Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20252.t1 | XP_003611657.2 | 89.7 | 613 | 45 | 1 | 1 | 613 | 1 | 595 | 1.50E-204 | 722.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20252.t1 | Q9FN19 | 61.7 | 632 | 204 | 3 | 1 | 613 | 1 | 613 | 1.3e-132 | 474.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20252.t1 | G7K578 | 89.7 | 613 | 45 | 1 | 1 | 613 | 1 | 595 | 1.1e-204 | 722.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene20252 | 0.806294 | 8.82E-50 | -1.69E-46 |
| MS.gene049159 | MS.gene20252 | 0.801348 | 9.40E-49 | -1.69E-46 |
| MS.gene049254 | MS.gene20252 | 0.83512 | 2.02E-56 | -1.69E-46 |
| MS.gene049343 | MS.gene20252 | 0.812487 | 4.14E-51 | -1.69E-46 |
| MS.gene049501 | MS.gene20252 | 0.827515 | 1.50E-54 | -1.69E-46 |
| MS.gene050026 | MS.gene20252 | 0.808319 | 3.28E-50 | -1.69E-46 |
| MS.gene050799 | MS.gene20252 | 0.810027 | 1.41E-50 | -1.69E-46 |
| MS.gene051198 | MS.gene20252 | 0.815764 | 7.82E-52 | -1.69E-46 |
| MS.gene051744 | MS.gene20252 | 0.843659 | 1.22E-58 | -1.69E-46 |
| MS.gene052519 | MS.gene20252 | 0.811624 | 6.38E-51 | -1.69E-46 |
| MS.gene052582 | MS.gene20252 | 0.832953 | 7.04E-56 | -1.69E-46 |
| MS.gene052584 | MS.gene20252 | 0.841299 | 5.17E-58 | -1.69E-46 |
| MS.gene052863 | MS.gene20252 | 0.80846 | 3.06E-50 | -1.69E-46 |
| MS.gene052896 | MS.gene20252 | 0.814617 | 1.41E-51 | -1.69E-46 |
| MS.gene053079 | MS.gene20252 | 0.821561 | 3.78E-53 | -1.69E-46 |
| MS.gene053226 | MS.gene20252 | 0.811331 | 7.39E-51 | -1.69E-46 |
| MS.gene05350 | MS.gene20252 | 0.809706 | 1.66E-50 | -1.69E-46 |
| MS.gene05415 | MS.gene20252 | 0.8102 | 1.30E-50 | -1.69E-46 |
| MS.gene05423 | MS.gene20252 | 0.841787 | 3.85E-58 | -1.69E-46 |
| MS.gene054291 | MS.gene20252 | -0.820746 | 5.83E-53 | -1.69E-46 |
| MS.gene054651 | MS.gene20252 | 0.830862 | 2.31E-55 | -1.69E-46 |
| MS.gene054775 | MS.gene20252 | 0.800537 | 1.38E-48 | -1.69E-46 |
| MS.gene054991 | MS.gene20252 | 0.806295 | 8.82E-50 | -1.69E-46 |
| MS.gene055466 | MS.gene20252 | 0.803597 | 3.23E-49 | -1.69E-46 |
| MS.gene055513 | MS.gene20252 | 0.835297 | 1.82E-56 | -1.69E-46 |
| MS.gene055586 | MS.gene20252 | 0.828536 | 8.51E-55 | -1.69E-46 |
| MS.gene055778 | MS.gene20252 | 0.802294 | 6.01E-49 | -1.69E-46 |
| MS.gene055818 | MS.gene20252 | 0.81934 | 1.22E-52 | -1.69E-46 |
| MS.gene055841 | MS.gene20252 | 0.804277 | 2.33E-49 | -1.69E-46 |
| MS.gene056366 | MS.gene20252 | 0.807247 | 5.55E-50 | -1.69E-46 |
| MS.gene05690 | MS.gene20252 | 0.81732 | 3.50E-52 | -1.69E-46 |
| MS.gene057026 | MS.gene20252 | 0.81933 | 1.23E-52 | -1.69E-46 |
| MS.gene057444 | MS.gene20252 | 0.8019 | 7.24E-49 | -1.69E-46 |
| MS.gene057598 | MS.gene20252 | 0.822622 | 2.15E-53 | -1.69E-46 |
| MS.gene058010 | MS.gene20252 | 0.801233 | 9.92E-49 | -1.69E-46 |
| MS.gene058625 | MS.gene20252 | 0.815405 | 9.40E-52 | -1.69E-46 |
| MS.gene058979 | MS.gene20252 | 0.826632 | 2.44E-54 | -1.69E-46 |
| MS.gene059570 | MS.gene20252 | 0.805102 | 1.57E-49 | -1.69E-46 |
| MS.gene059625 | MS.gene20252 | 0.83533 | 1.79E-56 | -1.69E-46 |
| MS.gene060134 | MS.gene20252 | 0.804575 | 2.02E-49 | -1.69E-46 |
| MS.gene060373 | MS.gene20252 | 0.803953 | 2.73E-49 | -1.69E-46 |
| MS.gene06052 | MS.gene20252 | 0.825655 | 4.16E-54 | -1.69E-46 |
| MS.gene060572 | MS.gene20252 | 0.804217 | 2.40E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene20252 | MS.gene058245 | PPI |
| MS.gene067232 | MS.gene20252 | PPI |
| MS.gene009372 | MS.gene20252 | PPI |
| MS.gene51515 | MS.gene20252 | PPI |
| MS.gene20252 | MS.gene73873 | PPI |
| MS.gene031528 | MS.gene20252 | PPI |
| MS.gene066896 | MS.gene20252 | PPI |
| MS.gene69947 | MS.gene20252 | PPI |
| MS.gene00146 | MS.gene20252 | PPI |
| MS.gene031750 | MS.gene20252 | PPI |
| MS.gene065890 | MS.gene20252 | PPI |
| MS.gene55980 | MS.gene20252 | PPI |
| MS.gene67725 | MS.gene20252 | PPI |
| MS.gene43992 | MS.gene20252 | PPI |
| MS.gene006560 | MS.gene20252 | PPI |
| MS.gene006556 | MS.gene20252 | PPI |
| MS.gene065792 | MS.gene20252 | PPI |
| MS.gene20252 | MS.gene99805 | PPI |
| MS.gene96812 | MS.gene20252 | PPI |
| MS.gene031751 | MS.gene20252 | PPI |
| MS.gene87267 | MS.gene20252 | PPI |
| MS.gene005125 | MS.gene20252 | PPI |
| MS.gene20252 | MS.gene006768 | PPI |
| MS.gene67743 | MS.gene20252 | PPI |
| MS.gene20252 | MS.gene69797 | PPI |
| MS.gene006555 | MS.gene20252 | PPI |
| MS.gene065891 | MS.gene20252 | PPI |
| MS.gene36082 | MS.gene20252 | PPI |
| MS.gene031278 | MS.gene20252 | PPI |
| MS.gene006557 | MS.gene20252 | PPI |
| MS.gene42782 | MS.gene20252 | PPI |
| MS.gene56557 | MS.gene20252 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20252.t1 | MTR_5g016370 | 92.333 | 613 | 29 | 1 | 1 | 613 | 1 | 595 | 0.0 | 1113 |
| MS.gene20252.t1 | MTR_5g016350 | 86.667 | 615 | 48 | 4 | 1 | 613 | 1 | 583 | 0.0 | 1028 |
| MS.gene20252.t1 | MTR_5g016350 | 85.348 | 546 | 46 | 4 | 70 | 613 | 6 | 519 | 0.0 | 885 |
| MS.gene20252.t1 | MTR_4g095058 | 70.569 | 615 | 142 | 5 | 1 | 613 | 1 | 578 | 0.0 | 884 |
| MS.gene20252.t1 | MTR_4g095058 | 70.244 | 615 | 142 | 6 | 1 | 613 | 1 | 576 | 0.0 | 874 |
| MS.gene20252.t1 | MTR_4g119620 | 25.634 | 355 | 222 | 11 | 220 | 569 | 5 | 322 | 2.51e-26 | 110 |
| MS.gene20252.t1 | MTR_4g119620 | 24.016 | 254 | 157 | 4 | 339 | 582 | 19 | 246 | 9.41e-18 | 85.1 |
| MS.gene20252.t1 | MTR_4g119620 | 25.106 | 235 | 147 | 5 | 238 | 462 | 111 | 326 | 2.27e-17 | 84.0 |
| MS.gene20252.t1 | MTR_1g054300 | 25.686 | 401 | 189 | 9 | 243 | 568 | 115 | 481 | 3.68e-25 | 109 |
| MS.gene20252.t1 | MTR_1g054300 | 31.868 | 182 | 99 | 5 | 403 | 583 | 134 | 291 | 4.13e-16 | 81.6 |
| MS.gene20252.t1 | MTR_3g106080 | 24.277 | 346 | 200 | 9 | 241 | 583 | 344 | 630 | 5.63e-24 | 107 |
| MS.gene20252.t1 | MTR_3g106080 | 26.154 | 260 | 173 | 4 | 237 | 494 | 409 | 651 | 1.75e-18 | 89.7 |
| MS.gene20252.t1 | MTR_3g106080 | 21.831 | 284 | 156 | 7 | 362 | 610 | 363 | 615 | 4.42e-14 | 75.9 |
| MS.gene20252.t1 | MTR_1g097140 | 25.613 | 367 | 183 | 12 | 240 | 582 | 73 | 373 | 7.17e-24 | 104 |
| MS.gene20252.t1 | MTR_1g097140 | 23.492 | 315 | 166 | 8 | 243 | 511 | 119 | 404 | 4.47e-14 | 75.1 |
| MS.gene20252.t1 | MTR_8g038550 | 26.074 | 349 | 223 | 9 | 266 | 606 | 140 | 461 | 5.44e-23 | 104 |
| MS.gene20252.t1 | MTR_8g038550 | 27.642 | 246 | 149 | 6 | 242 | 458 | 220 | 465 | 8.62e-17 | 84.7 |
| MS.gene20252.t1 | MTR_8g038550 | 21.557 | 334 | 216 | 7 | 241 | 571 | 177 | 467 | 2.08e-13 | 73.9 |
| MS.gene20252.t1 | MTR_6g004040 | 28.523 | 298 | 167 | 11 | 320 | 608 | 31 | 291 | 5.86e-23 | 104 |
| MS.gene20252.t1 | MTR_6g004040 | 22.549 | 204 | 129 | 3 | 383 | 584 | 10 | 186 | 3.25e-15 | 79.7 |
| MS.gene20252.t1 | MTR_6g004040 | 25.654 | 191 | 113 | 4 | 423 | 611 | 9 | 172 | 8.96e-14 | 75.1 |
| MS.gene20252.t1 | MTR_2g012630 | 28.175 | 252 | 151 | 6 | 320 | 569 | 30 | 253 | 2.13e-20 | 96.7 |
| MS.gene20252.t1 | MTR_2g012630 | 23.529 | 204 | 127 | 4 | 383 | 584 | 9 | 185 | 1.73e-13 | 74.3 |
| MS.gene20252.t1 | MTR_2g012630 | 28.175 | 252 | 151 | 6 | 320 | 569 | 30 | 253 | 2.23e-20 | 96.3 |
| MS.gene20252.t1 | MTR_2g012630 | 23.529 | 204 | 127 | 4 | 383 | 584 | 9 | 185 | 1.96e-13 | 74.3 |
| MS.gene20252.t1 | MTR_7g076230 | 23.776 | 286 | 187 | 5 | 308 | 579 | 371 | 639 | 2.14e-19 | 93.2 |
| MS.gene20252.t1 | MTR_7g076230 | 26.500 | 200 | 109 | 6 | 428 | 599 | 367 | 556 | 3.49e-14 | 76.6 |
| MS.gene20252.t1 | MTR_5g022690 | 23.123 | 333 | 214 | 6 | 245 | 569 | 178 | 476 | 2.69e-19 | 91.7 |
| MS.gene20252.t1 | MTR_5g022690 | 25.112 | 223 | 139 | 5 | 243 | 458 | 275 | 476 | 2.96e-13 | 72.8 |
| MS.gene20252.t1 | MTR_5g022690 | 26.519 | 181 | 102 | 6 | 442 | 612 | 192 | 351 | 8.45e-11 | 65.1 |
| MS.gene20252.t1 | MTR_1g072140 | 25.449 | 334 | 197 | 11 | 243 | 568 | 23 | 312 | 3.66e-19 | 89.4 |
| MS.gene20252.t1 | MTR_1g072140 | 23.554 | 242 | 158 | 4 | 342 | 582 | 22 | 237 | 5.21e-19 | 88.6 |
| MS.gene20252.t1 | MTR_1g072140 | 26.754 | 228 | 138 | 7 | 240 | 457 | 104 | 312 | 3.51e-15 | 77.4 |
| MS.gene20252.t1 | MTR_7g086360 | 26.239 | 343 | 196 | 12 | 237 | 567 | 45 | 342 | 2.78e-18 | 87.0 |
| MS.gene20252.t1 | MTR_7g086360 | 22.667 | 300 | 186 | 8 | 343 | 606 | 51 | 340 | 5.19e-17 | 83.2 |
| MS.gene20252.t1 | MTR_7g086360 | 25.571 | 219 | 126 | 6 | 421 | 612 | 46 | 254 | 3.74e-12 | 68.6 |
| MS.gene20252.t1 | MTR_7g104550 | 28.339 | 307 | 155 | 11 | 239 | 507 | 8 | 287 | 7.04e-18 | 85.9 |
| MS.gene20252.t1 | MTR_7g104550 | 24.028 | 283 | 126 | 10 | 309 | 568 | 19 | 235 | 7.05e-14 | 73.6 |
| MS.gene20252.t1 | MTR_7g104550 | 26.482 | 253 | 137 | 9 | 240 | 459 | 106 | 342 | 6.47e-13 | 70.9 |
| MS.gene20252.t1 | MTR_3g045130 | 29.101 | 189 | 125 | 2 | 321 | 508 | 330 | 510 | 8.59e-18 | 87.4 |
| MS.gene20252.t1 | MTR_3g045130 | 23.293 | 249 | 143 | 6 | 349 | 586 | 274 | 485 | 3.34e-14 | 75.9 |
| MS.gene20252.t1 | MTR_4g125710 | 26.688 | 311 | 187 | 10 | 220 | 509 | 29 | 319 | 2.84e-17 | 83.6 |
| MS.gene20252.t1 | MTR_4g125710 | 21.615 | 384 | 217 | 14 | 241 | 611 | 8 | 320 | 7.10e-13 | 70.5 |
| MS.gene20252.t1 | MTR_7g451830 | 23.762 | 303 | 150 | 9 | 301 | 570 | 160 | 414 | 1.26e-16 | 83.2 |
| MS.gene20252.t1 | MTR_7g047640 | 23.762 | 303 | 150 | 9 | 301 | 570 | 160 | 414 | 1.26e-16 | 83.2 |
| MS.gene20252.t1 | MTR_3g061450 | 26.786 | 280 | 174 | 8 | 245 | 519 | 17 | 270 | 4.61e-16 | 80.1 |
| MS.gene20252.t1 | MTR_3g061450 | 26.020 | 196 | 106 | 5 | 424 | 611 | 13 | 177 | 2.64e-12 | 68.6 |
| MS.gene20252.t1 | MTR_1g050340 | 25.939 | 293 | 175 | 10 | 304 | 568 | 508 | 786 | 1.17e-15 | 81.3 |
| MS.gene20252.t1 | MTR_1g050340 | 25.939 | 293 | 175 | 10 | 304 | 568 | 507 | 785 | 1.26e-15 | 80.9 |
| MS.gene20252.t1 | MTR_7g106870 | 23.232 | 297 | 185 | 8 | 309 | 570 | 142 | 430 | 1.45e-15 | 80.1 |
| MS.gene20252.t1 | MTR_8g106790 | 28.750 | 240 | 138 | 8 | 360 | 591 | 29 | 243 | 2.54e-15 | 77.8 |
| MS.gene20252.t1 | MTR_8g106790 | 24.535 | 269 | 163 | 8 | 320 | 577 | 30 | 269 | 7.10e-14 | 73.6 |
| MS.gene20252.t1 | MTR_7g034625 | 24.354 | 271 | 164 | 7 | 334 | 570 | 56 | 319 | 2.70e-15 | 77.8 |
| MS.gene20252.t1 | MTR_4g123597 | 33.793 | 145 | 94 | 2 | 320 | 462 | 78 | 222 | 3.70e-15 | 79.7 |
| MS.gene20252.t1 | MTR_4g096880 | 28.796 | 191 | 112 | 8 | 334 | 510 | 167 | 347 | 4.03e-15 | 78.2 |
| MS.gene20252.t1 | MTR_3g116500 | 23.288 | 365 | 214 | 14 | 232 | 570 | 47 | 371 | 5.64e-15 | 77.4 |
| MS.gene20252.t1 | MTR_4g102520 | 23.543 | 429 | 273 | 13 | 127 | 526 | 157 | 559 | 8.78e-15 | 78.2 |
| MS.gene20252.t1 | MTR_2g060710 | 25.000 | 304 | 180 | 11 | 305 | 570 | 133 | 426 | 1.41e-14 | 76.6 |
| MS.gene20252.t1 | MTR_2g086140 | 24.294 | 354 | 214 | 11 | 309 | 611 | 16 | 366 | 1.52e-14 | 77.8 |
| MS.gene20252.t1 | MTR_3g067940 | 23.973 | 292 | 175 | 11 | 312 | 570 | 178 | 455 | 1.67e-14 | 76.6 |
| MS.gene20252.t1 | MTR_3g107910 | 23.121 | 346 | 196 | 13 | 235 | 568 | 616 | 903 | 1.87e-14 | 77.4 |
| MS.gene20252.t1 | MTR_2g059200 | 23.567 | 314 | 199 | 8 | 235 | 536 | 50 | 334 | 1.98e-14 | 77.4 |
| MS.gene20252.t1 | MTR_3g107910 | 23.121 | 346 | 196 | 13 | 235 | 568 | 609 | 896 | 2.17e-14 | 77.0 |
| MS.gene20252.t1 | MTR_4g104380 | 24.834 | 302 | 182 | 8 | 340 | 608 | 223 | 512 | 2.32e-14 | 76.3 |
| MS.gene20252.t1 | MTR_4g053675 | 23.743 | 358 | 215 | 9 | 309 | 611 | 16 | 370 | 2.66e-14 | 77.0 |
| MS.gene20252.t1 | MTR_5g008010 | 23.288 | 292 | 181 | 10 | 312 | 568 | 143 | 426 | 2.93e-14 | 75.9 |
| MS.gene20252.t1 | MTR_3g449990 | 23.706 | 367 | 211 | 13 | 234 | 582 | 257 | 572 | 3.03e-14 | 76.3 |
| MS.gene20252.t1 | MTR_1g072740 | 24.031 | 387 | 246 | 12 | 129 | 484 | 156 | 525 | 5.94e-14 | 75.5 |
| MS.gene20252.t1 | MTR_2g436510 | 24.121 | 199 | 139 | 3 | 332 | 528 | 155 | 343 | 9.79e-14 | 74.3 |
| MS.gene20252.t1 | MTR_2g436510 | 20.917 | 349 | 237 | 7 | 236 | 582 | 159 | 470 | 7.54e-13 | 71.6 |
| MS.gene20252.t1 | MTR_3g116500 | 25.000 | 284 | 165 | 13 | 311 | 570 | 2 | 261 | 1.87e-13 | 71.2 |
| MS.gene20252.t1 | MTR_3g051690 | 23.208 | 293 | 181 | 10 | 312 | 568 | 147 | 431 | 5.27e-13 | 72.0 |
| MS.gene20252.t1 | MTR_2g016160 | 27.094 | 203 | 109 | 9 | 420 | 613 | 97 | 269 | 6.90e-13 | 70.5 |
| MS.gene20252.t1 | MTR_3g052220 | 26.255 | 259 | 153 | 8 | 354 | 602 | 221 | 451 | 9.14e-13 | 71.2 |
| MS.gene20252.t1 | MTR_2g029940 | 25.862 | 232 | 163 | 5 | 243 | 469 | 145 | 372 | 1.10e-12 | 71.2 |
| MS.gene20252.t1 | MTR_2g016690 | 23.599 | 339 | 195 | 12 | 261 | 582 | 22 | 313 | 1.36e-12 | 69.7 |
| MS.gene20252.t1 | MTR_3g075400 | 23.841 | 302 | 185 | 8 | 340 | 608 | 218 | 507 | 2.66e-12 | 69.7 |
| MS.gene20252.t1 | MTR_5g085250 | 21.902 | 347 | 215 | 13 | 290 | 609 | 219 | 536 | 4.83e-12 | 69.3 |
| MS.gene20252.t1 | MTR_7g053100 | 23.874 | 222 | 151 | 5 | 309 | 520 | 123 | 336 | 5.56e-12 | 68.6 |
| MS.gene20252.t1 | MTR_5g085250 | 21.902 | 347 | 215 | 13 | 290 | 609 | 356 | 673 | 5.67e-12 | 69.3 |
| MS.gene20252.t1 | MTR_5g090420 | 24.857 | 350 | 200 | 12 | 235 | 571 | 252 | 551 | 5.76e-12 | 68.9 |
| MS.gene20252.t1 | MTR_1g069345 | 24.444 | 315 | 192 | 10 | 234 | 512 | 203 | 507 | 5.86e-12 | 68.9 |
| MS.gene20252.t1 | MTR_5g085250 | 21.902 | 347 | 215 | 13 | 290 | 609 | 252 | 569 | 6.93e-12 | 68.6 |
| MS.gene20252.t1 | MTR_2g014020 | 25.000 | 252 | 148 | 10 | 343 | 589 | 244 | 459 | 1.41e-11 | 67.8 |
| MS.gene20252.t1 | MTR_4g105700 | 25.728 | 206 | 123 | 4 | 405 | 604 | 77 | 258 | 1.42e-11 | 68.2 |
| MS.gene20252.t1 | MTR_4g105700 | 23.864 | 264 | 157 | 8 | 320 | 568 | 419 | 653 | 5.10e-11 | 66.2 |
| MS.gene20252.t1 | MTR_4g105700 | 21.739 | 299 | 180 | 9 | 229 | 508 | 390 | 653 | 7.65e-11 | 65.9 |
| MS.gene20252.t1 | MTR_7g057540 | 22.635 | 296 | 183 | 10 | 312 | 570 | 118 | 404 | 1.75e-11 | 67.0 |
| MS.gene20252.t1 | MTR_4g102510 | 20.732 | 246 | 164 | 3 | 350 | 570 | 212 | 451 | 1.77e-11 | 67.0 |
| MS.gene20252.t1 | MTR_7g099170 | 26.354 | 277 | 153 | 11 | 242 | 480 | 176 | 439 | 2.33e-11 | 66.6 |
| MS.gene20252.t1 | MTR_8g092620 | 21.488 | 242 | 160 | 4 | 342 | 582 | 13 | 225 | 2.38e-11 | 65.5 |
| MS.gene20252.t1 | MTR_7g099170 | 26.354 | 277 | 153 | 11 | 242 | 480 | 148 | 411 | 2.99e-11 | 66.2 |
| MS.gene20252.t1 | MTR_7g055590 | 22.635 | 296 | 183 | 10 | 312 | 570 | 118 | 404 | 3.62e-11 | 66.2 |
| MS.gene20252.t1 | MTR_8g092620 | 21.488 | 242 | 160 | 4 | 342 | 582 | 20 | 232 | 4.06e-11 | 65.1 |
| MS.gene20252.t1 | MTR_4g071130 | 22.634 | 243 | 147 | 5 | 353 | 574 | 15 | 237 | 4.53e-11 | 66.6 |
| MS.gene20252.t1 | MTR_2g060520 | 21.739 | 299 | 166 | 10 | 235 | 521 | 114 | 356 | 4.62e-11 | 65.9 |
| MS.gene20252.t1 | MTR_2g087640 | 25.106 | 235 | 150 | 6 | 307 | 525 | 11 | 235 | 7.55e-11 | 64.3 |
| MS.gene20252.t1 | MTR_3g100060 | 21.223 | 278 | 171 | 7 | 310 | 586 | 2981 | 3211 | 7.94e-11 | 66.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20252.t1 | AT5G67320 | 61.392 | 632 | 206 | 6 | 1 | 613 | 1 | 613 | 0.0 | 754 |
| MS.gene20252.t1 | AT3G49660 | 26.364 | 330 | 204 | 10 | 243 | 569 | 20 | 313 | 9.58e-26 | 108 |
| MS.gene20252.t1 | AT3G49660 | 25.322 | 233 | 147 | 5 | 238 | 462 | 104 | 317 | 1.07e-19 | 90.9 |
| MS.gene20252.t1 | AT3G49660 | 22.672 | 247 | 159 | 4 | 342 | 582 | 19 | 239 | 3.04e-17 | 83.6 |
| MS.gene20252.t1 | AT3G49660 | 23.127 | 307 | 195 | 11 | 289 | 582 | 6 | 284 | 2.49e-16 | 80.9 |
| MS.gene20252.t1 | AT2G41500 | 22.247 | 445 | 287 | 10 | 141 | 569 | 135 | 536 | 3.55e-23 | 104 |
| MS.gene20252.t1 | AT2G41500 | 22.247 | 445 | 287 | 10 | 141 | 569 | 135 | 536 | 3.55e-23 | 104 |
| MS.gene20252.t1 | AT5G52820 | 24.557 | 395 | 222 | 11 | 243 | 599 | 105 | 461 | 1.61e-22 | 101 |
| MS.gene20252.t1 | AT5G52820 | 28.190 | 337 | 176 | 14 | 243 | 568 | 190 | 471 | 7.00e-22 | 99.8 |
| MS.gene20252.t1 | AT5G52820 | 21.739 | 345 | 180 | 10 | 342 | 612 | 104 | 432 | 1.38e-15 | 80.1 |
| MS.gene20252.t1 | AT2G26060 | 29.730 | 370 | 181 | 16 | 243 | 570 | 16 | 348 | 1.81e-22 | 99.8 |
| MS.gene20252.t1 | AT2G26060 | 26.190 | 252 | 140 | 9 | 240 | 459 | 111 | 348 | 1.97e-14 | 75.5 |
| MS.gene20252.t1 | AT2G26060 | 23.741 | 278 | 129 | 8 | 315 | 575 | 36 | 247 | 9.51e-12 | 67.4 |
| MS.gene20252.t1 | AT2G32700 | 26.225 | 347 | 199 | 13 | 227 | 568 | 511 | 805 | 2.44e-22 | 102 |
| MS.gene20252.t1 | AT2G32700 | 26.225 | 347 | 199 | 13 | 227 | 568 | 490 | 784 | 3.20e-22 | 102 |
| MS.gene20252.t1 | AT2G32700 | 26.225 | 347 | 199 | 13 | 227 | 568 | 492 | 786 | 3.41e-22 | 102 |
| MS.gene20252.t1 | AT2G32700 | 26.225 | 347 | 199 | 13 | 227 | 568 | 492 | 786 | 3.41e-22 | 102 |
| MS.gene20252.t1 | AT2G32700 | 26.225 | 347 | 199 | 13 | 227 | 568 | 492 | 786 | 3.41e-22 | 102 |
| MS.gene20252.t1 | AT2G32700 | 26.225 | 347 | 199 | 13 | 227 | 568 | 492 | 786 | 3.41e-22 | 102 |
| MS.gene20252.t1 | AT2G32700 | 26.225 | 347 | 199 | 13 | 227 | 568 | 492 | 786 | 3.41e-22 | 102 |
| MS.gene20252.t1 | AT2G26060 | 27.114 | 343 | 166 | 9 | 243 | 567 | 16 | 292 | 5.05e-22 | 98.2 |
| MS.gene20252.t1 | AT2G26060 | 23.741 | 278 | 129 | 8 | 315 | 575 | 36 | 247 | 7.47e-12 | 67.4 |
| MS.gene20252.t1 | AT5G25150 | 24.150 | 294 | 169 | 7 | 317 | 583 | 363 | 629 | 9.06e-22 | 100 |
| MS.gene20252.t1 | AT5G25150 | 25.830 | 271 | 133 | 6 | 241 | 510 | 412 | 615 | 6.94e-17 | 84.7 |
| MS.gene20252.t1 | AT5G25150 | 24.150 | 294 | 169 | 7 | 317 | 583 | 363 | 629 | 9.73e-22 | 100 |
| MS.gene20252.t1 | AT5G25150 | 25.455 | 275 | 137 | 6 | 237 | 510 | 408 | 615 | 6.16e-17 | 85.1 |
| MS.gene20252.t1 | AT5G13480 | 23.782 | 349 | 231 | 9 | 266 | 606 | 91 | 412 | 7.06e-20 | 94.4 |
| MS.gene20252.t1 | AT5G13480 | 27.347 | 245 | 149 | 5 | 242 | 457 | 171 | 415 | 1.59e-18 | 90.1 |
| MS.gene20252.t1 | AT5G13480 | 23.782 | 349 | 231 | 9 | 266 | 606 | 68 | 389 | 7.58e-20 | 94.0 |
| MS.gene20252.t1 | AT5G13480 | 27.347 | 245 | 149 | 5 | 242 | 457 | 148 | 392 | 2.35e-18 | 89.4 |
| MS.gene20252.t1 | AT5G13480 | 22.973 | 296 | 197 | 5 | 291 | 582 | 52 | 320 | 5.60e-15 | 78.6 |
| MS.gene20252.t1 | AT5G13480 | 23.782 | 349 | 231 | 9 | 266 | 606 | 68 | 389 | 9.17e-20 | 94.0 |
| MS.gene20252.t1 | AT5G13480 | 27.347 | 245 | 149 | 5 | 242 | 457 | 148 | 392 | 2.72e-18 | 89.4 |
| MS.gene20252.t1 | AT5G13480 | 22.973 | 296 | 197 | 5 | 291 | 582 | 52 | 320 | 6.24e-15 | 78.6 |
| MS.gene20252.t1 | AT5G13480 | 23.782 | 349 | 231 | 9 | 266 | 606 | 80 | 401 | 1.01e-19 | 94.0 |
| MS.gene20252.t1 | AT5G13480 | 27.347 | 245 | 149 | 5 | 242 | 457 | 160 | 404 | 2.93e-18 | 89.4 |
| MS.gene20252.t1 | AT5G13480 | 22.973 | 296 | 197 | 5 | 291 | 582 | 64 | 332 | 7.63e-15 | 78.6 |
| MS.gene20252.t1 | AT4G02730 | 24.138 | 348 | 217 | 10 | 227 | 568 | 23 | 329 | 2.85e-19 | 89.7 |
| MS.gene20252.t1 | AT4G02730 | 24.912 | 285 | 174 | 9 | 328 | 582 | 25 | 299 | 1.08e-17 | 85.1 |
| MS.gene20252.t1 | AT4G02730 | 28.492 | 179 | 99 | 4 | 423 | 599 | 36 | 187 | 6.16e-14 | 73.9 |
| MS.gene20252.t1 | AT4G02730 | 23.228 | 254 | 157 | 8 | 226 | 462 | 100 | 332 | 3.28e-11 | 65.5 |
| MS.gene20252.t1 | AT2G43770 | 26.347 | 334 | 197 | 14 | 211 | 522 | 7 | 313 | 2.18e-18 | 87.4 |
| MS.gene20252.t1 | AT2G43770 | 24.667 | 300 | 180 | 9 | 343 | 606 | 49 | 338 | 3.27e-17 | 84.0 |
| MS.gene20252.t1 | AT2G43770 | 24.490 | 245 | 150 | 8 | 242 | 451 | 91 | 335 | 5.64e-12 | 68.2 |
| MS.gene20252.t1 | AT2G43770 | 25.229 | 218 | 126 | 6 | 422 | 612 | 45 | 252 | 7.46e-12 | 67.8 |
| MS.gene20252.t1 | AT5G23430 | 26.174 | 298 | 174 | 11 | 320 | 608 | 31 | 291 | 2.60e-18 | 89.7 |
| MS.gene20252.t1 | AT5G23430 | 22.549 | 204 | 129 | 4 | 383 | 584 | 10 | 186 | 1.87e-14 | 77.4 |
| MS.gene20252.t1 | AT5G23430 | 26.174 | 298 | 174 | 11 | 320 | 608 | 31 | 291 | 2.60e-18 | 89.7 |
| MS.gene20252.t1 | AT5G23430 | 22.549 | 204 | 129 | 4 | 383 | 584 | 10 | 186 | 1.87e-14 | 77.4 |
| MS.gene20252.t1 | AT5G23430 | 26.174 | 298 | 174 | 11 | 320 | 608 | 31 | 291 | 2.61e-18 | 89.7 |
| MS.gene20252.t1 | AT5G23430 | 22.549 | 204 | 129 | 4 | 383 | 584 | 10 | 186 | 1.80e-14 | 77.4 |
| MS.gene20252.t1 | AT5G08390 | 28.218 | 202 | 132 | 4 | 320 | 518 | 31 | 222 | 3.51e-18 | 89.4 |
| MS.gene20252.t1 | AT5G08390 | 22.549 | 204 | 129 | 4 | 383 | 584 | 10 | 186 | 8.11e-15 | 78.6 |
| MS.gene20252.t1 | AT1G71840 | 24.129 | 373 | 187 | 10 | 240 | 582 | 63 | 369 | 1.45e-17 | 85.9 |
| MS.gene20252.t1 | AT5G56130 | 26.087 | 299 | 185 | 9 | 307 | 598 | 21 | 290 | 1.59e-17 | 84.3 |
| MS.gene20252.t1 | AT5G56130 | 24.555 | 281 | 181 | 9 | 244 | 519 | 17 | 271 | 2.04e-13 | 72.0 |
| MS.gene20252.t1 | AT1G11160 | 27.027 | 222 | 134 | 3 | 342 | 562 | 11 | 205 | 1.67e-17 | 87.4 |
| MS.gene20252.t1 | AT1G11160 | 23.922 | 255 | 164 | 5 | 346 | 597 | 14 | 241 | 4.10e-17 | 85.9 |
| MS.gene20252.t1 | AT1G11160 | 23.922 | 255 | 164 | 5 | 346 | 597 | 14 | 241 | 4.33e-17 | 85.9 |
| MS.gene20252.t1 | AT4G32990 | 26.849 | 365 | 182 | 14 | 239 | 570 | 12 | 324 | 4.44e-17 | 83.2 |
| MS.gene20252.t1 | AT4G32990 | 27.059 | 255 | 142 | 8 | 240 | 462 | 85 | 327 | 4.17e-16 | 80.5 |
| MS.gene20252.t1 | AT1G11160 | 23.922 | 255 | 164 | 5 | 346 | 597 | 14 | 241 | 5.28e-17 | 85.9 |
| MS.gene20252.t1 | AT1G15440 | 22.378 | 286 | 191 | 5 | 308 | 579 | 391 | 659 | 9.53e-17 | 84.7 |
| MS.gene20252.t1 | AT1G15440 | 26.000 | 200 | 110 | 6 | 428 | 599 | 387 | 576 | 6.19e-12 | 69.3 |
| MS.gene20252.t1 | AT1G15440 | 22.378 | 286 | 191 | 5 | 308 | 579 | 351 | 619 | 1.18e-16 | 84.3 |
| MS.gene20252.t1 | AT1G15440 | 26.000 | 200 | 110 | 6 | 428 | 599 | 347 | 536 | 6.50e-12 | 69.3 |
| MS.gene20252.t1 | AT1G61210 | 26.877 | 253 | 153 | 7 | 320 | 569 | 30 | 253 | 1.25e-16 | 84.7 |
| MS.gene20252.t1 | AT1G61210 | 24.603 | 252 | 160 | 5 | 346 | 594 | 14 | 238 | 3.86e-16 | 82.8 |
| MS.gene20252.t1 | AT1G61210 | 26.702 | 191 | 111 | 5 | 423 | 611 | 8 | 171 | 7.10e-13 | 72.4 |
| MS.gene20252.t1 | AT1G61210 | 26.877 | 253 | 153 | 7 | 320 | 569 | 30 | 253 | 1.94e-16 | 84.0 |
| MS.gene20252.t1 | AT1G61210 | 24.603 | 252 | 160 | 5 | 346 | 594 | 14 | 238 | 5.86e-16 | 82.4 |
| MS.gene20252.t1 | AT1G61210 | 26.702 | 191 | 111 | 5 | 423 | 611 | 8 | 171 | 7.58e-13 | 72.4 |
| MS.gene20252.t1 | AT1G61210 | 26.877 | 253 | 153 | 7 | 320 | 569 | 30 | 253 | 2.25e-16 | 84.0 |
| MS.gene20252.t1 | AT1G61210 | 24.603 | 252 | 160 | 5 | 346 | 594 | 14 | 238 | 6.85e-16 | 82.4 |
| MS.gene20252.t1 | AT1G61210 | 26.702 | 191 | 111 | 5 | 423 | 611 | 8 | 171 | 8.55e-13 | 72.4 |
| MS.gene20252.t1 | AT4G34460 | 22.989 | 348 | 210 | 10 | 243 | 570 | 56 | 365 | 2.29e-16 | 81.6 |
| MS.gene20252.t1 | AT4G34460 | 21.528 | 288 | 180 | 11 | 342 | 609 | 55 | 316 | 1.91e-12 | 69.7 |
| MS.gene20252.t1 | AT4G34460 | 22.989 | 348 | 210 | 10 | 243 | 570 | 61 | 370 | 2.66e-16 | 81.6 |
| MS.gene20252.t1 | AT4G34460 | 21.528 | 288 | 180 | 11 | 342 | 609 | 60 | 321 | 2.08e-12 | 69.7 |
| MS.gene20252.t1 | AT4G33260 | 24.407 | 295 | 178 | 11 | 312 | 570 | 136 | 421 | 1.54e-15 | 79.7 |
| MS.gene20252.t1 | AT4G33270 | 24.407 | 295 | 178 | 11 | 312 | 570 | 146 | 431 | 1.56e-15 | 79.7 |
| MS.gene20252.t1 | AT4G32990 | 27.667 | 300 | 143 | 12 | 239 | 507 | 12 | 268 | 2.10e-15 | 77.4 |
| MS.gene20252.t1 | AT3G44530 | 24.022 | 358 | 208 | 11 | 309 | 611 | 16 | 364 | 6.64e-15 | 79.0 |
| MS.gene20252.t1 | AT5G13840 | 22.756 | 312 | 196 | 10 | 309 | 588 | 177 | 475 | 7.36e-15 | 77.8 |
| MS.gene20252.t1 | AT5G13840 | 22.756 | 312 | 196 | 10 | 309 | 588 | 177 | 475 | 7.36e-15 | 77.8 |
| MS.gene20252.t1 | AT3G44530 | 24.022 | 358 | 208 | 11 | 309 | 611 | 16 | 364 | 8.95e-15 | 78.6 |
| MS.gene20252.t1 | AT4G29830 | 27.018 | 285 | 165 | 10 | 245 | 509 | 58 | 319 | 1.24e-14 | 75.9 |
| MS.gene20252.t1 | AT4G29830 | 23.148 | 324 | 189 | 10 | 339 | 611 | 6 | 320 | 2.30e-12 | 68.9 |
| MS.gene20252.t1 | AT4G34460 | 23.759 | 282 | 174 | 8 | 309 | 570 | 48 | 308 | 1.34e-14 | 75.5 |
| MS.gene20252.t1 | AT5G58230 | 27.749 | 191 | 114 | 8 | 334 | 510 | 167 | 347 | 1.37e-14 | 76.6 |
| MS.gene20252.t1 | AT5G26900 | 24.490 | 294 | 179 | 10 | 312 | 570 | 132 | 417 | 2.10e-14 | 76.3 |
| MS.gene20252.t1 | AT4G33260 | 24.399 | 291 | 175 | 11 | 312 | 566 | 136 | 417 | 2.14e-14 | 76.3 |
| MS.gene20252.t1 | AT3G16650 | 20.602 | 432 | 268 | 13 | 215 | 606 | 56 | 452 | 2.75e-14 | 76.3 |
| MS.gene20252.t1 | AT1G48630 | 24.535 | 269 | 163 | 8 | 320 | 577 | 30 | 269 | 4.18e-14 | 74.3 |
| MS.gene20252.t1 | AT1G48630 | 26.923 | 260 | 156 | 9 | 339 | 589 | 7 | 241 | 8.78e-14 | 73.2 |
| MS.gene20252.t1 | AT4G15900 | 21.104 | 308 | 199 | 6 | 333 | 606 | 162 | 459 | 5.84e-14 | 75.1 |
| MS.gene20252.t1 | AT4G15900 | 21.203 | 349 | 236 | 7 | 236 | 582 | 165 | 476 | 6.98e-13 | 71.6 |
| MS.gene20252.t1 | AT1G18830 | 28.755 | 233 | 139 | 10 | 295 | 511 | 105 | 326 | 7.37e-14 | 75.5 |
| MS.gene20252.t1 | AT1G18830 | 28.755 | 233 | 139 | 10 | 295 | 511 | 105 | 326 | 8.15e-14 | 75.5 |
| MS.gene20252.t1 | AT1G18830 | 28.755 | 233 | 139 | 10 | 295 | 511 | 105 | 326 | 8.15e-14 | 75.5 |
| MS.gene20252.t1 | AT5G27080 | 24.068 | 295 | 180 | 9 | 312 | 570 | 129 | 415 | 1.04e-13 | 73.9 |
| MS.gene20252.t1 | AT3G18130 | 23.420 | 269 | 166 | 8 | 320 | 577 | 30 | 269 | 1.36e-13 | 72.8 |
| MS.gene20252.t1 | AT3G18130 | 27.731 | 238 | 139 | 8 | 360 | 589 | 29 | 241 | 2.96e-13 | 71.6 |
| MS.gene20252.t1 | AT1G10580 | 24.409 | 381 | 233 | 13 | 177 | 528 | 196 | 550 | 2.45e-13 | 73.6 |
| MS.gene20252.t1 | AT1G10580 | 21.975 | 405 | 231 | 12 | 163 | 509 | 196 | 573 | 6.49e-11 | 65.9 |
| MS.gene20252.t1 | AT3G18140 | 23.099 | 342 | 203 | 11 | 261 | 589 | 7 | 301 | 2.88e-13 | 71.6 |
| MS.gene20252.t1 | AT5G27570 | 23.026 | 304 | 152 | 8 | 301 | 570 | 168 | 423 | 2.91e-13 | 72.8 |
| MS.gene20252.t1 | AT1G29260 | 28.218 | 202 | 108 | 10 | 420 | 613 | 96 | 268 | 3.60e-13 | 71.2 |
| MS.gene20252.t1 | AT1G18080 | 26.378 | 254 | 142 | 9 | 335 | 577 | 51 | 270 | 4.04e-13 | 71.2 |
| MS.gene20252.t1 | AT1G18080 | 26.616 | 263 | 158 | 10 | 339 | 591 | 7 | 244 | 1.31e-12 | 69.7 |
| MS.gene20252.t1 | AT1G73720 | 25.670 | 261 | 153 | 8 | 354 | 603 | 220 | 450 | 4.22e-13 | 72.4 |
| MS.gene20252.t1 | AT1G73720 | 25.904 | 166 | 113 | 3 | 314 | 469 | 221 | 386 | 6.32e-11 | 65.5 |
| MS.gene20252.t1 | AT5G27945 | 22.772 | 303 | 153 | 9 | 301 | 570 | 147 | 401 | 6.34e-13 | 71.6 |
| MS.gene20252.t1 | AT4G22910 | 21.951 | 246 | 161 | 3 | 350 | 570 | 220 | 459 | 6.40e-13 | 71.6 |
| MS.gene20252.t1 | AT2G22040 | 23.209 | 349 | 196 | 13 | 261 | 589 | 12 | 308 | 9.93e-13 | 70.1 |
| MS.gene20252.t1 | AT3G21540 | 25.391 | 256 | 151 | 6 | 319 | 572 | 77 | 294 | 2.13e-12 | 70.9 |
| MS.gene20252.t1 | AT4G34460 | 21.528 | 288 | 180 | 11 | 342 | 609 | 60 | 321 | 2.25e-12 | 69.3 |
| MS.gene20252.t1 | AT4G34460 | 23.549 | 293 | 180 | 9 | 243 | 515 | 61 | 329 | 2.37e-12 | 69.3 |
| MS.gene20252.t1 | AT5G16750 | 22.846 | 267 | 158 | 8 | 319 | 568 | 417 | 652 | 4.23e-12 | 69.7 |
| MS.gene20252.t1 | AT5G16750 | 22.993 | 274 | 152 | 6 | 237 | 508 | 436 | 652 | 8.79e-12 | 68.9 |
| MS.gene20252.t1 | AT5G64730 | 21.577 | 241 | 159 | 4 | 343 | 582 | 14 | 225 | 5.50e-12 | 67.4 |
| MS.gene20252.t1 | AT5G43920 | 24.522 | 314 | 187 | 11 | 234 | 508 | 211 | 513 | 6.14e-12 | 68.9 |
| MS.gene20252.t1 | AT4G11920 | 21.951 | 246 | 161 | 3 | 350 | 570 | 212 | 451 | 6.70e-12 | 68.6 |
| MS.gene20252.t1 | AT5G64630 | 21.995 | 391 | 209 | 12 | 250 | 575 | 16 | 375 | 8.84e-12 | 68.2 |
| MS.gene20252.t1 | AT1G49040 | 22.394 | 259 | 167 | 4 | 320 | 575 | 869 | 1096 | 1.41e-11 | 68.2 |
| MS.gene20252.t1 | AT4G35050 | 25.322 | 233 | 109 | 8 | 343 | 571 | 165 | 336 | 2.59e-11 | 66.6 |
| MS.gene20252.t1 | AT2G32950 | 23.404 | 282 | 167 | 12 | 347 | 609 | 420 | 671 | 2.79e-11 | 67.0 |
| MS.gene20252.t1 | AT2G32950 | 23.404 | 282 | 167 | 12 | 347 | 609 | 307 | 558 | 2.84e-11 | 67.0 |
| MS.gene20252.t1 | AT5G64630 | 22.135 | 384 | 203 | 12 | 257 | 575 | 23 | 375 | 2.90e-11 | 66.2 |
| MS.gene20252.t1 | AT5G50230 | 22.297 | 296 | 189 | 7 | 343 | 607 | 221 | 506 | 3.83e-11 | 66.2 |
| MS.gene20252.t1 | AT4G32551 | 20.821 | 341 | 214 | 12 | 235 | 568 | 677 | 968 | 5.53e-11 | 66.2 |
| MS.gene20252.t1 | AT4G32551 | 20.821 | 341 | 214 | 12 | 235 | 568 | 639 | 930 | 7.29e-11 | 65.9 |
| MS.gene20252.t1 | AT2G30050 | 25.685 | 292 | 137 | 13 | 341 | 608 | 50 | 285 | 8.63e-11 | 63.9 |
| MS.gene20252.t1 | AT2G46280 | 26.457 | 223 | 136 | 8 | 307 | 511 | 11 | 223 | 9.47e-11 | 63.2 |
Find 132 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTCAAGGACCATATATTTA+TGG | 0.160905 | 5.1:+8631838 | None:intergenic |
| GCCAACACCAATTTCTTATT+AGG | 0.182828 | 5.1:+8633436 | None:intergenic |
| ATTCCACTTCAGAGAAAATA+TGG | 0.199133 | 5.1:+8634605 | None:intergenic |
| GGGATTCAACAGCTCGTATT+TGG | 0.216439 | 5.1:-8635497 | MS.gene20252:CDS |
| ATGATGGTCAAGCACGAATT+TGG | 0.225147 | 5.1:-8634873 | MS.gene20252:CDS |
| ATGCCCCATTGATGGAAATT+TGG | 0.235574 | 5.1:-8639135 | MS.gene20252:CDS |
| AAAGGAGATTATCTTCTTAC+TGG | 0.244089 | 5.1:-8634579 | MS.gene20252:CDS |
| TAAGTCAGATGTGACAATTT+TGG | 0.259321 | 5.1:-8637690 | MS.gene20252:CDS |
| ATGATACATGTTTGCAAGAT+TGG | 0.283530 | 5.1:-8634303 | MS.gene20252:CDS |
| ACAGGATCCTTTCTTGCATC+AGG | 0.293482 | 5.1:-8637539 | MS.gene20252:CDS |
| CCAACACCAATTTCTTATTA+GGG | 0.296590 | 5.1:+8633437 | None:intergenic |
| AAATAACCCTAATAAGAAAT+TGG | 0.302756 | 5.1:-8633443 | MS.gene20252:CDS |
| TAACAATACAGTTTGCGTTT+TGG | 0.312131 | 5.1:-8631723 | MS.gene20252:CDS |
| CTTGAGGAGGATGGAGCATT+TGG | 0.317776 | 5.1:-8638498 | MS.gene20252:CDS |
| TTCCACATCCCATAGCTTTA+CGG | 0.321852 | 5.1:+8632223 | None:intergenic |
| TCAGAAGGGACTACAGTTCT+TGG | 0.325341 | 5.1:-8639084 | MS.gene20252:CDS |
| GTAGTTGGTGCCAATTCTTT+TGG | 0.325469 | 5.1:-8631956 | MS.gene20252:CDS |
| GATCAAGAAGATAAGGTTAA+TGG | 0.329734 | 5.1:-8638636 | MS.gene20252:CDS |
| ACTGGTTTATTTGGTTCTAC+AGG | 0.338717 | 5.1:-8631928 | MS.gene20252:CDS |
| TGTTGGTGTTGCAGCACATC+AGG | 0.356475 | 5.1:-8635422 | MS.gene20252:CDS |
| GTGAAGTTAATTGTATCAAA+TGG | 0.359842 | 5.1:-8633833 | MS.gene20252:CDS |
| GTTCAACACTCGACGTTGAT+TGG | 0.363966 | 5.1:-8634365 | MS.gene20252:CDS |
| TTTCGCTACCTTCAAGAATC+AGG | 0.370255 | 5.1:-8639847 | MS.gene20252:intron |
| GGATCCCACAGGTTCATTAC+TGG | 0.376344 | 5.1:-8633811 | MS.gene20252:CDS |
| AATGATCTTGCCATCATTCA+AGG | 0.388091 | 5.1:+8631823 | None:intergenic |
| CACAGTCGAAGGGTCGTTCT+TGG | 0.388341 | 5.1:+8635443 | None:intergenic |
| ATGACAAATCCATAAATATA+TGG | 0.390659 | 5.1:-8631847 | MS.gene20252:CDS |
| TCGATGGGTCTGCAATTGTA+TGG | 0.402215 | 5.1:-8634551 | MS.gene20252:CDS |
| CCAGTCAAAACCAAAAGAAT+TGG | 0.403549 | 5.1:+8631946 | None:intergenic |
| CTGGCTAAATACTCACCATT+GGG | 0.418567 | 5.1:+8631878 | None:intergenic |
| CTTCTTACTGGAAGTTTCGA+TGG | 0.421511 | 5.1:-8634567 | MS.gene20252:CDS |
| GGTACCAAATTTCCATCAAT+GGG | 0.429149 | 5.1:+8639131 | None:intergenic |
| AAAATTGTCACATCTGACTT+AGG | 0.438471 | 5.1:+8637692 | None:intergenic |
| CTTGCAACCGGTTCTTATGA+TGG | 0.442121 | 5.1:-8634889 | MS.gene20252:CDS |
| AGAAAAGGAAAGACAGGAAA+GGG | 0.448728 | 5.1:-8638751 | MS.gene20252:CDS |
| GCTATCAGATGGAGCCCAAC+TGG | 0.449961 | 5.1:-8633475 | MS.gene20252:CDS |
| GCACGAATTTGGACCGCTAA+TGG | 0.450598 | 5.1:-8634862 | MS.gene20252:intron |
| TGGTACCAAATTTCCATCAA+TGG | 0.450794 | 5.1:+8639130 | None:intergenic |
| TGCTTGACCATCATAAGAAC+CGG | 0.451683 | 5.1:+8634882 | None:intergenic |
| CTGGTTTATTTGGTTCTACA+GGG | 0.456380 | 5.1:-8631927 | MS.gene20252:CDS |
| TTATTAGGGTTATTTGTAGC+AGG | 0.457403 | 5.1:+8633451 | None:intergenic |
| ATGACATACCTGATTCTTGA+AGG | 0.464229 | 5.1:+8639839 | None:intergenic |
| AAGATGTCACTACACTTGAT+TGG | 0.465443 | 5.1:-8635377 | MS.gene20252:CDS |
| ATTAACAAATGCCCCATTGA+TGG | 0.468955 | 5.1:-8639143 | MS.gene20252:CDS |
| AAGGGAGAAAGAACGTGAAA+AGG | 0.469916 | 5.1:-8638733 | MS.gene20252:CDS |
| CAACATTTCAGGCTGGTAGT+TGG | 0.474799 | 5.1:-8631971 | MS.gene20252:intron |
| AAATCAGATCAGTAGAGAAA+TGG | 0.476182 | 5.1:-8638664 | MS.gene20252:CDS |
| AACATGTATCATGGTGTCAT+TGG | 0.480498 | 5.1:+8634314 | None:intergenic |
| TGATGGAAATTTGGTACCAC+CGG | 0.482954 | 5.1:-8639126 | MS.gene20252:CDS |
| TGAAGTTAATTGTATCAAAT+GGG | 0.484187 | 5.1:-8633832 | MS.gene20252:CDS |
| TACCAACCCTGATGCAAGAA+AGG | 0.485782 | 5.1:+8637532 | None:intergenic |
| GGATTTGTCATGGGACCCAC+TGG | 0.485949 | 5.1:+8631859 | None:intergenic |
| CAGGATCCTTTCTTGCATCA+GGG | 0.486170 | 5.1:-8637538 | MS.gene20252:intron |
| GACAAGAGAAAAGGAAAGAC+AGG | 0.487085 | 5.1:-8638757 | MS.gene20252:CDS |
| GTACATATGTCCATGGGCTC+TGG | 0.487988 | 5.1:+8637743 | None:intergenic |
| CTTAGGTCTGTGCTTGTGCA+TGG | 0.489170 | 5.1:-8637568 | MS.gene20252:intron |
| AAACTAATTCATAGCTTGAA+TGG | 0.491309 | 5.1:-8632194 | MS.gene20252:CDS |
| TATATTTATGGATTTGTCAT+GGG | 0.493957 | 5.1:+8631850 | None:intergenic |
| TTCTTACTGGAAGTTTCGAT+GGG | 0.494004 | 5.1:-8634566 | MS.gene20252:CDS |
| TCTCTGAAGTGGAATAAGAA+AGG | 0.497421 | 5.1:-8634597 | MS.gene20252:CDS |
| AATATATGGTCCTTGAATGA+TGG | 0.499260 | 5.1:-8631833 | MS.gene20252:CDS |
| TTGACTCTACCGTAAAGCTA+TGG | 0.503121 | 5.1:-8632232 | MS.gene20252:CDS |
| TTCCACTTCAGAGAAAATAT+GGG | 0.504853 | 5.1:+8634606 | None:intergenic |
| ATTGAGTTCGACGGAGGTGA+TGG | 0.504919 | 5.1:+8639879 | None:intergenic |
| ACTGGCTAAATACTCACCAT+TGG | 0.504998 | 5.1:+8631877 | None:intergenic |
| GCTTGTGCATGGAGTCCTAC+AGG | 0.508560 | 5.1:-8637557 | MS.gene20252:CDS |
| TATTTGTAGCAGGACCAGTT+GGG | 0.508917 | 5.1:+8633461 | None:intergenic |
| AAGCTATGGGATGTGGAACT+CGG | 0.509332 | 5.1:-8632218 | MS.gene20252:CDS |
| GGTCTCAGATCAAGAAGATA+AGG | 0.514110 | 5.1:-8638643 | MS.gene20252:CDS |
| CCCTAATAAGAAATTGGTGT+TGG | 0.516897 | 5.1:-8633437 | MS.gene20252:CDS |
| GAGGAGGATGGAGCATTTGG+AGG | 0.517057 | 5.1:-8638495 | MS.gene20252:intron |
| ATATATTTATGGATTTGTCA+TGG | 0.524784 | 5.1:+8631849 | None:intergenic |
| AAGAAGAAGAAAACGACAGA+GGG | 0.524916 | 5.1:-8638826 | MS.gene20252:CDS |
| TCTTGTTACATTTGTTCAGA+AGG | 0.525010 | 5.1:-8639099 | MS.gene20252:CDS |
| GAGGGGACACTACTTGCAAC+CGG | 0.525092 | 5.1:-8634901 | MS.gene20252:CDS |
| TACCGTAAAGCTATGGGATG+TGG | 0.533670 | 5.1:-8632225 | MS.gene20252:CDS |
| CCGCGGTCTGACAAGAGAAA+AGG | 0.535025 | 5.1:-8638766 | MS.gene20252:CDS |
| ATAAGAAATTGGTGTTGGCT+AGG | 0.535443 | 5.1:-8633432 | MS.gene20252:intron |
| AATCTTGCAAACATGTATCA+TGG | 0.536038 | 5.1:+8634305 | None:intergenic |
| GAGAAAAGGAAAGACAGGAA+AGG | 0.536296 | 5.1:-8638752 | MS.gene20252:CDS |
| CTTGTTACATTTGTTCAGAA+GGG | 0.539198 | 5.1:-8639098 | MS.gene20252:CDS |
| CGATGGGTCTGCAATTGTAT+GGG | 0.539354 | 5.1:-8634550 | MS.gene20252:CDS |
| GGGACTACAGTTCTTGGAGA+TGG | 0.540425 | 5.1:-8639078 | MS.gene20252:CDS |
| TAAGGTTAATGTAAAGCTTG+AGG | 0.542812 | 5.1:-8638514 | MS.gene20252:CDS |
| AATGTAAAGCTTGAGGAGGA+TGG | 0.549555 | 5.1:-8638507 | MS.gene20252:CDS |
| TGATGTTGTACATATGTCCA+TGG | 0.557105 | 5.1:+8637736 | None:intergenic |
| TTGTATAGGACCAGAGCCCA+TGG | 0.557449 | 5.1:-8637753 | MS.gene20252:intron |
| AAGAAAGGGCCTACCATTAG+CGG | 0.557736 | 5.1:+8634849 | None:intergenic |
| ACGTGAAAAGGATAAAGAGA+AGG | 0.558461 | 5.1:-8638721 | MS.gene20252:CDS |
| ATGTGTATAAACCTGGTGCC+CGG | 0.558730 | 5.1:+8634254 | None:intergenic |
| TGACTCTACCGTAAAGCTAT+GGG | 0.561117 | 5.1:-8632231 | MS.gene20252:CDS |
| TTATTTGTAGCAGGACCAGT+TGG | 0.561581 | 5.1:+8633460 | None:intergenic |
| AGGAGATATATGCTATCAGA+TGG | 0.562544 | 5.1:-8633486 | MS.gene20252:CDS |
| ATTAAAACATACAACGGCAA+TGG | 0.567817 | 5.1:-8631803 | MS.gene20252:CDS |
| GTTGGTGTTGCAGCACATCA+GGG | 0.572151 | 5.1:-8635421 | MS.gene20252:CDS |
| GATGGAAATTTGGTACCACC+GGG | 0.577174 | 5.1:-8639125 | MS.gene20252:CDS |
| TGCAACACCAACACAGTCGA+AGG | 0.580347 | 5.1:+8635432 | None:intergenic |
| GAGGTCTGTTGGAACAAGGA+GGG | 0.582876 | 5.1:-8631770 | MS.gene20252:CDS |
| ACTATTGCATTCAGCCCCAA+TGG | 0.585345 | 5.1:-8631893 | MS.gene20252:CDS |
| TGGAAATTTGGTACCACCGG+GGG | 0.587763 | 5.1:-8639123 | MS.gene20252:CDS |
| TTTGGAAGGGCATAAGTCAG+AGG | 0.594030 | 5.1:-8637672 | MS.gene20252:intron |
| AGCTATGGGATGTGGAACTC+GGG | 0.599942 | 5.1:-8632217 | MS.gene20252:CDS |
| AAAACATACAACGGCAATGG+AGG | 0.602122 | 5.1:-8631800 | MS.gene20252:CDS |
| TTTGTGTTTGGGAATGAGGG+TGG | 0.611504 | 5.1:-8639167 | MS.gene20252:CDS |
| CGAGGCCAGTAATGAACCTG+TGG | 0.613287 | 5.1:+8633806 | None:intergenic |
| GAACGACCCTTCGACTGTGT+TGG | 0.624305 | 5.1:-8635439 | MS.gene20252:CDS |
| TTCAGATGATAACACTGCAA+AGG | 0.624464 | 5.1:-8633781 | MS.gene20252:intron |
| TGTATCAAATGGGATCCCAC+AGG | 0.627567 | 5.1:-8633822 | MS.gene20252:CDS |
| GACGAGATAATTGAGTTCGA+CGG | 0.629252 | 5.1:+8639870 | None:intergenic |
| GATGTTGTACATATGTCCAT+GGG | 0.631848 | 5.1:+8637737 | None:intergenic |
| AATGGTGAGTATTTAGCCAG+TGG | 0.632034 | 5.1:-8631875 | MS.gene20252:CDS |
| AAGATCATTAAAACATACAA+CGG | 0.633785 | 5.1:-8631809 | MS.gene20252:CDS |
| ATGGTGAGTATTTAGCCAGT+GGG | 0.634149 | 5.1:-8631874 | MS.gene20252:CDS |
| TGAGGTCTGTTGGAACAAGG+AGG | 0.635956 | 5.1:-8631771 | MS.gene20252:CDS |
| GAGATAATTGAGTTCGACGG+AGG | 0.641503 | 5.1:+8639873 | None:intergenic |
| GGTTAATGTAAAGCTTGAGG+AGG | 0.643371 | 5.1:-8638511 | MS.gene20252:CDS |
| GAGTACATTAAGCAAACACA+AGG | 0.647125 | 5.1:-8634631 | MS.gene20252:CDS |
| TTGGTGTTGCAGCACATCAG+GGG | 0.650194 | 5.1:-8635420 | MS.gene20252:CDS |
| ACAAATGTAACAAGAGCCCC+CGG | 0.650451 | 5.1:+8639107 | None:intergenic |
| GATGCAAGAAAGGATCCTGT+AGG | 0.654010 | 5.1:+8637542 | None:intergenic |
| TTCATAGCTTGAATGGACAC+AGG | 0.666219 | 5.1:-8632187 | MS.gene20252:intron |
| GCAACACCAACACAGTCGAA+GGG | 0.676096 | 5.1:+8635433 | None:intergenic |
| AAAGAAGAAGAAAACGACAG+AGG | 0.683677 | 5.1:-8638827 | MS.gene20252:CDS |
| AAAGAGCATGATGGTGACCG+CGG | 0.685210 | 5.1:-8638783 | MS.gene20252:CDS |
| GAGGCCAGTAATGAACCTGT+GGG | 0.694911 | 5.1:+8633807 | None:intergenic |
| AGTGTTATCATCTGAACACG+AGG | 0.704222 | 5.1:+8633788 | None:intergenic |
| AGAAGAAGAAAACGACAGAG+GGG | 0.711456 | 5.1:-8638825 | MS.gene20252:CDS |
| TGGCTAAATACTCACCATTG+GGG | 0.715065 | 5.1:+8631879 | None:intergenic |
| ATGGAAATTTGGTACCACCG+GGG | 0.720037 | 5.1:-8639124 | MS.gene20252:CDS |
| TCTGACTTAGGAAATTCACA+TGG | 0.743110 | 5.1:+8637704 | None:intergenic |
| GTACCAAATTTCCATCAATG+GGG | 0.758288 | 5.1:+8639132 | None:intergenic |
| AGTACATTAAGCAAACACAA+GGG | 0.758457 | 5.1:-8634630 | MS.gene20252:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.1 | gene | 8631709 | 8639908 | 8631709 | ID=MS.gene20252 |
| chr5.1 | mRNA | 8631709 | 8639908 | 8631709 | ID=MS.gene20252.t1;Parent=MS.gene20252 |
| chr5.1 | exon | 8639848 | 8639908 | 8639848 | ID=MS.gene20252.t1.exon1;Parent=MS.gene20252.t1 |
| chr5.1 | CDS | 8639848 | 8639908 | 8639848 | ID=cds.MS.gene20252.t1;Parent=MS.gene20252.t1 |
| chr5.1 | exon | 8639061 | 8639206 | 8639061 | ID=MS.gene20252.t1.exon2;Parent=MS.gene20252.t1 |
| chr5.1 | CDS | 8639061 | 8639206 | 8639061 | ID=cds.MS.gene20252.t1;Parent=MS.gene20252.t1 |
| chr5.1 | exon | 8638496 | 8638940 | 8638496 | ID=MS.gene20252.t1.exon3;Parent=MS.gene20252.t1 |
| chr5.1 | CDS | 8638496 | 8638940 | 8638496 | ID=cds.MS.gene20252.t1;Parent=MS.gene20252.t1 |
| chr5.1 | exon | 8637673 | 8637767 | 8637673 | ID=MS.gene20252.t1.exon4;Parent=MS.gene20252.t1 |
| chr5.1 | CDS | 8637673 | 8637767 | 8637673 | ID=cds.MS.gene20252.t1;Parent=MS.gene20252.t1 |
| chr5.1 | exon | 8637539 | 8637585 | 8637539 | ID=MS.gene20252.t1.exon5;Parent=MS.gene20252.t1 |
| chr5.1 | CDS | 8637539 | 8637585 | 8637539 | ID=cds.MS.gene20252.t1;Parent=MS.gene20252.t1 |
| chr5.1 | exon | 8635374 | 8635524 | 8635374 | ID=MS.gene20252.t1.exon6;Parent=MS.gene20252.t1 |
| chr5.1 | CDS | 8635374 | 8635524 | 8635374 | ID=cds.MS.gene20252.t1;Parent=MS.gene20252.t1 |
| chr5.1 | exon | 8634863 | 8634926 | 8634863 | ID=MS.gene20252.t1.exon7;Parent=MS.gene20252.t1 |
| chr5.1 | CDS | 8634863 | 8634926 | 8634863 | ID=cds.MS.gene20252.t1;Parent=MS.gene20252.t1 |
| chr5.1 | exon | 8634505 | 8634663 | 8634505 | ID=MS.gene20252.t1.exon8;Parent=MS.gene20252.t1 |
| chr5.1 | CDS | 8634505 | 8634663 | 8634505 | ID=cds.MS.gene20252.t1;Parent=MS.gene20252.t1 |
| chr5.1 | exon | 8634266 | 8634387 | 8634266 | ID=MS.gene20252.t1.exon9;Parent=MS.gene20252.t1 |
| chr5.1 | CDS | 8634266 | 8634387 | 8634266 | ID=cds.MS.gene20252.t1;Parent=MS.gene20252.t1 |
| chr5.1 | exon | 8633782 | 8633856 | 8633782 | ID=MS.gene20252.t1.exon10;Parent=MS.gene20252.t1 |
| chr5.1 | CDS | 8633782 | 8633856 | 8633782 | ID=cds.MS.gene20252.t1;Parent=MS.gene20252.t1 |
| chr5.1 | exon | 8633582 | 8633635 | 8633582 | ID=MS.gene20252.t1.exon11;Parent=MS.gene20252.t1 |
| chr5.1 | CDS | 8633582 | 8633635 | 8633582 | ID=cds.MS.gene20252.t1;Parent=MS.gene20252.t1 |
| chr5.1 | exon | 8633433 | 8633506 | 8633433 | ID=MS.gene20252.t1.exon12;Parent=MS.gene20252.t1 |
| chr5.1 | CDS | 8633433 | 8633506 | 8633433 | ID=cds.MS.gene20252.t1;Parent=MS.gene20252.t1 |
| chr5.1 | exon | 8632188 | 8632262 | 8632188 | ID=MS.gene20252.t1.exon13;Parent=MS.gene20252.t1 |
| chr5.1 | CDS | 8632188 | 8632262 | 8632188 | ID=cds.MS.gene20252.t1;Parent=MS.gene20252.t1 |
| chr5.1 | exon | 8631709 | 8631982 | 8631709 | ID=MS.gene20252.t1.exon14;Parent=MS.gene20252.t1 |
| chr5.1 | CDS | 8631709 | 8631982 | 8631709 | ID=cds.MS.gene20252.t1;Parent=MS.gene20252.t1 |
| Gene Sequence |
| Protein sequence |
