Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44095.t1 | RHN80765.1 | 98.7 | 447 | 6 | 0 | 1 | 447 | 1 | 447 | 7.80E-251 | 875.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44095.t1 | Q39230 | 74.7 | 451 | 110 | 2 | 1 | 447 | 1 | 451 | 2.8e-196 | 686.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44095.t1 | A0A396JX57 | 98.7 | 447 | 6 | 0 | 1 | 447 | 1 | 447 | 5.6e-251 | 875.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene055573 | MS.gene44095 | 0.924445 | 6.98E-90 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene027585 | MS.gene44095 | PPI |
| MS.gene38588 | MS.gene44095 | PPI |
| MS.gene44095 | MS.gene45075 | PPI |
| MS.gene82886 | MS.gene44095 | PPI |
| MS.gene44095 | MS.gene35246 | PPI |
| MS.gene026998 | MS.gene44095 | PPI |
| MS.gene44095 | MS.gene43889 | PPI |
| MS.gene44095 | MS.gene013131 | PPI |
| MS.gene44095 | MS.gene055486 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44095.t1 | MTR_1g082850 | 99.329 | 447 | 3 | 0 | 1 | 447 | 1 | 447 | 0.0 | 926 |
| MS.gene44095.t1 | MTR_3g099470 | 36.041 | 394 | 233 | 8 | 46 | 426 | 151 | 538 | 2.80e-75 | 245 |
| MS.gene44095.t1 | MTR_7g029025 | 75.641 | 156 | 16 | 2 | 288 | 442 | 123 | 257 | 1.25e-72 | 231 |
| MS.gene44095.t1 | MTR_7g029025 | 84.615 | 130 | 20 | 0 | 1 | 130 | 1 | 130 | 1.17e-60 | 200 |
| MS.gene44095.t1 | MTR_3g099470 | 31.090 | 312 | 207 | 5 | 46 | 355 | 151 | 456 | 3.21e-47 | 169 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44095.t1 | AT5G27470 | 76.497 | 451 | 102 | 3 | 1 | 447 | 1 | 451 | 0.0 | 728 |
| MS.gene44095.t1 | AT1G11870 | 33.738 | 412 | 249 | 8 | 27 | 426 | 106 | 505 | 3.06e-73 | 239 |
| MS.gene44095.t1 | AT1G11870 | 33.738 | 412 | 249 | 8 | 27 | 426 | 104 | 503 | 4.28e-73 | 239 |
| MS.gene44095.t1 | AT1G11870 | 36.313 | 358 | 208 | 7 | 85 | 426 | 18 | 371 | 8.05e-72 | 231 |
| MS.gene44095.t1 | AT1G11870 | 28.655 | 342 | 231 | 5 | 27 | 367 | 106 | 435 | 2.80e-46 | 166 |
| MS.gene44095.t1 | AT1G11870 | 29.204 | 339 | 227 | 5 | 19 | 356 | 98 | 424 | 3.94e-46 | 166 |
| MS.gene44095.t1 | AT1G11870 | 29.530 | 298 | 197 | 5 | 27 | 323 | 106 | 391 | 4.90e-39 | 145 |
Find 103 sgRNAs with CRISPR-Local
Find 277 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTAAAGTTCTTCATCAAAT+TGG | 0.134658 | 1.3:-58413325 | None:intergenic |
| AAACCTCTTGAATTCTAAAT+TGG | 0.181417 | 1.3:+58412272 | MS.gene44095:CDS |
| TGAGATTCACGGATGATTTC+AGG | 0.189941 | 1.3:-58411863 | None:intergenic |
| CAAATTGTTTCCATCGTATC+TGG | 0.244081 | 1.3:+58414850 | MS.gene44095:CDS |
| CCCATGAATCATTATCATTT+GGG | 0.270325 | 1.3:-58414407 | None:intergenic |
| CGTATCGAATTTCTAATTTA+CGG | 0.289372 | 1.3:-58414981 | None:intergenic |
| TTCCCTTTGGCTTCATTGTT+CGG | 0.292118 | 1.3:-58416030 | None:intergenic |
| TCCCATGAATCATTATCATT+TGG | 0.297281 | 1.3:-58414408 | None:intergenic |
| AACCAAGCTCTAATCATGTT+TGG | 0.299701 | 1.3:+58413212 | MS.gene44095:CDS |
| TCTCTACTCCATCCTCCTTC+TGG | 0.313005 | 1.3:-58415948 | None:intergenic |
| GTATCGAATTTCTAATTTAC+GGG | 0.328738 | 1.3:-58414980 | None:intergenic |
| GGCCTTCGATTTCTTCCCTT+TGG | 0.338225 | 1.3:-58416043 | None:intergenic |
| ACCAAGCTCTAATCATGTTT+GGG | 0.343110 | 1.3:+58413213 | MS.gene44095:CDS |
| GTAAAGTTCTTCATCAAATT+GGG | 0.357931 | 1.3:-58413324 | None:intergenic |
| TATGCTTACTCGCTTGAGTT+TGG | 0.360842 | 1.3:-58412092 | None:intergenic |
| GTCCTTAGGCCATTCATGTT+TGG | 0.363259 | 1.3:+58415979 | MS.gene44095:CDS |
| CAATCTCTTCCGTGTAGAAA+AGG | 0.380485 | 1.3:+58411832 | MS.gene44095:CDS |
| TACGATGGAAACAATTTGAT+AGG | 0.382311 | 1.3:-58414845 | None:intergenic |
| TCTCATGGTCGGGATACTTT+AGG | 0.390122 | 1.3:+58414333 | MS.gene44095:CDS |
| TCCACATGATTCTTGAGCTT+CGG | 0.390757 | 1.3:-58412479 | None:intergenic |
| CCCCAAATGATAATGATTCA+TGG | 0.406858 | 1.3:+58414406 | MS.gene44095:CDS |
| AATTCTAAATTGGAAACCAT+TGG | 0.410473 | 1.3:+58412282 | MS.gene44095:CDS |
| GAGATAGCTGATTTGAAGAA+AGG | 0.411201 | 1.3:+58412518 | MS.gene44095:CDS |
| CTTTGGCTTCATTGTTCGGT+TGG | 0.412270 | 1.3:-58416026 | None:intergenic |
| ATGAATGGCCTAAGGACTTC+TGG | 0.414262 | 1.3:-58415973 | None:intergenic |
| ACGTCTTTCTTGATGAAGAA+TGG | 0.419469 | 1.3:-58413278 | None:intergenic |
| GAATTTCTAATTTACGGGCT+TGG | 0.419762 | 1.3:-58414975 | None:intergenic |
| GTAGTCTGTACAATTTGAAC+AGG | 0.430316 | 1.3:-58414953 | None:intergenic |
| TCTTGCTTTCGTAAAGAAGC+TGG | 0.438723 | 1.3:+58414309 | MS.gene44095:CDS |
| TTCCAGCTTCTAAAACATAC+AGG | 0.439898 | 1.3:+58414920 | MS.gene44095:CDS |
| ATGATAGGAGCCGATGTTGC+TGG | 0.453917 | 1.3:+58413149 | MS.gene44095:intron |
| GCCGATGTTGCTGGAGGTAG+AGG | 0.459004 | 1.3:+58413158 | MS.gene44095:CDS |
| TTGTTCGGTTGGTTCTTGAA+TGG | 0.460611 | 1.3:-58416015 | None:intergenic |
| ACTGCTCCACCTTCTCGAAC+TGG | 0.468726 | 1.3:-58414371 | None:intergenic |
| CTTCTTTAGGTAACCGGGGA+AGG | 0.469820 | 1.3:+58414103 | MS.gene44095:intron |
| TTGGGCTAGTTGAGCACACT+TGG | 0.471518 | 1.3:-58413306 | None:intergenic |
| ACAATCTTGTTGTCCGAACA+TGG | 0.475085 | 1.3:+58412438 | MS.gene44095:CDS |
| TAGAGATACCAGAAGTCCTT+AGG | 0.475235 | 1.3:+58415965 | MS.gene44095:CDS |
| TCGGTTGGTTCTTGAATGGC+AGG | 0.477198 | 1.3:-58416011 | None:intergenic |
| CATGCTTGCTGTAGGTATGC+TGG | 0.481103 | 1.3:+58414279 | MS.gene44095:intron |
| GCCCAAACATGATTAGAGCT+TGG | 0.483827 | 1.3:-58413214 | None:intergenic |
| TTATCAATCTCGACAAAGAA+TGG | 0.490410 | 1.3:+58411924 | MS.gene44095:CDS |
| GAGATTCACGGATGATTTCA+GGG | 0.494661 | 1.3:-58411862 | None:intergenic |
| CCTTCTCGAACTGGTGAACT+CGG | 0.504962 | 1.3:-58414362 | None:intergenic |
| ACAAACCTCATCATTGCTGA+TGG | 0.508461 | 1.3:-58412328 | None:intergenic |
| ATTTGATGAAGAACTTTACA+AGG | 0.508998 | 1.3:+58413328 | MS.gene44095:CDS |
| TTCCAAACATGAATGGCCTA+AGG | 0.510108 | 1.3:-58415981 | None:intergenic |
| AATCTCTTCCGTGTAGAAAA+GGG | 0.512839 | 1.3:+58411833 | MS.gene44095:CDS |
| CGAGTTTATTTCTAAATCTG+AGG | 0.522194 | 1.3:+58412200 | MS.gene44095:CDS |
| GTTCTCTAGTATGCAGCAAA+TGG | 0.522458 | 1.3:-58415923 | None:intergenic |
| CAAGTTACCTTAGGGGTAGA+CGG | 0.525382 | 1.3:-58414201 | None:intergenic |
| CGTAAAGAAGCTGGATCTCA+TGG | 0.526898 | 1.3:+58414318 | MS.gene44095:CDS |
| CCCAAATGATAATGATTCAT+GGG | 0.530653 | 1.3:+58414407 | MS.gene44095:CDS |
| AACGACGGCGTTGAGATTCA+CGG | 0.531799 | 1.3:-58411874 | None:intergenic |
| ATCCTACCCGTCTACCCCTA+AGG | 0.539398 | 1.3:+58414194 | MS.gene44095:CDS |
| AATTCGATACGGACAGAAGA+AGG | 0.542480 | 1.3:+58414993 | MS.gene44095:CDS |
| ATACTTATCATCTCCTTCCC+CGG | 0.545996 | 1.3:-58414116 | None:intergenic |
| GAGAACAACCAGAAGGAGGA+TGG | 0.546439 | 1.3:+58415940 | MS.gene44095:CDS |
| AAGTTACCTTAGGGGTAGAC+GGG | 0.552419 | 1.3:-58414200 | None:intergenic |
| AACCGAACAATGAAGCCAAA+GGG | 0.552476 | 1.3:+58416028 | MS.gene44095:CDS |
| CAACCGAACAATGAAGCCAA+AGG | 0.552548 | 1.3:+58416027 | MS.gene44095:CDS |
| ACCTCTACCTCCAGCAACAT+CGG | 0.553887 | 1.3:-58413159 | None:intergenic |
| AGAAGCTGGATCTCATGGTC+GGG | 0.554511 | 1.3:+58414323 | MS.gene44095:CDS |
| TTCGTCAACTACTTCGACGC+TGG | 0.554815 | 1.3:-58411900 | None:intergenic |
| GTGCATATCATTCAGACGAA+TGG | 0.559096 | 1.3:+58414167 | MS.gene44095:CDS |
| AGTTCACCAGTTCGAGAAGG+TGG | 0.559770 | 1.3:+58414365 | MS.gene44095:CDS |
| TTTGTTGAACTCCACTCTCA+CGG | 0.563048 | 1.3:+58415888 | MS.gene44095:CDS |
| TTAGGGGTAGACGGGTAGGA+TGG | 0.567147 | 1.3:-58414192 | None:intergenic |
| CCTTTCAGTAGCCGTGAGAG+TGG | 0.571162 | 1.3:-58415899 | None:intergenic |
| CAATCTTGTTGTCCGAACAT+GGG | 0.572903 | 1.3:+58412439 | MS.gene44095:CDS |
| TTCTAAAACATACAGGGAGT+TGG | 0.576857 | 1.3:+58414927 | MS.gene44095:CDS |
| AAGAAGCTGGATCTCATGGT+CGG | 0.582102 | 1.3:+58414322 | MS.gene44095:CDS |
| ACGATGGAAACAATTTGATA+GGG | 0.582357 | 1.3:-58414844 | None:intergenic |
| GGTTTCTATCTCAAAGGAGA+TGG | 0.585776 | 1.3:+58413179 | MS.gene44095:CDS |
| CTCAGATTTAGAAATAAACT+CGG | 0.588681 | 1.3:-58412199 | None:intergenic |
| CCACTCTCACGGCTACTGAA+AGG | 0.590045 | 1.3:+58415899 | MS.gene44095:CDS |
| CCGAGTTCACCAGTTCGAGA+AGG | 0.591093 | 1.3:+58414362 | MS.gene44095:CDS |
| GGTAGAGGTTTCTATCTCAA+AGG | 0.591210 | 1.3:+58413173 | MS.gene44095:CDS |
| TTTCCAATTTAGAATTCAAG+AGG | 0.592409 | 1.3:-58412275 | None:intergenic |
| ATCATGAACGAGGTTTCCAA+TGG | 0.592505 | 1.3:-58412298 | None:intergenic |
| TGTTCCCATCAGCAATGATG+AGG | 0.598513 | 1.3:+58412323 | MS.gene44095:CDS |
| AATCTTGTTGTCCGAACATG+GGG | 0.604845 | 1.3:+58412440 | MS.gene44095:CDS |
| CCATGAATCATTATCATTTG+GGG | 0.613961 | 1.3:-58414406 | None:intergenic |
| CGTAAATTAGAAATTCGATA+CGG | 0.619082 | 1.3:+58414982 | MS.gene44095:CDS |
| CAAACCTCATCATTGCTGAT+GGG | 0.630129 | 1.3:-58412327 | None:intergenic |
| CTAAATTCAAGTTACCTTAG+GGG | 0.638039 | 1.3:-58414208 | None:intergenic |
| TACCTTAGGGGTAGACGGGT+AGG | 0.642685 | 1.3:-58414196 | None:intergenic |
| TGATTCATGGGACATGCATG+AGG | 0.643636 | 1.3:+58414419 | MS.gene44095:CDS |
| TAGATCATACTTCTTAGCCG+CGG | 0.644071 | 1.3:-58414887 | None:intergenic |
| TCCAGCTTCTAAAACATACA+GGG | 0.644409 | 1.3:+58414921 | MS.gene44095:CDS |
| AGAAGTATGATCTAGAAGCA+TGG | 0.654923 | 1.3:+58414896 | MS.gene44095:CDS |
| GTTCAAAGCTCCAGATACGA+TGG | 0.655676 | 1.3:-58414860 | None:intergenic |
| AGCCAAAGGGAAGAAATCGA+AGG | 0.662628 | 1.3:+58416041 | MS.gene44095:CDS |
| ACCGAAGCTCAAGAATCATG+TGG | 0.667853 | 1.3:+58412478 | MS.gene44095:CDS |
| CTCTGAGGACTTCTACAAAG+CGG | 0.670185 | 1.3:+58414455 | MS.gene44095:CDS |
| ACTAGAGAACAACCAGAAGG+AGG | 0.673239 | 1.3:+58415936 | MS.gene44095:CDS |
| ATAGGAGCCGATGTTGCTGG+AGG | 0.692103 | 1.3:+58413152 | MS.gene44095:intron |
| CTTCGACGCTGGCAAAACGA+CGG | 0.699893 | 1.3:-58411889 | None:intergenic |
| TGGAGCTTTGAACGATGCCG+CGG | 0.704815 | 1.3:+58414870 | MS.gene44095:CDS |
| AGAAGTCAACAAAATCAACA+AGG | 0.710411 | 1.3:+58412063 | MS.gene44095:CDS |
| CATACTAGAGAACAACCAGA+AGG | 0.710513 | 1.3:+58415933 | MS.gene44095:CDS |
| TGGGAACAGAATCATGAACG+AGG | 0.772919 | 1.3:-58412308 | None:intergenic |
| TCTGAATGATATGCACACAG+AGG | 0.783230 | 1.3:-58414160 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATCTAAAAAACAAATTATA+AGG | - | chr1.3:58413470-58413489 | None:intergenic | 10.0% |
| !! | GAAAATAAAAAATAAAAAAG+AGG | - | chr1.3:58414782-58414801 | None:intergenic | 10.0% |
| !! | TACATGTTTAATATTAAAAT+TGG | + | chr1.3:58414232-58414251 | MS.gene44095:intron | 10.0% |
| !! | TTATATAAATTGATATAACA+AGG | - | chr1.3:58415142-58415161 | None:intergenic | 10.0% |
| !! | ATTCCAAAAAAATTTAAACA+AGG | - | chr1.3:58415253-58415272 | None:intergenic | 15.0% |
| !! | CTTATAATTGAATTCTTATA+AGG | - | chr1.3:58413392-58413411 | None:intergenic | 15.0% |
| !! | TTCACTATAATTAATAATGA+CGG | - | chr1.3:58413903-58413922 | None:intergenic | 15.0% |
| !!! | AAGAAGTTTTTATTTTTTTG+TGG | + | chr1.3:58413922-58413941 | MS.gene44095:intron | 15.0% |
| !!! | CACTTTTACATTATATTATA+AGG | - | chr1.3:58412960-58412979 | None:intergenic | 15.0% |
| !!! | GATAATTGTTTTTTAATCTT+GGG | + | chr1.3:58414254-58414273 | MS.gene44095:intron | 15.0% |
| !!! | TATATAATATAGTTTTGGTA+TGG | + | chr1.3:58414541-58414560 | MS.gene44095:intron | 15.0% |
| !!! | TATCCTTGTTTAAATTTTTT+TGG | + | chr1.3:58415247-58415266 | MS.gene44095:intron | 15.0% |
| !!! | TATTCTAAGAATATTAAACA+AGG | - | chr1.3:58415637-58415656 | None:intergenic | 15.0% |
| !! | AATATAAGCAAAACATGATT+AGG | - | chr1.3:58412013-58412032 | None:intergenic | 20.0% |
| !! | ATCATGCATCAAATAAAAAT+AGG | - | chr1.3:58413134-58413153 | None:intergenic | 20.0% |
| !! | CTTTAGATTAATTTAACACT+GGG | - | chr1.3:58414576-58414595 | None:intergenic | 20.0% |
| !!! | AATCATGTTTTGCTTATATT+AGG | + | chr1.3:58412013-58412032 | MS.gene44095:intron | 20.0% |
| !!! | ATTTTTATTTGATGCATGAT+AGG | + | chr1.3:58413134-58413153 | MS.gene44095:intron | 20.0% |
| !!! | CTTTAATATTTTGTGAGATT+TGG | + | chr1.3:58412599-58412618 | MS.gene44095:intron | 20.0% |
| !!! | GCAAATAAAGTTATTGATTT+GGG | - | chr1.3:58414759-58414778 | None:intergenic | 20.0% |
| !!! | GGATAATTGTTTTTTAATCT+TGG | + | chr1.3:58414253-58414272 | MS.gene44095:intron | 20.0% |
| !!! | TTAGAATATTTAGTTTGTGA+TGG | + | chr1.3:58415360-58415379 | MS.gene44095:intron | 20.0% |
| !!! | TTGTTTTCAAATTCAATGTA+TGG | + | chr1.3:58412732-58412751 | MS.gene44095:intron | 20.0% |
| !!! | TTTTTGTATTATACTCTTTC+TGG | + | chr1.3:58413690-58413709 | MS.gene44095:intron | 20.0% |
| ! | AAAATATCAACTATATACCG+AGG | - | chr1.3:58413429-58413448 | None:intergenic | 25.0% |
| ! | AAACCTCTTGAATTCTAAAT+TGG | + | chr1.3:58412272-58412291 | MS.gene44095:CDS | 25.0% |
| ! | AATTCTAAATTGGAAACCAT+TGG | + | chr1.3:58412282-58412301 | MS.gene44095:CDS | 25.0% |
| ! | AATTGTTTCATGTGTGTTAT+AGG | + | chr1.3:58412832-58412851 | MS.gene44095:intron | 25.0% |
| ! | AGAATAAGAGTCATTGAAAA+AGG | + | chr1.3:58413853-58413872 | MS.gene44095:intron | 25.0% |
| ! | AGGAAGAATTTAGAAATTTC+AGG | - | chr1.3:58415560-58415579 | None:intergenic | 25.0% |
| ! | AGTGTTTGTATTGAAATTCA+TGG | + | chr1.3:58412394-58412413 | MS.gene44095:intron | 25.0% |
| ! | AGTTTAACTGCAGAATATAT+TGG | - | chr1.3:58415410-58415429 | None:intergenic | 25.0% |
| ! | ATACCTAAGTTCAATATTGA+TGG | + | chr1.3:58415021-58415040 | MS.gene44095:intron | 25.0% |
| ! | ATATTGCTCAAGTAAAAACA+TGG | - | chr1.3:58415746-58415765 | None:intergenic | 25.0% |
| ! | ATTTATATAACCCATTCTTC+TGG | + | chr1.3:58415152-58415171 | MS.gene44095:intron | 25.0% |
| ! | ATTTGATGAAGAACTTTACA+AGG | + | chr1.3:58413328-58413347 | MS.gene44095:CDS | 25.0% |
| ! | CCAGTGTTAAATTAATCTAA+AGG | + | chr1.3:58414574-58414593 | MS.gene44095:intron | 25.0% |
| ! | CCTTTAGATTAATTTAACAC+TGG | - | chr1.3:58414577-58414596 | None:intergenic | 25.0% |
| ! | CGTAAATTAGAAATTCGATA+CGG | + | chr1.3:58414982-58415001 | MS.gene44095:CDS | 25.0% |
| ! | CGTATCGAATTTCTAATTTA+CGG | - | chr1.3:58414984-58415003 | None:intergenic | 25.0% |
| ! | CTAACATATATGAAGAACTT+GGG | - | chr1.3:58415117-58415136 | None:intergenic | 25.0% |
| ! | CTATTGTACAAATCATGAAT+AGG | - | chr1.3:58412870-58412889 | None:intergenic | 25.0% |
| ! | CTCAGATTTAGAAATAAACT+CGG | - | chr1.3:58412202-58412221 | None:intergenic | 25.0% |
| ! | GTAAAGTTCTTCATCAAATT+GGG | - | chr1.3:58413327-58413346 | None:intergenic | 25.0% |
| ! | GTATCGAATTTCTAATTTAC+GGG | - | chr1.3:58414983-58415002 | None:intergenic | 25.0% |
| ! | GTGTTTGTATTGAAATTCAT+GGG | + | chr1.3:58412395-58412414 | MS.gene44095:intron | 25.0% |
| ! | TAACACACATGAAACAATTA+AGG | - | chr1.3:58412831-58412850 | None:intergenic | 25.0% |
| ! | TACATTTGTATTACATCACT+TGG | + | chr1.3:58414723-58414742 | MS.gene44095:intron | 25.0% |
| ! | TCATTGAAAAAGGAAACTTA+GGG | + | chr1.3:58413863-58413882 | MS.gene44095:intron | 25.0% |
| ! | TCTAACATATATGAAGAACT+TGG | - | chr1.3:58415118-58415137 | None:intergenic | 25.0% |
| ! | TGTAAAGTTCTTCATCAAAT+TGG | - | chr1.3:58413328-58413347 | None:intergenic | 25.0% |
| ! | TTAGAAATTTCAGGAAGAAT+GGG | - | chr1.3:58415551-58415570 | None:intergenic | 25.0% |
| ! | TTAGAAATTTCCAGAAGAAT+GGG | - | chr1.3:58415165-58415184 | None:intergenic | 25.0% |
| ! | TTCAATAGTTTCTACATTTC+TGG | + | chr1.3:58413101-58413120 | MS.gene44095:intron | 25.0% |
| ! | TTCACACTTACTAAGAAATT+TGG | + | chr1.3:58413740-58413759 | MS.gene44095:intron | 25.0% |
| ! | TTTAGAAATTTCAGGAAGAA+TGG | - | chr1.3:58415552-58415571 | None:intergenic | 25.0% |
| ! | TTTAGAAATTTCCAGAAGAA+TGG | - | chr1.3:58415166-58415185 | None:intergenic | 25.0% |
| ! | TTTCAAATTCAATGTATGGT+GGG | + | chr1.3:58412736-58412755 | MS.gene44095:intron | 25.0% |
| !! | AAAGTTTTTCCAAACATGAA+TGG | - | chr1.3:58415991-58416010 | None:intergenic | 25.0% |
| !! | AACTAAATTCAAGTTACCTT+AGG | - | chr1.3:58414213-58414232 | None:intergenic | 25.0% |
| !! | AAGAAGTTATTCTAAAGAGA+GGG | + | chr1.3:58415080-58415099 | MS.gene44095:intron | 25.0% |
| !! | ACTAAATTCAAGTTACCTTA+GGG | - | chr1.3:58414212-58414231 | None:intergenic | 25.0% |
| !! | AGGATTTTCTTTTCTTCTTT+AGG | + | chr1.3:58414090-58414109 | MS.gene44095:intron | 25.0% |
| !! | CAATAATGTTATTTGCAGTT+TGG | - | chr1.3:58413517-58413536 | None:intergenic | 25.0% |
| !! | CATGGGATAATATATGTTTT+AGG | + | chr1.3:58412412-58412431 | MS.gene44095:intron | 25.0% |
| !! | CCTTTGGAAAAATTGAAAAA+TGG | - | chr1.3:58413611-58413630 | None:intergenic | 25.0% |
| !! | GGCAAATAAAGTTATTGATT+TGG | - | chr1.3:58414760-58414779 | None:intergenic | 25.0% |
| !! | TAAGAAGTTATTCTAAAGAG+AGG | + | chr1.3:58415079-58415098 | MS.gene44095:intron | 25.0% |
| !! | TCTTGTTATAAAGTTAAGTG+AGG | - | chr1.3:58413642-58413661 | None:intergenic | 25.0% |
| !! | TTTCCAATTTAGAATTCAAG+AGG | - | chr1.3:58412278-58412297 | None:intergenic | 25.0% |
| !! | TTTTCAAATTCAATGTATGG+TGG | + | chr1.3:58412735-58412754 | MS.gene44095:intron | 25.0% |
| !!! | AACAACGTTTTTGTTTTTTG+AGG | - | chr1.3:58412771-58412790 | None:intergenic | 25.0% |
| !!! | ACAACTAAAAGAAAAGTGTT+GGG | - | chr1.3:58412802-58412821 | None:intergenic | 25.0% |
| !!! | CCATTTTTCAATTTTTCCAA+AGG | + | chr1.3:58413608-58413627 | MS.gene44095:intron | 25.0% |
| !!! | TGATTTTGTTGACTTCTTTA+CGG | - | chr1.3:58412060-58412079 | None:intergenic | 25.0% |
| !!! | TGTTTCTTTTTTCTGTTGAT+TGG | + | chr1.3:58413540-58413559 | MS.gene44095:intron | 25.0% |
| AAATCAGAGGAAAAAGATTG+GGG | - | chr1.3:58414059-58414078 | None:intergenic | 30.0% | |
| AAGCCATCAATATTGAACTT+AGG | - | chr1.3:58415027-58415046 | None:intergenic | 30.0% | |
| ACATGAAACAATTAAGGAAG+CGG | - | chr1.3:58412825-58412844 | None:intergenic | 30.0% | |
| ACGATGGAAACAATTTGATA+GGG | - | chr1.3:58414847-58414866 | None:intergenic | 30.0% | |
| ACTGTGATTACAAAAACAAG+AGG | - | chr1.3:58412654-58412673 | None:intergenic | 30.0% | |
| AGAAGTCAACAAAATCAACA+AGG | + | chr1.3:58412063-58412082 | MS.gene44095:CDS | 30.0% | |
| AGATGCATTAAACATTCCTT+TGG | - | chr1.3:58414642-58414661 | None:intergenic | 30.0% | |
| AGTATTATTCGCTAACTGTT+GGG | + | chr1.3:58415447-58415466 | MS.gene44095:intron | 30.0% | |
| CAAATCAGAGGAAAAAGATT+GGG | - | chr1.3:58414060-58414079 | None:intergenic | 30.0% | |
| CCATGAATCATTATCATTTG+GGG | - | chr1.3:58414409-58414428 | None:intergenic | 30.0% | |
| CCCATGAATCATTATCATTT+GGG | - | chr1.3:58414410-58414429 | None:intergenic | 30.0% | |
| CTTAGAATAACTGTCATTGA+TGG | + | chr1.3:58415648-58415667 | MS.gene44095:intron | 30.0% | |
| GAAAAAGATTGCTGAAAAAG+AGG | + | chr1.3:58412230-58412249 | MS.gene44095:CDS | 30.0% | |
| GTCATTGAAAAAGGAAACTT+AGG | + | chr1.3:58413862-58413881 | MS.gene44095:intron | 30.0% | |
| TAACATAAAAAGCTTCAGCT+GGG | - | chr1.3:58413035-58413054 | None:intergenic | 30.0% | |
| TACGATGGAAACAATTTGAT+AGG | - | chr1.3:58414848-58414867 | None:intergenic | 30.0% | |
| TAGTATTATTCGCTAACTGT+TGG | + | chr1.3:58415446-58415465 | MS.gene44095:intron | 30.0% | |
| TCAAATCAGAGGAAAAAGAT+TGG | - | chr1.3:58414061-58414080 | None:intergenic | 30.0% | |
| TCCCATGAATCATTATCATT+TGG | - | chr1.3:58414411-58414430 | None:intergenic | 30.0% | |
| TTAGATGCTTCTGCTTAAAA+TGG | - | chr1.3:58413719-58413738 | None:intergenic | 30.0% | |
| TTATCAATCTCGACAAAGAA+TGG | + | chr1.3:58411924-58411943 | MS.gene44095:CDS | 30.0% | |
| TTCAAATTCAATGTATGGTG+GGG | + | chr1.3:58412737-58412756 | MS.gene44095:intron | 30.0% | |
| TTCAATGACTCTTATTCTCA+TGG | - | chr1.3:58413851-58413870 | None:intergenic | 30.0% | |
| TTTCATCGAAATTGCTTCTT+AGG | - | chr1.3:58413821-58413840 | None:intergenic | 30.0% | |
| ! | ACTTGAGCAATATGTTCTTT+TGG | + | chr1.3:58415753-58415772 | MS.gene44095:intron | 30.0% |
| ! | AGAAGTTATTCTAAAGAGAG+GGG | + | chr1.3:58415081-58415100 | MS.gene44095:intron | 30.0% |
| ! | CCCAAATGATAATGATTCAT+GGG | + | chr1.3:58414407-58414426 | MS.gene44095:CDS | 30.0% |
| ! | CTAAATTCAAGTTACCTTAG+GGG | - | chr1.3:58414211-58414230 | None:intergenic | 30.0% |
| ! | CTTTATAACAAGAAGCATAC+TGG | + | chr1.3:58413649-58413668 | MS.gene44095:intron | 30.0% |
| ! | CTTTTTATGTTAGTCACCTA+TGG | + | chr1.3:58413043-58413062 | MS.gene44095:intron | 30.0% |
| ! | GACAACTAAAAGAAAAGTGT+TGG | - | chr1.3:58412803-58412822 | None:intergenic | 30.0% |
| ! | TCAAAAGTTATTCTAGAGAG+AGG | + | chr1.3:58415470-58415489 | MS.gene44095:intron | 30.0% |
| ! | TCTTTTCTTCTTTAGGTAAC+CGG | + | chr1.3:58414097-58414116 | MS.gene44095:intron | 30.0% |
| ! | TTTGGAATAATTGTCAGTGA+TGG | + | chr1.3:58415265-58415284 | MS.gene44095:intron | 30.0% |
| !! | AAAGAAAAGTGTTGGGTAAA+AGG | - | chr1.3:58412795-58412814 | None:intergenic | 30.0% |
| !! | AAGAAAAGTGTTGGGTAAAA+GGG | - | chr1.3:58412794-58412813 | None:intergenic | 30.0% |
| !! | CGAGTTTATTTCTAAATCTG+AGG | + | chr1.3:58412200-58412219 | MS.gene44095:CDS | 30.0% |
| !! | GAATATTTAGTTTGTGATGG+TGG | + | chr1.3:58415363-58415382 | MS.gene44095:intron | 30.0% |
| !!! | ATTTTGTTTCTGTGTGTGTT+AGG | + | chr1.3:58412161-58412180 | MS.gene44095:intron | 30.0% |
| !!! | CATGTTTGGGCTTAATTTTT+TGG | + | chr1.3:58413226-58413245 | MS.gene44095:CDS | 30.0% |
| !!! | TTTTGTTTCTGTGTGTGTTA+GGG | + | chr1.3:58412162-58412181 | MS.gene44095:intron | 30.0% |
| AAGGACACCTAGATCAATAA+TGG | - | chr1.3:58413373-58413392 | None:intergenic | 35.0% | |
| AAGTGAGGAAATCATTCCTT+TGG | - | chr1.3:58413627-58413646 | None:intergenic | 35.0% | |
| AATCAGAGGAAAAAGATTGG+GGG | - | chr1.3:58414058-58414077 | None:intergenic | 35.0% | |
| AATCTCTTCCGTGTAGAAAA+GGG | + | chr1.3:58411833-58411852 | MS.gene44095:CDS | 35.0% | |
| ACGTCTTTCTTGATGAAGAA+TGG | - | chr1.3:58413281-58413300 | None:intergenic | 35.0% | |
| AGAATAACTGTCATTGATGG+TGG | + | chr1.3:58415651-58415670 | MS.gene44095:intron | 35.0% | |
| ATTCTGCAGTTAAACTCTGA+TGG | + | chr1.3:58415414-58415433 | MS.gene44095:intron | 35.0% | |
| CAAATTGTTTCCATCGTATC+TGG | + | chr1.3:58414850-58414869 | MS.gene44095:CDS | 35.0% | |
| CATGTCAAAGACATAACAGT+GGG | - | chr1.3:58414605-58414624 | None:intergenic | 35.0% | |
| CCCTGTATATGTTAGAATCT+CGG | + | chr1.3:58415508-58415527 | MS.gene44095:intron | 35.0% | |
| CCGAGATTCTAACATATACA+GGG | - | chr1.3:58415511-58415530 | None:intergenic | 35.0% | |
| CTAACATAAAAAGCTTCAGC+TGG | - | chr1.3:58413036-58413055 | None:intergenic | 35.0% | |
| CTTAGATAAGCTCAAATCAG+AGG | - | chr1.3:58414072-58414091 | None:intergenic | 35.0% | |
| GAATTTCTAATTTACGGGCT+TGG | - | chr1.3:58414978-58414997 | None:intergenic | 35.0% | |
| GAGTAACCAATACAGAAGAT+AGG | - | chr1.3:58414702-58414721 | None:intergenic | 35.0% | |
| GTAGTCTGTACAATTTGAAC+AGG | - | chr1.3:58414956-58414975 | None:intergenic | 35.0% | |
| GTTCACTCCATTATTGATCT+AGG | + | chr1.3:58413363-58413382 | MS.gene44095:intron | 35.0% | |
| TAATGGAGGGAAGATTATGA+AGG | - | chr1.3:58414492-58414511 | None:intergenic | 35.0% | |
| TCCGAGATTCTAACATATAC+AGG | - | chr1.3:58415512-58415531 | None:intergenic | 35.0% | |
| TGTAAACAGAAGATGAAGAG+AGG | - | chr1.3:58411973-58411992 | None:intergenic | 35.0% | |
| TGTTTCAACTGCAGTAGATA+AGG | + | chr1.3:58413076-58413095 | MS.gene44095:intron | 35.0% | |
| TTAATGCTTACATTCGAGAC+TGG | + | chr1.3:58413971-58413990 | MS.gene44095:intron | 35.0% | |
| TTAGTGCCTATCTTCTGTAT+TGG | + | chr1.3:58414693-58414712 | MS.gene44095:intron | 35.0% | |
| TTCCTTTGGTTAGACATGTT+TGG | - | chr1.3:58414628-58414647 | None:intergenic | 35.0% | |
| ! | AAAGTTATTCTAGAGAGAGG+AGG | + | chr1.3:58415473-58415492 | MS.gene44095:intron | 35.0% |
| ! | AACCAAGCTCTAATCATGTT+TGG | + | chr1.3:58413212-58413231 | MS.gene44095:CDS | 35.0% |
| ! | AAGTTATTCTAGAGAGAGGA+GGG | + | chr1.3:58415474-58415493 | MS.gene44095:intron | 35.0% |
| ! | ACCAAGCTCTAATCATGTTT+GGG | + | chr1.3:58413213-58413232 | MS.gene44095:CDS | 35.0% |
| ! | AGAAGTATGATCTAGAAGCA+TGG | + | chr1.3:58414896-58414915 | MS.gene44095:CDS | 35.0% |
| ! | CCCCAAATGATAATGATTCA+TGG | + | chr1.3:58414406-58414425 | MS.gene44095:CDS | 35.0% |
| ! | CTCTGATTTGAGCTTATCTA+AGG | + | chr1.3:58414070-58414089 | MS.gene44095:intron | 35.0% |
| ! | CTTTTCTTCTTTAGGTAACC+GGG | + | chr1.3:58414098-58414117 | MS.gene44095:intron | 35.0% |
| ! | GAAGTTATTCTAAAGAGAGG+GGG | + | chr1.3:58415082-58415101 | MS.gene44095:intron | 35.0% |
| ! | GAATAACTGTCATTGATGGT+GGG | + | chr1.3:58415652-58415671 | MS.gene44095:intron | 35.0% |
| ! | GAGATTTGGAATGTGATTCT+GGG | + | chr1.3:58412613-58412632 | MS.gene44095:intron | 35.0% |
| ! | TGAGATTTGGAATGTGATTC+TGG | + | chr1.3:58412612-58412631 | MS.gene44095:intron | 35.0% |
| ! | TTCTTTCTTTTTCTGCTGAC+TGG | + | chr1.3:58415186-58415205 | MS.gene44095:intron | 35.0% |
| ! | TTTTCTTCTTTAGGTAACCG+GGG | + | chr1.3:58414099-58414118 | MS.gene44095:intron | 35.0% |
| !! | ACAGTAGCTATTTGTTTTCG+TGG | + | chr1.3:58412669-58412688 | MS.gene44095:intron | 35.0% |
| !! | AGGAAACTTAGGGCTATTTT+AGG | + | chr1.3:58413873-58413892 | MS.gene44095:intron | 35.0% |
| !! | GAGATAGCTGATTTGAAGAA+AGG | + | chr1.3:58412518-58412537 | MS.gene44095:CDS | 35.0% |
| !! | TCCAGCTTCTAAAACATACA+GGG | + | chr1.3:58414921-58414940 | MS.gene44095:CDS | 35.0% |
| !! | TTCCAGCTTCTAAAACATAC+AGG | + | chr1.3:58414920-58414939 | MS.gene44095:CDS | 35.0% |
| !! | TTCTAAAACATACAGGGAGT+TGG | + | chr1.3:58414927-58414946 | MS.gene44095:CDS | 35.0% |
| !!! | CTTAATTTTTTGGCGGAAAG+GGG | + | chr1.3:58413236-58413255 | MS.gene44095:CDS | 35.0% |
| !!! | GCTTAATTTTTTGGCGGAAA+GGG | + | chr1.3:58413235-58413254 | MS.gene44095:CDS | 35.0% |
| !!! | GTTTGGGCTTAATTTTTTGG+CGG | + | chr1.3:58413229-58413248 | MS.gene44095:CDS | 35.0% |
| AAACAGAAGATGAAGAGAGG+AGG | - | chr1.3:58411970-58411989 | None:intergenic | 40.0% | |
| AACCGAACAATGAAGCCAAA+GGG | + | chr1.3:58416028-58416047 | MS.gene44095:CDS | 40.0% | |
| AAGACATGTTAGTGATGCCT+CGG | + | chr1.3:58413409-58413428 | MS.gene44095:intron | 40.0% | |
| AATTCGATACGGACAGAAGA+AGG | + | chr1.3:58414993-58415012 | MS.gene44095:CDS | 40.0% | |
| ACAAACCTCATCATTGCTGA+TGG | - | chr1.3:58412331-58412350 | None:intergenic | 40.0% | |
| ACAACACCTCCATCTCTTAA+TGG | - | chr1.3:58414509-58414528 | None:intergenic | 40.0% | |
| ATACTTATCATCTCCTTCCC+CGG | - | chr1.3:58414119-58414138 | None:intergenic | 40.0% | |
| ATCAGAGGAAAAAGATTGGG+GGG | - | chr1.3:58414057-58414076 | None:intergenic | 40.0% | |
| ATCATGAACGAGGTTTCCAA+TGG | - | chr1.3:58412301-58412320 | None:intergenic | 40.0% | |
| ATCTTCCCTCCATTAAGAGA+TGG | + | chr1.3:58414497-58414516 | MS.gene44095:intron | 40.0% | |
| CAAACCTCATCATTGCTGAT+GGG | - | chr1.3:58412330-58412349 | None:intergenic | 40.0% | |
| CAAAGAAGCTATCTTTGTCG+TGG | - | chr1.3:58413575-58413594 | None:intergenic | 40.0% | |
| CAATCTCTTCCGTGTAGAAA+AGG | + | chr1.3:58411832-58411851 | MS.gene44095:CDS | 40.0% | |
| CATACTAGAGAACAACCAGA+AGG | + | chr1.3:58415933-58415952 | MS.gene44095:CDS | 40.0% | |
| GAAACACAACAGTGTTCCAT+AGG | - | chr1.3:58413062-58413081 | None:intergenic | 40.0% | |
| GAGATTCACGGATGATTTCA+GGG | - | chr1.3:58411865-58411884 | None:intergenic | 40.0% | |
| GATTGCTGAAAAAGAGGTTG+AGG | + | chr1.3:58412236-58412255 | MS.gene44095:CDS | 40.0% | |
| GCATGTCAAAGACATAACAG+TGG | - | chr1.3:58414606-58414625 | None:intergenic | 40.0% | |
| GGAAATGCTCAAAAACTCTG+AGG | + | chr1.3:58414440-58414459 | MS.gene44095:CDS | 40.0% | |
| GGAATAATTGTCAGTGATGG+CGG | + | chr1.3:58415268-58415287 | MS.gene44095:intron | 40.0% | |
| GGTAGAGGTTTCTATCTCAA+AGG | + | chr1.3:58413173-58413192 | MS.gene44095:CDS | 40.0% | |
| GGTTTCTATCTCAAAGGAGA+TGG | + | chr1.3:58413179-58413198 | MS.gene44095:CDS | 40.0% | |
| GTGCATATCATTCAGACGAA+TGG | + | chr1.3:58414167-58414186 | MS.gene44095:CDS | 40.0% | |
| GTTCTCTAGTATGCAGCAAA+TGG | - | chr1.3:58415926-58415945 | None:intergenic | 40.0% | |
| TACTTGACAGTGTCCAGATT+CGG | - | chr1.3:58412908-58412927 | None:intergenic | 40.0% | |
| TAGAGATACCAGAAGTCCTT+AGG | + | chr1.3:58415965-58415984 | MS.gene44095:CDS | 40.0% | |
| TAGATCATACTTCTTAGCCG+CGG | - | chr1.3:58414890-58414909 | None:intergenic | 40.0% | |
| TATGCTTACTCGCTTGAGTT+TGG | - | chr1.3:58412095-58412114 | None:intergenic | 40.0% | |
| TCCACATGATTCTTGAGCTT+CGG | - | chr1.3:58412482-58412501 | None:intergenic | 40.0% | |
| TCTGAATGATATGCACACAG+AGG | - | chr1.3:58414163-58414182 | None:intergenic | 40.0% | |
| TCTTGCTTTCGTAAAGAAGC+TGG | + | chr1.3:58414309-58414328 | MS.gene44095:CDS | 40.0% | |
| TGAGATTCACGGATGATTTC+AGG | - | chr1.3:58411866-58411885 | None:intergenic | 40.0% | |
| TGCCAAACATGTCTAACCAA+AGG | + | chr1.3:58414623-58414642 | MS.gene44095:intron | 40.0% | |
| TTCCAAACATGAATGGCCTA+AGG | - | chr1.3:58415984-58416003 | None:intergenic | 40.0% | |
| TTTGTTGAACTCCACTCTCA+CGG | + | chr1.3:58415888-58415907 | MS.gene44095:CDS | 40.0% | |
| ! | AATCTTGTTGTCCGAACATG+GGG | + | chr1.3:58412440-58412459 | MS.gene44095:CDS | 40.0% |
| ! | ACAATCTTGTTGTCCGAACA+TGG | + | chr1.3:58412438-58412457 | MS.gene44095:CDS | 40.0% |
| ! | AGTTATTCTAGAGAGAGGAG+GGG | + | chr1.3:58415475-58415494 | MS.gene44095:intron | 40.0% |
| ! | CAATCTTGTTGTCCGAACAT+GGG | + | chr1.3:58412439-58412458 | MS.gene44095:CDS | 40.0% |
| ! | TAACAAGAAGCATACTGGCA+TGG | + | chr1.3:58413654-58413673 | MS.gene44095:intron | 40.0% |
| ! | TCAATGTATGGTGGGGTTAA+GGG | + | chr1.3:58412744-58412763 | MS.gene44095:intron | 40.0% |
| ! | TTCAATGTATGGTGGGGTTA+AGG | + | chr1.3:58412743-58412762 | MS.gene44095:intron | 40.0% |
| ! | TTCCCTTTGGCTTCATTGTT+CGG | - | chr1.3:58416033-58416052 | None:intergenic | 40.0% |
| ! | TTGTTCGGTTGGTTCTTGAA+TGG | - | chr1.3:58416018-58416037 | None:intergenic | 40.0% |
| !!! | CGTGGTAGCTAGTCTTTTTT+TGG | + | chr1.3:58412687-58412706 | MS.gene44095:intron | 40.0% |
| !!! | GGCTTAATTTTTTGGCGGAA+AGG | + | chr1.3:58413234-58413253 | MS.gene44095:CDS | 40.0% |
| !!! | TCCCTGTATGTTTTAGAAGC+TGG | - | chr1.3:58414925-58414944 | None:intergenic | 40.0% |
| AAAAGACCAGTCAGCAGAGA+AGG | - | chr1.3:58415580-58415599 | None:intergenic | 45.0% | |
| AAGAAGCTGGATCTCATGGT+CGG | + | chr1.3:58414322-58414341 | MS.gene44095:CDS | 45.0% | |
| AAGTTACCTTAGGGGTAGAC+GGG | - | chr1.3:58414203-58414222 | None:intergenic | 45.0% | |
| ACACCTCCATCTCTTAATGG+AGG | - | chr1.3:58414506-58414525 | None:intergenic | 45.0% | |
| ACCGAAGCTCAAGAATCATG+TGG | + | chr1.3:58412478-58412497 | MS.gene44095:CDS | 45.0% | |
| ACTAGAGAACAACCAGAAGG+AGG | + | chr1.3:58415936-58415955 | MS.gene44095:CDS | 45.0% | |
| ACTTGACAGTGTCCAGATTC+GGG | - | chr1.3:58412907-58412926 | None:intergenic | 45.0% | |
| AGCCAAAGGGAAGAAATCGA+AGG | + | chr1.3:58416041-58416060 | MS.gene44095:CDS | 45.0% | |
| ATGAATGGCCTAAGGACTTC+TGG | - | chr1.3:58415976-58415995 | None:intergenic | 45.0% | |
| ATGCTTACATTCGAGACTGG+AGG | + | chr1.3:58413974-58413993 | MS.gene44095:intron | 45.0% | |
| ATTCTTCCTTCTCTGCTGAC+TGG | + | chr1.3:58415571-58415590 | MS.gene44095:intron | 45.0% | |
| CAACCGAACAATGAAGCCAA+AGG | + | chr1.3:58416027-58416046 | MS.gene44095:CDS | 45.0% | |
| CAAGTTACCTTAGGGGTAGA+CGG | - | chr1.3:58414204-58414223 | None:intergenic | 45.0% | |
| CACCTCCATCTCTTAATGGA+GGG | - | chr1.3:58414505-58414524 | None:intergenic | 45.0% | |
| CGTAAAGAAGCTGGATCTCA+TGG | + | chr1.3:58414318-58414337 | MS.gene44095:CDS | 45.0% | |
| GCCCAAACATGATTAGAGCT+TGG | - | chr1.3:58413217-58413236 | None:intergenic | 45.0% | |
| GCTCTGCAACAGGATAAAAG+AGG | - | chr1.3:58415842-58415861 | None:intergenic | 45.0% | |
| GTCCTTAGGCCATTCATGTT+TGG | + | chr1.3:58415979-58415998 | MS.gene44095:CDS | 45.0% | |
| GTTCAAAGCTCCAGATACGA+TGG | - | chr1.3:58414863-58414882 | None:intergenic | 45.0% | |
| TCTCATGGTCGGGATACTTT+AGG | + | chr1.3:58414333-58414352 | MS.gene44095:CDS | 45.0% | |
| TGAAAAAGAGGTTGAGGCTC+AGG | + | chr1.3:58412242-58412261 | MS.gene44095:CDS | 45.0% | |
| TGATTCATGGGACATGCATG+AGG | + | chr1.3:58414419-58414438 | MS.gene44095:CDS | 45.0% | |
| TGCTTACATTCGAGACTGGA+GGG | + | chr1.3:58413975-58413994 | MS.gene44095:intron | 45.0% | |
| TGGGAACAGAATCATGAACG+AGG | - | chr1.3:58412311-58412330 | None:intergenic | 45.0% | |
| TGTTCCCATCAGCAATGATG+AGG | + | chr1.3:58412323-58412342 | MS.gene44095:CDS | 45.0% | |
| TTCCCTCCATTAAGAGATGG+AGG | + | chr1.3:58414500-58414519 | MS.gene44095:intron | 45.0% | |
| TTGGAATGTGATTCTGGGTC+AGG | + | chr1.3:58412618-58412637 | MS.gene44095:intron | 45.0% | |
| ! | CTCTGAGGACTTCTACAAAG+CGG | + | chr1.3:58414455-58414474 | MS.gene44095:CDS | 45.0% |
| ! | CTCTTTTCTCACCCCATGTT+CGG | - | chr1.3:58412454-58412473 | None:intergenic | 45.0% |
| ! | CTTTGGCTTCATTGTTCGGT+TGG | - | chr1.3:58416029-58416048 | None:intergenic | 45.0% |
| ! | GGTTGTGACCCTTTTCTACA+CGG | - | chr1.3:58411844-58411863 | None:intergenic | 45.0% |
| ! | TGTTTCTGTGTGTGTTAGGG+TGG | + | chr1.3:58412165-58412184 | MS.gene44095:intron | 45.0% |
| !! | AAAATAAAAAATAAAAAAGA+GGG | - | chr1.3:58414781-58414800 | None:intergenic | 5.0% |
| !!! | TATATTATATAATATAGTTT+TGG | + | chr1.3:58414536-58414555 | MS.gene44095:intron | 5.0% |
| ACCTCTACCTCCAGCAACAT+CGG | - | chr1.3:58413162-58413181 | None:intergenic | 50.0% | |
| ACTGCTCATTGCTCTGCAAC+AGG | - | chr1.3:58415852-58415871 | None:intergenic | 50.0% | |
| AGAAGCTGGATCTCATGGTC+GGG | + | chr1.3:58414323-58414342 | MS.gene44095:CDS | 50.0% | |
| AGCATACTGGCATGGTGCAA+TGG | + | chr1.3:58413662-58413681 | MS.gene44095:intron | 50.0% | |
| AGTGTCCAGATTCGGGATAG+TGG | - | chr1.3:58412900-58412919 | None:intergenic | 50.0% | |
| AGTTCACCAGTTCGAGAAGG+TGG | + | chr1.3:58414365-58414384 | MS.gene44095:CDS | 50.0% | |
| ATACTGGCATGGTGCAATGG+TGG | + | chr1.3:58413665-58413684 | MS.gene44095:intron | 50.0% | |
| ATGATAGGAGCCGATGTTGC+TGG | + | chr1.3:58413149-58413168 | MS.gene44095:intron | 50.0% | |
| CCTTCTCGAACTGGTGAACT+CGG | - | chr1.3:58414365-58414384 | None:intergenic | 50.0% | |
| CTTCTTTAGGTAACCGGGGA+AGG | + | chr1.3:58414103-58414122 | MS.gene44095:intron | 50.0% | |
| GAGAACAACCAGAAGGAGGA+TGG | + | chr1.3:58415940-58415959 | MS.gene44095:CDS | 50.0% | |
| GGCCTTCGATTTCTTCCCTT+TGG | - | chr1.3:58416046-58416065 | None:intergenic | 50.0% | |
| TCTCTACTCCATCCTCCTTC+TGG | - | chr1.3:58415951-58415970 | None:intergenic | 50.0% | |
| TGTGATTCTGGGTCAGGATG+TGG | + | chr1.3:58412624-58412643 | MS.gene44095:intron | 50.0% | |
| TTCGTCAACTACTTCGACGC+TGG | - | chr1.3:58411903-58411922 | None:intergenic | 50.0% | |
| TTCTGCCACTATCCCGAATC+TGG | + | chr1.3:58412892-58412911 | MS.gene44095:intron | 50.0% | |
| ! | AACGACGGCGTTGAGATTCA+CGG | - | chr1.3:58411877-58411896 | None:intergenic | 50.0% |
| ! | TCGGTTGGTTCTTGAATGGC+AGG | - | chr1.3:58416014-58416033 | None:intergenic | 50.0% |
| !! | CATGCTTGCTGTAGGTATGC+TGG | + | chr1.3:58414279-58414298 | MS.gene44095:intron | 50.0% |
| !! | CTTGGGAACATGCTTGCTGT+AGG | + | chr1.3:58414271-58414290 | MS.gene44095:intron | 50.0% |
| !! | TTGGGCTAGTTGAGCACACT+TGG | - | chr1.3:58413309-58413328 | None:intergenic | 50.0% |
| ACTGCTCCACCTTCTCGAAC+TGG | - | chr1.3:58414374-58414393 | None:intergenic | 55.0% | |
| ATAGGAGCCGATGTTGCTGG+AGG | + | chr1.3:58413152-58413171 | MS.gene44095:intron | 55.0% | |
| ATCCTACCCGTCTACCCCTA+AGG | + | chr1.3:58414194-58414213 | MS.gene44095:CDS | 55.0% | |
| CCACTCTCACGGCTACTGAA+AGG | + | chr1.3:58415899-58415918 | MS.gene44095:CDS | 55.0% | |
| CCGAGTTCACCAGTTCGAGA+AGG | + | chr1.3:58414362-58414381 | MS.gene44095:CDS | 55.0% | |
| CCTTTCAGTAGCCGTGAGAG+TGG | - | chr1.3:58415902-58415921 | None:intergenic | 55.0% | |
| CTTCGACGCTGGCAAAACGA+CGG | - | chr1.3:58411892-58411911 | None:intergenic | 55.0% | |
| TACCTTAGGGGTAGACGGGT+AGG | - | chr1.3:58414199-58414218 | None:intergenic | 55.0% | |
| TTAGGGGTAGACGGGTAGGA+TGG | - | chr1.3:58414195-58414214 | None:intergenic | 55.0% | |
| !! | TGGAGCTTTGAACGATGCCG+CGG | + | chr1.3:58414870-58414889 | MS.gene44095:CDS | 55.0% |
| GCCGATGTTGCTGGAGGTAG+AGG | + | chr1.3:58413158-58413177 | MS.gene44095:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 58411821 | 58416068 | 58411821 | ID=MS.gene44095 |
| chr1.3 | mRNA | 58411821 | 58416068 | 58411821 | ID=MS.gene44095.t1;Parent=MS.gene44095 |
| chr1.3 | exon | 58411821 | 58411953 | 58411821 | ID=MS.gene44095.t1.exon1;Parent=MS.gene44095.t1 |
| chr1.3 | CDS | 58411821 | 58411953 | 58411821 | ID=cds.MS.gene44095.t1;Parent=MS.gene44095.t1 |
| chr1.3 | exon | 58412035 | 58412105 | 58412035 | ID=MS.gene44095.t1.exon2;Parent=MS.gene44095.t1 |
| chr1.3 | CDS | 58412035 | 58412105 | 58412035 | ID=cds.MS.gene44095.t1;Parent=MS.gene44095.t1 |
| chr1.3 | exon | 58412183 | 58412344 | 58412183 | ID=MS.gene44095.t1.exon3;Parent=MS.gene44095.t1 |
| chr1.3 | CDS | 58412183 | 58412344 | 58412183 | ID=cds.MS.gene44095.t1;Parent=MS.gene44095.t1 |
| chr1.3 | exon | 58412434 | 58412539 | 58412434 | ID=MS.gene44095.t1.exon4;Parent=MS.gene44095.t1 |
| chr1.3 | CDS | 58412434 | 58412539 | 58412434 | ID=cds.MS.gene44095.t1;Parent=MS.gene44095.t1 |
| chr1.3 | exon | 58413156 | 58413349 | 58413156 | ID=MS.gene44095.t1.exon5;Parent=MS.gene44095.t1 |
| chr1.3 | CDS | 58413156 | 58413349 | 58413156 | ID=cds.MS.gene44095.t1;Parent=MS.gene44095.t1 |
| chr1.3 | exon | 58414112 | 58414215 | 58414112 | ID=MS.gene44095.t1.exon6;Parent=MS.gene44095.t1 |
| chr1.3 | CDS | 58414112 | 58414215 | 58414112 | ID=cds.MS.gene44095.t1;Parent=MS.gene44095.t1 |
| chr1.3 | exon | 58414293 | 58414476 | 58414293 | ID=MS.gene44095.t1.exon7;Parent=MS.gene44095.t1 |
| chr1.3 | CDS | 58414293 | 58414476 | 58414293 | ID=cds.MS.gene44095.t1;Parent=MS.gene44095.t1 |
| chr1.3 | exon | 58414835 | 58415014 | 58414835 | ID=MS.gene44095.t1.exon8;Parent=MS.gene44095.t1 |
| chr1.3 | CDS | 58414835 | 58415014 | 58414835 | ID=cds.MS.gene44095.t1;Parent=MS.gene44095.t1 |
| chr1.3 | exon | 58415859 | 58416068 | 58415859 | ID=MS.gene44095.t1.exon9;Parent=MS.gene44095.t1 |
| chr1.3 | CDS | 58415859 | 58416068 | 58415859 | ID=cds.MS.gene44095.t1;Parent=MS.gene44095.t1 |
| Gene Sequence |
| Protein sequence |
