Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056036.t1 | RHN80765.1 | 98.4 | 447 | 7 | 0 | 1 | 447 | 1 | 447 | 2.50E-249 | 870.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056036.t1 | Q39230 | 74.5 | 451 | 111 | 2 | 1 | 447 | 1 | 451 | 8.9e-195 | 681.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056036.t1 | A0A396JX57 | 98.4 | 447 | 7 | 0 | 1 | 447 | 1 | 447 | 1.8e-249 | 870.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene056036 | MS.gene21091 | 0.814888 | 1.23E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene82886 | MS.gene056036 | PPI |
| MS.gene027585 | MS.gene056036 | PPI |
| MS.gene056036 | MS.gene35246 | PPI |
| MS.gene43889 | MS.gene056036 | PPI |
| MS.gene38588 | MS.gene056036 | PPI |
| MS.gene055486 | MS.gene056036 | PPI |
| MS.gene013131 | MS.gene056036 | PPI |
| MS.gene026998 | MS.gene056036 | PPI |
| MS.gene45075 | MS.gene056036 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056036.t1 | MTR_1g082850 | 99.105 | 447 | 4 | 0 | 1 | 447 | 1 | 447 | 0.0 | 921 |
| MS.gene056036.t1 | MTR_3g099470 | 36.041 | 394 | 233 | 8 | 46 | 426 | 151 | 538 | 1.40e-74 | 243 |
| MS.gene056036.t1 | MTR_7g029025 | 75.000 | 156 | 17 | 2 | 288 | 442 | 123 | 257 | 8.39e-71 | 226 |
| MS.gene056036.t1 | MTR_7g029025 | 84.615 | 130 | 20 | 0 | 1 | 130 | 1 | 130 | 9.97e-61 | 200 |
| MS.gene056036.t1 | MTR_3g099470 | 31.090 | 312 | 207 | 5 | 46 | 355 | 151 | 456 | 1.38e-46 | 167 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056036.t1 | AT5G27470 | 76.275 | 451 | 103 | 3 | 1 | 447 | 1 | 451 | 0.0 | 724 |
| MS.gene056036.t1 | AT1G11870 | 33.738 | 412 | 249 | 8 | 27 | 426 | 106 | 505 | 6.86e-73 | 238 |
| MS.gene056036.t1 | AT1G11870 | 33.738 | 412 | 249 | 8 | 27 | 426 | 104 | 503 | 7.04e-73 | 238 |
| MS.gene056036.t1 | AT1G11870 | 36.313 | 358 | 208 | 7 | 85 | 426 | 18 | 371 | 1.66e-71 | 231 |
| MS.gene056036.t1 | AT1G11870 | 28.329 | 353 | 240 | 5 | 27 | 378 | 106 | 446 | 4.44e-46 | 166 |
| MS.gene056036.t1 | AT1G11870 | 29.204 | 339 | 227 | 5 | 19 | 356 | 98 | 424 | 7.09e-46 | 165 |
| MS.gene056036.t1 | AT1G11870 | 29.530 | 298 | 197 | 5 | 27 | 323 | 106 | 391 | 9.50e-39 | 145 |
Find 104 sgRNAs with CRISPR-Local
Find 279 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTAAAGTTCTTCATCAAAT+TGG | 0.134658 | 1.1:-61345003 | None:intergenic |
| AAACCTCTTGAATTCTAAAT+TGG | 0.181417 | 1.1:+61343928 | MS.gene056036:CDS |
| TGAGATTCACGGATGATTTC+AGG | 0.189941 | 1.1:-61343519 | None:intergenic |
| CAAATTGTTTCCATCGTATC+TGG | 0.244081 | 1.1:+61346556 | MS.gene056036:CDS |
| ACCCCAAATGATAATGATTC+AGG | 0.277570 | 1.1:+61346088 | MS.gene056036:CDS |
| CCCCTGAATCATTATCATTT+GGG | 0.283890 | 1.1:-61346090 | None:intergenic |
| CGTATCGAATTTCTAATTTA+CGG | 0.289372 | 1.1:-61346687 | None:intergenic |
| TTCCCTTTGGCTTCATTGTT+CGG | 0.292118 | 1.1:-61347735 | None:intergenic |
| AACCAAGCTCTAATCATGTT+TGG | 0.299701 | 1.1:+61344890 | MS.gene056036:CDS |
| TCTCTACTCCATCCTCCTTC+TGG | 0.313005 | 1.1:-61347653 | None:intergenic |
| TCCCCTGAATCATTATCATT+TGG | 0.324090 | 1.1:-61346091 | None:intergenic |
| GTATCGAATTTCTAATTTAC+GGG | 0.328738 | 1.1:-61346686 | None:intergenic |
| GGCCTTCGATTTCTTCCCTT+TGG | 0.338225 | 1.1:-61347748 | None:intergenic |
| ACCAAGCTCTAATCATGTTT+GGG | 0.343110 | 1.1:+61344891 | MS.gene056036:CDS |
| GTAAAGTTCTTCATCAAATT+GGG | 0.357931 | 1.1:-61345002 | None:intergenic |
| TATGCTTACTCGCTTGAGTT+TGG | 0.360842 | 1.1:-61343748 | None:intergenic |
| GTCCTTAGGCCATTCATGTT+TGG | 0.363259 | 1.1:+61347684 | MS.gene056036:CDS |
| CAATCTCTTCCGTGTAGAAA+AGG | 0.380485 | 1.1:+61343488 | MS.gene056036:CDS |
| TACGATGGAAACAATTTGAT+AGG | 0.382311 | 1.1:-61346551 | None:intergenic |
| TCTCATGGTCGGGATACTTT+AGG | 0.390122 | 1.1:+61346016 | MS.gene056036:CDS |
| TCCACATGATTCTTGAGCTT+CGG | 0.390757 | 1.1:-61344132 | None:intergenic |
| AATTCTAAATTGGAAACCAT+TGG | 0.410473 | 1.1:+61343938 | MS.gene056036:CDS |
| GAGATAGCTGATTTGAAGAA+AGG | 0.411201 | 1.1:+61344171 | MS.gene056036:CDS |
| CTTTGGCTTCATTGTTCGGT+TGG | 0.412270 | 1.1:-61347731 | None:intergenic |
| ATGAATGGCCTAAGGACTTC+TGG | 0.414262 | 1.1:-61347678 | None:intergenic |
| ACGTCTTTCTTGATGAAGAA+TGG | 0.419469 | 1.1:-61344956 | None:intergenic |
| GAATTTCTAATTTACGGGCT+TGG | 0.419762 | 1.1:-61346681 | None:intergenic |
| GTAGTCTGTACAATTTGAAC+AGG | 0.430316 | 1.1:-61346659 | None:intergenic |
| TCTTGCTTTCGTAAAGAAGC+TGG | 0.438723 | 1.1:+61345992 | MS.gene056036:CDS |
| ATGATAGGAGCCGATGTTGC+TGG | 0.453917 | 1.1:+61344827 | MS.gene056036:intron |
| GCCGATGTTGCTGGAGGTAG+AGG | 0.459004 | 1.1:+61344836 | MS.gene056036:CDS |
| TTGTTCGGTTGGTTCTTGAA+TGG | 0.460611 | 1.1:-61347720 | None:intergenic |
| ACTGCTCCACCTTCTCGAAC+TGG | 0.468726 | 1.1:-61346054 | None:intergenic |
| CTTCTTTAGGTAACCGGGGA+AGG | 0.469820 | 1.1:+61345786 | MS.gene056036:intron |
| TTGGGCTAGTTGAGCACACT+TGG | 0.471518 | 1.1:-61344984 | None:intergenic |
| ACAATCTTGTTGTCCGAACA+TGG | 0.475085 | 1.1:+61344091 | MS.gene056036:CDS |
| TAGAGATACCAGAAGTCCTT+AGG | 0.475235 | 1.1:+61347670 | MS.gene056036:CDS |
| TCGGTTGGTTCTTGAATGGC+AGG | 0.477198 | 1.1:-61347716 | None:intergenic |
| CATGCTTGCTGTAGGTATGC+TGG | 0.481103 | 1.1:+61345962 | MS.gene056036:intron |
| GCCCAAACATGATTAGAGCT+TGG | 0.483827 | 1.1:-61344892 | None:intergenic |
| TTATCAATCTCGACAAAGAA+TGG | 0.490410 | 1.1:+61343580 | MS.gene056036:CDS |
| GAGATTCACGGATGATTTCA+GGG | 0.494661 | 1.1:-61343518 | None:intergenic |
| CCTTCTCGAACTGGTGAACT+CGG | 0.504962 | 1.1:-61346045 | None:intergenic |
| TTCCAGCTTCTAAAACATAC+CGG | 0.507203 | 1.1:+61346626 | MS.gene056036:CDS |
| ACAAACCTCATCATTGCTGA+TGG | 0.508461 | 1.1:-61343984 | None:intergenic |
| ATTTGATGAAGAACTTTACA+AGG | 0.508998 | 1.1:+61345006 | MS.gene056036:CDS |
| TTCCAAACATGAATGGCCTA+AGG | 0.510108 | 1.1:-61347686 | None:intergenic |
| AATCTCTTCCGTGTAGAAAA+GGG | 0.512839 | 1.1:+61343489 | MS.gene056036:CDS |
| CGAGTTTATTTCTAAATCTG+AGG | 0.522194 | 1.1:+61343856 | MS.gene056036:CDS |
| GTTCTCTAGTATGCAGCAAA+TGG | 0.522458 | 1.1:-61347628 | None:intergenic |
| CAAGTTACCTTAGGGGTAGA+CGG | 0.525382 | 1.1:-61345884 | None:intergenic |
| CCCCAAATGATAATGATTCA+GGG | 0.525499 | 1.1:+61346089 | MS.gene056036:CDS |
| CGTAAAGAAGCTGGATCTCA+TGG | 0.526898 | 1.1:+61346001 | MS.gene056036:CDS |
| AACGACGGCGTTGAGATTCA+CGG | 0.531799 | 1.1:-61343530 | None:intergenic |
| ATCCTACCCGTCTACCCCTA+AGG | 0.539398 | 1.1:+61345877 | MS.gene056036:CDS |
| AATTCGATACGGACAGAAGA+AGG | 0.542480 | 1.1:+61346699 | MS.gene056036:CDS |
| ATACTTATCATCTCCTTCCC+CGG | 0.545996 | 1.1:-61345799 | None:intergenic |
| GAGAACAACCAGAAGGAGGA+TGG | 0.546439 | 1.1:+61347645 | MS.gene056036:CDS |
| AAGTTACCTTAGGGGTAGAC+GGG | 0.552419 | 1.1:-61345883 | None:intergenic |
| AACCGAACAATGAAGCCAAA+GGG | 0.552476 | 1.1:+61347733 | MS.gene056036:CDS |
| CAACCGAACAATGAAGCCAA+AGG | 0.552548 | 1.1:+61347732 | MS.gene056036:CDS |
| ACCTCTACCTCCAGCAACAT+CGG | 0.553887 | 1.1:-61344837 | None:intergenic |
| AGAAGCTGGATCTCATGGTC+GGG | 0.554511 | 1.1:+61346006 | MS.gene056036:CDS |
| TTCGTCAACTACTTCGACGC+TGG | 0.554815 | 1.1:-61343556 | None:intergenic |
| GTGCATATCATTCAGACGAA+TGG | 0.559096 | 1.1:+61345850 | MS.gene056036:CDS |
| AGTTCACCAGTTCGAGAAGG+TGG | 0.559770 | 1.1:+61346048 | MS.gene056036:CDS |
| TTTGTTGAACTCCACTCTCA+CGG | 0.563048 | 1.1:+61347593 | MS.gene056036:CDS |
| TTCTAAAACATACCGGGAGT+TGG | 0.563603 | 1.1:+61346633 | MS.gene056036:CDS |
| TTAGGGGTAGACGGGTAGGA+TGG | 0.567147 | 1.1:-61345875 | None:intergenic |
| CCTTTCAGTAGCCGTGAGAG+TGG | 0.571162 | 1.1:-61347604 | None:intergenic |
| CAATCTTGTTGTCCGAACAT+GGG | 0.572903 | 1.1:+61344092 | MS.gene056036:CDS |
| CCCTGAATCATTATCATTTG+GGG | 0.574936 | 1.1:-61346089 | None:intergenic |
| AAGAAGCTGGATCTCATGGT+CGG | 0.582102 | 1.1:+61346005 | MS.gene056036:CDS |
| ACGATGGAAACAATTTGATA+GGG | 0.582357 | 1.1:-61346550 | None:intergenic |
| GGTTTCTATCTCAAAGGAGA+TGG | 0.585776 | 1.1:+61344857 | MS.gene056036:CDS |
| TCCAGCTTCTAAAACATACC+GGG | 0.587910 | 1.1:+61346627 | MS.gene056036:CDS |
| CTCAGATTTAGAAATAAACT+CGG | 0.588681 | 1.1:-61343855 | None:intergenic |
| CCACTCTCACGGCTACTGAA+AGG | 0.590045 | 1.1:+61347604 | MS.gene056036:CDS |
| CCGAGTTCACCAGTTCGAGA+AGG | 0.591093 | 1.1:+61346045 | MS.gene056036:CDS |
| GGTAGAGGTTTCTATCTCAA+AGG | 0.591210 | 1.1:+61344851 | MS.gene056036:CDS |
| TTTCCAATTTAGAATTCAAG+AGG | 0.592409 | 1.1:-61343931 | None:intergenic |
| ATCATGAACGAGGTTTCCAA+TGG | 0.592505 | 1.1:-61343954 | None:intergenic |
| TGTTCCCATCAGCAATGATG+AGG | 0.598513 | 1.1:+61343979 | MS.gene056036:CDS |
| TTGAACAGGACACCAACTCC+CGG | 0.599169 | 1.1:-61346645 | None:intergenic |
| AATCTTGTTGTCCGAACATG+GGG | 0.604845 | 1.1:+61344093 | MS.gene056036:CDS |
| CGTAAATTAGAAATTCGATA+CGG | 0.619082 | 1.1:+61346688 | MS.gene056036:CDS |
| TAGATCATACTTCTTAGCTG+CGG | 0.628252 | 1.1:-61346593 | None:intergenic |
| CAAACCTCATCATTGCTGAT+GGG | 0.630129 | 1.1:-61343983 | None:intergenic |
| CCCAAATGATAATGATTCAG+GGG | 0.633197 | 1.1:+61346090 | MS.gene056036:CDS |
| CTAAATTCAAGTTACCTTAG+GGG | 0.638039 | 1.1:-61345891 | None:intergenic |
| TACCTTAGGGGTAGACGGGT+AGG | 0.642685 | 1.1:-61345879 | None:intergenic |
| TGATTCAGGGGACATGCATG+AGG | 0.647287 | 1.1:+61346102 | MS.gene056036:CDS |
| AGAAGTATGATCTAGAAGCA+TGG | 0.654923 | 1.1:+61346602 | MS.gene056036:CDS |
| GTTCAAAGCTCCAGATACGA+TGG | 0.655676 | 1.1:-61346566 | None:intergenic |
| AGCCAAAGGGAAGAAATCGA+AGG | 0.662628 | 1.1:+61347746 | MS.gene056036:CDS |
| ACCGAAGCTCAAGAATCATG+TGG | 0.667853 | 1.1:+61344131 | MS.gene056036:CDS |
| CTCTGAGGACTTCTACAAAG+CGG | 0.670185 | 1.1:+61346138 | MS.gene056036:CDS |
| ACTAGAGAACAACCAGAAGG+AGG | 0.673239 | 1.1:+61347641 | MS.gene056036:CDS |
| ATAGGAGCCGATGTTGCTGG+AGG | 0.692103 | 1.1:+61344830 | MS.gene056036:intron |
| CTTCGACGCTGGCAAAACGA+CGG | 0.699893 | 1.1:-61343545 | None:intergenic |
| AGAAGTCAACAAAATCAACA+AGG | 0.710411 | 1.1:+61343719 | MS.gene056036:CDS |
| CATACTAGAGAACAACCAGA+AGG | 0.710513 | 1.1:+61347638 | MS.gene056036:CDS |
| TGGGAACAGAATCATGAACG+AGG | 0.772919 | 1.1:-61343964 | None:intergenic |
| TCTGAATGATATGCACACAG+AGG | 0.783230 | 1.1:-61345843 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATCTAAAAAACAAATTATA+AGG | - | chr1.1:61345148-61345167 | None:intergenic | 10.0% |
| !! | TACATGTTTAATATTAAAAT+TGG | + | chr1.1:61345915-61345934 | MS.gene056036:intron | 10.0% |
| !! | ATATTAGATACATTCAAAAT+AGG | - | chr1.1:61344787-61344806 | None:intergenic | 15.0% |
| !! | ATTCCAAAAAAATTTAAACA+AGG | - | chr1.1:61346958-61346977 | None:intergenic | 15.0% |
| !! | CTTATAATTGAATTCTTATA+AGG | - | chr1.1:61345070-61345089 | None:intergenic | 15.0% |
| !! | TTATATAAATTGATATAACG+AGG | - | chr1.1:61346847-61346866 | None:intergenic | 15.0% |
| !! | TTCACTATAATTAATAATGA+TGG | - | chr1.1:61345586-61345605 | None:intergenic | 15.0% |
| !!! | AAGAAGTTTTTATTTTTTTG+TGG | + | chr1.1:61345605-61345624 | MS.gene056036:intron | 15.0% |
| !!! | CACTTTTACATTATATTTTA+AGG | - | chr1.1:61344613-61344632 | None:intergenic | 15.0% |
| !!! | GATAATTGTTTTTTAATCTT+GGG | + | chr1.1:61345937-61345956 | MS.gene056036:intron | 15.0% |
| !!! | TATATAATATAGTTTTGGTA+TGG | + | chr1.1:61346224-61346243 | MS.gene056036:intron | 15.0% |
| !!! | TATCCTTGTTTAAATTTTTT+TGG | + | chr1.1:61346952-61346971 | MS.gene056036:intron | 15.0% |
| !!! | TATTCTAAGAATATTAAACA+AGG | - | chr1.1:61347343-61347362 | None:intergenic | 15.0% |
| !!! | TCATAATTTTTTTAACTGTT+AGG | + | chr1.1:61347517-61347536 | MS.gene056036:intron | 15.0% |
| !! | AAAATAAGCAAAACATGATT+AGG | - | chr1.1:61343669-61343688 | None:intergenic | 20.0% |
| !! | CTTTAGATTAATTTAACACT+GGG | - | chr1.1:61346259-61346278 | None:intergenic | 20.0% |
| !! | TCATTGAAAAATGAAACTTA+GGG | + | chr1.1:61345546-61345565 | MS.gene056036:intron | 20.0% |
| !!! | AAATTTTGTATTACATCACT+TGG | + | chr1.1:61346420-61346439 | MS.gene056036:intron | 20.0% |
| !!! | AATCATGTTTTGCTTATTTT+AGG | + | chr1.1:61343669-61343688 | MS.gene056036:intron | 20.0% |
| !!! | CTTTAATATTTTGTGAGATT+TGG | + | chr1.1:61344252-61344271 | MS.gene056036:intron | 20.0% |
| !!! | GCAAATAAAGTTATTGATTT+GGG | - | chr1.1:61346456-61346475 | None:intergenic | 20.0% |
| !!! | GGATAATTGTTTTTTAATCT+TGG | + | chr1.1:61345936-61345955 | MS.gene056036:intron | 20.0% |
| !!! | TAGAATAATTTAGTTTGTGA+TGG | + | chr1.1:61347066-61347085 | MS.gene056036:intron | 20.0% |
| !!! | TTGTTTTCAAATTCAATGTA+TGG | + | chr1.1:61344385-61344404 | MS.gene056036:intron | 20.0% |
| !!! | TTTTTGTATTATACTCTTTC+TGG | + | chr1.1:61345368-61345387 | MS.gene056036:intron | 20.0% |
| ! | AAAATATCAACTATATACCG+AGG | - | chr1.1:61345107-61345126 | None:intergenic | 25.0% |
| ! | AAACCTCTTGAATTCTAAAT+TGG | + | chr1.1:61343928-61343947 | MS.gene056036:CDS | 25.0% |
| ! | AATTCTAAATTGGAAACCAT+TGG | + | chr1.1:61343938-61343957 | MS.gene056036:CDS | 25.0% |
| ! | AATTGTTTCATGTGTGTTAT+AGG | + | chr1.1:61344485-61344504 | MS.gene056036:intron | 25.0% |
| ! | AGGAAGAATTTAGAAATTTC+AGG | - | chr1.1:61347266-61347285 | None:intergenic | 25.0% |
| ! | AGTGTTTGTATTGAAATTCA+TGG | + | chr1.1:61344047-61344066 | MS.gene056036:intron | 25.0% |
| ! | AGTTTAACTGCAGAATATAT+TGG | - | chr1.1:61347116-61347135 | None:intergenic | 25.0% |
| ! | ATACCTAAGTTCAATATTGT+TGG | + | chr1.1:61346727-61346746 | MS.gene056036:intron | 25.0% |
| ! | ATATTGCTCAAGTAAAAACA+TGG | - | chr1.1:61347452-61347471 | None:intergenic | 25.0% |
| ! | ATTTATATAACCCATTCTTC+TGG | + | chr1.1:61346857-61346876 | MS.gene056036:intron | 25.0% |
| ! | ATTTGATGAAGAACTTTACA+AGG | + | chr1.1:61345006-61345025 | MS.gene056036:CDS | 25.0% |
| ! | CCAGTGTTAAATTAATCTAA+AGG | + | chr1.1:61346257-61346276 | MS.gene056036:intron | 25.0% |
| ! | CCTTTAGATTAATTTAACAC+TGG | - | chr1.1:61346260-61346279 | None:intergenic | 25.0% |
| ! | CGTAAATTAGAAATTCGATA+CGG | + | chr1.1:61346688-61346707 | MS.gene056036:CDS | 25.0% |
| ! | CGTATCGAATTTCTAATTTA+CGG | - | chr1.1:61346690-61346709 | None:intergenic | 25.0% |
| ! | CTATTGTACAAATCATGAAT+AGG | - | chr1.1:61344523-61344542 | None:intergenic | 25.0% |
| ! | CTCAGATTTAGAAATAAACT+CGG | - | chr1.1:61343858-61343877 | None:intergenic | 25.0% |
| ! | GTAAAGTTCTTCATCAAATT+GGG | - | chr1.1:61345005-61345024 | None:intergenic | 25.0% |
| ! | GTATCGAATTTCTAATTTAC+GGG | - | chr1.1:61346689-61346708 | None:intergenic | 25.0% |
| ! | GTCATTGAAAAATGAAACTT+AGG | + | chr1.1:61345545-61345564 | MS.gene056036:intron | 25.0% |
| ! | GTGTTTGTATTGAAATTCAT+GGG | + | chr1.1:61344048-61344067 | MS.gene056036:intron | 25.0% |
| ! | TAACACACATGAAACAATTA+AGG | - | chr1.1:61344484-61344503 | None:intergenic | 25.0% |
| ! | TCAACATATATGAAGAACTT+GGG | - | chr1.1:61346823-61346842 | None:intergenic | 25.0% |
| ! | TGTAAAGTTCTTCATCAAAT+TGG | - | chr1.1:61345006-61345025 | None:intergenic | 25.0% |
| ! | TTAGAAATTTCAGGAAGAAT+GGG | - | chr1.1:61347257-61347276 | None:intergenic | 25.0% |
| ! | TTAGAAATTTCCAGAAGAAT+GGG | - | chr1.1:61346870-61346889 | None:intergenic | 25.0% |
| ! | TTCAACATATATGAAGAACT+TGG | - | chr1.1:61346824-61346843 | None:intergenic | 25.0% |
| ! | TTCAATAGTTTCTACATTTC+TGG | + | chr1.1:61344754-61344773 | MS.gene056036:intron | 25.0% |
| ! | TTCACACTTACTAAGAAATT+TGG | + | chr1.1:61345418-61345437 | MS.gene056036:intron | 25.0% |
| ! | TTTAGAAATTTCAGGAAGAA+TGG | - | chr1.1:61347258-61347277 | None:intergenic | 25.0% |
| ! | TTTAGAAATTTCCAGAAGAA+TGG | - | chr1.1:61346871-61346890 | None:intergenic | 25.0% |
| ! | TTTCAAATTCAATGTATGGT+GGG | + | chr1.1:61344389-61344408 | MS.gene056036:intron | 25.0% |
| !! | AAAGTTTTTCCAAACATGAA+TGG | - | chr1.1:61347696-61347715 | None:intergenic | 25.0% |
| !! | AACTAAATTCAAGTTACCTT+AGG | - | chr1.1:61345896-61345915 | None:intergenic | 25.0% |
| !! | AAGAAGTTATTCTAAAGAGA+GGG | + | chr1.1:61346786-61346805 | MS.gene056036:intron | 25.0% |
| !! | ACTAAATTCAAGTTACCTTA+GGG | - | chr1.1:61345895-61345914 | None:intergenic | 25.0% |
| !! | AGGATTTTCTTTTCTTCTTT+AGG | + | chr1.1:61345773-61345792 | MS.gene056036:intron | 25.0% |
| !! | CAATAATGTTATTTGCAGTT+TGG | - | chr1.1:61345195-61345214 | None:intergenic | 25.0% |
| !! | CATGGGATAATATATGTTTT+AGG | + | chr1.1:61344065-61344084 | MS.gene056036:intron | 25.0% |
| !! | CCTTTGGAAAAATTGAAAAA+TGG | - | chr1.1:61345289-61345308 | None:intergenic | 25.0% |
| !! | GGCAAATAAAGTTATTGATT+TGG | - | chr1.1:61346457-61346476 | None:intergenic | 25.0% |
| !! | TAAGAAGTTATTCTAAAGAG+AGG | + | chr1.1:61346785-61346804 | MS.gene056036:intron | 25.0% |
| !! | TCTTGTTATAAAGTTAAGTG+AGG | - | chr1.1:61345320-61345339 | None:intergenic | 25.0% |
| !! | TTTCCAATTTAGAATTCAAG+AGG | - | chr1.1:61343934-61343953 | None:intergenic | 25.0% |
| !! | TTTTCAAATTCAATGTATGG+TGG | + | chr1.1:61344388-61344407 | MS.gene056036:intron | 25.0% |
| !!! | AACAACGTTTTTGTTTTTTG+AGG | - | chr1.1:61344424-61344443 | None:intergenic | 25.0% |
| !!! | AATAATTTAGTTTGTGATGG+TGG | + | chr1.1:61347069-61347088 | MS.gene056036:intron | 25.0% |
| !!! | ACAACTAAAAGAAAAGTGTT+GGG | - | chr1.1:61344455-61344474 | None:intergenic | 25.0% |
| !!! | CCATTTTTCAATTTTTCCAA+AGG | + | chr1.1:61345286-61345305 | MS.gene056036:intron | 25.0% |
| !!! | TGATTTTGTTGACTTCTTTA+CGG | - | chr1.1:61343716-61343735 | None:intergenic | 25.0% |
| !!! | TGTTTCTTTTTTCTGTTGAT+TGG | + | chr1.1:61345218-61345237 | MS.gene056036:intron | 25.0% |
| AAATCAGAGGAAAAAGATTG+GGG | - | chr1.1:61345742-61345761 | None:intergenic | 30.0% | |
| AAGCCAACAATATTGAACTT+AGG | - | chr1.1:61346733-61346752 | None:intergenic | 30.0% | |
| ACATGAAACAATTAAGGAAG+CGG | - | chr1.1:61344478-61344497 | None:intergenic | 30.0% | |
| ACGATGGAAACAATTTGATA+GGG | - | chr1.1:61346553-61346572 | None:intergenic | 30.0% | |
| ACTGTGATTACAAAAACAAG+AGG | - | chr1.1:61344307-61344326 | None:intergenic | 30.0% | |
| AGAAGTCAACAAAATCAACA+AGG | + | chr1.1:61343719-61343738 | MS.gene056036:CDS | 30.0% | |
| AGATGCATTAAACATTCCTT+TGG | - | chr1.1:61346325-61346344 | None:intergenic | 30.0% | |
| AGTATTATTCGCTAACTGTT+GGG | + | chr1.1:61347153-61347172 | MS.gene056036:intron | 30.0% | |
| CAAATCAGAGGAAAAAGATT+GGG | - | chr1.1:61345743-61345762 | None:intergenic | 30.0% | |
| CTTAGAATAACTGTCATTGA+TGG | + | chr1.1:61347354-61347373 | MS.gene056036:intron | 30.0% | |
| GAAAAAGATTGCTGAAAAAG+AGG | + | chr1.1:61343886-61343905 | MS.gene056036:CDS | 30.0% | |
| TAACATAAAAAGCTTCAGCT+GGG | - | chr1.1:61344688-61344707 | None:intergenic | 30.0% | |
| TACGATGGAAACAATTTGAT+AGG | - | chr1.1:61346554-61346573 | None:intergenic | 30.0% | |
| TAGTATTATTCGCTAACTGT+TGG | + | chr1.1:61347152-61347171 | MS.gene056036:intron | 30.0% | |
| TCAAATCAGAGGAAAAAGAT+TGG | - | chr1.1:61345744-61345763 | None:intergenic | 30.0% | |
| TTAGATGCTTCTGCTTAAAA+TGG | - | chr1.1:61345397-61345416 | None:intergenic | 30.0% | |
| TTAGTTCCTATCTTCTGTAT+TGG | + | chr1.1:61346376-61346395 | MS.gene056036:intron | 30.0% | |
| TTATCAATCTCGACAAAGAA+TGG | + | chr1.1:61343580-61343599 | MS.gene056036:CDS | 30.0% | |
| TTCAAATTCAATGTATGGTG+GGG | + | chr1.1:61344390-61344409 | MS.gene056036:intron | 30.0% | |
| TTCAATGACTCTTATTCTCA+TGG | - | chr1.1:61345534-61345553 | None:intergenic | 30.0% | |
| TTTCATCGAAATTGCTTCTT+AGG | - | chr1.1:61345504-61345523 | None:intergenic | 30.0% | |
| ! | AGAAGTTATTCTAAAGAGAG+GGG | + | chr1.1:61346787-61346806 | MS.gene056036:intron | 30.0% |
| ! | CATGTTATTTGATGCATGAT+AGG | + | chr1.1:61344812-61344831 | MS.gene056036:intron | 30.0% |
| ! | CTAAATTCAAGTTACCTTAG+GGG | - | chr1.1:61345894-61345913 | None:intergenic | 30.0% |
| ! | CTTTATAACAAGAAGCATAC+TGG | + | chr1.1:61345327-61345346 | MS.gene056036:intron | 30.0% |
| ! | CTTTTTATGTTAGTCACCTA+TGG | + | chr1.1:61344696-61344715 | MS.gene056036:intron | 30.0% |
| ! | GACAACTAAAAGAAAAGTGT+TGG | - | chr1.1:61344456-61344475 | None:intergenic | 30.0% |
| ! | TCAAAAGTTATTCTAGAGAG+AGG | + | chr1.1:61347176-61347195 | MS.gene056036:intron | 30.0% |
| ! | TCTTTTCTTCTTTAGGTAAC+CGG | + | chr1.1:61345780-61345799 | MS.gene056036:intron | 30.0% |
| ! | TTTGGAATAATTGTCAGTGA+TGG | + | chr1.1:61346970-61346989 | MS.gene056036:intron | 30.0% |
| !! | AAAGAAAAGTGTTGGGTAAA+AGG | - | chr1.1:61344448-61344467 | None:intergenic | 30.0% |
| !! | AAGAAAAGTGTTGGGTAAAA+GGG | - | chr1.1:61344447-61344466 | None:intergenic | 30.0% |
| !! | ATGAAACTTAGGGCTATTTT+AGG | + | chr1.1:61345556-61345575 | MS.gene056036:intron | 30.0% |
| !! | CGAGTTTATTTCTAAATCTG+AGG | + | chr1.1:61343856-61343875 | MS.gene056036:CDS | 30.0% |
| !!! | ATTTTGTTTCTGTGTGTGTT+AGG | + | chr1.1:61343817-61343836 | MS.gene056036:intron | 30.0% |
| !!! | CATGTTTGGGCTTAATTTTT+TGG | + | chr1.1:61344904-61344923 | MS.gene056036:CDS | 30.0% |
| !!! | TTTTGTTTCTGTGTGTGTTA+GGG | + | chr1.1:61343818-61343837 | MS.gene056036:intron | 30.0% |
| AAGGACACCTAGATCAATAA+TGG | - | chr1.1:61345051-61345070 | None:intergenic | 35.0% | |
| AAGTGAGGAAATCATTCCTT+TGG | - | chr1.1:61345305-61345324 | None:intergenic | 35.0% | |
| AATCAGAGGAAAAAGATTGG+GGG | - | chr1.1:61345741-61345760 | None:intergenic | 35.0% | |
| AATCTCTTCCGTGTAGAAAA+GGG | + | chr1.1:61343489-61343508 | MS.gene056036:CDS | 35.0% | |
| ACGTCTTTCTTGATGAAGAA+TGG | - | chr1.1:61344959-61344978 | None:intergenic | 35.0% | |
| AGAATAACTGTCATTGATGG+TGG | + | chr1.1:61347357-61347376 | MS.gene056036:intron | 35.0% | |
| ATTCTGCAGTTAAACTCTGA+TGG | + | chr1.1:61347120-61347139 | MS.gene056036:intron | 35.0% | |
| CAAATTGTTTCCATCGTATC+TGG | + | chr1.1:61346556-61346575 | MS.gene056036:CDS | 35.0% | |
| CATGTCAAAGACATAACAGT+GGG | - | chr1.1:61346288-61346307 | None:intergenic | 35.0% | |
| CCCCTGAATCATTATCATTT+GGG | - | chr1.1:61346093-61346112 | None:intergenic | 35.0% | |
| CCCTGAATCATTATCATTTG+GGG | - | chr1.1:61346092-61346111 | None:intergenic | 35.0% | |
| CCCTGTATATGTTAGAATCT+CGG | + | chr1.1:61347214-61347233 | MS.gene056036:intron | 35.0% | |
| CCGAGATTCTAACATATACA+GGG | - | chr1.1:61347217-61347236 | None:intergenic | 35.0% | |
| CTAACATAAAAAGCTTCAGC+TGG | - | chr1.1:61344689-61344708 | None:intergenic | 35.0% | |
| CTTAGATAAGCTCAAATCAG+AGG | - | chr1.1:61345755-61345774 | None:intergenic | 35.0% | |
| GAATTTCTAATTTACGGGCT+TGG | - | chr1.1:61346684-61346703 | None:intergenic | 35.0% | |
| GAGTAACCAATACAGAAGAT+AGG | - | chr1.1:61346385-61346404 | None:intergenic | 35.0% | |
| GTAGTCTGTACAATTTGAAC+AGG | - | chr1.1:61346662-61346681 | None:intergenic | 35.0% | |
| GTTCACTCCATTATTGATCT+AGG | + | chr1.1:61345041-61345060 | MS.gene056036:intron | 35.0% | |
| TAATGGAGGGAAGATTATGA+AGG | - | chr1.1:61346175-61346194 | None:intergenic | 35.0% | |
| TAGATCATACTTCTTAGCTG+CGG | - | chr1.1:61346596-61346615 | None:intergenic | 35.0% | |
| TCCCCTGAATCATTATCATT+TGG | - | chr1.1:61346094-61346113 | None:intergenic | 35.0% | |
| TCCGAGATTCTAACATATAC+AGG | - | chr1.1:61347218-61347237 | None:intergenic | 35.0% | |
| TGTAAACAGAAGATGAAGAG+AGG | - | chr1.1:61343629-61343648 | None:intergenic | 35.0% | |
| TGTTTCAACTGCAGTAGATA+AGG | + | chr1.1:61344729-61344748 | MS.gene056036:intron | 35.0% | |
| TTAATGCTTACATTCGAGAC+TGG | + | chr1.1:61345654-61345673 | MS.gene056036:intron | 35.0% | |
| TTCCTTTGGTTAGACATGTT+TGG | - | chr1.1:61346311-61346330 | None:intergenic | 35.0% | |
| ! | AAAGTTATTCTAGAGAGAGG+AGG | + | chr1.1:61347179-61347198 | MS.gene056036:intron | 35.0% |
| ! | AACCAAGCTCTAATCATGTT+TGG | + | chr1.1:61344890-61344909 | MS.gene056036:CDS | 35.0% |
| ! | AAGTTATTCTAGAGAGAGGA+GGG | + | chr1.1:61347180-61347199 | MS.gene056036:intron | 35.0% |
| ! | ACCAAGCTCTAATCATGTTT+GGG | + | chr1.1:61344891-61344910 | MS.gene056036:CDS | 35.0% |
| ! | ACCCCAAATGATAATGATTC+AGG | + | chr1.1:61346088-61346107 | MS.gene056036:CDS | 35.0% |
| ! | AGAAGTATGATCTAGAAGCA+TGG | + | chr1.1:61346602-61346621 | MS.gene056036:CDS | 35.0% |
| ! | CCCAAATGATAATGATTCAG+GGG | + | chr1.1:61346090-61346109 | MS.gene056036:CDS | 35.0% |
| ! | CCCCAAATGATAATGATTCA+GGG | + | chr1.1:61346089-61346108 | MS.gene056036:CDS | 35.0% |
| ! | CTCTGATTTGAGCTTATCTA+AGG | + | chr1.1:61345753-61345772 | MS.gene056036:intron | 35.0% |
| ! | CTTTTCTTCTTTAGGTAACC+GGG | + | chr1.1:61345781-61345800 | MS.gene056036:intron | 35.0% |
| ! | GAAGTTATTCTAAAGAGAGG+GGG | + | chr1.1:61346788-61346807 | MS.gene056036:intron | 35.0% |
| ! | GAATAACTGTCATTGATGGT+GGG | + | chr1.1:61347358-61347377 | MS.gene056036:intron | 35.0% |
| ! | GAGATTTGGAATGTGATTCT+GGG | + | chr1.1:61344266-61344285 | MS.gene056036:intron | 35.0% |
| ! | TGAGATTTGGAATGTGATTC+TGG | + | chr1.1:61344265-61344284 | MS.gene056036:intron | 35.0% |
| ! | TTCTTTCTTTTTCTGCTGAC+TGG | + | chr1.1:61346891-61346910 | MS.gene056036:intron | 35.0% |
| ! | TTTTCTTCTTTAGGTAACCG+GGG | + | chr1.1:61345782-61345801 | MS.gene056036:intron | 35.0% |
| !! | ACAGTAGCTATTTGTTTTCG+TGG | + | chr1.1:61344322-61344341 | MS.gene056036:intron | 35.0% |
| !! | GAGATAGCTGATTTGAAGAA+AGG | + | chr1.1:61344171-61344190 | MS.gene056036:CDS | 35.0% |
| !! | TTCCAGCTTCTAAAACATAC+CGG | + | chr1.1:61346626-61346645 | MS.gene056036:CDS | 35.0% |
| !!! | CTTAATTTTTTGGCGGAAAG+GGG | + | chr1.1:61344914-61344933 | MS.gene056036:CDS | 35.0% |
| !!! | GCTTAATTTTTTGGCGGAAA+GGG | + | chr1.1:61344913-61344932 | MS.gene056036:CDS | 35.0% |
| !!! | GTTTGGGCTTAATTTTTTGG+CGG | + | chr1.1:61344907-61344926 | MS.gene056036:CDS | 35.0% |
| AAACAGAAGATGAAGAGAGG+AGG | - | chr1.1:61343626-61343645 | None:intergenic | 40.0% | |
| AACCGAACAATGAAGCCAAA+GGG | + | chr1.1:61347733-61347752 | MS.gene056036:CDS | 40.0% | |
| AAGACATGTTAGTGATGCCT+CGG | + | chr1.1:61345087-61345106 | MS.gene056036:intron | 40.0% | |
| AATTCGATACGGACAGAAGA+AGG | + | chr1.1:61346699-61346718 | MS.gene056036:CDS | 40.0% | |
| ACAAACCTCATCATTGCTGA+TGG | - | chr1.1:61343987-61344006 | None:intergenic | 40.0% | |
| ACAACACCTCCATCTCTTAA+TGG | - | chr1.1:61346192-61346211 | None:intergenic | 40.0% | |
| ATACTTATCATCTCCTTCCC+CGG | - | chr1.1:61345802-61345821 | None:intergenic | 40.0% | |
| ATCAGAGGAAAAAGATTGGG+GGG | - | chr1.1:61345740-61345759 | None:intergenic | 40.0% | |
| ATCATGAACGAGGTTTCCAA+TGG | - | chr1.1:61343957-61343976 | None:intergenic | 40.0% | |
| ATCTTCCCTCCATTAAGAGA+TGG | + | chr1.1:61346180-61346199 | MS.gene056036:intron | 40.0% | |
| CAAACCTCATCATTGCTGAT+GGG | - | chr1.1:61343986-61344005 | None:intergenic | 40.0% | |
| CAAAGAAGCTATCTTTGTCG+TGG | - | chr1.1:61345253-61345272 | None:intergenic | 40.0% | |
| CAATCTCTTCCGTGTAGAAA+AGG | + | chr1.1:61343488-61343507 | MS.gene056036:CDS | 40.0% | |
| CATACTAGAGAACAACCAGA+AGG | + | chr1.1:61347638-61347657 | MS.gene056036:CDS | 40.0% | |
| GAAACACAACAGTGTTCCAT+AGG | - | chr1.1:61344715-61344734 | None:intergenic | 40.0% | |
| GAGATTCACGGATGATTTCA+GGG | - | chr1.1:61343521-61343540 | None:intergenic | 40.0% | |
| GATTGCTGAAAAAGAGGTTG+AGG | + | chr1.1:61343892-61343911 | MS.gene056036:CDS | 40.0% | |
| GCATGTCAAAGACATAACAG+TGG | - | chr1.1:61346289-61346308 | None:intergenic | 40.0% | |
| GGAAATGCTCAAAAACTCTG+AGG | + | chr1.1:61346123-61346142 | MS.gene056036:CDS | 40.0% | |
| GGAATAATTGTCAGTGATGG+CGG | + | chr1.1:61346973-61346992 | MS.gene056036:intron | 40.0% | |
| GGTAGAGGTTTCTATCTCAA+AGG | + | chr1.1:61344851-61344870 | MS.gene056036:CDS | 40.0% | |
| GGTTTCTATCTCAAAGGAGA+TGG | + | chr1.1:61344857-61344876 | MS.gene056036:CDS | 40.0% | |
| GTGCATATCATTCAGACGAA+TGG | + | chr1.1:61345850-61345869 | MS.gene056036:CDS | 40.0% | |
| GTTCTCTAGTATGCAGCAAA+TGG | - | chr1.1:61347631-61347650 | None:intergenic | 40.0% | |
| TACTTGACAGTGTCCAGATT+CGG | - | chr1.1:61344561-61344580 | None:intergenic | 40.0% | |
| TAGAGATACCAGAAGTCCTT+AGG | + | chr1.1:61347670-61347689 | MS.gene056036:CDS | 40.0% | |
| TATGCTTACTCGCTTGAGTT+TGG | - | chr1.1:61343751-61343770 | None:intergenic | 40.0% | |
| TCCACATGATTCTTGAGCTT+CGG | - | chr1.1:61344135-61344154 | None:intergenic | 40.0% | |
| TCTGAATGATATGCACACAG+AGG | - | chr1.1:61345846-61345865 | None:intergenic | 40.0% | |
| TCTTGCTTTCGTAAAGAAGC+TGG | + | chr1.1:61345992-61346011 | MS.gene056036:CDS | 40.0% | |
| TGAGATTCACGGATGATTTC+AGG | - | chr1.1:61343522-61343541 | None:intergenic | 40.0% | |
| TGCCAAACATGTCTAACCAA+AGG | + | chr1.1:61346306-61346325 | MS.gene056036:intron | 40.0% | |
| TGCTCTGCAACAGGATAAAA+GGG | - | chr1.1:61347548-61347567 | None:intergenic | 40.0% | |
| TTCCAAACATGAATGGCCTA+AGG | - | chr1.1:61347689-61347708 | None:intergenic | 40.0% | |
| TTGCTCTGCAACAGGATAAA+AGG | - | chr1.1:61347549-61347568 | None:intergenic | 40.0% | |
| TTTGTTGAACTCCACTCTCA+CGG | + | chr1.1:61347593-61347612 | MS.gene056036:CDS | 40.0% | |
| ! | AATCTTGTTGTCCGAACATG+GGG | + | chr1.1:61344093-61344112 | MS.gene056036:CDS | 40.0% |
| ! | ACAATCTTGTTGTCCGAACA+TGG | + | chr1.1:61344091-61344110 | MS.gene056036:CDS | 40.0% |
| ! | AGTTATTCTAGAGAGAGGAG+GGG | + | chr1.1:61347181-61347200 | MS.gene056036:intron | 40.0% |
| ! | CAATCTTGTTGTCCGAACAT+GGG | + | chr1.1:61344092-61344111 | MS.gene056036:CDS | 40.0% |
| ! | TAACAAGAAGCATACTGGCA+TGG | + | chr1.1:61345332-61345351 | MS.gene056036:intron | 40.0% |
| ! | TCAATGTATGGTGGGGTTAA+GGG | + | chr1.1:61344397-61344416 | MS.gene056036:intron | 40.0% |
| ! | TTCAATGTATGGTGGGGTTA+AGG | + | chr1.1:61344396-61344415 | MS.gene056036:intron | 40.0% |
| ! | TTCCCTTTGGCTTCATTGTT+CGG | - | chr1.1:61347738-61347757 | None:intergenic | 40.0% |
| ! | TTGTTCGGTTGGTTCTTGAA+TGG | - | chr1.1:61347723-61347742 | None:intergenic | 40.0% |
| !! | TCCAGCTTCTAAAACATACC+GGG | + | chr1.1:61346627-61346646 | MS.gene056036:CDS | 40.0% |
| !! | TTCTAAAACATACCGGGAGT+TGG | + | chr1.1:61346633-61346652 | MS.gene056036:CDS | 40.0% |
| !!! | CGTGGTAGCTAGTCTTTTTT+TGG | + | chr1.1:61344340-61344359 | MS.gene056036:intron | 40.0% |
| !!! | GGCTTAATTTTTTGGCGGAA+AGG | + | chr1.1:61344912-61344931 | MS.gene056036:CDS | 40.0% |
| AAAAGACCAGTCAGCAGAGA+AGG | - | chr1.1:61347286-61347305 | None:intergenic | 45.0% | |
| AAGAAGCTGGATCTCATGGT+CGG | + | chr1.1:61346005-61346024 | MS.gene056036:CDS | 45.0% | |
| AAGTTACCTTAGGGGTAGAC+GGG | - | chr1.1:61345886-61345905 | None:intergenic | 45.0% | |
| ACACCTCCATCTCTTAATGG+AGG | - | chr1.1:61346189-61346208 | None:intergenic | 45.0% | |
| ACCGAAGCTCAAGAATCATG+TGG | + | chr1.1:61344131-61344150 | MS.gene056036:CDS | 45.0% | |
| ACTAGAGAACAACCAGAAGG+AGG | + | chr1.1:61347641-61347660 | MS.gene056036:CDS | 45.0% | |
| ACTTGACAGTGTCCAGATTC+GGG | - | chr1.1:61344560-61344579 | None:intergenic | 45.0% | |
| AGCCAAAGGGAAGAAATCGA+AGG | + | chr1.1:61347746-61347765 | MS.gene056036:CDS | 45.0% | |
| ATGAATGGCCTAAGGACTTC+TGG | - | chr1.1:61347681-61347700 | None:intergenic | 45.0% | |
| ATGCTTACATTCGAGACTGG+AGG | + | chr1.1:61345657-61345676 | MS.gene056036:intron | 45.0% | |
| ATTCTTCCTTCTCTGCTGAC+TGG | + | chr1.1:61347277-61347296 | MS.gene056036:intron | 45.0% | |
| CAACCGAACAATGAAGCCAA+AGG | + | chr1.1:61347732-61347751 | MS.gene056036:CDS | 45.0% | |
| CAAGTTACCTTAGGGGTAGA+CGG | - | chr1.1:61345887-61345906 | None:intergenic | 45.0% | |
| CACCTCCATCTCTTAATGGA+GGG | - | chr1.1:61346188-61346207 | None:intergenic | 45.0% | |
| CGTAAAGAAGCTGGATCTCA+TGG | + | chr1.1:61346001-61346020 | MS.gene056036:CDS | 45.0% | |
| GCCCAAACATGATTAGAGCT+TGG | - | chr1.1:61344895-61344914 | None:intergenic | 45.0% | |
| GTCCTTAGGCCATTCATGTT+TGG | + | chr1.1:61347684-61347703 | MS.gene056036:CDS | 45.0% | |
| GTTCAAAGCTCCAGATACGA+TGG | - | chr1.1:61346569-61346588 | None:intergenic | 45.0% | |
| TCTCATGGTCGGGATACTTT+AGG | + | chr1.1:61346016-61346035 | MS.gene056036:CDS | 45.0% | |
| TGAAAAAGAGGTTGAGGCTC+AGG | + | chr1.1:61343898-61343917 | MS.gene056036:CDS | 45.0% | |
| TGCTTACATTCGAGACTGGA+GGG | + | chr1.1:61345658-61345677 | MS.gene056036:intron | 45.0% | |
| TGGGAACAGAATCATGAACG+AGG | - | chr1.1:61343967-61343986 | None:intergenic | 45.0% | |
| TGTTCCCATCAGCAATGATG+AGG | + | chr1.1:61343979-61343998 | MS.gene056036:CDS | 45.0% | |
| TTCCCTCCATTAAGAGATGG+AGG | + | chr1.1:61346183-61346202 | MS.gene056036:intron | 45.0% | |
| TTGGAATGTGATTCTGGGTC+AGG | + | chr1.1:61344271-61344290 | MS.gene056036:intron | 45.0% | |
| ! | CTCTGAGGACTTCTACAAAG+CGG | + | chr1.1:61346138-61346157 | MS.gene056036:CDS | 45.0% |
| ! | CTCTTTTCTCACCCCATGTT+CGG | - | chr1.1:61344107-61344126 | None:intergenic | 45.0% |
| ! | CTTTGGCTTCATTGTTCGGT+TGG | - | chr1.1:61347734-61347753 | None:intergenic | 45.0% |
| ! | GGTTGTGACCCTTTTCTACA+CGG | - | chr1.1:61343500-61343519 | None:intergenic | 45.0% |
| ! | TGTTTCTGTGTGTGTTAGGG+TGG | + | chr1.1:61343821-61343840 | MS.gene056036:intron | 45.0% |
| !!! | TCCCGGTATGTTTTAGAAGC+TGG | - | chr1.1:61346631-61346650 | None:intergenic | 45.0% |
| !! | AAAAAAAAAAAAAAAAAAAG+AGG | - | chr1.1:61346479-61346498 | None:intergenic | 5.0% |
| !! | AAAAAAAAAAAAAAAAAAGA+GGG | - | chr1.1:61346478-61346497 | None:intergenic | 5.0% |
| !!! | TATATTATATAATATAGTTT+TGG | + | chr1.1:61346219-61346238 | MS.gene056036:intron | 5.0% |
| ACCTCTACCTCCAGCAACAT+CGG | - | chr1.1:61344840-61344859 | None:intergenic | 50.0% | |
| ACTGCTCATTGCTCTGCAAC+AGG | - | chr1.1:61347557-61347576 | None:intergenic | 50.0% | |
| AGAAGCTGGATCTCATGGTC+GGG | + | chr1.1:61346006-61346025 | MS.gene056036:CDS | 50.0% | |
| AGCATACTGGCATGGTGCAA+TGG | + | chr1.1:61345340-61345359 | MS.gene056036:intron | 50.0% | |
| AGTGTCCAGATTCGGGATAG+TGG | - | chr1.1:61344553-61344572 | None:intergenic | 50.0% | |
| AGTTCACCAGTTCGAGAAGG+TGG | + | chr1.1:61346048-61346067 | MS.gene056036:CDS | 50.0% | |
| ATACTGGCATGGTGCAATGG+TGG | + | chr1.1:61345343-61345362 | MS.gene056036:intron | 50.0% | |
| ATGATAGGAGCCGATGTTGC+TGG | + | chr1.1:61344827-61344846 | MS.gene056036:intron | 50.0% | |
| CCTTCTCGAACTGGTGAACT+CGG | - | chr1.1:61346048-61346067 | None:intergenic | 50.0% | |
| CTTCTTTAGGTAACCGGGGA+AGG | + | chr1.1:61345786-61345805 | MS.gene056036:intron | 50.0% | |
| GAGAACAACCAGAAGGAGGA+TGG | + | chr1.1:61347645-61347664 | MS.gene056036:CDS | 50.0% | |
| GGCCTTCGATTTCTTCCCTT+TGG | - | chr1.1:61347751-61347770 | None:intergenic | 50.0% | |
| TCTCTACTCCATCCTCCTTC+TGG | - | chr1.1:61347656-61347675 | None:intergenic | 50.0% | |
| TGATTCAGGGGACATGCATG+AGG | + | chr1.1:61346102-61346121 | MS.gene056036:CDS | 50.0% | |
| TGTGATTCTGGGTCAGGATG+TGG | + | chr1.1:61344277-61344296 | MS.gene056036:intron | 50.0% | |
| TTCGTCAACTACTTCGACGC+TGG | - | chr1.1:61343559-61343578 | None:intergenic | 50.0% | |
| TTGAACAGGACACCAACTCC+CGG | - | chr1.1:61346648-61346667 | None:intergenic | 50.0% | |
| ! | AACGACGGCGTTGAGATTCA+CGG | - | chr1.1:61343533-61343552 | None:intergenic | 50.0% |
| ! | TCGGTTGGTTCTTGAATGGC+AGG | - | chr1.1:61347719-61347738 | None:intergenic | 50.0% |
| !! | CATGCTTGCTGTAGGTATGC+TGG | + | chr1.1:61345962-61345981 | MS.gene056036:intron | 50.0% |
| !! | CTTGGGAACATGCTTGCTGT+AGG | + | chr1.1:61345954-61345973 | MS.gene056036:intron | 50.0% |
| !! | TTGGGCTAGTTGAGCACACT+TGG | - | chr1.1:61344987-61345006 | None:intergenic | 50.0% |
| ACTGCTCCACCTTCTCGAAC+TGG | - | chr1.1:61346057-61346076 | None:intergenic | 55.0% | |
| ATAGGAGCCGATGTTGCTGG+AGG | + | chr1.1:61344830-61344849 | MS.gene056036:intron | 55.0% | |
| ATCCTACCCGTCTACCCCTA+AGG | + | chr1.1:61345877-61345896 | MS.gene056036:CDS | 55.0% | |
| CCACTCTCACGGCTACTGAA+AGG | + | chr1.1:61347604-61347623 | MS.gene056036:CDS | 55.0% | |
| CCGAGTTCACCAGTTCGAGA+AGG | + | chr1.1:61346045-61346064 | MS.gene056036:CDS | 55.0% | |
| CCTTTCAGTAGCCGTGAGAG+TGG | - | chr1.1:61347607-61347626 | None:intergenic | 55.0% | |
| CTTCGACGCTGGCAAAACGA+CGG | - | chr1.1:61343548-61343567 | None:intergenic | 55.0% | |
| TACCTTAGGGGTAGACGGGT+AGG | - | chr1.1:61345882-61345901 | None:intergenic | 55.0% | |
| TTAGGGGTAGACGGGTAGGA+TGG | - | chr1.1:61345878-61345897 | None:intergenic | 55.0% | |
| TTCCGCCACTATCCCGAATC+TGG | + | chr1.1:61344545-61344564 | MS.gene056036:intron | 55.0% | |
| ! | GTCCAGATTCGGGATAGTGG+CGG | - | chr1.1:61344550-61344569 | None:intergenic | 55.0% |
| GCCGATGTTGCTGGAGGTAG+AGG | + | chr1.1:61344836-61344855 | MS.gene056036:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 61343477 | 61347773 | 61343477 | ID=MS.gene056036 |
| chr1.1 | mRNA | 61343477 | 61347773 | 61343477 | ID=MS.gene056036.t1;Parent=MS.gene056036 |
| chr1.1 | exon | 61343477 | 61343609 | 61343477 | ID=MS.gene056036.t1.exon1;Parent=MS.gene056036.t1 |
| chr1.1 | CDS | 61343477 | 61343609 | 61343477 | ID=cds.MS.gene056036.t1;Parent=MS.gene056036.t1 |
| chr1.1 | exon | 61343691 | 61343761 | 61343691 | ID=MS.gene056036.t1.exon2;Parent=MS.gene056036.t1 |
| chr1.1 | CDS | 61343691 | 61343761 | 61343691 | ID=cds.MS.gene056036.t1;Parent=MS.gene056036.t1 |
| chr1.1 | exon | 61343839 | 61344000 | 61343839 | ID=MS.gene056036.t1.exon3;Parent=MS.gene056036.t1 |
| chr1.1 | CDS | 61343839 | 61344000 | 61343839 | ID=cds.MS.gene056036.t1;Parent=MS.gene056036.t1 |
| chr1.1 | exon | 61344087 | 61344192 | 61344087 | ID=MS.gene056036.t1.exon4;Parent=MS.gene056036.t1 |
| chr1.1 | CDS | 61344087 | 61344192 | 61344087 | ID=cds.MS.gene056036.t1;Parent=MS.gene056036.t1 |
| chr1.1 | exon | 61344834 | 61345027 | 61344834 | ID=MS.gene056036.t1.exon5;Parent=MS.gene056036.t1 |
| chr1.1 | CDS | 61344834 | 61345027 | 61344834 | ID=cds.MS.gene056036.t1;Parent=MS.gene056036.t1 |
| chr1.1 | exon | 61345795 | 61345898 | 61345795 | ID=MS.gene056036.t1.exon6;Parent=MS.gene056036.t1 |
| chr1.1 | CDS | 61345795 | 61345898 | 61345795 | ID=cds.MS.gene056036.t1;Parent=MS.gene056036.t1 |
| chr1.1 | exon | 61345976 | 61346159 | 61345976 | ID=MS.gene056036.t1.exon7;Parent=MS.gene056036.t1 |
| chr1.1 | CDS | 61345976 | 61346159 | 61345976 | ID=cds.MS.gene056036.t1;Parent=MS.gene056036.t1 |
| chr1.1 | exon | 61346541 | 61346720 | 61346541 | ID=MS.gene056036.t1.exon8;Parent=MS.gene056036.t1 |
| chr1.1 | CDS | 61346541 | 61346720 | 61346541 | ID=cds.MS.gene056036.t1;Parent=MS.gene056036.t1 |
| chr1.1 | exon | 61347564 | 61347773 | 61347564 | ID=MS.gene056036.t1.exon9;Parent=MS.gene056036.t1 |
| chr1.1 | CDS | 61347564 | 61347773 | 61347564 | ID=cds.MS.gene056036.t1;Parent=MS.gene056036.t1 |
| Gene Sequence |
| Protein sequence |
