Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene028458.t1 | RHN62690.1 | 96.9 | 508 | 10 | 1 | 1 | 508 | 34 | 535 | 5.50E-277 | 963 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene028458.t1 | P47924 | 81.2 | 462 | 83 | 2 | 31 | 488 | 68 | 529 | 9.4e-217 | 754.2 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene028458.t1 | A0A396IAS6 | 96.9 | 508 | 10 | 1 | 1 | 508 | 34 | 535 | 4.0e-277 | 963.0 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene028458 | MS.gene31184 | PPI |
MS.gene028458 | MS.gene31178 | PPI |
MS.gene30927 | MS.gene028458 | PPI |
MS.gene30932 | MS.gene028458 | PPI |
MS.gene071560 | MS.gene028458 | PPI |
MS.gene028619 | MS.gene028458 | PPI |
MS.gene45469 | MS.gene028458 | PPI |
MS.gene028458 | MS.gene028610 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene028458.t1 | MTR_4g094130 | 96.654 | 508 | 11 | 1 | 1 | 508 | 34 | 535 | 0.0 | 997 |
MS.gene028458.t1 | MTR_4g094130 | 98.280 | 407 | 7 | 0 | 102 | 508 | 1 | 407 | 0.0 | 821 |
MS.gene028458.t1 | MTR_2g009270 | 76.413 | 513 | 108 | 3 | 7 | 507 | 29 | 540 | 0.0 | 803 |
MS.gene028458.t1 | MTR_2g096330 | 61.926 | 457 | 152 | 4 | 37 | 485 | 62 | 504 | 0.0 | 575 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene028458.t1 | AT5G64300 | 77.154 | 499 | 96 | 4 | 9 | 489 | 32 | 530 | 0.0 | 783 |
MS.gene028458.t1 | AT2G22450 | 71.429 | 420 | 110 | 4 | 45 | 463 | 64 | 474 | 0.0 | 610 |
MS.gene028458.t1 | AT5G59750 | 59.149 | 470 | 187 | 2 | 20 | 484 | 30 | 499 | 0.0 | 573 |
MS.gene028458.t1 | AT5G59750 | 55.159 | 504 | 187 | 3 | 20 | 484 | 30 | 533 | 0.0 | 557 |
MS.gene028458.t1 | AT5G59750 | 57.767 | 412 | 169 | 2 | 20 | 426 | 30 | 441 | 2.81e-168 | 483 |
Find 144 sgRNAs with CRISPR-Local
Find 344 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ACCTGTGGTGGTACCATATT+TGG | 0.201373 | 4.1:-19807597 | None:intergenic |
TATCTATTGCTGACTTAATA+AGG | 0.228563 | 4.1:+19807894 | MS.gene028458:CDS |
GGTTATGGTTTGTCCATTTC+AGG | 0.231937 | 4.1:+19810718 | MS.gene028458:CDS |
GTTGATCTTGCAGTACTTGC+TGG | 0.298152 | 4.1:+19807767 | MS.gene028458:CDS |
TGTCTCACAGGAGACATATT+TGG | 0.327946 | 4.1:+19810204 | MS.gene028458:CDS |
GAGATTAGAGCTTCCTTTGA+TGG | 0.335212 | 4.1:+19807117 | MS.gene028458:CDS |
CATTCACAGCTAACTGTTAT+AGG | 0.336467 | 4.1:+19808903 | MS.gene028458:CDS |
GGATAGGGCAACCACAGTTT+TGG | 0.339372 | 4.1:+19807631 | MS.gene028458:CDS |
CAATGCGATCCTACCTGAAA+TGG | 0.359168 | 4.1:-19810731 | None:intergenic |
ACTGGAATCATCAATATTAC+TGG | 0.361001 | 4.1:-19810857 | None:intergenic |
TCTTGCAGTACTTGCTGGTT+TGG | 0.375590 | 4.1:+19807772 | MS.gene028458:CDS |
TATGTTGGGCTCAAAGGTTA+TGG | 0.393304 | 4.1:+19810703 | MS.gene028458:CDS |
CCTGTTGACTCAAGGGAGTA+TGG | 0.400777 | 4.1:+19810417 | MS.gene028458:CDS |
GGACATGAAGGAAGGGGTAT+TGG | 0.405006 | 4.1:+19810315 | MS.gene028458:CDS |
GTGACCCATCTTCACACGTT+TGG | 0.413549 | 4.1:-19810794 | None:intergenic |
TTATTTAACAGGGTGACATT+GGG | 0.414280 | 4.1:+19810145 | MS.gene028458:intron |
ATTGGTCTGGCAGGTATAGA+AGG | 0.425872 | 4.1:+19808822 | MS.gene028458:intron |
GCTCAGATTTGGCATTTGTT+CGG | 0.426151 | 4.1:+19806588 | MS.gene028458:CDS |
TCCTTTGATGGTCAACAGTC+GGG | 0.426635 | 4.1:+19807129 | MS.gene028458:CDS |
GTTAAAGCTGCGTTGACCTC+TGG | 0.428144 | 4.1:+19806653 | MS.gene028458:CDS |
TTTATTGTGAAGCACGGAAC+TGG | 0.428836 | 4.1:+19807058 | MS.gene028458:CDS |
TCATGTGCGTGGCTCAGATT+TGG | 0.436104 | 4.1:+19806577 | MS.gene028458:CDS |
TGCGGTAGCGCTTGGAACAC+TGG | 0.436511 | 4.1:+19806730 | MS.gene028458:CDS |
GAAGGAAGGGGTATTGGATT+GGG | 0.436773 | 4.1:+19810321 | MS.gene028458:CDS |
CCTGGGCGGTTGAAATCACT+TGG | 0.436809 | 4.1:-19807677 | None:intergenic |
CTTATTTAACAGGGTGACAT+TGG | 0.437054 | 4.1:+19810144 | MS.gene028458:intron |
CAGCTTAATGCGGTAGCGCT+TGG | 0.438853 | 4.1:+19806722 | MS.gene028458:CDS |
TTATGTGCCAGGAGCAGTAC+TGG | 0.441984 | 4.1:-19810875 | None:intergenic |
TCTAATAATGGCAGCACAGT+TGG | 0.442929 | 4.1:+19807015 | MS.gene028458:CDS |
TGAAGGAAGGGGTATTGGAT+TGG | 0.444630 | 4.1:+19810320 | MS.gene028458:CDS |
CAGGTGTGTCGGCTCAGGAT+AGG | 0.455862 | 4.1:+19807615 | MS.gene028458:CDS |
GGAAACCAAACGTGTGAAGA+TGG | 0.457631 | 4.1:+19810789 | MS.gene028458:CDS |
CCATACTCCCTTGAGTCAAC+AGG | 0.462092 | 4.1:-19810417 | None:intergenic |
GCGGTAGCGCTTGGAACACT+GGG | 0.465356 | 4.1:+19806731 | MS.gene028458:CDS |
CACTTATCACAAATGAAAAC+AGG | 0.465466 | 4.1:+19810758 | MS.gene028458:CDS |
GAATTTAACAGCAAATTGAA+TGG | 0.466315 | 4.1:+19810829 | MS.gene028458:CDS |
GGGGCAGATACAGCTCTAAC+AGG | 0.470368 | 4.1:+19806752 | MS.gene028458:CDS |
AGGCAATCCCAACTCCTCAT+TGG | 0.470707 | 4.1:-19810397 | None:intergenic |
GCAAAATATGTTGGGCTCAA+AGG | 0.471659 | 4.1:+19810697 | MS.gene028458:CDS |
AAACGAAGGAGATCTAATAA+TGG | 0.473118 | 4.1:+19807003 | MS.gene028458:CDS |
AACAATCCGGCAAAATATGT+TGG | 0.476857 | 4.1:+19810688 | MS.gene028458:CDS |
AATTGTAATTGCAGATATTG+AGG | 0.477500 | 4.1:+19810632 | MS.gene028458:intron |
TCTGCAAACTGGCGAAGCTT+AGG | 0.478958 | 4.1:-19807851 | None:intergenic |
AGGTGTGTCGGCTCAGGATA+GGG | 0.482470 | 4.1:+19807616 | MS.gene028458:CDS |
CTGAGGCTATTGAAGACATT+CGG | 0.487102 | 4.1:+19806843 | MS.gene028458:CDS |
GTGTGACTGCGGAAATCAAT+TGG | 0.489196 | 4.1:+19810236 | MS.gene028458:CDS |
AAATGAAAACAGGAGATACT+TGG | 0.489544 | 4.1:+19810768 | MS.gene028458:CDS |
CAGATTGAGGCTGCTGGCAG+AGG | 0.491152 | 4.1:+19810273 | MS.gene028458:CDS |
TGTAGAAGCCAATGAGGAGT+TGG | 0.491158 | 4.1:+19810389 | MS.gene028458:CDS |
TGCTTATAACCTACAGGATG+AGG | 0.491407 | 4.1:+19810356 | MS.gene028458:CDS |
AAGGAAGCTCTAATCTCTCC+AGG | 0.494013 | 4.1:-19807111 | None:intergenic |
CACCACAGGTGTGTCGGCTC+AGG | 0.495943 | 4.1:+19807610 | MS.gene028458:CDS |
GTTGGCAACACCTGAGGCTA+TGG | 0.497594 | 4.1:+19807033 | MS.gene028458:CDS |
GCCAAATATGGTACCACCAC+AGG | 0.505213 | 4.1:+19807596 | MS.gene028458:CDS |
ACAATCCGGCAAAATATGTT+GGG | 0.506282 | 4.1:+19810689 | MS.gene028458:CDS |
GACTCAAGGGAGTATGGAAT+TGG | 0.510546 | 4.1:+19810423 | MS.gene028458:CDS |
ATTGTAATTGCAGATATTGA+GGG | 0.510691 | 4.1:+19810633 | MS.gene028458:intron |
TGGGATTGCCTGTTGACTCA+AGG | 0.511648 | 4.1:+19810409 | MS.gene028458:CDS |
GATTCAGACAGTCCAACAAA+AGG | 0.513016 | 4.1:+19806806 | MS.gene028458:CDS |
TTTAGCGGGAAAATATGGCC+TGG | 0.513539 | 4.1:-19807695 | None:intergenic |
TTAGCGGGAAAATATGGCCT+GGG | 0.516577 | 4.1:-19807694 | None:intergenic |
TTCCTTTGATGGTCAACAGT+CGG | 0.517538 | 4.1:+19807128 | MS.gene028458:CDS |
GGTGGTATCTTGAAGAGAGC+TGG | 0.518284 | 4.1:+19807728 | MS.gene028458:CDS |
ATTGCAGATATTGAGGGACT+TGG | 0.519933 | 4.1:+19810639 | MS.gene028458:intron |
GTCTTCAATAGCCTCAGGTA+TGG | 0.520814 | 4.1:-19806837 | None:intergenic |
GGGATTGCCTGTTGACTCAA+GGG | 0.524496 | 4.1:+19810410 | MS.gene028458:CDS |
CTATAACAGTTAGCTGTGAA+TGG | 0.526297 | 4.1:-19808902 | None:intergenic |
TCTTGCAATGCAACAGATTG+AGG | 0.526543 | 4.1:+19810260 | MS.gene028458:CDS |
GTAGAAGCCAATGAGGAGTT+GGG | 0.529410 | 4.1:+19810390 | MS.gene028458:CDS |
TCCCGACTGTTGACCATCAA+AGG | 0.529835 | 4.1:-19807130 | None:intergenic |
TTGATTTCCGCAGTCACACC+TGG | 0.532360 | 4.1:-19810232 | None:intergenic |
GTGAAGATGGGTCACATGTA+TGG | 0.541106 | 4.1:+19810802 | MS.gene028458:CDS |
GGCTGCTGGCAGAGGTGTGT+TGG | 0.543552 | 4.1:+19810281 | MS.gene028458:CDS |
GGAGCATATTGCGATGGTAA+AGG | 0.544393 | 4.1:+19808943 | MS.gene028458:CDS |
AAGCATGAAAGAGGAAGACC+TGG | 0.546167 | 4.1:+19807093 | MS.gene028458:CDS |
CGAATGTCTTCAATAGCCTC+AGG | 0.546934 | 4.1:-19806842 | None:intergenic |
GAAGCTAATGACAAACAATC+CGG | 0.547961 | 4.1:+19810675 | MS.gene028458:CDS |
GCTTCGTGCTTATAACCTAC+AGG | 0.549079 | 4.1:+19810350 | MS.gene028458:CDS |
TGCACTAATACCAACAATGT+GGG | 0.551549 | 4.1:+19808877 | MS.gene028458:CDS |
GATGATTCCAGTACTGCTCC+TGG | 0.554163 | 4.1:+19810868 | MS.gene028458:CDS |
GAAACCAAACGTGTGAAGAT+GGG | 0.558278 | 4.1:+19810790 | MS.gene028458:CDS |
ATGGTTTGTCCATTTCAGGT+AGG | 0.561182 | 4.1:+19810722 | MS.gene028458:CDS |
ACAATAAAAGCCATAGCCTC+AGG | 0.561239 | 4.1:-19807043 | None:intergenic |
TCTTCGAGGACATGAAGGAA+GGG | 0.561452 | 4.1:+19810308 | MS.gene028458:CDS |
ATGGATGTGATGTTCTTGTG+AGG | 0.562152 | 4.1:+19810169 | MS.gene028458:CDS |
ATTAGTACTTCAGATGGTAG+TGG | 0.563625 | 4.1:+19806958 | MS.gene028458:intron |
ATGCAACAGATTGAGGCTGC+TGG | 0.565430 | 4.1:+19810267 | MS.gene028458:CDS |
GAGACATATTTGGATCTGCC+AGG | 0.566429 | 4.1:+19810214 | MS.gene028458:CDS |
CCAAGTGATTTCAACCGCCC+AGG | 0.570750 | 4.1:+19807677 | MS.gene028458:CDS |
GGAGTATGGAATTGGTGCAC+AGG | 0.571226 | 4.1:+19810431 | MS.gene028458:CDS |
TAACAGGGTGACATTGGGGA+TGG | 0.572072 | 4.1:+19810150 | MS.gene028458:intron |
TTGCAGATATTGAGGGACTT+GGG | 0.572398 | 4.1:+19810640 | MS.gene028458:intron |
GCACTAATACCAACAATGTG+GGG | 0.575469 | 4.1:+19808878 | MS.gene028458:CDS |
AGTTTGTATAAGCATGAAAG+AGG | 0.575891 | 4.1:+19807084 | MS.gene028458:CDS |
GGTTATAAGCACGAAGCTTG+TGG | 0.577439 | 4.1:-19810344 | None:intergenic |
ATCTTCGAGGACATGAAGGA+AGG | 0.578424 | 4.1:+19810307 | MS.gene028458:CDS |
GCTGCGTTGACCTCTGGAGG+AGG | 0.578530 | 4.1:+19806659 | MS.gene028458:CDS |
GATGGGTCACATGTATGGCT+TGG | 0.579447 | 4.1:+19810807 | MS.gene028458:CDS |
CATACCGCATTGCGACATGA+AGG | 0.581456 | 4.1:-19806626 | None:intergenic |
ACCTCACACAGAACTGCCAC+AGG | 0.581651 | 4.1:-19807797 | None:intergenic |
TACAGCATTCACTGTGACAG+TGG | 0.582981 | 4.1:+19807171 | MS.gene028458:CDS |
TGTGAGGTTGTAGATGATGA+TGG | 0.585772 | 4.1:+19807812 | MS.gene028458:CDS |
CTTCGAGGACATGAAGGAAG+GGG | 0.588755 | 4.1:+19810309 | MS.gene028458:CDS |
AAAGCTGCGTTGACCTCTGG+AGG | 0.591046 | 4.1:+19806656 | MS.gene028458:CDS |
CTGTCACAGTGAATGCTGTA+CGG | 0.591136 | 4.1:-19807168 | None:intergenic |
ACTTGCTGGTTTGGATCCTG+TGG | 0.591421 | 4.1:+19807781 | MS.gene028458:CDS |
TAACCTACAGGATGAGGGAA+GGG | 0.594297 | 4.1:+19810362 | MS.gene028458:CDS |
GATACAGCTCTAACAGGCAG+TGG | 0.594402 | 4.1:+19806758 | MS.gene028458:CDS |
GGTGTGTTGGTATATCTTCG+AGG | 0.595300 | 4.1:+19810294 | MS.gene028458:CDS |
GATAAACTAGTGGAACGTGC+TGG | 0.595479 | 4.1:+19808851 | MS.gene028458:CDS |
AAGGAAGAGAGATAAACTAG+TGG | 0.595527 | 4.1:+19808841 | MS.gene028458:CDS |
GCTATTGAAGACATTCGGAA+TGG | 0.596453 | 4.1:+19806848 | MS.gene028458:CDS |
TGAAGACATTCGGAATGGAA+AGG | 0.600427 | 4.1:+19806853 | MS.gene028458:CDS |
GCTTATAACCTACAGGATGA+GGG | 0.601860 | 4.1:+19810357 | MS.gene028458:CDS |
TATTTAACAGGGTGACATTG+GGG | 0.607649 | 4.1:+19810146 | MS.gene028458:intron |
TATCCCTTCCCTCATCCTGT+AGG | 0.610379 | 4.1:-19810365 | None:intergenic |
GTACACTCAGAGTGTCTCAC+AGG | 0.612117 | 4.1:+19810192 | MS.gene028458:CDS |
ATCCTGAGCCGACACACCTG+TGG | 0.612282 | 4.1:-19807612 | None:intergenic |
GTATATCTTCGAGGACATGA+AGG | 0.613709 | 4.1:+19810303 | MS.gene028458:CDS |
ATACCGCATTGCGACATGAA+GGG | 0.616657 | 4.1:-19806625 | None:intergenic |
TCCTGTGGCAGTTCTGTGTG+AGG | 0.618636 | 4.1:+19807796 | MS.gene028458:CDS |
CTGCACTAATACCAACAATG+TGG | 0.619531 | 4.1:+19808876 | MS.gene028458:CDS |
AAGCTTAGGTAATCTAGCCA+TGG | 0.622161 | 4.1:-19807837 | None:intergenic |
ATAACCTACAGGATGAGGGA+AGG | 0.623311 | 4.1:+19810361 | MS.gene028458:CDS |
TGGATGTGATGTTCTTGTGA+GGG | 0.626484 | 4.1:+19810170 | MS.gene028458:CDS |
TTCCCGCTAAAATACAGGGA+AGG | 0.631313 | 4.1:+19807707 | MS.gene028458:CDS |
TGGTACCACCACAGGTGTGT+CGG | 0.632234 | 4.1:+19807604 | MS.gene028458:CDS |
TGTAGATGATGATGGTTCCA+TGG | 0.633135 | 4.1:+19807820 | MS.gene028458:CDS |
CCGCTAAAATACAGGGAAGG+TGG | 0.634097 | 4.1:+19807710 | MS.gene028458:CDS |
CCGTCTATGATTCATGTGCG+TGG | 0.635896 | 4.1:+19806566 | None:intergenic |
CTGAGCCGACACACCTGTGG+TGG | 0.636032 | 4.1:-19807609 | None:intergenic |
AGCACAGTTGGCAACACCTG+AGG | 0.640668 | 4.1:+19807027 | MS.gene028458:CDS |
CACTAATACCAACAATGTGG+GGG | 0.642333 | 4.1:+19808879 | MS.gene028458:CDS |
TGGGATGGAGCATATTGCGA+TGG | 0.648423 | 4.1:+19808937 | MS.gene028458:CDS |
GACGAGGACAGAGAAAACGA+AGG | 0.678938 | 4.1:+19806989 | MS.gene028458:CDS |
GGATACTGTAGAAGCCAATG+AGG | 0.679133 | 4.1:+19810383 | MS.gene028458:CDS |
GCGGGAAAATATGGCCTGGG+CGG | 0.682425 | 4.1:-19807691 | None:intergenic |
GGTAGTGGTTGTAGATGACG+AGG | 0.685375 | 4.1:+19806973 | MS.gene028458:CDS |
TGAATCAGCACAGCTTAATG+CGG | 0.689935 | 4.1:+19806712 | MS.gene028458:CDS |
GGATGCAAGGGCCAAAACTG+TGG | 0.696804 | 4.1:-19807642 | None:intergenic |
CGGTAGCGCTTGGAACACTG+GGG | 0.714496 | 4.1:+19806732 | MS.gene028458:CDS |
GGATCTGCCAGGTGTGACTG+CGG | 0.722494 | 4.1:+19810225 | MS.gene028458:CDS |
ATTCCCTTCATGTCGCAATG+CGG | 0.734754 | 4.1:+19806622 | MS.gene028458:CDS |
GGTAGCGCTTGGAACACTGG+GGG | 0.737992 | 4.1:+19806733 | MS.gene028458:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | CAATATATGATTAAAAAAAA+AGG | - | chr4.1:19809169-19809188 | None:intergenic | 10.0% |
!! | TTTAATAAAATATAACTTTG+TGG | + | chr4.1:19807519-19807538 | MS.gene028458:intron | 10.0% |
!! | AAAAAAAACTAAAGAAAGTA+TGG | - | chr4.1:19809276-19809295 | None:intergenic | 15.0% |
!! | TCTATATTGAACTATATATA+TGG | + | chr4.1:19808980-19808999 | MS.gene028458:intron | 15.0% |
!!! | ATTCATTTTGAAAAAATTCA+GGG | - | chr4.1:19809694-19809713 | None:intergenic | 15.0% |
!!! | TAACTTTGATTTTAACTAAA+TGG | + | chr4.1:19809034-19809053 | MS.gene028458:intron | 15.0% |
!!! | TATTCATTTTGAAAAAATTC+AGG | - | chr4.1:19809695-19809714 | None:intergenic | 15.0% |
!!! | TCTCTTTATTTGTATATAAA+GGG | + | chr4.1:19808082-19808101 | MS.gene028458:intron | 15.0% |
!!! | TTCTCTTTATTTGTATATAA+AGG | + | chr4.1:19808081-19808100 | MS.gene028458:intron | 15.0% |
!! | AAAATGAATAGAGAAGAAAA+AGG | + | chr4.1:19809705-19809724 | MS.gene028458:intron | 20.0% |
!! | AACTAGAAATTCAATCAATT+TGG | + | chr4.1:19808457-19808476 | MS.gene028458:intron | 20.0% |
!! | AATGCAAAAATGTTGAAAAA+AGG | - | chr4.1:19809991-19810010 | None:intergenic | 20.0% |
!! | ATATAAAGACAAAATAACCA+CGG | - | chr4.1:19808701-19808720 | None:intergenic | 20.0% |
!! | ATGCAAAAATGTTGAAAAAA+GGG | - | chr4.1:19809990-19810009 | None:intergenic | 20.0% |
!!! | AATTTTTGAAAGACAAATCA+CGG | - | chr4.1:19808427-19808446 | None:intergenic | 20.0% |
!!! | ATTTTACTGTATTCAATTCA+TGG | + | chr4.1:19810508-19810527 | MS.gene028458:intron | 20.0% |
!!! | GGTATTCTATATAAAAGTTT+TGG | + | chr4.1:19806897-19806916 | MS.gene028458:intron | 20.0% |
!!! | TAGGATTTCAATTTTTGTAA+TGG | - | chr4.1:19808601-19808620 | None:intergenic | 20.0% |
! | AAAAATTTAACTGCGCTTAA+AGG | - | chr4.1:19808678-19808697 | None:intergenic | 25.0% |
! | AAAAGAAACAAAAAGAATCC+AGG | - | chr4.1:19808773-19808792 | None:intergenic | 25.0% |
! | AAATAATAAAAAGCTCACGA+GGG | + | chr4.1:19808043-19808062 | MS.gene028458:intron | 25.0% |
! | AAATTAGCTAAAGATGAATC+AGG | - | chr4.1:19808745-19808764 | None:intergenic | 25.0% |
! | AATTGTAATTGCAGATATTG+AGG | + | chr4.1:19810632-19810651 | MS.gene028458:intron | 25.0% |
! | ACAACAAAAATTGCATACAA+TGG | - | chr4.1:19808338-19808357 | None:intergenic | 25.0% |
! | AGATGACAATTAAGGAAAAT+AGG | - | chr4.1:19808257-19808276 | None:intergenic | 25.0% |
! | ATTGAAAGGTTCAAGATAAT+TGG | - | chr4.1:19810062-19810081 | None:intergenic | 25.0% |
! | ATTGTAATTGCAGATATTGA+GGG | + | chr4.1:19810633-19810652 | MS.gene028458:intron | 25.0% |
! | GAAGAAATAGATGACAATTA+AGG | - | chr4.1:19808265-19808284 | None:intergenic | 25.0% |
! | GAATTTAACAGCAAATTGAA+TGG | + | chr4.1:19810829-19810848 | MS.gene028458:CDS | 25.0% |
! | GATGACAATTAAGGAAAATA+GGG | - | chr4.1:19808256-19808275 | None:intergenic | 25.0% |
! | GTACTAATGTCAGTTAATAA+CGG | - | chr4.1:19806946-19806965 | None:intergenic | 25.0% |
! | TAAATAATAAAAAGCTCACG+AGG | + | chr4.1:19808042-19808061 | MS.gene028458:intron | 25.0% |
! | TAATGGAAGATAAACAAGAT+AGG | - | chr4.1:19808620-19808639 | None:intergenic | 25.0% |
! | TACATGATTATTAAGTTCAC+TGG | + | chr4.1:19810536-19810555 | MS.gene028458:intron | 25.0% |
! | TATTAGCAAGTTTCTCATTA+GGG | + | chr4.1:19808018-19808037 | MS.gene028458:intron | 25.0% |
! | TCATCAAACAAGTTATGTAT+TGG | - | chr4.1:19809390-19809409 | None:intergenic | 25.0% |
! | TGCAAAAATGTTGAAAAAAG+GGG | - | chr4.1:19809989-19810008 | None:intergenic | 25.0% |
! | TTATTAGCAAGTTTCTCATT+AGG | + | chr4.1:19808017-19808036 | MS.gene028458:intron | 25.0% |
!! | AACATAGAACTAGATGTTTT+AGG | + | chr4.1:19810576-19810595 | MS.gene028458:intron | 25.0% |
!! | AATTCTCATTGACTGAAATT+GGG | + | chr4.1:19809883-19809902 | MS.gene028458:intron | 25.0% |
!! | ACTTATCAATGCAATTTTGT+AGG | + | chr4.1:19807571-19807590 | MS.gene028458:intron | 25.0% |
!! | GTAAGTAGTTCGATATTTTA+AGG | - | chr4.1:19809484-19809503 | None:intergenic | 25.0% |
!! | TGGACATTTCTTATTTAACA+GGG | + | chr4.1:19810135-19810154 | MS.gene028458:intron | 25.0% |
!! | TTGGACATTTCTTATTTAAC+AGG | + | chr4.1:19810134-19810153 | MS.gene028458:intron | 25.0% |
!! | TTTCAACATTTTTGCATTCA+AGG | + | chr4.1:19809993-19810012 | MS.gene028458:intron | 25.0% |
!!! | AGGGTTTTTAAGTAATTAGT+AGG | + | chr4.1:19807972-19807991 | MS.gene028458:intron | 25.0% |
!!! | ATTTATTTTTTTGACAGCCA+CGG | - | chr4.1:19809214-19809233 | None:intergenic | 25.0% |
!!! | GATTCTTTTTGTTTCTTTTC+TGG | + | chr4.1:19808774-19808793 | MS.gene028458:intron | 25.0% |
!!! | GTTTTTAAGTAATTAGTAGG+TGG | + | chr4.1:19807975-19807994 | MS.gene028458:intron | 25.0% |
!!! | TATCTATTGCTGACTTAATA+AGG | + | chr4.1:19807894-19807913 | MS.gene028458:CDS | 25.0% |
!!! | TCAATCAATTTGGTTTTTTG+TGG | + | chr4.1:19808467-19808486 | MS.gene028458:intron | 25.0% |
!!! | TGTTTTAGATGATGTAAGAA+TGG | - | chr4.1:19807265-19807284 | None:intergenic | 25.0% |
!!! | TTGTATGCAATTTTTGTTGT+CGG | + | chr4.1:19808338-19808357 | MS.gene028458:intron | 25.0% |
AAACGAAGGAGATCTAATAA+TGG | + | chr4.1:19807003-19807022 | MS.gene028458:CDS | 30.0% | |
AAACTGATCTTGTCAGTTAA+AGG | - | chr4.1:19809928-19809947 | None:intergenic | 30.0% | |
AAATGAAAACAGGAGATACT+TGG | + | chr4.1:19810768-19810787 | MS.gene028458:CDS | 30.0% | |
ACTGGAATCATCAATATTAC+TGG | - | chr4.1:19810860-19810879 | None:intergenic | 30.0% | |
ACTTAAAAACCCTCTCATAT+TGG | - | chr4.1:19807965-19807984 | None:intergenic | 30.0% | |
AGACCTAAAAAATGAAGATC+TGG | + | chr4.1:19806682-19806701 | MS.gene028458:CDS | 30.0% | |
AGGTAAGGAACAAAAAATAG+AGG | - | chr4.1:19808725-19808744 | None:intergenic | 30.0% | |
AGTAAATGTCTGTTACATAC+TGG | - | chr4.1:19807421-19807440 | None:intergenic | 30.0% | |
AGTAATGACAATAGTAGTAG+AGG | - | chr4.1:19808221-19808240 | None:intergenic | 30.0% | |
AGTTTGTATAAGCATGAAAG+AGG | + | chr4.1:19807084-19807103 | MS.gene028458:CDS | 30.0% | |
ATAAAAATTGAGTCACATCG+AGG | + | chr4.1:19809240-19809259 | MS.gene028458:intron | 30.0% | |
ATCATATTGCTCTACCATAT+TGG | - | chr4.1:19809082-19809101 | None:intergenic | 30.0% | |
CACTTATCACAAATGAAAAC+AGG | + | chr4.1:19810758-19810777 | MS.gene028458:CDS | 30.0% | |
CTAAAAAATGAAGATCTGGT+TGG | + | chr4.1:19806686-19806705 | MS.gene028458:CDS | 30.0% | |
CTTAAAAACCCTCTCATATT+GGG | - | chr4.1:19807964-19807983 | None:intergenic | 30.0% | |
GATCTAGTCATCTTTCTATT+TGG | + | chr4.1:19809841-19809860 | MS.gene028458:intron | 30.0% | |
GTAAATGTCTGTTACATACT+GGG | - | chr4.1:19807420-19807439 | None:intergenic | 30.0% | |
GTAATGACAATAGTAGTAGA+GGG | - | chr4.1:19808220-19808239 | None:intergenic | 30.0% | |
TAGCTTCTATTCCAAATGTA+GGG | - | chr4.1:19809416-19809435 | None:intergenic | 30.0% | |
TTAGCTTCTATTCCAAATGT+AGG | - | chr4.1:19809417-19809436 | None:intergenic | 30.0% | |
TTATTTAACAGGGTGACATT+GGG | + | chr4.1:19810145-19810164 | MS.gene028458:intron | 30.0% | |
! | ATATTTTCCCGCTAAAATAC+AGG | + | chr4.1:19807702-19807721 | MS.gene028458:CDS | 30.0% |
! | ATTTTGTAGGATGCCAAATA+TGG | + | chr4.1:19807584-19807603 | MS.gene028458:intron | 30.0% |
! | CTTTAGCTAATTTTTCTTCC+TGG | + | chr4.1:19808752-19808771 | MS.gene028458:intron | 30.0% |
! | GAATTCTCATTGACTGAAAT+TGG | + | chr4.1:19809882-19809901 | MS.gene028458:intron | 30.0% |
! | GTTAATAACGGAAATCTAAG+TGG | - | chr4.1:19806934-19806953 | None:intergenic | 30.0% |
! | TATTTTCCCGCTAAAATACA+GGG | + | chr4.1:19807703-19807722 | MS.gene028458:CDS | 30.0% |
! | TTTTGAATCTTTGGATGCAA+GGG | - | chr4.1:19807657-19807676 | None:intergenic | 30.0% |
!! | AGAATTTCAAGTTAACTCAC+GGG | - | chr4.1:19809573-19809592 | None:intergenic | 30.0% |
!! | CAGAATTTCAAGTTAACTCA+CGG | - | chr4.1:19809574-19809593 | None:intergenic | 30.0% |
!! | TGATAGCAACCTCTAAAATT+AGG | - | chr4.1:19808501-19808520 | None:intergenic | 30.0% |
!!! | ATCACTTGGTTTTGAATCTT+TGG | - | chr4.1:19807666-19807685 | None:intergenic | 30.0% |
!!! | CAACCAGATCTTCATTTTTT+AGG | - | chr4.1:19806688-19806707 | None:intergenic | 30.0% |
!!! | GTTATAGGTCACTTTTAGAT+GGG | + | chr4.1:19808918-19808937 | MS.gene028458:CDS | 30.0% |
!!! | TGTATTTTAGCGGGAAAATA+TGG | - | chr4.1:19807703-19807722 | None:intergenic | 30.0% |
!!! | TGTTATAGGTCACTTTTAGA+TGG | + | chr4.1:19808917-19808936 | MS.gene028458:CDS | 30.0% |
AACAATCCGGCAAAATATGT+TGG | + | chr4.1:19810688-19810707 | MS.gene028458:CDS | 35.0% | |
AAGACTTCACTCAATCTTGT+GGG | - | chr4.1:19809808-19809827 | None:intergenic | 35.0% | |
AAGCTAAGCTATTGGCATAA+AGG | + | chr4.1:19809430-19809449 | MS.gene028458:intron | 35.0% | |
AAGGAAGAGAGATAAACTAG+TGG | + | chr4.1:19808841-19808860 | MS.gene028458:CDS | 35.0% | |
AATTAGTAGGTGGCTAAGTA+GGG | + | chr4.1:19807985-19808004 | MS.gene028458:intron | 35.0% | |
ACAATCCGGCAAAATATGTT+GGG | + | chr4.1:19810689-19810708 | MS.gene028458:CDS | 35.0% | |
ACACAAAGTTTACCTCTTAG+TGG | - | chr4.1:19809767-19809786 | None:intergenic | 35.0% | |
ACTGACATTAGTACTTCAGA+TGG | + | chr4.1:19806952-19806971 | MS.gene028458:intron | 35.0% | |
AGCTAAAGATGAATCAGGTA+AGG | - | chr4.1:19808740-19808759 | None:intergenic | 35.0% | |
AGTCCCAAAAAATCTCAGAT+AGG | + | chr4.1:19809532-19809551 | MS.gene028458:intron | 35.0% | |
ATTAGTACTTCAGATGGTAG+TGG | + | chr4.1:19806958-19806977 | MS.gene028458:intron | 35.0% | |
ATTATTATTACACCCTCAGC+AGG | - | chr4.1:19809308-19809327 | None:intergenic | 35.0% | |
ATTTACTCACCTTCATGTGA+TGG | + | chr4.1:19807287-19807306 | MS.gene028458:intron | 35.0% | |
CATTCACAGCTAACTGTTAT+AGG | + | chr4.1:19808903-19808922 | MS.gene028458:CDS | 35.0% | |
CTATAACAGTTAGCTGTGAA+TGG | - | chr4.1:19808905-19808924 | None:intergenic | 35.0% | |
CTTATTTAACAGGGTGACAT+TGG | + | chr4.1:19810144-19810163 | MS.gene028458:intron | 35.0% | |
GAAATGTCCAACCATAACAA+AGG | - | chr4.1:19810125-19810144 | None:intergenic | 35.0% | |
GAAGCTAATGACAAACAATC+CGG | + | chr4.1:19810675-19810694 | MS.gene028458:CDS | 35.0% | |
GAGGTAAACTTTGTGTGTTT+AGG | + | chr4.1:19809771-19809790 | MS.gene028458:intron | 35.0% | |
GCATAAGAGAGATACCAATA+TGG | + | chr4.1:19809065-19809084 | MS.gene028458:intron | 35.0% | |
GTAAAAAGAACCTTGATCCA+GGG | + | chr4.1:19809727-19809746 | MS.gene028458:intron | 35.0% | |
GTCCCAAAAAATCTCAGATA+GGG | + | chr4.1:19809533-19809552 | MS.gene028458:intron | 35.0% | |
GTTCTGATCCACAAATACTT+TGG | + | chr4.1:19809620-19809639 | MS.gene028458:intron | 35.0% | |
TAAAGTTGACCATCACATGA+AGG | - | chr4.1:19807299-19807318 | None:intergenic | 35.0% | |
TAATTAGTAGGTGGCTAAGT+AGG | + | chr4.1:19807984-19808003 | MS.gene028458:intron | 35.0% | |
TATTTAACAGGGTGACATTG+GGG | + | chr4.1:19810146-19810165 | MS.gene028458:intron | 35.0% | |
TCAATGAGAATTCCATTCCT+GGG | - | chr4.1:19809875-19809894 | None:intergenic | 35.0% | |
TCATGTGATGGTCAACTTTA+GGG | + | chr4.1:19807299-19807318 | MS.gene028458:intron | 35.0% | |
TCCCAAAAAATCTCAGATAG+GGG | + | chr4.1:19809534-19809553 | MS.gene028458:intron | 35.0% | |
TGACAGTGGTATGTACAATT+TGG | + | chr4.1:19807185-19807204 | MS.gene028458:intron | 35.0% | |
TGCACTAATACCAACAATGT+GGG | + | chr4.1:19808877-19808896 | MS.gene028458:CDS | 35.0% | |
TGCGAAATACGTTGTATGTT+AGG | + | chr4.1:19807937-19807956 | MS.gene028458:intron | 35.0% | |
TGGAATAGAAGCTAAGCTAT+TGG | + | chr4.1:19809422-19809441 | MS.gene028458:intron | 35.0% | |
TGTTTAATAACTGCAGTGCA+AGG | - | chr4.1:19808647-19808666 | None:intergenic | 35.0% | |
TTCATGTGATGGTCAACTTT+AGG | + | chr4.1:19807298-19807317 | MS.gene028458:intron | 35.0% | |
TTTGATGAAGTCCCTACATT+TGG | + | chr4.1:19809402-19809421 | MS.gene028458:intron | 35.0% | |
! | AATAACGGAAATCTAAGTGG+AGG | - | chr4.1:19806931-19806950 | None:intergenic | 35.0% |
! | ATGGAAGCAAAACCTTTTGT+TGG | - | chr4.1:19806821-19806840 | None:intergenic | 35.0% |
! | ATGGCTTTTATTGTGAAGCA+CGG | + | chr4.1:19807052-19807071 | MS.gene028458:CDS | 35.0% |
! | TGACGGAATATGTTTCTGTT+AGG | + | chr4.1:19808127-19808146 | MS.gene028458:intron | 35.0% |
! | TGTTGAAGCCAAAGTATTTG+TGG | - | chr4.1:19809631-19809650 | None:intergenic | 35.0% |
!! | AACTAGATGTTTTAGGCAGT+TGG | + | chr4.1:19810583-19810602 | MS.gene028458:intron | 35.0% |
!! | GTTTTGAATCTTTGGATGCA+AGG | - | chr4.1:19807658-19807677 | None:intergenic | 35.0% |
!! | TGTTACTGTTGGTTTATTGC+AGG | + | chr4.1:19808297-19808316 | MS.gene028458:intron | 35.0% |
!!! | ATTTTAAGGTGCCAATCCTA+GGG | - | chr4.1:19809470-19809489 | None:intergenic | 35.0% |
!!! | TATTTTAAGGTGCCAATCCT+AGG | - | chr4.1:19809471-19809490 | None:intergenic | 35.0% |
AAGCTTAGGTAATCTAGCCA+TGG | - | chr4.1:19807840-19807859 | None:intergenic | 40.0% | |
ACAATAAAAGCCATAGCCTC+AGG | - | chr4.1:19807046-19807065 | None:intergenic | 40.0% | |
AGAAAGATGACTAGATCCCT+GGG | - | chr4.1:19809838-19809857 | None:intergenic | 40.0% | |
AGCCTGCAGGATTTGAAAAT+CGG | + | chr4.1:19810027-19810046 | MS.gene028458:intron | 40.0% | |
ATGACATACTTCCCTAGGAT+TGG | + | chr4.1:19809456-19809475 | MS.gene028458:intron | 40.0% | |
ATGATATAGAATGCCTGAGC+AGG | + | chr4.1:19809657-19809676 | MS.gene028458:intron | 40.0% | |
ATGGATGTGATGTTCTTGTG+AGG | + | chr4.1:19810169-19810188 | MS.gene028458:CDS | 40.0% | |
ATGTTAGGACCCAATATGAG+AGG | + | chr4.1:19807952-19807971 | MS.gene028458:intron | 40.0% | |
ATTGCAGATATTGAGGGACT+TGG | + | chr4.1:19810639-19810658 | MS.gene028458:intron | 40.0% | |
CAAGACTTCACTCAATCTTG+TGG | - | chr4.1:19809809-19809828 | None:intergenic | 40.0% | |
CACAAATAGGATCCACTAAG+AGG | + | chr4.1:19809752-19809771 | MS.gene028458:intron | 40.0% | |
CACAAGATTGAGTGAAGTCT+TGG | + | chr4.1:19809807-19809826 | MS.gene028458:intron | 40.0% | |
CACTAATACCAACAATGTGG+GGG | + | chr4.1:19808879-19808898 | MS.gene028458:CDS | 40.0% | |
CATACAATGGTAGAACCCAA+TGG | - | chr4.1:19808325-19808344 | None:intergenic | 40.0% | |
CTCTCTGGACTTCAAGAATT+GGG | - | chr4.1:19809348-19809367 | None:intergenic | 40.0% | |
CTGAGGCTATTGAAGACATT+CGG | + | chr4.1:19806843-19806862 | MS.gene028458:CDS | 40.0% | |
CTGCACTAATACCAACAATG+TGG | + | chr4.1:19808876-19808895 | MS.gene028458:CDS | 40.0% | |
CTTGTGAGTTGTAGGTTTGA+CGG | + | chr4.1:19808110-19808129 | MS.gene028458:intron | 40.0% | |
GAAACCAAACGTGTGAAGAT+GGG | + | chr4.1:19810790-19810809 | MS.gene028458:CDS | 40.0% | |
GAGATTAACACCTATTGGTC+TGG | + | chr4.1:19808809-19808828 | MS.gene028458:intron | 40.0% | |
GAGATTAGAGCTTCCTTTGA+TGG | + | chr4.1:19807117-19807136 | MS.gene028458:CDS | 40.0% | |
GATTCAGACAGTCCAACAAA+AGG | + | chr4.1:19806806-19806825 | MS.gene028458:CDS | 40.0% | |
GCAAAATATGTTGGGCTCAA+AGG | + | chr4.1:19810697-19810716 | MS.gene028458:CDS | 40.0% | |
GCACTAATACCAACAATGTG+GGG | + | chr4.1:19808878-19808897 | MS.gene028458:CDS | 40.0% | |
GCAGTTGGATTCACTCATAA+TGG | + | chr4.1:19810598-19810617 | MS.gene028458:intron | 40.0% | |
GCTATTGAAGACATTCGGAA+TGG | + | chr4.1:19806848-19806867 | MS.gene028458:CDS | 40.0% | |
GCTCAGATTTGGCATTTGTT+CGG | + | chr4.1:19806588-19806607 | MS.gene028458:CDS | 40.0% | |
GCTTATAACCTACAGGATGA+GGG | + | chr4.1:19810357-19810376 | MS.gene028458:CDS | 40.0% | |
GGAAAATGACATACTTCCCT+AGG | + | chr4.1:19809451-19809470 | MS.gene028458:intron | 40.0% | |
GGGAAATTCTTGTGAGTTGT+AGG | + | chr4.1:19808102-19808121 | MS.gene028458:intron | 40.0% | |
GGTAAAAAGAACCTTGATCC+AGG | + | chr4.1:19809726-19809745 | MS.gene028458:intron | 40.0% | |
GGTTTATTGCAGGATCCATT+GGG | + | chr4.1:19808307-19808326 | MS.gene028458:intron | 40.0% | |
GTATATCTTCGAGGACATGA+AGG | + | chr4.1:19810303-19810322 | MS.gene028458:CDS | 40.0% | |
GTCAATGAGAATTCCATTCC+TGG | - | chr4.1:19809876-19809895 | None:intergenic | 40.0% | |
TAGAAAGATGACTAGATCCC+TGG | - | chr4.1:19809839-19809858 | None:intergenic | 40.0% | |
TAGGTGTTAATCTCCTCGAT+AGG | - | chr4.1:19808803-19808822 | None:intergenic | 40.0% | |
TATGTTGGGCTCAAAGGTTA+TGG | + | chr4.1:19810703-19810722 | MS.gene028458:CDS | 40.0% | |
TCGAGGAGATTAACACCTAT+TGG | + | chr4.1:19808804-19808823 | MS.gene028458:intron | 40.0% | |
TCTAATAATGGCAGCACAGT+TGG | + | chr4.1:19807015-19807034 | MS.gene028458:CDS | 40.0% | |
TCTCTCTGGACTTCAAGAAT+TGG | - | chr4.1:19809349-19809368 | None:intergenic | 40.0% | |
TCTTGCAATGCAACAGATTG+AGG | + | chr4.1:19810260-19810279 | MS.gene028458:CDS | 40.0% | |
TGAAGACATTCGGAATGGAA+AGG | + | chr4.1:19806853-19806872 | MS.gene028458:CDS | 40.0% | |
TGAATCAGCACAGCTTAATG+CGG | + | chr4.1:19806712-19806731 | MS.gene028458:CDS | 40.0% | |
TGCTTATAACCTACAGGATG+AGG | + | chr4.1:19810356-19810375 | MS.gene028458:CDS | 40.0% | |
TGGATGTGATGTTCTTGTGA+GGG | + | chr4.1:19810170-19810189 | MS.gene028458:CDS | 40.0% | |
TGGTTTATTGCAGGATCCAT+TGG | + | chr4.1:19808306-19808325 | MS.gene028458:intron | 40.0% | |
TGTCTCACAGGAGACATATT+TGG | + | chr4.1:19810204-19810223 | MS.gene028458:CDS | 40.0% | |
TGTGAGGTTGTAGATGATGA+TGG | + | chr4.1:19807812-19807831 | MS.gene028458:CDS | 40.0% | |
TGTTAGGACCCAATATGAGA+GGG | + | chr4.1:19807953-19807972 | MS.gene028458:intron | 40.0% | |
TTGCAGATATTGAGGGACTT+GGG | + | chr4.1:19810640-19810659 | MS.gene028458:intron | 40.0% | |
TTTATTGTGAAGCACGGAAC+TGG | + | chr4.1:19807058-19807077 | MS.gene028458:CDS | 40.0% | |
! | AATTTTCACGCTCTGCAAAC+TGG | - | chr4.1:19807865-19807884 | None:intergenic | 40.0% |
! | AGCGCAGTTAAATTTTTCCG+TGG | + | chr4.1:19808681-19808700 | MS.gene028458:intron | 40.0% |
! | ATGGTTTGTCCATTTCAGGT+AGG | + | chr4.1:19810722-19810741 | MS.gene028458:CDS | 40.0% |
! | ATTTTGTTCCTACGCAACTC+AGG | + | chr4.1:19807547-19807566 | MS.gene028458:intron | 40.0% |
! | CACTTAGCCTTTGTTATGGT+TGG | + | chr4.1:19810115-19810134 | MS.gene028458:intron | 40.0% |
! | CTCTTAGTGGATCCTATTTG+TGG | - | chr4.1:19809754-19809773 | None:intergenic | 40.0% |
! | CTGCAGTGCAAGGTATTTAA+TGG | - | chr4.1:19808637-19808656 | None:intergenic | 40.0% |
! | GGTTATGGTTTGTCCATTTC+AGG | + | chr4.1:19810718-19810737 | MS.gene028458:CDS | 40.0% |
! | GTGCTTGCTCCTAATTTTAG+AGG | + | chr4.1:19808489-19808508 | MS.gene028458:intron | 40.0% |
! | TCGACACTTAGCCTTTGTTA+TGG | + | chr4.1:19810111-19810130 | MS.gene028458:intron | 40.0% |
! | TGTTTGTGCTGTGTTACTGT+TGG | + | chr4.1:19808286-19808305 | MS.gene028458:intron | 40.0% |
! | TTCCTTTGATGGTCAACAGT+CGG | + | chr4.1:19807128-19807147 | MS.gene028458:CDS | 40.0% |
! | TTGAGCCCAACATATTTTGC+CGG | - | chr4.1:19810697-19810716 | None:intergenic | 40.0% |
! | TTGTGAGTTGAAACTCTCTC+TGG | - | chr4.1:19809363-19809382 | None:intergenic | 40.0% |
! | TTTTATATCCTGCCTGCTGA+GGG | + | chr4.1:19809293-19809312 | MS.gene028458:intron | 40.0% |
! | TTTTTATATCCTGCCTGCTG+AGG | + | chr4.1:19809292-19809311 | MS.gene028458:intron | 40.0% |
!! | TGTAGATGATGATGGTTCCA+TGG | + | chr4.1:19807820-19807839 | MS.gene028458:CDS | 40.0% |
!!! | GCCCCTATCTGAGATTTTTT+GGG | - | chr4.1:19809538-19809557 | None:intergenic | 40.0% |
!!! | GGTGCGTGCATTTTTTTATC+TGG | + | chr4.1:19807206-19807225 | MS.gene028458:intron | 40.0% |
!!! | TAGGTCACTTTTAGATGGGA+TGG | + | chr4.1:19808922-19808941 | MS.gene028458:CDS | 40.0% |
!!! | TCTTTTCTGGTTACCTATCG+AGG | + | chr4.1:19808787-19808806 | MS.gene028458:intron | 40.0% |
!!! | TTTTTTGGGACTTCTAGCCT+TGG | - | chr4.1:19809524-19809543 | None:intergenic | 40.0% |
AACCTGTTGTTACATTGCCG+TGG | + | chr4.1:19809194-19809213 | MS.gene028458:intron | 45.0% | |
AACTCACGGGAAAAAGACGA+AGG | - | chr4.1:19809560-19809579 | None:intergenic | 45.0% | |
AAGCATGAAAGAGGAAGACC+TGG | + | chr4.1:19807093-19807112 | MS.gene028458:CDS | 45.0% | |
ACCTGTGGTGGTACCATATT+TGG | - | chr4.1:19807600-19807619 | None:intergenic | 45.0% | |
ATAACCTACAGGATGAGGGA+AGG | + | chr4.1:19810361-19810380 | MS.gene028458:CDS | 45.0% | |
ATACCGCATTGCGACATGAA+GGG | - | chr4.1:19806628-19806647 | None:intergenic | 45.0% | |
ATCTTCGAGGACATGAAGGA+AGG | + | chr4.1:19810307-19810326 | MS.gene028458:CDS | 45.0% | |
ATTCCCTTCATGTCGCAATG+CGG | + | chr4.1:19806622-19806641 | MS.gene028458:CDS | 45.0% | |
ATTCTGCAGCATTGTCCTGA+TGG | + | chr4.1:19809588-19809607 | MS.gene028458:intron | 45.0% | |
CAATCTTGTGGGCATTAGAG+TGG | - | chr4.1:19809797-19809816 | None:intergenic | 45.0% | |
CAATGCGATCCTACCTGAAA+TGG | - | chr4.1:19810734-19810753 | None:intergenic | 45.0% | |
CGAATGTCTTCAATAGCCTC+AGG | - | chr4.1:19806845-19806864 | None:intergenic | 45.0% | |
CTGTCACAGTGAATGCTGTA+CGG | - | chr4.1:19807171-19807190 | None:intergenic | 45.0% | |
GACATTCGGAATGGAAAGGT+CGG | + | chr4.1:19806857-19806876 | MS.gene028458:intron | 45.0% | |
GAGACATATTTGGATCTGCC+AGG | + | chr4.1:19810214-19810233 | MS.gene028458:CDS | 45.0% | |
GATAAACTAGTGGAACGTGC+TGG | + | chr4.1:19808851-19808870 | MS.gene028458:CDS | 45.0% | |
GATAAGTTCCTGAGTTGCGT+AGG | - | chr4.1:19807558-19807577 | None:intergenic | 45.0% | |
GCTTCGTGCTTATAACCTAC+AGG | + | chr4.1:19810350-19810369 | MS.gene028458:CDS | 45.0% | |
GGAAACCAAACGTGTGAAGA+TGG | + | chr4.1:19810789-19810808 | MS.gene028458:CDS | 45.0% | |
GGAGCATATTGCGATGGTAA+AGG | + | chr4.1:19808943-19808962 | MS.gene028458:CDS | 45.0% | |
GGATACTGTAGAAGCCAATG+AGG | + | chr4.1:19810383-19810402 | MS.gene028458:CDS | 45.0% | |
GGTTATAAGCACGAAGCTTG+TGG | - | chr4.1:19810347-19810366 | None:intergenic | 45.0% | |
GTAGAAGCCAATGAGGAGTT+GGG | + | chr4.1:19810390-19810409 | MS.gene028458:CDS | 45.0% | |
GTCTTCAATAGCCTCAGGTA+TGG | - | chr4.1:19806840-19806859 | None:intergenic | 45.0% | |
GTGAAGATGGGTCACATGTA+TGG | + | chr4.1:19810802-19810821 | MS.gene028458:CDS | 45.0% | |
GTGTGACTGCGGAAATCAAT+TGG | + | chr4.1:19810236-19810255 | MS.gene028458:CDS | 45.0% | |
GTTGATCTTGCAGTACTTGC+TGG | + | chr4.1:19807767-19807786 | MS.gene028458:CDS | 45.0% | |
GTTGTGTCGGAGCTTAACTT+TGG | + | chr4.1:19808179-19808198 | MS.gene028458:intron | 45.0% | |
GTTTCTGTTAGGACCAGAGT+AGG | + | chr4.1:19808138-19808157 | MS.gene028458:intron | 45.0% | |
TAACCTACAGGATGAGGGAA+GGG | + | chr4.1:19810362-19810381 | MS.gene028458:CDS | 45.0% | |
TACAGCATTCACTGTGACAG+TGG | + | chr4.1:19807171-19807190 | MS.gene028458:CDS | 45.0% | |
TATTTGTGGACCCTGGATCA+AGG | - | chr4.1:19809740-19809759 | None:intergenic | 45.0% | |
TCTATACCTGCCAGACCAAT+AGG | - | chr4.1:19808822-19808841 | None:intergenic | 45.0% | |
TCTATTTGGATGTGTAGCCC+AGG | + | chr4.1:19809855-19809874 | MS.gene028458:intron | 45.0% | |
TCTGAGTCAGTGAGTTGTGT+CGG | + | chr4.1:19808166-19808185 | MS.gene028458:intron | 45.0% | |
TCTTCGAGGACATGAAGGAA+GGG | + | chr4.1:19810308-19810327 | MS.gene028458:CDS | 45.0% | |
TGTAGAAGCCAATGAGGAGT+TGG | + | chr4.1:19810389-19810408 | MS.gene028458:CDS | 45.0% | |
TTAGCGGGAAAATATGGCCT+GGG | - | chr4.1:19807697-19807716 | None:intergenic | 45.0% | |
TTCCCGCTAAAATACAGGGA+AGG | + | chr4.1:19807707-19807726 | MS.gene028458:CDS | 45.0% | |
TTGATCCAGGGTCCACAAAT+AGG | + | chr4.1:19809739-19809758 | MS.gene028458:intron | 45.0% | |
TTTAGCGGGAAAATATGGCC+TGG | - | chr4.1:19807698-19807717 | None:intergenic | 45.0% | |
! | AAGGAAGCTCTAATCTCTCC+AGG | - | chr4.1:19807114-19807133 | None:intergenic | 45.0% |
! | AGGTTTTGCTTCCATACCTG+AGG | + | chr4.1:19806826-19806845 | MS.gene028458:CDS | 45.0% |
! | ATTGGTCTGGCAGGTATAGA+AGG | + | chr4.1:19808822-19808841 | MS.gene028458:intron | 45.0% |
! | GACTCAAGGGAGTATGGAAT+TGG | + | chr4.1:19810423-19810442 | MS.gene028458:CDS | 45.0% |
! | GGCATTTTCTATAAGCCTGC+AGG | + | chr4.1:19810014-19810033 | MS.gene028458:intron | 45.0% |
! | GGTGTGTTGGTATATCTTCG+AGG | + | chr4.1:19810294-19810313 | MS.gene028458:CDS | 45.0% |
! | TCCTTTGATGGTCAACAGTC+GGG | + | chr4.1:19807129-19807148 | MS.gene028458:CDS | 45.0% |
! | TCTTGCAGTACTTGCTGGTT+TGG | + | chr4.1:19807772-19807791 | MS.gene028458:CDS | 45.0% |
! | TTAACACCTATTGGTCTGGC+AGG | + | chr4.1:19808813-19808832 | MS.gene028458:intron | 45.0% |
!! | CCACCTTCCCTGTATTTTAG+CGG | - | chr4.1:19807713-19807732 | None:intergenic | 45.0% |
!! | GAAGGAAGGGGTATTGGATT+GGG | + | chr4.1:19810321-19810340 | MS.gene028458:CDS | 45.0% |
!! | TGAAGGAAGGGGTATTGGAT+TGG | + | chr4.1:19810320-19810339 | MS.gene028458:CDS | 45.0% |
!!! | CACCTTCCCTGTATTTTAGC+GGG | - | chr4.1:19807712-19807731 | None:intergenic | 45.0% |
!!! | GGCCCCTATCTGAGATTTTT+TGG | - | chr4.1:19809539-19809558 | None:intergenic | 45.0% |
!!! | TGCCGATTTTCAAATCCTGC+AGG | - | chr4.1:19810032-19810051 | None:intergenic | 45.0% |
!!! | ATATAAAATTTAAAATTGAA+AGG | - | chr4.1:19810076-19810095 | None:intergenic | 5.0% |
!!! | TTTTTTTTTTTATTTTCTTT+AGG | + | chr4.1:19809946-19809965 | MS.gene028458:intron | 5.0% |
AAATTGTCTGCCAGCTGCCA+AGG | + | chr4.1:19809504-19809523 | MS.gene028458:intron | 50.0% | |
AGCCACGGCAATGTAACAAC+AGG | - | chr4.1:19809199-19809218 | None:intergenic | 50.0% | |
AGGCAATCCCAACTCCTCAT+TGG | - | chr4.1:19810400-19810419 | None:intergenic | 50.0% | |
ATGCAACAGATTGAGGCTGC+TGG | + | chr4.1:19810267-19810286 | MS.gene028458:CDS | 50.0% | |
ATGCCTACACAAGTGCAGCT+AGG | - | chr4.1:19807340-19807359 | None:intergenic | 50.0% | |
CACGGTAGCAGACAACATGA+GGG | - | chr4.1:19808409-19808428 | None:intergenic | 50.0% | |
CAGAACTCTGCAAAGCCATC+AGG | - | chr4.1:19809606-19809625 | None:intergenic | 50.0% | |
CATACCGCATTGCGACATGA+AGG | - | chr4.1:19806629-19806648 | None:intergenic | 50.0% | |
CCATACTCCCTTGAGTCAAC+AGG | - | chr4.1:19810420-19810439 | None:intergenic | 50.0% | |
CCGCTAAAATACAGGGAAGG+TGG | + | chr4.1:19807710-19807729 | MS.gene028458:CDS | 50.0% | |
CTTCGAGGACATGAAGGAAG+GGG | + | chr4.1:19810309-19810328 | MS.gene028458:CDS | 50.0% | |
GACGAGGACAGAGAAAACGA+AGG | + | chr4.1:19806989-19807008 | MS.gene028458:CDS | 50.0% | |
GACTCAGAGGAATCCTACTC+TGG | - | chr4.1:19808154-19808173 | None:intergenic | 50.0% | |
GATGATTCCAGTACTGCTCC+TGG | + | chr4.1:19810868-19810887 | MS.gene028458:CDS | 50.0% | |
GATGGGTCACATGTATGGCT+TGG | + | chr4.1:19810807-19810826 | MS.gene028458:CDS | 50.0% | |
GCCAAATATGGTACCACCAC+AGG | + | chr4.1:19807596-19807615 | MS.gene028458:CDS | 50.0% | |
GGAGTATGGAATTGGTGCAC+AGG | + | chr4.1:19810431-19810450 | MS.gene028458:CDS | 50.0% | |
GGTGGTATCTTGAAGAGAGC+TGG | + | chr4.1:19807728-19807747 | MS.gene028458:CDS | 50.0% | |
GTGACCCATCTTCACACGTT+TGG | - | chr4.1:19810797-19810816 | None:intergenic | 50.0% | |
TAACAGGGTGACATTGGGGA+TGG | + | chr4.1:19810150-19810169 | MS.gene028458:intron | 50.0% | |
TATCCCTTCCCTCATCCTGT+AGG | - | chr4.1:19810368-19810387 | None:intergenic | 50.0% | |
TCACGGTAGCAGACAACATG+AGG | - | chr4.1:19808410-19808429 | None:intergenic | 50.0% | |
TCATGTGCGTGGCTCAGATT+TGG | + | chr4.1:19806577-19806596 | MS.gene028458:CDS | 50.0% | |
TCCCGACTGTTGACCATCAA+AGG | - | chr4.1:19807133-19807152 | None:intergenic | 50.0% | |
TCGGTACTCTGTCTCTCTGT+GGG | + | chr4.1:19806876-19806895 | MS.gene028458:intron | 50.0% | |
TCTGCAAACTGGCGAAGCTT+AGG | - | chr4.1:19807854-19807873 | None:intergenic | 50.0% | |
TGCCTACACAAGTGCAGCTA+GGG | - | chr4.1:19807339-19807358 | None:intergenic | 50.0% | |
TGGATCCTATTTGTGGACCC+TGG | - | chr4.1:19809747-19809766 | None:intergenic | 50.0% | |
TGGGATGGAGCATATTGCGA+TGG | + | chr4.1:19808937-19808956 | MS.gene028458:CDS | 50.0% | |
TTATGTGCCAGGAGCAGTAC+TGG | - | chr4.1:19810878-19810897 | None:intergenic | 50.0% | |
TTATTACACCCTCAGCAGGC+AGG | - | chr4.1:19809304-19809323 | None:intergenic | 50.0% | |
TTGATTTCCGCAGTCACACC+TGG | - | chr4.1:19810235-19810254 | None:intergenic | 50.0% | |
TTGGATGTGTAGCCCAGGAA+TGG | + | chr4.1:19809860-19809879 | MS.gene028458:intron | 50.0% | |
! | GATACAGCTCTAACAGGCAG+TGG | + | chr4.1:19806758-19806777 | MS.gene028458:CDS | 50.0% |
! | GGACATGAAGGAAGGGGTAT+TGG | + | chr4.1:19810315-19810334 | MS.gene028458:CDS | 50.0% |
! | GGATAGGGCAACCACAGTTT+TGG | + | chr4.1:19807631-19807650 | MS.gene028458:CDS | 50.0% |
! | GGTAGTGGTTGTAGATGACG+AGG | + | chr4.1:19806973-19806992 | MS.gene028458:CDS | 50.0% |
! | GTACACTCAGAGTGTCTCAC+AGG | + | chr4.1:19810192-19810211 | MS.gene028458:CDS | 50.0% |
! | GTTAAAGCTGCGTTGACCTC+TGG | + | chr4.1:19806653-19806672 | MS.gene028458:CDS | 50.0% |
!! | ACTTGCTGGTTTGGATCCTG+TGG | + | chr4.1:19807781-19807800 | MS.gene028458:CDS | 50.0% |
!! | CCTGTTGACTCAAGGGAGTA+TGG | + | chr4.1:19810417-19810436 | MS.gene028458:CDS | 50.0% |
!! | GACACAACTCACTGACTCAG+AGG | - | chr4.1:19808167-19808186 | None:intergenic | 50.0% |
!! | GGGATTGCCTGTTGACTCAA+GGG | + | chr4.1:19810410-19810429 | MS.gene028458:CDS | 50.0% |
!! | TGGGATTGCCTGTTGACTCA+AGG | + | chr4.1:19810409-19810428 | MS.gene028458:CDS | 50.0% |
!! | TTTTAGGTCTCCTCCTCCAG+AGG | - | chr4.1:19806672-19806691 | None:intergenic | 50.0% |
ACCTCACACAGAACTGCCAC+AGG | - | chr4.1:19807800-19807819 | None:intergenic | 55.0% | |
AGCACAGTTGGCAACACCTG+AGG | + | chr4.1:19807027-19807046 | MS.gene028458:CDS | 55.0% | |
CAGCTTAATGCGGTAGCGCT+TGG | + | chr4.1:19806722-19806741 | MS.gene028458:CDS | 55.0% | |
CCAAGTGATTTCAACCGCCC+AGG | + | chr4.1:19807677-19807696 | MS.gene028458:CDS | 55.0% | |
CCTGGGCGGTTGAAATCACT+TGG | - | chr4.1:19807680-19807699 | None:intergenic | 55.0% | |
GATGACTAGATCCCTGGGAC+TGG | - | chr4.1:19809833-19809852 | None:intergenic | 55.0% | |
GGACATTCATCTGCCTGCTC+AGG | - | chr4.1:19809673-19809692 | None:intergenic | 55.0% | |
GGATGCAAGGGCCAAAACTG+TGG | - | chr4.1:19807645-19807664 | None:intergenic | 55.0% | |
GTCGGTACTCTGTCTCTCTG+TGG | + | chr4.1:19806875-19806894 | MS.gene028458:intron | 55.0% | |
GTGAATGGCCCCCACATTGT+TGG | - | chr4.1:19808890-19808909 | None:intergenic | 55.0% | |
GTTGGCAACACCTGAGGCTA+TGG | + | chr4.1:19807033-19807052 | MS.gene028458:CDS | 55.0% | |
TCCTGTGGCAGTTCTGTGTG+AGG | + | chr4.1:19807796-19807815 | MS.gene028458:CDS | 55.0% | |
TGAAGTCTTGGCCAGTCCCA+GGG | + | chr4.1:19809819-19809838 | MS.gene028458:intron | 55.0% | |
TGGTACCACCACAGGTGTGT+CGG | + | chr4.1:19807604-19807623 | MS.gene028458:CDS | 55.0% | |
! | AAAGCTGCGTTGACCTCTGG+AGG | + | chr4.1:19806656-19806675 | MS.gene028458:CDS | 55.0% |
! | GGGGCAGATACAGCTCTAAC+AGG | + | chr4.1:19806752-19806771 | MS.gene028458:CDS | 55.0% |
!! | AGGTGTGTCGGCTCAGGATA+GGG | + | chr4.1:19807616-19807635 | MS.gene028458:CDS | 55.0% |
ATCCTGAGCCGACACACCTG+TGG | - | chr4.1:19807615-19807634 | None:intergenic | 60.0% | |
CAGATTGAGGCTGCTGGCAG+AGG | + | chr4.1:19810273-19810292 | MS.gene028458:CDS | 60.0% | |
CGCCCTAGCTGCACTTGTGT+AGG | + | chr4.1:19807334-19807353 | MS.gene028458:intron | 60.0% | |
CGGTAGCGCTTGGAACACTG+GGG | + | chr4.1:19806732-19806751 | MS.gene028458:CDS | 60.0% | |
GCGGGAAAATATGGCCTGGG+CGG | - | chr4.1:19807694-19807713 | None:intergenic | 60.0% | |
GCGGTAGCGCTTGGAACACT+GGG | + | chr4.1:19806731-19806750 | MS.gene028458:CDS | 60.0% | |
GGATCTGCCAGGTGTGACTG+CGG | + | chr4.1:19810225-19810244 | MS.gene028458:CDS | 60.0% | |
GGTAGCGCTTGGAACACTGG+GGG | + | chr4.1:19806733-19806752 | MS.gene028458:CDS | 60.0% | |
GTGAAGTCTTGGCCAGTCCC+AGG | + | chr4.1:19809818-19809837 | MS.gene028458:intron | 60.0% | |
TGCGGTAGCGCTTGGAACAC+TGG | + | chr4.1:19806730-19806749 | MS.gene028458:CDS | 60.0% | |
!! | CAGGTGTGTCGGCTCAGGAT+AGG | + | chr4.1:19807615-19807634 | MS.gene028458:CDS | 60.0% |
!! | GGACTTCTAGCCTTGGCAGC+TGG | - | chr4.1:19809517-19809536 | None:intergenic | 60.0% |
CTGAGCCGACACACCTGTGG+TGG | - | chr4.1:19807612-19807631 | None:intergenic | 65.0% | |
! | GCTGCGTTGACCTCTGGAGG+AGG | + | chr4.1:19806659-19806678 | MS.gene028458:CDS | 65.0% |
! | GGCTGCTGGCAGAGGTGTGT+TGG | + | chr4.1:19810281-19810300 | MS.gene028458:CDS | 65.0% |
!! | CACCACAGGTGTGTCGGCTC+AGG | + | chr4.1:19807610-19807629 | MS.gene028458:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.1 | gene | 19806572 | 19810897 | 19806572 | ID=MS.gene028458 |
chr4.1 | mRNA | 19806572 | 19810897 | 19806572 | ID=MS.gene028458.t1;Parent=MS.gene028458 |
chr4.1 | exon | 19806572 | 19806874 | 19806572 | ID=MS.gene028458.t1.exon1;Parent=MS.gene028458.t1 |
chr4.1 | CDS | 19806572 | 19806874 | 19806572 | ID=cds.MS.gene028458.t1;Parent=MS.gene028458.t1 |
chr4.1 | exon | 19806971 | 19807192 | 19806971 | ID=MS.gene028458.t1.exon2;Parent=MS.gene028458.t1 |
chr4.1 | CDS | 19806971 | 19807192 | 19806971 | ID=cds.MS.gene028458.t1;Parent=MS.gene028458.t1 |
chr4.1 | exon | 19807593 | 19807915 | 19807593 | ID=MS.gene028458.t1.exon3;Parent=MS.gene028458.t1 |
chr4.1 | CDS | 19807593 | 19807915 | 19807593 | ID=cds.MS.gene028458.t1;Parent=MS.gene028458.t1 |
chr4.1 | exon | 19808835 | 19808964 | 19808835 | ID=MS.gene028458.t1.exon4;Parent=MS.gene028458.t1 |
chr4.1 | CDS | 19808835 | 19808964 | 19808835 | ID=cds.MS.gene028458.t1;Parent=MS.gene028458.t1 |
chr4.1 | exon | 19810156 | 19810452 | 19810156 | ID=MS.gene028458.t1.exon5;Parent=MS.gene028458.t1 |
chr4.1 | CDS | 19810156 | 19810452 | 19810156 | ID=cds.MS.gene028458.t1;Parent=MS.gene028458.t1 |
chr4.1 | exon | 19810646 | 19810897 | 19810646 | ID=MS.gene028458.t1.exon6;Parent=MS.gene028458.t1 |
chr4.1 | CDS | 19810646 | 19810897 | 19810646 | ID=cds.MS.gene028458.t1;Parent=MS.gene028458.t1 |
Gene Sequence |
Protein sequence |