | |
| AAGTGCATTACACACTCAAA+AGG | + | chr1.2:15408638-15408657 | None:intergenic | 35.0% | |
| AATGGTACGGTATACATACA+TGG | - | chr1.2:15410795-15410814 | MS.gene026670:intron | 35.0% | |
| ACATAGTATTAGTCCCTGAT+GGG | + | chr1.2:15410241-15410260 | None:intergenic | 35.0% | |
| ACATATCTTCTGATGGTAGT+TGG | - | chr1.2:15408105-15408124 | MS.gene026670:intron | 35.0% | |
| AGAACACATATGAAGCTATG+GGG | + | chr1.2:15410653-15410672 | None:intergenic | 35.0% | |
| AGAACAGCTTAACAGTTTGT+AGG | - | chr1.2:15411467-15411486 | MS.gene026670:intron | 35.0% | |
| AGCATGTCAGATAAAAATCG+AGG | + | chr1.2:15408460-15408479 | None:intergenic | 35.0% | |
| AGTCTGTTTAGGAAATAGCA+GGG | + | chr1.2:15408781-15408800 | None:intergenic | 35.0% | |
| AGTGCATTACACACTCAAAA+GGG | + | chr1.2:15408637-15408656 | None:intergenic | 35.0% | |
| ATAGAGCGTATTGAGGAAAA+AGG | - | chr1.2:15409375-15409394 | MS.gene026670:CDS | 35.0% | |
| ATATCTCAGACAAAAGACCT+GGG | + | chr1.2:15409011-15409030 | None:intergenic | 35.0% | |
| ATGGTACGGTATACATACAT+GGG | - | chr1.2:15410796-15410815 | MS.gene026670:intron | 35.0% | |
| ATTTAGTCCTTTCTCTCCTA+TGG | + | chr1.2:15411506-15411525 | None:intergenic | 35.0% | |
| CAATGATGTTCATATCCACA+GGG | + | chr1.2:15411558-15411577 | None:intergenic | 35.0% | |
| CCATATACCTCAATTTCACA+AGG | + | chr1.2:15407379-15407398 | None:intergenic | 35.0% | |
| CCTTGTGAAATTGAGGTATA+TGG | - | chr1.2:15407376-15407395 | MS.gene026670:intron | 35.0% | |
| CGTTCAAGGATCAAAACATT+AGG | + | chr1.2:15409922-15409941 | None:intergenic | 35.0% | |
| CTAGAGTAAGCTTCTTCTTT+GGG | - | chr1.2:15411671-15411690 | MS.gene026670:CDS | 35.0% | |
| CTATTATGGAACTTGGTTTC+TGG | - | chr1.2:15410602-15410621 | MS.gene026670:CDS | 35.0% | |
| CTGTTGCATCATTGACATAA+AGG | + | chr1.2:15409110-15409129 | None:intergenic | 35.0% | |
| GAACAGCTTAACAGTTTGTA+GGG | - | chr1.2:15411468-15411487 | MS.gene026670:intron | 35.0% | |
| GAAGAACACATATGAAGCTA+TGG | + | chr1.2:15410655-15410674 | None:intergenic | 35.0% | |
| GATATTACGTGTGGAGTATA+AGG | + | chr1.2:15410914-15410933 | None:intergenic | 35.0% | |
| GCTTATTTGAGCTTATCTAC+TGG | - | chr1.2:15410028-15410047 | MS.gene026670:intron | 35.0% | |
| GTATTTCAAGGGAAGTTAAC+AGG | + | chr1.2:15407036-15407055 | None:intergenic | 35.0% | |
| GTGAAATTGAGGTATATGGT+GGG | - | chr1.2:15407380-15407399 | MS.gene026670:intron | 35.0% | |
| TAGCACTTGTGAAACTGTTT+GGG | - | chr1.2:15410054-15410073 | MS.gene026670:intron | 35.0% | |
| TATCAGCAAACAACATTTGG+TGG | + | chr1.2:15409278-15409297 | None:intergenic | 35.0% | |
| TATTCAAAGAAGAGTAAGCG+AGG | - | chr1.2:15410475-15410494 | MS.gene026670:intron | 35.0% | |
| TCAATGATGTTCATATCCAC+AGG | + | chr1.2:15411559-15411578 | None:intergenic | 35.0% | |
| TCATACTCAGGATCAAAGTA+TGG | + | chr1.2:15406979-15406998 | None:intergenic | 35.0% | |
| TCATGCTCTATTATGGAACT+TGG | - | chr1.2:15410595-15410614 | MS.gene026670:CDS | 35.0% | |
| TCGAGCATAAATATGACTGA+TGG | + | chr1.2:15411231-15411250 | None:intergenic | 35.0% | |
| TCTCATAAACTATCTTGGAG+AGG | + | chr1.2:15410139-15410158 | None:intergenic | 35.0% | |
| TGTAGACTAAGTTGTTGATG+TGG | - | chr1.2:15410359-15410378 | MS.gene026670:intron | 35.0% | |
| TGTGAAATTGAGGTATATGG+TGG | - | chr1.2:15407379-15407398 | MS.gene026670:intron | 35.0% | |
| TTACACTCCTTGTGAAATTG+AGG | - | chr1.2:15407369-15407388 | MS.gene026670:intron | 35.0% | |
| TTAGCACTTGTGAAACTGTT+TGG | - | chr1.2:15410053-15410072 | MS.gene026670:intron | 35.0% | |
| TTAGTGTGAGATGCAAAGAT+CGG | - | chr1.2:15409409-15409428 | MS.gene026670:CDS | 35.0% | |
| TTCTATGTGAGAGATGCATA+TGG | - | chr1.2:15411529-15411548 | MS.gene026670:intron | 35.0% | |
| ! | ACCAAATGTTGTTTGCTGAT+AGG | - | chr1.2:15409277-15409296 | MS.gene026670:CDS | 35.0% |
| ! | ATAGCTACTCTAGTTTGGAT+TGG | - | chr1.2:15410006-15410025 | MS.gene026670:intron | 35.0% |
| ! | ATGGTAGCAATGCTTTTAGT+AGG | - | chr1.2:15408491-15408510 | MS.gene026670:intron | 35.0% |
| ! | CCAAATGTTGTTTGCTGATA+GGG | - | chr1.2:15409278-15409297 | MS.gene026670:CDS | 35.0% |
| ! | GTTCACAACTAGTTGATACA+AGG | + | chr1.2:15408862-15408881 | None:intergenic | 35.0% |
| ! | TTCTGATGGTAGTTGGTTTA+TGG | - | chr1.2:15408112-15408131 | MS.gene026670:intron | 35.0% |
| ! | TTTGAAGTATGTAGTAAGGG+AGG | - | chr1.2:15410260-15410279 | MS.gene026670:CDS | 35.0% |
| !! | AAACTCTGTTTCTAATTCGC+AGG | - | chr1.2:15407440-15407459 | MS.gene026670:intron | 35.0% |
| !! | AACTCTGTTTCTAATTCGCA+GGG | - | chr1.2:15407441-15407460 | MS.gene026670:intron | 35.0% |
| !! | ATTCTTAGGAGTACTTCATC+AGG | - | chr1.2:15410384-15410403 | MS.gene026670:intron | 35.0% |
| !! | ATTGATAGCGTCAATAAACC+CGG | - | chr1.2:15408023-15408042 | MS.gene026670:intron | 35.0% |
| !! | TTCTGGCTTAATGTTTCTCT+TGG | - | chr1.2:15410619-15410638 | MS.gene026670:CDS | 35.0% |
| !! | TTGTTTTGTTGCGAATGGTA+CGG | - | chr1.2:15410782-15410801 | MS.gene026670:intron | 35.0% |
| !!! | GAGGAATTTTTTAGTTCAGC+TGG | - | chr1.2:15409710-15409729 | MS.gene026670:CDS | 35.0% |
| !!! | TCACTGAAAGTGGTTTTAAC+AGG | + | chr1.2:15407852-15407871 | None:intergenic | 35.0% |
| AATGGCTGTATGATCACCAA+TGG | + | chr1.2:15408968-15408987 | None:intergenic | 40.0% | |
| AGCACGAATGTGTATGTTGT+AGG | + | chr1.2:15408287-15408306 | None:intergenic | 40.0% | |
| ATGCATACCTGTGAAGCATA+AGG | + | chr1.2:15409516-15409535 | None:intergenic | 40.0% | |
| ATGGTCAGATACAATCTGAG+TGG | + | chr1.2:15410830-15410849 | None:intergenic | 40.0% | |
| ATGTGATTGCAGCTGAAGTT+TGG | - | chr1.2:15409058-15409077 | MS.gene026670:intron | 40.0% | |
| CAGAAGAAGTTGCTCGTTTA+TGG | - | chr1.2:15407416-15407435 | MS.gene026670:intron | 40.0% | |
| CAGCTGCAATCACATTGAAT+TGG | + | chr1.2:15409053-15409072 | None:intergenic | 40.0% | |
| CATAAACGAGCAACTTCTTC+TGG | + | chr1.2:15407418-15407437 | None:intergenic | 40.0% | |
| CATCGTATCCACCAATGAAT+CGG | - | chr1.2:15410847-15410866 | MS.gene026670:intron | 40.0% | |
| CCATGATTGTACACTGATCA+AGG | - | chr1.2:15407486-15407505 | MS.gene026670:intron | 40.0% | |
| CCCTATCAGCAAACAACATT+TGG | + | chr1.2:15409281-15409300 | None:intergenic | 40.0% | |
| CCTTGATCAGTGTACAATCA+TGG | + | chr1.2:15407489-15407508 | None:intergenic | 40.0% | |
| CTGAAGTTTGGACTCATAAC+AGG | - | chr1.2:15409070-15409089 | MS.gene026670:intron | 40.0% | |
| GAATGTGTATGTTGTAGGCA+AGG | + | chr1.2:15408282-15408301 | None:intergenic | 40.0% | |
| GAGTCTGTTTAGGAAATAGC+AGG | + | chr1.2:15408782-15408801 | None:intergenic | 40.0% | |
| GATATCTCAGACAAAAGACC+TGG | + | chr1.2:15409012-15409031 | None:intergenic | 40.0% | |
| GCGAATCAAGACTCAAAATG+CGG | + | chr1.2:15407556-15407575 | None:intergenic | 40.0% | |
| GCTAGAGTAAGCTTCTTCTT+TGG | - | chr1.2:15411670-15411689 | MS.gene026670:CDS | 40.0% | |
| GTGCATTACACACTCAAAAG+GGG | + | chr1.2:15408636-15408655 | None:intergenic | 40.0% | |
| TAGTGTGAGATGCAAAGATC+GGG | - | chr1.2:15409410-15409429 | MS.gene026670:CDS | 40.0% | |
| TCAATATTGGGCCTGAAAGA+GGG | + | chr1.2:15409354-15409373 | None:intergenic | 40.0% | |
| TGACATCGACCTTGTAACAA+AGG | + | chr1.2:15407321-15407340 | None:intergenic | 40.0% | |
| TGGTACGGTATACATACATG+GGG | - | chr1.2:15410797-15410816 | MS.gene026670:intron | 40.0% | |
| TGTAACCTATGACACCACTA+GGG | + | chr1.2:15407354-15407373 | None:intergenic | 40.0% | |
| TGTGATGGTCAATGTGAAGA+AGG | - | chr1.2:15411606-15411625 | MS.gene026670:intron | 40.0% | |
| TTATGAAGTCAAGGTCTGTC+AGG | + | chr1.2:15408073-15408092 | None:intergenic | 40.0% | |
| TTCAATATTGGGCCTGAAAG+AGG | + | chr1.2:15409355-15409374 | None:intergenic | 40.0% | |
| TTGCTGAAGTTCTCATACTC+AGG | + | chr1.2:15406991-15407010 | None:intergenic | 40.0% | |
| TTGTGAGGATGATGAGAATG+TGG | - | chr1.2:15409200-15409219 | MS.gene026670:CDS | 40.0% | |
| TTTGGTCAACAAAAAGCCAC+AGG | + | chr1.2:15407623-15407642 | None:intergenic | 40.0% | |
| ! | AGTCTTGATTCGCTATCTGA+AGG | - | chr1.2:15407563-15407582 | MS.gene026670:intron | 40.0% |
| ! | CTTCTTCTTTGGGAACTTGT+TGG | - | chr1.2:15411681-15411700 | MS.gene026670:CDS | 40.0% |
| ! | GATGGTAGTTGGTTTATGGA+TGG | - | chr1.2:15408116-15408135 | MS.gene026670:intron | 40.0% |
| !! | AAATAGGCTCTAGGACCAAA+GGG | - | chr1.2:15408886-15408905 | MS.gene026670:intron | 40.0% |
| !! | AACTAATGATGATGGCCACT+TGG | + | chr1.2:15407928-15407947 | None:intergenic | 40.0% |
| !! | ACTAATGATGATGGCCACTT+GGG | + | chr1.2:15407927-15407946 | None:intergenic | 40.0% |
| !! | GAAGCACTGCGTAAAGAAAT+TGG | - | chr1.2:15411577-15411596 | MS.gene026670:intron | 40.0% |
| !! | TAAATAGGCTCTAGGACCAA+AGG | - | chr1.2:15408885-15408904 | MS.gene026670:intron | 40.0% |
| !! | TCTTTGGGAACTTGTTGGAA+AGG | - | chr1.2:15411686-15411705 | MS.gene026670:CDS | 40.0% |
| !!! | TCTGCTTGTTTTGTTGCGAA+TGG | - | chr1.2:15410777-15410796 | MS.gene026670:intron | 40.0% |
| !!! | TTTTTAGTTCAGCTGGCCAA+AGG | - | chr1.2:15409717-15409736 | MS.gene026670:CDS | 40.0% |
| AAACATTAGGCTACCCCAAG+TGG | - | chr1.2:15407910-15407929 | MS.gene026670:intron | 45.0% | |
| AAGTTAACAGGGAACCTTGG+AGG | + | chr1.2:15407024-15407043 | None:intergenic | 45.0% | |
| ACACTGAAGGGGAGAAAGAA+AGG | - | chr1.2:15410429-15410448 | MS.gene026670:intron | 45.0% | |
| ACTTGGGGTAGCCTAATGTT+TGG | + | chr1.2:15407911-15407930 | None:intergenic | 45.0% | |
| AGAAATTGGCCAGACTGTGA+TGG | - | chr1.2:15411591-15411610 | MS.gene026670:intron | 45.0% | |
| AGATGCATATGGAAACCCTG+TGG | - | chr1.2:15411540-15411559 | MS.gene026670:intron | 45.0% | |
| AGCTTAACAGTTTGTAGGGC+AGG | - | chr1.2:15411472-15411491 | MS.gene026670:intron | 45.0% | |
| AGGATGATGAGAATGTGGCT+CGG | - | chr1.2:15409205-15409224 | MS.gene026670:CDS | 45.0% | |
| ATAAGGCCCTTCAGATGAGA+TGG | + | chr1.2:15409499-15409518 | None:intergenic | 45.0% | |
| ATAGCAGGGTAGATACTAGC+AGG | + | chr1.2:15408767-15408786 | None:intergenic | 45.0% | |
| ATCCACCAATGAATCGGTGA+CGG | - | chr1.2:15410853-15410872 | MS.gene026670:intron | 45.0% | |
| ATGCACACTTGACACTGAAG+GGG | - | chr1.2:15410418-15410437 | MS.gene026670:intron | 45.0% | |
| ATGCCTCCATCTCATCTGAA+GGG | - | chr1.2:15409490-15409509 | MS.gene026670:CDS | 45.0% | |
| CAAAACAAGCAGATAGCTGC+AGG | + | chr1.2:15410770-15410789 | None:intergenic | 45.0% | |
| CAAGTGACGTAAAACTCCAG+TGG | + | chr1.2:15407597-15407616 | None:intergenic | 45.0% | |
| CAATAAACCCGGAATTCTGC+TGG | - | chr1.2:15408034-15408053 | MS.gene026670:intron | 45.0% | |
| CACTGAAGGGGAGAAAGAAA+GGG | - | chr1.2:15410430-15410449 | MS.gene026670:intron | 45.0% | |
| CATACAGCCATTGAGCTCAT+TGG | - | chr1.2:15408976-15408995 | MS.gene026670:intron | 45.0% | |
| GATGCACACTTGACACTGAA+GGG | - | chr1.2:15410417-15410436 | MS.gene026670:intron | 45.0% | |
| GCAAACAAAGGATGCGTTCA+AGG | + | chr1.2:15409936-15409955 | None:intergenic | 45.0% | |
| GCAACAGAATCAATCCTCCA+AGG | - | chr1.2:15407007-15407026 | MS.gene026670:CDS | 45.0% | |
| GTCATCAGTTCAATCCCTAG+TGG | - | chr1.2:15407337-15407356 | MS.gene026670:intron | 45.0% | |
| GTCGTTACCATTGATCCTCT+GGG | - | chr1.2:15411362-15411381 | MS.gene026670:intron | 45.0% | |
| GTGTAACCTATGACACCACT+AGG | + | chr1.2:15407355-15407374 | None:intergenic | 45.0% | |
| GTGTCAACCATAGGAGAGAA+AGG | - | chr1.2:15411496-15411515 | MS.gene026670:intron | 45.0% | |
| TACACACTCAAAAGGGGAGA+CGG | + | chr1.2:15408630-15408649 | None:intergenic | 45.0% | |
| TCACATTGACCATCACAGTC+TGG | + | chr1.2:15411603-15411622 | None:intergenic | 45.0% | |
| TCTAATTCGCAGGGTCTCTA+TGG | - | chr1.2:15407450-15407469 | MS.gene026670:intron | 45.0% | |
| TGAAGAGTTGGGAAGGCAAA+CGG | - | chr1.2:15408929-15408948 | MS.gene026670:intron | 45.0% | |
| TGAGGAAAAAGGCTACTCAG+TGG | - | chr1.2:15409386-15409405 | MS.gene026670:CDS | 45.0% | |
| TGATGCAACAGATCAAGCTG+TGG | - | chr1.2:15409119-15409138 | MS.gene026670:intron | 45.0% | |
| TGTCGTTACCATTGATCCTC+TGG | - | chr1.2:15411361-15411380 | MS.gene026670:intron | 45.0% | |
| TGTCTGCACTCTTACTGACA+TGG | - | chr1.2:15409452-15409471 | MS.gene026670:CDS | 45.0% | |
| TGTTGTAGGCAAGGTTTGCA+TGG | + | chr1.2:15408273-15408292 | None:intergenic | 45.0% | |
| TTTACGTCACTTGTGTCCTG+TGG | - | chr1.2:15407604-15407623 | MS.gene026670:intron | 45.0% | |
| TTTCATGTCACGGATCAGCA+AGG | - | chr1.2:15408374-15408393 | MS.gene026670:intron | 45.0% | |
| ! | AATGAATCGGTGACGGTTGA+TGG | - | chr1.2:15410860-15410879 | MS.gene026670:intron | 45.0% |
| ! | CGATTCATTGGTGGATACGA+TGG | + | chr1.2:15410849-15410868 | None:intergenic | 45.0% |
| ! | GATAGGGATTATGAGAGTGC+TGG | - | chr1.2:15409294-15409313 | MS.gene026670:CDS | 45.0% |
| !! | ATCAACCGTCACCGATTCAT+TGG | + | chr1.2:15410861-15410880 | None:intergenic | 45.0% |
| !! | CTAATGATGATGGCCACTTG+GGG | + | chr1.2:15407926-15407945 | None:intergenic | 45.0% |
| !! | TCAATCCCTAGTGGTGTCAT+AGG | - | chr1.2:15407346-15407365 | MS.gene026670:intron | 45.0% |
| AAGCTCAACCACATCCTTCG+TGG | - | chr1.2:15409177-15409196 | MS.gene026670:CDS | 50.0% | |
| ACACACTCAAAAGGGGAGAC+GGG | + | chr1.2:15408629-15408648 | None:intergenic | 50.0% | |
| ACCAGAAACGTCTCGAGGAT+GGG | - | chr1.2:15411648-15411667 | MS.gene026670:intron | 50.0% | |
| ACCATTGATCCTCTGGGTGA+TGG | - | chr1.2:15411368-15411387 | MS.gene026670:intron | 50.0% | |
| ACGACTTCCAGCAGAATTCC+GGG | + | chr1.2:15408044-15408063 | None:intergenic | 50.0% | |
| AGACGGGTGTAGTGCTTAAC+TGG | + | chr1.2:15408613-15408632 | None:intergenic | 50.0% | |
| ATATTGGGCCTGAAAGAGGG+AGG | + | chr1.2:15409351-15409370 | None:intergenic | 50.0% | |
| CACGACTTCCAGCAGAATTC+CGG | + | chr1.2:15408045-15408064 | None:intergenic | 50.0% | |
| CATCATCCTCACAACCACGA+AGG | + | chr1.2:15409194-15409213 | None:intergenic | 50.0% | |
| CATGCCTCCATCTCATCTGA+AGG | - | chr1.2:15409489-15409508 | MS.gene026670:CDS | 50.0% | |
| CATTGAATTGGAAGCTCGCC+AGG | + | chr1.2:15409041-15409060 | None:intergenic | 50.0% | |
| CCCAACTCTTCACACCTTCT+GGG | + | chr1.2:15408921-15408940 | None:intergenic | 50.0% | |
| CTGTGCGCAAAGGATAGAGT+GGG | - | chr1.2:15411412-15411431 | MS.gene026670:intron | 50.0% | |
| GAAGAGTTGGGAAGGCAAAC+GGG | - | chr1.2:15408930-15408949 | MS.gene026670:intron | 50.0% | |
| GACGTAAAACTCCAGTGGCT+AGG | + | chr1.2:15407592-15407611 | None:intergenic | 50.0% | |
| GGATGCACACTTGACACTGA+AGG | - | chr1.2:15410416-15410435 | MS.gene026670:intron | 50.0% | |
| GGGAAGTTAACAGGGAACCT+TGG | + | chr1.2:15407027-15407046 | None:intergenic | 50.0% | |
| GGTGAAACCCATGGAGAAAC+TGG | + | chr1.2:15409232-15409251 | None:intergenic | 50.0% | |
| TACTTCATCAGGCACGTGGA+TGG | - | chr1.2:15410395-15410414 | MS.gene026670:intron | 50.0% | |
| TAGTTCAGCTGGCCAAAGGA+AGG | - | chr1.2:15409721-15409740 | MS.gene026670:CDS | 50.0% | |
| TATCCTTTGCGCACAGCTCA+AGG | + | chr1.2:15411408-15411427 | None:intergenic | 50.0% | |
| TCCATCACCCAGAGGATCAA+TGG | + | chr1.2:15411372-15411391 | None:intergenic | 50.0% | |
| TCCCAACTCTTCACACCTTC+TGG | + | chr1.2:15408922-15408941 | None:intergenic | 50.0% | |
| TCTCAGACAAAAGACCTGGG+CGG | + | chr1.2:15409008-15409027 | None:intergenic | 50.0% | |
| TCTGAAGGAAACCTAGCCAC+TGG | - | chr1.2:15407578-15407597 | MS.gene026670:intron | 50.0% | |
| TTGACTCTCCTCCCTCTTTC+AGG | - | chr1.2:15409340-15409359 | MS.gene026670:CDS | 50.0% | |
| ! | AAAGCACCAGAAACGTCTCG+AGG | - | chr1.2:15411643-15411662 | MS.gene026670:intron | 50.0% |
| ! | CCCAGAAGGTGTGAAGAGTT+GGG | - | chr1.2:15408918-15408937 | MS.gene026670:intron | 50.0% |
| ! | GAAGGTGTGAAGAGTTGGGA+AGG | - | chr1.2:15408922-15408941 | MS.gene026670:intron | 50.0% |
| ! | GTCTGAGATATCAGCTGTCC+TGG | - | chr1.2:15409020-15409039 | MS.gene026670:intron | 50.0% |
| ! | TGAAGGGCCTTATGCTTCAC+AGG | - | chr1.2:15409506-15409525 | MS.gene026670:CDS | 50.0% |
| !! | AACCGTCACCGATTCATTGG+TGG | + | chr1.2:15410858-15410877 | None:intergenic | 50.0% |
| !! | AGGGATTATGAGAGTGCTGG+TGG | - | chr1.2:15409297-15409316 | MS.gene026670:CDS | 50.0% |
| !! | CGTTTCTGGTGCTTTGGTGT+TGG | + | chr1.2:15411638-15411657 | None:intergenic | 50.0% |
| !! | GCTTGCTGTCTGAAGTGACT+AGG | - | chr1.2:15411434-15411453 | MS.gene026670:intron | 50.0% |
| !! | TCGAGACGTTTCTGGTGCTT+TGG | + | chr1.2:15411644-15411663 | None:intergenic | 50.0% |
| AGCCATTGAGCTCATTGGCC+GGG | - | chr1.2:15408981-15409000 | MS.gene026670:intron | 55.0% | |
| AGGCCCTTCAGATGAGATGG+AGG | + | chr1.2:15409496-15409515 | None:intergenic | 55.0% | |
| AGGGCAGGTGTGTCAACCAT+AGG | - | chr1.2:15411487-15411506 | MS.gene026670:intron | 55.0% | |
| AGTTGGGAAGGCAAACGGGT+TGG | - | chr1.2:15408934-15408953 | MS.gene026670:intron | 55.0% | |
| CACCAGAAACGTCTCGAGGA+TGG | - | chr1.2:15411647-15411666 | MS.gene026670:intron | 55.0% | |
| CAGCCATTGAGCTCATTGGC+CGG | - | chr1.2:15408980-15408999 | MS.gene026670:intron | 55.0% | |
| CCACATCCTTCGTGGTTGTG+AGG | - | chr1.2:15409185-15409204 | MS.gene026670:CDS | 55.0% | |
| CCTCACAACCACGAAGGATG+TGG | + | chr1.2:15409188-15409207 | None:intergenic | 55.0% | |
| CCTTCACCCACATGGACAGA+AGG | - | chr1.2:15409250-15409269 | MS.gene026670:CDS | 55.0% | |
| CCTTCTGTCCATGTGGGTGA+AGG | + | chr1.2:15409253-15409272 | None:intergenic | 55.0% | |
| GCTCGGACCAGTTTCTCCAT+GGG | - | chr1.2:15409222-15409241 | MS.gene026670:CDS | 55.0% | |
| GCTGTGCGCAAAGGATAGAG+TGG | - | chr1.2:15411411-15411430 | MS.gene026670:intron | 55.0% | |
| GGGTTTCACCTTCACCCACA+TGG | - | chr1.2:15409242-15409261 | MS.gene026670:CDS | 55.0% | |
| GTGGAGCCTTCTGTCCATGT+GGG | + | chr1.2:15409259-15409278 | None:intergenic | 55.0% | |
| GTGGGTGAAGGTGAAACCCA+TGG | + | chr1.2:15409241-15409260 | None:intergenic | 55.0% | |
| TCACACCTTCTGGGCTCTTG+CGG | + | chr1.2:15408912-15408931 | None:intergenic | 55.0% | |
| ! | GCCCAGAAGGTGTGAAGAGT+TGG | - | chr1.2:15408917-15408936 | MS.gene026670:intron | 55.0% |
| ! | GGAGTACTTCATCAGGCACG+TGG | - | chr1.2:15410391-15410410 | MS.gene026670:intron | 55.0% |
| !! | ATCCTCTGGGTGATGGACAC+AGG | - | chr1.2:15411375-15411394 | MS.gene026670:intron | 55.0% |
| !! | CGGGTTGGCATTCACTCCAT+TGG | - | chr1.2:15408949-15408968 | MS.gene026670:intron | 55.0% |
| !! | TCCTCTGGGTGATGGACACA+GGG | - | chr1.2:15411376-15411395 | MS.gene026670:intron | 55.0% |
| !! | TCTGGTGCTTTGGTGTTGGC+TGG | + | chr1.2:15411634-15411653 | None:intergenic | 55.0% |
| ACAAAAGACCTGGGCGGTCC+CGG | + | chr1.2:15409002-15409021 | None:intergenic | 60.0% | |
| ACCCTGTGTCCATCACCCAG+AGG | + | chr1.2:15411380-15411399 | None:intergenic | 60.0% | |
| GAGCCTTGAGCTGTGCGCAA+AGG | - | chr1.2:15411402-15411421 | MS.gene026670:intron | 60.0% | |
| GCCCATCCTCGAGACGTTTC+TGG | + | chr1.2:15411652-15411671 | None:intergenic | 60.0% | |
| GGCTCGGACCAGTTTCTCCA+TGG | - | chr1.2:15409221-15409240 | MS.gene026670:CDS | 60.0% | |
| GGTGGAGCCTTCTGTCCATG+TGG | + | chr1.2:15409260-15409279 | None:intergenic | 60.0% | |
| GTCCCGGCCAATGAGCTCAA+TGG | + | chr1.2:15408986-15409005 | None:intergenic | 60.0% | |
| AAGGGCCGCAAGAGCCCAGA+AGG | - | chr1.2:15408904-15408923 | MS.gene026670:intron | 65.0% | |
| TCTGGGCTCTTGCGGCCCTT+TGG | + | chr1.2:15408904-15408923 | None:intergenic | 65.0% | |
| CTCATTGGCCGGGACCGCCC+AGG | - | chr1.2:15408991-15409010 | MS.gene026670:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.2 | gene | 15406958 | 15411720 | 15406958 | ID=MS.gene026670 |
| chr1.2 | mRNA | 15406958 | 15411720 | 15406958 | ID=MS.gene026670.t1;Parent=MS.gene026670 |
| chr1.2 | exon | 15411650 | 15411720 | 15411650 | ID=MS.gene026670.t1.exon1;Parent=MS.gene026670.t1 |
| chr1.2 | CDS | 15411650 | 15411720 | 15411650 | ID=cds.MS.gene026670.t1;Parent=MS.gene026670.t1 |
| chr1.2 | exon | 15411171 | 15411216 | 15411171 | ID=MS.gene026670.t1.exon2;Parent=MS.gene026670.t1 |
| chr1.2 | CDS | 15411171 | 15411216 | 15411171 | ID=cds.MS.gene026670.t1;Parent=MS.gene026670.t1 |
| chr1.2 | exon | 15410541 | 15410655 | 15410541 | ID=MS.gene026670.t1.exon3;Parent=MS.gene026670.t1 |
| chr1.2 | CDS | 15410541 | 15410655 | 15410541 | ID=cds.MS.gene026670.t1;Parent=MS.gene026670.t1 |
| chr1.2 | exon | 15410239 | 15410306 | 15410239 | ID=MS.gene026670.t1.exon4;Parent=MS.gene026670.t1 |
| chr1.2 | CDS | 15410239 | 15410306 | 15410239 | ID=cds.MS.gene026670.t1;Parent=MS.gene026670.t1 |
| chr1.2 | exon | 15409151 | 15409786 | 15409151 | ID=MS.gene026670.t1.exon5;Parent=MS.gene026670.t1 |
| chr1.2 | CDS | 15409151 | 15409786 | 15409151 | ID=cds.MS.gene026670.t1;Parent=MS.gene026670.t1 |
| chr1.2 | exon | 15408182 | 15408286 | 15408182 | ID=MS.gene026670.t1.exon6;Parent=MS.gene026670.t1 |
| chr1.2 | CDS | 15408182 | 15408286 | 15408182 | ID=cds.MS.gene026670.t1;Parent=MS.gene026670.t1 |
| chr1.2 | exon | 15406958 | 15407281 | 15406958 | ID=MS.gene026670.t1.exon7;Parent=MS.gene026670.t1 |
| chr1.2 | CDS | 15406958 | 15407281 | 15406958 | ID=cds.MS.gene026670.t1;Parent=MS.gene026670.t1 |
| Gene Sequence |
| Protein sequence |
