Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene029871.t1 | XP_013468242.1 | 82.8 | 586 | 101 | 0 | 1 | 586 | 1 | 586 | 3.00E-125 | 459.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene029871.t1 | Q9ZQC5 | 34.6 | 624 | 329 | 11 | 1 | 586 | 1 | 583 | 1.2e-29 | 132.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene029871.t1 | A0A072VJQ3 | 82.8 | 586 | 101 | 0 | 1 | 586 | 1 | 586 | 2.1e-125 | 459.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene33795 | MS.gene029871 | PPI |
| MS.gene029871 | MS.gene008635 | PPI |
| MS.gene029871 | MS.gene015702 | PPI |
| MS.gene029871 | MS.gene034650 | PPI |
| MS.gene029871 | MS.gene57038 | PPI |
| MS.gene029871 | MS.gene020474 | PPI |
| MS.gene029871 | MS.gene93135 | PPI |
| MS.gene029871 | MS.gene009801 | PPI |
| MS.gene029871 | MS.gene05775 | PPI |
| MS.gene029871 | MS.gene048551 | PPI |
| MS.gene029871 | MS.gene064148 | PPI |
| MS.gene030154 | MS.gene029871 | PPI |
| MS.gene029871 | MS.gene23912 | PPI |
| MS.gene029871 | MS.gene31961 | PPI |
| MS.gene029871 | MS.gene037356 | PPI |
| MS.gene029871 | MS.gene54155 | PPI |
| MS.gene029871 | MS.gene56986 | PPI |
| MS.gene029871 | MS.gene065074 | PPI |
| MS.gene029871 | MS.gene39229 | PPI |
| MS.gene029871 | MS.gene50208 | PPI |
| MS.gene029871 | MS.gene063692 | PPI |
| MS.gene029871 | MS.gene03912 | PPI |
| MS.gene029871 | MS.gene39455 | PPI |
| MS.gene029871 | MS.gene31930 | PPI |
| MS.gene029871 | MS.gene26785 | PPI |
| MS.gene029871 | MS.gene029219 | PPI |
| MS.gene029871 | MS.gene68625 | PPI |
| MS.gene029871 | MS.gene76250 | PPI |
| MS.gene029871 | MS.gene029217 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene029871.t1 | MTR_1g066850 | 96.758 | 586 | 19 | 0 | 1 | 586 | 1 | 586 | 0.0 | 1122 |
| MS.gene029871.t1 | MTR_7g100730 | 62.219 | 622 | 187 | 7 | 1 | 586 | 1 | 610 | 0.0 | 638 |
| MS.gene029871.t1 | MTR_4g461060 | 44.374 | 631 | 289 | 9 | 1 | 583 | 1 | 617 | 1.06e-134 | 406 |
| MS.gene029871.t1 | MTR_4g461060 | 44.249 | 626 | 287 | 9 | 6 | 583 | 3 | 614 | 1.07e-132 | 401 |
| MS.gene029871.t1 | MTR_7g061150 | 63.102 | 374 | 94 | 5 | 245 | 586 | 2 | 363 | 1.38e-128 | 381 |
| MS.gene029871.t1 | MTR_2g093260 | 41.763 | 431 | 182 | 10 | 191 | 583 | 83 | 482 | 1.52e-69 | 233 |
| MS.gene029871.t1 | MTR_2g093240 | 35.088 | 114 | 39 | 2 | 473 | 586 | 3 | 81 | 6.99e-14 | 67.8 |
| MS.gene029871.t1 | MTR_5g007350 | 29.304 | 273 | 145 | 9 | 12 | 250 | 38 | 296 | 8.11e-14 | 75.1 |
| MS.gene029871.t1 | MTR_4g478190 | 27.829 | 327 | 190 | 11 | 7 | 287 | 8 | 334 | 8.40e-11 | 65.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene029871.t1 | AT2G37080 | 46.178 | 641 | 230 | 14 | 1 | 586 | 1 | 581 | 2.78e-146 | 435 |
| MS.gene029871.t1 | AT2G37080 | 46.034 | 643 | 230 | 15 | 1 | 586 | 1 | 583 | 2.75e-144 | 430 |
| MS.gene029871.t1 | AT2G37080 | 46.034 | 643 | 230 | 15 | 1 | 586 | 1 | 583 | 2.75e-144 | 430 |
| MS.gene029871.t1 | AT5G60210 | 39.350 | 615 | 287 | 12 | 1 | 583 | 1 | 561 | 5.09e-106 | 330 |
| MS.gene029871.t1 | AT5G60210 | 39.350 | 615 | 287 | 12 | 1 | 583 | 1 | 561 | 5.09e-106 | 330 |
| MS.gene029871.t1 | AT5G60210 | 39.350 | 615 | 287 | 12 | 1 | 583 | 1 | 561 | 5.09e-106 | 330 |
| MS.gene029871.t1 | AT5G60210 | 39.350 | 615 | 287 | 12 | 1 | 583 | 1 | 561 | 5.09e-106 | 330 |
| MS.gene029871.t1 | AT5G60210 | 38.689 | 610 | 288 | 12 | 6 | 583 | 30 | 585 | 2.25e-101 | 319 |
| MS.gene029871.t1 | AT5G60210 | 38.689 | 610 | 288 | 12 | 6 | 583 | 30 | 585 | 2.25e-101 | 319 |
| MS.gene029871.t1 | AT3G53350 | 37.730 | 326 | 150 | 11 | 1 | 300 | 1 | 299 | 1.80e-45 | 166 |
| MS.gene029871.t1 | AT3G53350 | 33.750 | 320 | 103 | 8 | 275 | 586 | 176 | 394 | 3.04e-30 | 123 |
| MS.gene029871.t1 | AT3G53350 | 37.730 | 326 | 150 | 11 | 1 | 300 | 1 | 299 | 1.80e-45 | 166 |
| MS.gene029871.t1 | AT3G53350 | 33.750 | 320 | 103 | 8 | 275 | 586 | 176 | 394 | 3.04e-30 | 123 |
| MS.gene029871.t1 | AT3G53350 | 37.500 | 328 | 150 | 12 | 1 | 300 | 1 | 301 | 1.70e-43 | 160 |
| MS.gene029871.t1 | AT3G53350 | 33.750 | 320 | 103 | 8 | 275 | 586 | 178 | 396 | 3.91e-30 | 122 |
| MS.gene029871.t1 | AT3G53350 | 37.500 | 328 | 150 | 12 | 1 | 300 | 1 | 301 | 1.70e-43 | 160 |
| MS.gene029871.t1 | AT3G53350 | 33.750 | 320 | 103 | 8 | 275 | 586 | 178 | 396 | 3.91e-30 | 122 |
| MS.gene029871.t1 | AT3G53350 | 37.500 | 328 | 150 | 12 | 1 | 300 | 1 | 301 | 1.70e-43 | 160 |
| MS.gene029871.t1 | AT3G53350 | 33.750 | 320 | 103 | 8 | 275 | 586 | 178 | 396 | 3.91e-30 | 122 |
| MS.gene029871.t1 | AT3G53350 | 37.188 | 320 | 148 | 11 | 7 | 300 | 18 | 310 | 1.11e-42 | 158 |
| MS.gene029871.t1 | AT3G53350 | 33.750 | 320 | 103 | 8 | 275 | 586 | 187 | 405 | 6.45e-30 | 122 |
| MS.gene029871.t1 | AT3G53350 | 36.957 | 322 | 148 | 12 | 7 | 300 | 18 | 312 | 6.79e-41 | 153 |
| MS.gene029871.t1 | AT3G53350 | 33.750 | 320 | 103 | 8 | 275 | 586 | 189 | 407 | 6.59e-30 | 122 |
| MS.gene029871.t1 | AT3G53350 | 36.957 | 322 | 148 | 12 | 7 | 300 | 18 | 312 | 6.79e-41 | 153 |
| MS.gene029871.t1 | AT3G53350 | 33.750 | 320 | 103 | 8 | 275 | 586 | 189 | 407 | 6.59e-30 | 122 |
| MS.gene029871.t1 | AT3G53350 | 34.551 | 356 | 150 | 12 | 1 | 300 | 1 | 329 | 1.93e-39 | 149 |
| MS.gene029871.t1 | AT3G53350 | 33.750 | 320 | 103 | 8 | 275 | 586 | 206 | 424 | 2.68e-29 | 120 |
| MS.gene029871.t1 | AT1G78430 | 38.418 | 177 | 93 | 4 | 411 | 586 | 162 | 323 | 1.42e-21 | 96.7 |
| MS.gene029871.t1 | AT1G17140 | 33.632 | 223 | 125 | 10 | 373 | 586 | 135 | 343 | 3.50e-14 | 74.7 |
| MS.gene029871.t1 | AT1G17140 | 33.632 | 223 | 125 | 10 | 373 | 586 | 135 | 343 | 3.50e-14 | 74.7 |
| MS.gene029871.t1 | AT5G16730 | 28.646 | 384 | 207 | 14 | 19 | 346 | 24 | 396 | 1.97e-11 | 67.4 |
Find 110 sgRNAs with CRISPR-Local
Find 172 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGTCCATTGAATGCTGTTTC+TGG | 0.148564 | 1.4:-53719142 | None:intergenic |
| GGCTACAACAATTCTATTAT+TGG | 0.202521 | 1.4:+53720289 | MS.gene029871:CDS |
| CTTTGTGTTGACTTGACATT+TGG | 0.212610 | 1.4:-53718598 | None:intergenic |
| ACATTTGGGCTCCTATCTTT+TGG | 0.249382 | 1.4:-53718583 | None:intergenic |
| TGCTGCACAGGCGTCGAATT+TGG | 0.249460 | 1.4:+53720132 | MS.gene029871:CDS |
| ACAACAATGTTGAAGAAAAT+TGG | 0.253316 | 1.4:+53720373 | MS.gene029871:CDS |
| GGAATCACAGCGGCAACTTC+TGG | 0.253438 | 1.4:+53719028 | MS.gene029871:CDS |
| TCTAGAAGAACGGAACAAAT+AGG | 0.282502 | 1.4:+53718853 | MS.gene029871:intron |
| AACAAATAGGGTACAAGAAT+TGG | 0.301512 | 1.4:+53718866 | MS.gene029871:CDS |
| TTAAAATGTACCTCAGATAT+TGG | 0.304349 | 1.4:-53718622 | None:intergenic |
| ATTTGAAGGAGATTTCTTTC+GGG | 0.319999 | 1.4:-53718479 | None:intergenic |
| TGAGTTGAAGGCAAGATTAT+TGG | 0.325711 | 1.4:+53719889 | MS.gene029871:CDS |
| AATTCGCTCATCTTCAGAAT+TGG | 0.329594 | 1.4:-53719057 | None:intergenic |
| TGGAGCTAGAGGCTGAATTA+AGG | 0.329640 | 1.4:+53720152 | MS.gene029871:CDS |
| TTCTAATCTGCAATGTGCTT+TGG | 0.333283 | 1.4:-53719715 | None:intergenic |
| GAGCAAACTTCAGGAGGATT+TGG | 0.333490 | 1.4:+53719532 | MS.gene029871:CDS |
| GATTTGAAGGAGATTTCTTT+CGG | 0.346603 | 1.4:-53718480 | None:intergenic |
| GCTGCTGCTATGATTTCTTC+TGG | 0.352673 | 1.4:+53720220 | MS.gene029871:CDS |
| AGAGTTAAGGGCACAATTGA+TGG | 0.353098 | 1.4:+53719832 | MS.gene029871:CDS |
| AAGCCGATGTTGAAGAGTTA+AGG | 0.383364 | 1.4:+53719819 | MS.gene029871:CDS |
| CCGACTCAGCATTGTCAATC+CGG | 0.388026 | 1.4:-53719244 | None:intergenic |
| TTTGTGTTGACTTGACATTT+GGG | 0.392895 | 1.4:-53718597 | None:intergenic |
| CTTTAGAGTTAGAGAAATCA+AGG | 0.395892 | 1.4:+53719480 | MS.gene029871:CDS |
| CAAATAAAACTCCAAAAGAT+AGG | 0.409278 | 1.4:+53718572 | MS.gene029871:CDS |
| GGAACTTGTGAGCAAACTTC+AGG | 0.419432 | 1.4:+53719523 | MS.gene029871:CDS |
| TCATCAGTTTCTTCTGCATA+AGG | 0.424746 | 1.4:-53720328 | None:intergenic |
| GAGGATTTGGTCAGTGGAGT+TGG | 0.426678 | 1.4:+53719545 | MS.gene029871:CDS |
| ATCTCCTCGCTTACCTGCAT+TGG | 0.427114 | 1.4:+53719571 | MS.gene029871:CDS |
| CTAGAAGAACGGAACAAATA+GGG | 0.430567 | 1.4:+53718854 | MS.gene029871:intron |
| AGAACTAAGGAAAATTTCTC+AGG | 0.434914 | 1.4:+53719082 | MS.gene029871:CDS |
| GTGAGCAGAAATGGTGCATC+AGG | 0.435653 | 1.4:+53718451 | MS.gene029871:intron |
| ACGACTGGAGAACACGAAAT+CGG | 0.446862 | 1.4:+53719748 | MS.gene029871:CDS |
| TTGCTTCCGCTGAGGCAGCA+AGG | 0.447445 | 1.4:+53720014 | MS.gene029871:CDS |
| GTGGAAACGCTCCGATTAGA+AGG | 0.448481 | 1.4:+53719425 | MS.gene029871:CDS |
| ATTGTCAATCCGGGTAGCTT+CGG | 0.452103 | 1.4:-53719234 | None:intergenic |
| CGAGCAGTCCGAGGATTTGA+AGG | 0.453421 | 1.4:-53718493 | None:intergenic |
| AGCCGATGTTGAAGAGTTAA+GGG | 0.459023 | 1.4:+53719820 | MS.gene029871:CDS |
| TTTATCCATGTCAAGAGAGT+TGG | 0.461170 | 1.4:+53719004 | MS.gene029871:CDS |
| GCTCGCAAGACGAAGTCATC+AGG | 0.465959 | 1.4:+53718511 | MS.gene029871:CDS |
| GTTTCAGTTAAAGCTGAAGC+AGG | 0.470076 | 1.4:+53719638 | MS.gene029871:CDS |
| TAGTACAACTCAAATGCAAT+TGG | 0.474267 | 1.4:+53719385 | MS.gene029871:CDS |
| AGAATCTGAATCACAGGCAT+TGG | 0.474276 | 1.4:+53719355 | MS.gene029871:CDS |
| ATCCATGTCAAGAGAGTTGG+AGG | 0.474312 | 1.4:+53719007 | MS.gene029871:CDS |
| CAGTTACACGTGCTATCATT+CGG | 0.476141 | 1.4:-53720099 | None:intergenic |
| AGCAAGGGCCGCAGAGCGAG+AGG | 0.479702 | 1.4:+53720030 | MS.gene029871:CDS |
| TGCTTCCGCTGAGGCAGCAA+GGG | 0.480232 | 1.4:+53720015 | MS.gene029871:CDS |
| AGAGAACAATACACTTAAGA+TGG | 0.481927 | 1.4:+53719943 | MS.gene029871:CDS |
| CGTGTTCTCCAGTCGTTCAA+AGG | 0.483336 | 1.4:-53719741 | None:intergenic |
| TAGAAGTGCCTTTGAACGAC+TGG | 0.486503 | 1.4:+53719733 | MS.gene029871:CDS |
| ACTGAAAATGCAACTTGAAA+GGG | 0.492360 | 1.4:+53719202 | MS.gene029871:CDS |
| CAGACTGCCATTCTCGATCT+CGG | 0.499415 | 1.4:-53719106 | None:intergenic |
| TGCCCTTAACTCTTCAACAT+CGG | 0.502854 | 1.4:-53719822 | None:intergenic |
| AAACAAGCTCGGCTTTGAGC+CGG | 0.506146 | 1.4:-53719619 | None:intergenic |
| TTTCTCTAACTCTAAAGCTA+AGG | 0.508714 | 1.4:-53719474 | None:intergenic |
| AAGACAAGCTGAATTATATG+AGG | 0.509050 | 1.4:+53719781 | MS.gene029871:CDS |
| TGCGGCCCTTGCTGCCTCAG+CGG | 0.514799 | 1.4:-53720020 | None:intergenic |
| AGCTTTAACTGAAACAAGCT+CGG | 0.514900 | 1.4:-53719630 | None:intergenic |
| TAGAAAGCGAGGAGATAAAC+CGG | 0.516380 | 1.4:+53719600 | MS.gene029871:CDS |
| TAGTGATGTGGCTGAGTTGA+AGG | 0.519057 | 1.4:+53719877 | MS.gene029871:CDS |
| CTCAGGACCGAGATCGAGAA+TGG | 0.519589 | 1.4:+53719099 | MS.gene029871:CDS |
| CTTTCTACAACTTCCAATGC+AGG | 0.520191 | 1.4:-53719584 | None:intergenic |
| AACTGAAAATGCAACTTGAA+AGG | 0.523112 | 1.4:+53719201 | MS.gene029871:CDS |
| CTTCAGGAGGATTTGGTCAG+TGG | 0.532629 | 1.4:+53719539 | MS.gene029871:CDS |
| ATGAGCGAATTCAAGAACTA+AGG | 0.533335 | 1.4:+53719069 | MS.gene029871:CDS |
| AGGCTGAAGATGCAAAGAAT+CGG | 0.535803 | 1.4:+53718979 | MS.gene029871:CDS |
| CACGTGAATCCGAAGCTACC+CGG | 0.535832 | 1.4:+53719225 | MS.gene029871:CDS |
| GAAGAATAAAATCACGGATG+AGG | 0.536894 | 1.4:+53719988 | MS.gene029871:CDS |
| TGAAAGTTCAGTCAGATCAA+TGG | 0.538570 | 1.4:+53720179 | MS.gene029871:CDS |
| AGAAATCTCCTTCAAATCCT+CGG | 0.539368 | 1.4:+53718485 | MS.gene029871:CDS |
| CTAACTCTAAAGCTAAGGAT+TGG | 0.544112 | 1.4:-53719469 | None:intergenic |
| ATTTCTTCTGGAAACAACAA+TGG | 0.545987 | 1.4:+53720232 | MS.gene029871:CDS |
| TTGTAGAGAATCTGAATCAC+AGG | 0.546987 | 1.4:+53719349 | MS.gene029871:CDS |
| TTATTTGCTGGGTTTGAAGA+CGG | 0.550271 | 1.4:-53718556 | None:intergenic |
| AAGGTCTCAAGTAAACTCAC+TGG | 0.551394 | 1.4:+53719499 | MS.gene029871:CDS |
| TGAGGAGTTAGATGCTGCAC+AGG | 0.555058 | 1.4:+53720120 | MS.gene029871:CDS |
| CCGGATTGACAATGCTGAGT+CGG | 0.555729 | 1.4:+53719244 | MS.gene029871:CDS |
| TTTGTCTACCTCTAGAAGAA+CGG | 0.558111 | 1.4:+53718843 | MS.gene029871:intron |
| TGTCCAGAAACAGCATTCAA+TGG | 0.563463 | 1.4:+53719139 | MS.gene029871:CDS |
| CGACTCAGCATTGTCAATCC+GGG | 0.566102 | 1.4:-53719243 | None:intergenic |
| ATCTGCATTGGATGCTGCCG+AGG | 0.566446 | 1.4:+53719670 | MS.gene029871:CDS |
| TAAGATGGAAATAAAGAGAG+AGG | 0.579267 | 1.4:+53719958 | MS.gene029871:CDS |
| AGGGCAGTTAAAATCTGCAT+TGG | 0.583728 | 1.4:+53719658 | MS.gene029871:CDS |
| TGAAGAAAATTGGAGTGTTG+TGG | 0.584300 | 1.4:+53720383 | MS.gene029871:CDS |
| ATGCTGAGATTCAAGACTTG+AGG | 0.592935 | 1.4:+53719270 | MS.gene029871:CDS |
| TTCGTCTTGCGAGCAGTCCG+AGG | 0.602923 | 1.4:-53718502 | None:intergenic |
| GTTAGAGAAGAATAAAATCA+CGG | 0.606698 | 1.4:+53719982 | MS.gene029871:CDS |
| TTCCTCCAACTCTCTTGACA+TGG | 0.607195 | 1.4:-53719009 | None:intergenic |
| GGGTACAAGAATTGGAGTCT+CGG | 0.608303 | 1.4:+53718874 | MS.gene029871:CDS |
| GGCGTCGAATTTGGAGCTAG+AGG | 0.618660 | 1.4:+53720141 | MS.gene029871:CDS |
| GTGATTCAGATTCTCTACAA+TGG | 0.621611 | 1.4:-53719346 | None:intergenic |
| CTCGTTCTGATATCTTACCT+CGG | 0.626347 | 1.4:-53719687 | None:intergenic |
| AGAATGGCAGTCTGAACTAG+AGG | 0.628151 | 1.4:+53719115 | MS.gene029871:CDS |
| ACTTGTGAGCAAACTTCAGG+AGG | 0.628772 | 1.4:+53719526 | MS.gene029871:CDS |
| TTTGAAGGAGATTTCTTTCG+GGG | 0.632584 | 1.4:-53718478 | None:intergenic |
| ACTTCCAATGCAGGTAAGCG+AGG | 0.632899 | 1.4:-53719575 | None:intergenic |
| GTCTCAAGTAAACTCACTGG+AGG | 0.639006 | 1.4:+53719502 | MS.gene029871:CDS |
| TGAGGCTGTTGCTTCCGCTG+AGG | 0.639415 | 1.4:+53720006 | MS.gene029871:CDS |
| GAAGATAAAAGCTCAACATG+AGG | 0.639716 | 1.4:+53718959 | MS.gene029871:CDS |
| TGAGATTCAAGACTTGAGGA+TGG | 0.640348 | 1.4:+53719274 | MS.gene029871:CDS |
| TTTCAGTTAAAGCTGAAGCA+GGG | 0.641574 | 1.4:+53719639 | MS.gene029871:CDS |
| AACACAAAGTCCAATATCTG+AGG | 0.651330 | 1.4:+53718612 | MS.gene029871:CDS |
| AAGTTCAGTCAGATCAATGG+AGG | 0.671435 | 1.4:+53720182 | MS.gene029871:CDS |
| AATGATAGCACGTGTAACTG+AGG | 0.673722 | 1.4:+53720102 | MS.gene029871:CDS |
| ATTGGAAGTTGTAGAAAGCG+AGG | 0.674711 | 1.4:+53719589 | MS.gene029871:CDS |
| TGGGTTTGAAGACGGCGAAG+CGG | 0.677416 | 1.4:-53718548 | None:intergenic |
| GGAAGCTGCAAATAAGACAG+TGG | 0.693575 | 1.4:+53719406 | MS.gene029871:CDS |
| TGTCAAAGCCTCTCGCTCTG+CGG | 0.698809 | 1.4:-53720038 | None:intergenic |
| AGAACTGGTTCACTTGACAG+TGG | 0.718014 | 1.4:+53720268 | MS.gene029871:CDS |
| TCATTTGCAAGATAGTGATG+TGG | 0.731331 | 1.4:+53719865 | MS.gene029871:CDS |
| GAGAGTTGGAGGAATCACAG+CGG | 0.814737 | 1.4:+53719018 | MS.gene029871:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATTATACATTCTATTTAA+TGG | - | chr1.4:53718042-53718061 | None:intergenic | 10.0% |
| !!! | TTCAGATTTTTTTAAAAAAA+AGG | - | chr1.4:53717870-53717889 | None:intergenic | 10.0% |
| !! | AAACAATTGTAAATATTTCT+GGG | + | chr1.4:53717985-53718004 | MS.gene029871:intron | 15.0% |
| !! | AAACAACAATGGAAAAATTA+TGG | + | chr1.4:53720243-53720262 | MS.gene029871:CDS | 20.0% |
| !! | CAAACAATTGTAAATATTTC+TGG | + | chr1.4:53717984-53718003 | MS.gene029871:intron | 20.0% |
| !! | TCCTGTTTATGAAAAATATT+TGG | + | chr1.4:53718189-53718208 | MS.gene029871:intron | 20.0% |
| !! | TGGTTGTACTATAATTTATA+AGG | + | chr1.4:53717838-53717857 | MS.gene029871:intron | 20.0% |
| !!! | ATTATTTCTTCAGATTTCTT+TGG | - | chr1.4:53718080-53718099 | None:intergenic | 20.0% |
| !!! | ATTGTTGTATTTTTCTTCTT+AGG | - | chr1.4:53720361-53720380 | None:intergenic | 20.0% |
| !!! | TTTTCTTATAAGTAGTGAAT+AGG | - | chr1.4:53718137-53718156 | None:intergenic | 20.0% |
| ! | AATTATATAGGGTCTAAATG+AGG | + | chr1.4:53717784-53717803 | MS.gene029871:intron | 25.0% |
| ! | AATTGCAAAGATGAAAAATG+AGG | + | chr1.4:53719319-53719338 | MS.gene029871:CDS | 25.0% |
| ! | AATTTACACATATCACAATG+AGG | - | chr1.4:53718364-53718383 | None:intergenic | 25.0% |
| ! | ACAACAATGTTGAAGAAAAT+TGG | + | chr1.4:53720373-53720392 | MS.gene029871:CDS | 25.0% |
| ! | ATTATATAGGGTCTAAATGA+GGG | + | chr1.4:53717785-53717804 | MS.gene029871:intron | 25.0% |
| ! | CAAATAAAACTCCAAAAGAT+AGG | + | chr1.4:53718572-53718591 | MS.gene029871:CDS | 25.0% |
| ! | GAAATTACCAATAATCACAA+TGG | - | chr1.4:53718673-53718692 | None:intergenic | 25.0% |
| ! | GGAATAAATAACTAGATACT+TGG | + | chr1.4:53718704-53718723 | MS.gene029871:intron | 25.0% |
| ! | GTCTTCAGTCAAATTATATA+GGG | + | chr1.4:53717773-53717792 | MS.gene029871:intron | 25.0% |
| ! | GTTAGAGAAGAATAAAATCA+CGG | + | chr1.4:53719982-53720001 | MS.gene029871:CDS | 25.0% |
| ! | TATATAATTTGACTGAAGAC+AGG | - | chr1.4:53717773-53717792 | None:intergenic | 25.0% |
| ! | TCAATTCCATGAATACAAAT+AGG | - | chr1.4:53717905-53717924 | None:intergenic | 25.0% |
| ! | TCACTACTTATAAGAAAACT+AGG | + | chr1.4:53718139-53718158 | MS.gene029871:intron | 25.0% |
| ! | TGCAAATTTCTTGAATAGAA+TGG | - | chr1.4:53718304-53718323 | None:intergenic | 25.0% |
| ! | TGTCTTCAGTCAAATTATAT+AGG | + | chr1.4:53717772-53717791 | MS.gene029871:intron | 25.0% |
| ! | TTAAAATGTACCTCAGATAT+TGG | - | chr1.4:53718625-53718644 | None:intergenic | 25.0% |
| !! | AAATATTGTCGTTTCATAGA+AGG | - | chr1.4:53718227-53718246 | None:intergenic | 25.0% |
| !! | AATATTGTCGTTTCATAGAA+GGG | - | chr1.4:53718226-53718245 | None:intergenic | 25.0% |
| !! | CTATGAAACGACAATATTTT+GGG | + | chr1.4:53718228-53718247 | MS.gene029871:intron | 25.0% |
| !! | GCCAAATATTTTTCATAAAC+AGG | - | chr1.4:53718193-53718212 | None:intergenic | 25.0% |
| !! | TAAGCATGTTGATTGAAATA+TGG | + | chr1.4:53718422-53718441 | MS.gene029871:intron | 25.0% |
| !! | TCTATGAAACGACAATATTT+TGG | + | chr1.4:53718227-53718246 | MS.gene029871:intron | 25.0% |
| !! | TGTGATTATTGGTAATTTCA+TGG | + | chr1.4:53718674-53718693 | MS.gene029871:intron | 25.0% |
| !!! | CTTATTTTATTCAGTAGGTT+TGG | + | chr1.4:53717818-53717837 | MS.gene029871:intron | 25.0% |
| !!! | TTGCTCTTATTTTATTCAGT+AGG | + | chr1.4:53717813-53717832 | MS.gene029871:intron | 25.0% |
| AACAAATAGGGTACAAGAAT+TGG | + | chr1.4:53718866-53718885 | MS.gene029871:CDS | 30.0% | |
| AACTGAAAATGCAACTTGAA+AGG | + | chr1.4:53719201-53719220 | MS.gene029871:CDS | 30.0% | |
| AAGACAAGCTGAATTATATG+AGG | + | chr1.4:53719781-53719800 | MS.gene029871:CDS | 30.0% | |
| ACTCCTTGTAAGTCATATTT+CGG | + | chr1.4:53717937-53717956 | MS.gene029871:intron | 30.0% | |
| ACTGAAAATGCAACTTGAAA+GGG | + | chr1.4:53719202-53719221 | MS.gene029871:CDS | 30.0% | |
| AGAACTAAGGAAAATTTCTC+AGG | + | chr1.4:53719082-53719101 | MS.gene029871:CDS | 30.0% | |
| AGAGAACAATACACTTAAGA+TGG | + | chr1.4:53719943-53719962 | MS.gene029871:CDS | 30.0% | |
| ATCTACACAAGAAGAGTTAT+AGG | - | chr1.4:53718280-53718299 | None:intergenic | 30.0% | |
| ATTTGAAGGAGATTTCTTTC+GGG | - | chr1.4:53718482-53718501 | None:intergenic | 30.0% | |
| GATTTGAAGGAGATTTCTTT+CGG | - | chr1.4:53718483-53718502 | None:intergenic | 30.0% | |
| GGCTACAACAATTCTATTAT+TGG | + | chr1.4:53720289-53720308 | MS.gene029871:CDS | 30.0% | |
| TAAGATGGAAATAAAGAGAG+AGG | + | chr1.4:53719958-53719977 | MS.gene029871:CDS | 30.0% | |
| TAGAGGCAATATATTCATGA+AGG | - | chr1.4:53718745-53718764 | None:intergenic | 30.0% | |
| TAGTACAACTCAAATGCAAT+TGG | + | chr1.4:53719385-53719404 | MS.gene029871:CDS | 30.0% | |
| TTACCACAATATGATTCATC+AGG | - | chr1.4:53718108-53718127 | None:intergenic | 30.0% | |
| TTACCGAAATATGACTTACA+AGG | - | chr1.4:53717943-53717962 | None:intergenic | 30.0% | |
| TTTGAGCCTATTTGTATTCA+TGG | + | chr1.4:53717896-53717915 | MS.gene029871:intron | 30.0% | |
| ! | AGCTTTTATCTTCAATGACT+CGG | - | chr1.4:53718952-53718971 | None:intergenic | 30.0% |
| ! | ATGCTGCAAAAGTATGAAAT+AGG | - | chr1.4:53717738-53717757 | None:intergenic | 30.0% |
| ! | ATTTCTTCTGGAAACAACAA+TGG | + | chr1.4:53720232-53720251 | MS.gene029871:CDS | 30.0% |
| ! | CATGTTGATTGAAATATGGT+TGG | + | chr1.4:53718426-53718445 | MS.gene029871:intron | 30.0% |
| ! | CATTCTATTTAATGGACCAA+AGG | - | chr1.4:53718034-53718053 | None:intergenic | 30.0% |
| !! | ATATTTCTGGGATCTAATTG+AGG | + | chr1.4:53717997-53718016 | MS.gene029871:intron | 30.0% |
| !! | CTTTAGAGTTAGAGAAATCA+AGG | + | chr1.4:53719480-53719499 | MS.gene029871:CDS | 30.0% |
| !! | GGATTGTCTTGTTTCTTTAT+TGG | + | chr1.4:53718253-53718272 | MS.gene029871:intron | 30.0% |
| !! | TTAGATTTTGCTATGCATAG+AGG | - | chr1.4:53718762-53718781 | None:intergenic | 30.0% |
| !! | TTTCTCTAACTCTAAAGCTA+AGG | - | chr1.4:53719477-53719496 | None:intergenic | 30.0% |
| !! | TTTGTGTTGACTTGACATTT+GGG | - | chr1.4:53718600-53718619 | None:intergenic | 30.0% |
| !!! | CTTTTGGAGTTTTATTTGCT+GGG | - | chr1.4:53718570-53718589 | None:intergenic | 30.0% |
| !!! | TCTTTTGGAGTTTTATTTGC+TGG | - | chr1.4:53718571-53718590 | None:intergenic | 30.0% |
| AACACAAAGTCCAATATCTG+AGG | + | chr1.4:53718612-53718631 | MS.gene029871:CDS | 35.0% | |
| AATAATCACAATGGCACCAA+AGG | - | chr1.4:53718664-53718683 | None:intergenic | 35.0% | |
| AATTCGCTCATCTTCAGAAT+TGG | - | chr1.4:53719060-53719079 | None:intergenic | 35.0% | |
| AGAAATCTCCTTCAAATCCT+CGG | + | chr1.4:53718485-53718504 | MS.gene029871:CDS | 35.0% | |
| AGAGGTAGACAAAAATGTCA+AGG | - | chr1.4:53718836-53718855 | None:intergenic | 35.0% | |
| ATGAGCGAATTCAAGAACTA+AGG | + | chr1.4:53719069-53719088 | MS.gene029871:CDS | 35.0% | |
| CTAGAAGAACGGAACAAATA+GGG | + | chr1.4:53718854-53718873 | MS.gene029871:intron | 35.0% | |
| GAAGAATAAAATCACGGATG+AGG | + | chr1.4:53719988-53720007 | MS.gene029871:CDS | 35.0% | |
| GAAGATAAAAGCTCAACATG+AGG | + | chr1.4:53718959-53718978 | MS.gene029871:CDS | 35.0% | |
| GGAAAAATTATGGAGAGAAC+TGG | + | chr1.4:53720253-53720272 | MS.gene029871:CDS | 35.0% | |
| GTGATTCAGATTCTCTACAA+TGG | - | chr1.4:53719349-53719368 | None:intergenic | 35.0% | |
| GTTCCTATAAGACTTACCTT+TGG | + | chr1.4:53718645-53718664 | MS.gene029871:intron | 35.0% | |
| TATTTGTTCCGTTCTTCTAG+AGG | - | chr1.4:53718854-53718873 | None:intergenic | 35.0% | |
| TCATCAGTTTCTTCTGCATA+AGG | - | chr1.4:53720331-53720350 | None:intergenic | 35.0% | |
| TCATTTGCAAGATAGTGATG+TGG | + | chr1.4:53719865-53719884 | MS.gene029871:CDS | 35.0% | |
| TCTAGAAGAACGGAACAAAT+AGG | + | chr1.4:53718853-53718872 | MS.gene029871:intron | 35.0% | |
| TGAAAGTTCAGTCAGATCAA+TGG | + | chr1.4:53720179-53720198 | MS.gene029871:CDS | 35.0% | |
| TGGTAATTTCATGGATGCAT+TGG | + | chr1.4:53718683-53718702 | MS.gene029871:intron | 35.0% | |
| TGTCCTGATGAATCATATTG+TGG | + | chr1.4:53718102-53718121 | MS.gene029871:intron | 35.0% | |
| TTCTAATCTGCAATGTGCTT+TGG | - | chr1.4:53719718-53719737 | None:intergenic | 35.0% | |
| TTGTAGAGAATCTGAATCAC+AGG | + | chr1.4:53719349-53719368 | MS.gene029871:CDS | 35.0% | |
| TTTATCCATGTCAAGAGAGT+TGG | + | chr1.4:53719004-53719023 | MS.gene029871:CDS | 35.0% | |
| TTTCAGTTAAAGCTGAAGCA+GGG | + | chr1.4:53719639-53719658 | MS.gene029871:CDS | 35.0% | |
| TTTGAAGGAGATTTCTTTCG+GGG | - | chr1.4:53718481-53718500 | None:intergenic | 35.0% | |
| ! | AGCTTTAACTGAAACAAGCT+CGG | - | chr1.4:53719633-53719652 | None:intergenic | 35.0% |
| ! | CAAGTTGCATTTTCAGTTTC+TGG | - | chr1.4:53719199-53719218 | None:intergenic | 35.0% |
| ! | TGAGTTGAAGGCAAGATTAT+TGG | + | chr1.4:53719889-53719908 | MS.gene029871:CDS | 35.0% |
| ! | TTATTTGCTGGGTTTGAAGA+CGG | - | chr1.4:53718559-53718578 | None:intergenic | 35.0% |
| ! | TTTGTCTACCTCTAGAAGAA+CGG | + | chr1.4:53718843-53718862 | MS.gene029871:intron | 35.0% |
| !! | CTAACTCTAAAGCTAAGGAT+TGG | - | chr1.4:53719472-53719491 | None:intergenic | 35.0% |
| !! | CTTTGTGTTGACTTGACATT+TGG | - | chr1.4:53718601-53718620 | None:intergenic | 35.0% |
| !! | GAAACGACAATATTTTGGGA+AGG | + | chr1.4:53718232-53718251 | MS.gene029871:intron | 35.0% |
| !! | TGAAGAAAATTGGAGTGTTG+TGG | + | chr1.4:53720383-53720402 | MS.gene029871:CDS | 35.0% |
| !! | TTTGGTGCCATTGTGATTAT+TGG | + | chr1.4:53718663-53718682 | MS.gene029871:intron | 35.0% |
| AAGCCGATGTTGAAGAGTTA+AGG | + | chr1.4:53719819-53719838 | MS.gene029871:CDS | 40.0% | |
| AAGGTCTCAAGTAAACTCAC+TGG | + | chr1.4:53719499-53719518 | MS.gene029871:CDS | 40.0% | |
| AAGTTCAGTCAGATCAATGG+AGG | + | chr1.4:53720182-53720201 | MS.gene029871:CDS | 40.0% | |
| AATGATAGCACGTGTAACTG+AGG | + | chr1.4:53720102-53720121 | MS.gene029871:CDS | 40.0% | |
| ACTAGGCTTCTATGCATCAA+TGG | + | chr1.4:53718156-53718175 | MS.gene029871:intron | 40.0% | |
| AGAATCTGAATCACAGGCAT+TGG | + | chr1.4:53719355-53719374 | MS.gene029871:CDS | 40.0% | |
| AGCCGATGTTGAAGAGTTAA+GGG | + | chr1.4:53719820-53719839 | MS.gene029871:CDS | 40.0% | |
| AGGCTGAAGATGCAAAGAAT+CGG | + | chr1.4:53718979-53718998 | MS.gene029871:CDS | 40.0% | |
| AGGGCAGTTAAAATCTGCAT+TGG | + | chr1.4:53719658-53719677 | MS.gene029871:CDS | 40.0% | |
| ATGCTGAGATTCAAGACTTG+AGG | + | chr1.4:53719270-53719289 | MS.gene029871:CDS | 40.0% | |
| ATTGGAAGTTGTAGAAAGCG+AGG | + | chr1.4:53719589-53719608 | MS.gene029871:CDS | 40.0% | |
| CAGACACAAAAAGCAAGGTA+AGG | + | chr1.4:53717708-53717727 | MS.gene029871:intron | 40.0% | |
| CAGTTACACGTGCTATCATT+CGG | - | chr1.4:53720102-53720121 | None:intergenic | 40.0% | |
| CTCGTTCTGATATCTTACCT+CGG | - | chr1.4:53719690-53719709 | None:intergenic | 40.0% | |
| CTTTCTACAACTTCCAATGC+AGG | - | chr1.4:53719587-53719606 | None:intergenic | 40.0% | |
| GTTTCAGTTAAAGCTGAAGC+AGG | + | chr1.4:53719638-53719657 | MS.gene029871:CDS | 40.0% | |
| TAGAAAGCGAGGAGATAAAC+CGG | + | chr1.4:53719600-53719619 | MS.gene029871:CDS | 40.0% | |
| TGAGATTCAAGACTTGAGGA+TGG | + | chr1.4:53719274-53719293 | MS.gene029871:CDS | 40.0% | |
| TGAGGTATGAATGCTACCTT+TGG | + | chr1.4:53718015-53718034 | MS.gene029871:intron | 40.0% | |
| TGCCCTTAACTCTTCAACAT+CGG | - | chr1.4:53719825-53719844 | None:intergenic | 40.0% | |
| TGTCCAGAAACAGCATTCAA+TGG | + | chr1.4:53719139-53719158 | MS.gene029871:CDS | 40.0% | |
| ! | ACATTTGGGCTCCTATCTTT+TGG | - | chr1.4:53718586-53718605 | None:intergenic | 40.0% |
| ! | ACGCTTTTGCACCTTCTAAT+CGG | - | chr1.4:53719439-53719458 | None:intergenic | 40.0% |
| ! | AGAGTTAAGGGCACAATTGA+TGG | + | chr1.4:53719832-53719851 | MS.gene029871:CDS | 40.0% |
| ! | GCACCAAAGGTAAGTCTTAT+AGG | - | chr1.4:53718651-53718670 | None:intergenic | 40.0% |
| !! | AGTCCATTGAATGCTGTTTC+TGG | - | chr1.4:53719145-53719164 | None:intergenic | 40.0% |
| ACGACTGGAGAACACGAAAT+CGG | + | chr1.4:53719748-53719767 | MS.gene029871:CDS | 45.0% | |
| ACTTGTGAGCAAACTTCAGG+AGG | + | chr1.4:53719526-53719545 | MS.gene029871:CDS | 45.0% | |
| AGAATGGCAGTCTGAACTAG+AGG | + | chr1.4:53719115-53719134 | MS.gene029871:CDS | 45.0% | |
| ATCCATGTCAAGAGAGTTGG+AGG | + | chr1.4:53719007-53719026 | MS.gene029871:CDS | 45.0% | |
| ATTGTCAATCCGGGTAGCTT+CGG | - | chr1.4:53719237-53719256 | None:intergenic | 45.0% | |
| GAGCAAACTTCAGGAGGATT+TGG | + | chr1.4:53719532-53719551 | MS.gene029871:CDS | 45.0% | |
| GCTGCTGCTATGATTTCTTC+TGG | + | chr1.4:53720220-53720239 | MS.gene029871:CDS | 45.0% | |
| GGAACTTGTGAGCAAACTTC+AGG | + | chr1.4:53719523-53719542 | MS.gene029871:CDS | 45.0% | |
| GGAAGCTGCAAATAAGACAG+TGG | + | chr1.4:53719406-53719425 | MS.gene029871:CDS | 45.0% | |
| GGGTACAAGAATTGGAGTCT+CGG | + | chr1.4:53718874-53718893 | MS.gene029871:CDS | 45.0% | |
| GTCTCAAGTAAACTCACTGG+AGG | + | chr1.4:53719502-53719521 | MS.gene029871:CDS | 45.0% | |
| TGGAGCTAGAGGCTGAATTA+AGG | + | chr1.4:53720152-53720171 | MS.gene029871:CDS | 45.0% | |
| TTCCTCCAACTCTCTTGACA+TGG | - | chr1.4:53719012-53719031 | None:intergenic | 45.0% | |
| ! | AGAACTGGTTCACTTGACAG+TGG | + | chr1.4:53720268-53720287 | MS.gene029871:CDS | 45.0% |
| ! | TAGTGATGTGGCTGAGTTGA+AGG | + | chr1.4:53719877-53719896 | MS.gene029871:CDS | 45.0% |
| !! | TAGAAGTGCCTTTGAACGAC+TGG | + | chr1.4:53719733-53719752 | MS.gene029871:CDS | 45.0% |
| ACTTCCAATGCAGGTAAGCG+AGG | - | chr1.4:53719578-53719597 | None:intergenic | 50.0% | |
| ATCTCCTCGCTTACCTGCAT+TGG | + | chr1.4:53719571-53719590 | MS.gene029871:CDS | 50.0% | |
| CAGACTGCCATTCTCGATCT+CGG | - | chr1.4:53719109-53719128 | None:intergenic | 50.0% | |
| CCGACTCAGCATTGTCAATC+CGG | - | chr1.4:53719247-53719266 | None:intergenic | 50.0% | |
| CCGGATTGACAATGCTGAGT+CGG | + | chr1.4:53719244-53719263 | MS.gene029871:CDS | 50.0% | |
| CGACTCAGCATTGTCAATCC+GGG | - | chr1.4:53719246-53719265 | None:intergenic | 50.0% | |
| CGTGTTCTCCAGTCGTTCAA+AGG | - | chr1.4:53719744-53719763 | None:intergenic | 50.0% | |
| GAGAGTTGGAGGAATCACAG+CGG | + | chr1.4:53719018-53719037 | MS.gene029871:CDS | 50.0% | |
| GTGAGCAGAAATGGTGCATC+AGG | + | chr1.4:53718451-53718470 | MS.gene029871:intron | 50.0% | |
| GTGGAAACGCTCCGATTAGA+AGG | + | chr1.4:53719425-53719444 | MS.gene029871:CDS | 50.0% | |
| TGAGGAGTTAGATGCTGCAC+AGG | + | chr1.4:53720120-53720139 | MS.gene029871:CDS | 50.0% | |
| ! | CTTCAGGAGGATTTGGTCAG+TGG | + | chr1.4:53719539-53719558 | MS.gene029871:CDS | 50.0% |
| ! | GAGGATTTGGTCAGTGGAGT+TGG | + | chr1.4:53719545-53719564 | MS.gene029871:CDS | 50.0% |
| ! | TGGTTGGCTGTGAGCAGAAA+TGG | + | chr1.4:53718442-53718461 | MS.gene029871:intron | 50.0% |
| !! | AAACAAGCTCGGCTTTGAGC+CGG | - | chr1.4:53719622-53719641 | None:intergenic | 50.0% |
| ATCTGCATTGGATGCTGCCG+AGG | + | chr1.4:53719670-53719689 | MS.gene029871:CDS | 55.0% | |
| CACGTGAATCCGAAGCTACC+CGG | + | chr1.4:53719225-53719244 | MS.gene029871:CDS | 55.0% | |
| CGAGCAGTCCGAGGATTTGA+AGG | - | chr1.4:53718496-53718515 | None:intergenic | 55.0% | |
| CTCAGGACCGAGATCGAGAA+TGG | + | chr1.4:53719099-53719118 | MS.gene029871:CDS | 55.0% | |
| GCTCGCAAGACGAAGTCATC+AGG | + | chr1.4:53718511-53718530 | MS.gene029871:CDS | 55.0% | |
| GGAATCACAGCGGCAACTTC+TGG | + | chr1.4:53719028-53719047 | MS.gene029871:CDS | 55.0% | |
| TGGGTTTGAAGACGGCGAAG+CGG | - | chr1.4:53718551-53718570 | None:intergenic | 55.0% | |
| TGTCAAAGCCTCTCGCTCTG+CGG | - | chr1.4:53720041-53720060 | None:intergenic | 55.0% | |
| ! | GGCGTCGAATTTGGAGCTAG+AGG | + | chr1.4:53720141-53720160 | MS.gene029871:CDS | 55.0% |
| !! | TGCTGCACAGGCGTCGAATT+TGG | + | chr1.4:53720132-53720151 | MS.gene029871:CDS | 55.0% |
| TGCTTCCGCTGAGGCAGCAA+GGG | + | chr1.4:53720015-53720034 | MS.gene029871:CDS | 60.0% | |
| TTCGTCTTGCGAGCAGTCCG+AGG | - | chr1.4:53718505-53718524 | None:intergenic | 60.0% | |
| TTGCTTCCGCTGAGGCAGCA+AGG | + | chr1.4:53720014-53720033 | MS.gene029871:CDS | 60.0% | |
| ! | TGAGGCTGTTGCTTCCGCTG+AGG | + | chr1.4:53720006-53720025 | MS.gene029871:CDS | 60.0% |
| AGCAAGGGCCGCAGAGCGAG+AGG | + | chr1.4:53720030-53720049 | MS.gene029871:CDS | 70.0% | |
| TGCGGCCCTTGCTGCCTCAG+CGG | - | chr1.4:53720023-53720042 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 53717705 | 53720423 | 53717705 | ID=MS.gene029871 |
| chr1.4 | mRNA | 53717705 | 53720423 | 53717705 | ID=MS.gene029871.t1;Parent=MS.gene029871 |
| chr1.4 | exon | 53717705 | 53717724 | 53717705 | ID=MS.gene029871.t1.exon1;Parent=MS.gene029871.t1 |
| chr1.4 | CDS | 53717705 | 53717724 | 53717705 | ID=cds.MS.gene029871.t1;Parent=MS.gene029871.t1 |
| chr1.4 | exon | 53718459 | 53718633 | 53718459 | ID=MS.gene029871.t1.exon2;Parent=MS.gene029871.t1 |
| chr1.4 | CDS | 53718459 | 53718633 | 53718459 | ID=cds.MS.gene029871.t1;Parent=MS.gene029871.t1 |
| chr1.4 | exon | 53718858 | 53720423 | 53718858 | ID=MS.gene029871.t1.exon3;Parent=MS.gene029871.t1 |
| chr1.4 | CDS | 53718858 | 53720423 | 53718858 | ID=cds.MS.gene029871.t1;Parent=MS.gene029871.t1 |
| Gene Sequence |
| Protein sequence |
