Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22813.t1 | XP_003626548.1 | 100 | 474 | 0 | 0 | 1 | 474 | 1 | 474 | 3.80E-272 | 946.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22813.t1 | P38557 | 96.4 | 471 | 17 | 0 | 1 | 471 | 1 | 471 | 5.0e-265 | 914.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22813.t1 | G7L416 | 100.0 | 474 | 0 | 0 | 1 | 474 | 1 | 474 | 2.7e-272 | 946.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049190 | MS.gene22813 | 0.835215 | 1.91E-56 | -1.69E-46 |
| MS.gene049418 | MS.gene22813 | 0.817899 | 2.60E-52 | -1.69E-46 |
| MS.gene050630 | MS.gene22813 | 0.973303 | 3.35E-136 | -1.69E-46 |
| MS.gene051248 | MS.gene22813 | 0.842348 | 2.73E-58 | -1.69E-46 |
| MS.gene052731 | MS.gene22813 | 0.816143 | 6.44E-52 | -1.69E-46 |
| MS.gene053144 | MS.gene22813 | 0.82071 | 5.94E-53 | -1.69E-46 |
| MS.gene053500 | MS.gene22813 | 0.804166 | 2.46E-49 | -1.69E-46 |
| MS.gene054584 | MS.gene22813 | 0.818949 | 1.50E-52 | -1.69E-46 |
| MS.gene056228 | MS.gene22813 | 0.84832 | 6.61E-60 | -1.69E-46 |
| MS.gene056396 | MS.gene22813 | 0.836135 | 1.12E-56 | -1.69E-46 |
| MS.gene059154 | MS.gene22813 | 0.817245 | 3.64E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene87267 | MS.gene22813 | PPI |
| MS.gene064762 | MS.gene22813 | PPI |
| MS.gene49099 | MS.gene22813 | PPI |
| MS.gene35118 | MS.gene22813 | PPI |
| MS.gene031278 | MS.gene22813 | PPI |
| MS.gene69396 | MS.gene22813 | PPI |
| MS.gene42253 | MS.gene22813 | PPI |
| MS.gene22813 | MS.gene006768 | PPI |
| MS.gene22813 | MS.gene69797 | PPI |
| MS.gene56557 | MS.gene22813 | PPI |
| MS.gene22813 | MS.gene017695 | PPI |
| MS.gene58838 | MS.gene22813 | PPI |
| MS.gene013972 | MS.gene22813 | PPI |
| MS.gene36449 | MS.gene22813 | PPI |
| MS.gene01697 | MS.gene22813 | PPI |
| MS.gene01284 | MS.gene22813 | PPI |
| MS.gene050630 | MS.gene22813 | PPI |
| MS.gene031528 | MS.gene22813 | PPI |
| MS.gene028342 | MS.gene22813 | PPI |
| MS.gene024462 | MS.gene22813 | PPI |
| MS.gene34573 | MS.gene22813 | PPI |
| MS.gene014419 | MS.gene22813 | PPI |
| MS.gene025926 | MS.gene22813 | PPI |
| MS.gene22813 | MS.gene99805 | PPI |
| MS.gene34503 | MS.gene22813 | PPI |
| MS.gene002306 | MS.gene22813 | PPI |
| MS.gene02265 | MS.gene22813 | PPI |
| MS.gene96812 | MS.gene22813 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22813.t1 | MTR_7g117050 | 100.000 | 474 | 0 | 0 | 1 | 474 | 1 | 474 | 0.0 | 993 |
| MS.gene22813.t1 | MTR_4g017630 | 36.073 | 438 | 263 | 7 | 3 | 439 | 2 | 423 | 3.42e-89 | 280 |
| MS.gene22813.t1 | MTR_4g019110 | 35.160 | 438 | 267 | 7 | 3 | 439 | 2 | 423 | 2.93e-87 | 275 |
| MS.gene22813.t1 | MTR_4g019090 | 35.160 | 438 | 267 | 7 | 3 | 439 | 2 | 423 | 4.31e-87 | 274 |
| MS.gene22813.t1 | MTR_1g101130 | 35.160 | 438 | 267 | 7 | 3 | 439 | 2 | 423 | 5.06e-87 | 274 |
| MS.gene22813.t1 | MTR_2g031310 | 35.160 | 438 | 267 | 7 | 3 | 439 | 2 | 423 | 8.87e-87 | 273 |
| MS.gene22813.t1 | MTR_8g098360 | 34.932 | 438 | 268 | 7 | 3 | 439 | 2 | 423 | 1.15e-86 | 273 |
| MS.gene22813.t1 | MTR_3g113970 | 35.666 | 443 | 260 | 9 | 3 | 439 | 2 | 425 | 2.01e-86 | 272 |
| MS.gene22813.t1 | MTR_4g094535 | 35.160 | 438 | 267 | 7 | 3 | 439 | 2 | 423 | 2.44e-86 | 272 |
| MS.gene22813.t1 | MTR_7g089120 | 34.932 | 438 | 268 | 7 | 3 | 439 | 2 | 423 | 4.80e-85 | 269 |
| MS.gene22813.t1 | MTR_8g107250 | 34.852 | 439 | 268 | 8 | 3 | 439 | 2 | 424 | 4.05e-84 | 266 |
| MS.gene22813.t1 | MTR_7g085800 | 31.685 | 445 | 283 | 8 | 3 | 439 | 2 | 433 | 2.36e-69 | 228 |
| MS.gene22813.t1 | MTR_6g029190 | 31.685 | 445 | 282 | 8 | 3 | 438 | 2 | 433 | 6.70e-67 | 221 |
| MS.gene22813.t1 | MTR_4g097830 | 31.614 | 446 | 282 | 9 | 3 | 439 | 2 | 433 | 7.23e-67 | 221 |
| MS.gene22813.t1 | MTR_8g085980 | 30.562 | 445 | 288 | 8 | 3 | 439 | 2 | 433 | 1.12e-66 | 221 |
| MS.gene22813.t1 | MTR_3g110720 | 31.614 | 446 | 282 | 9 | 3 | 439 | 2 | 433 | 1.53e-66 | 221 |
| MS.gene22813.t1 | MTR_1g106005 | 31.390 | 446 | 283 | 9 | 3 | 439 | 2 | 433 | 3.78e-66 | 219 |
| MS.gene22813.t1 | MTR_2g041670 | 30.856 | 444 | 283 | 9 | 3 | 439 | 2 | 428 | 2.63e-54 | 189 |
| MS.gene22813.t1 | MTR_2g041400 | 31.084 | 415 | 266 | 8 | 3 | 410 | 2 | 403 | 3.27e-52 | 182 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22813.t1 | AT3G61650 | 96.391 | 471 | 17 | 0 | 1 | 471 | 1 | 471 | 0.0 | 959 |
| MS.gene22813.t1 | AT5G05620 | 95.329 | 471 | 22 | 0 | 1 | 471 | 1 | 471 | 0.0 | 952 |
| MS.gene22813.t1 | AT5G44340 | 36.073 | 438 | 263 | 7 | 3 | 439 | 2 | 423 | 2.53e-89 | 280 |
| MS.gene22813.t1 | AT4G20890 | 35.616 | 438 | 265 | 7 | 3 | 439 | 2 | 423 | 1.90e-88 | 277 |
| MS.gene22813.t1 | AT5G23860 | 35.388 | 438 | 266 | 7 | 3 | 439 | 2 | 423 | 1.53e-87 | 275 |
| MS.gene22813.t1 | AT5G23860 | 35.388 | 438 | 266 | 7 | 3 | 439 | 2 | 423 | 1.53e-87 | 275 |
| MS.gene22813.t1 | AT2G29550 | 35.845 | 438 | 264 | 7 | 3 | 439 | 2 | 423 | 1.81e-87 | 275 |
| MS.gene22813.t1 | AT1G75780 | 35.991 | 439 | 263 | 8 | 3 | 439 | 2 | 424 | 9.42e-87 | 273 |
| MS.gene22813.t1 | AT5G62700 | 35.160 | 438 | 267 | 7 | 3 | 439 | 2 | 423 | 2.44e-86 | 272 |
| MS.gene22813.t1 | AT5G62690 | 35.160 | 438 | 267 | 7 | 3 | 439 | 2 | 423 | 2.44e-86 | 272 |
| MS.gene22813.t1 | AT1G20010 | 35.991 | 439 | 263 | 8 | 3 | 439 | 2 | 424 | 3.24e-86 | 272 |
| MS.gene22813.t1 | AT5G12250 | 35.160 | 438 | 267 | 7 | 3 | 439 | 2 | 423 | 1.44e-85 | 270 |
| MS.gene22813.t1 | AT1G64740 | 30.337 | 445 | 289 | 8 | 3 | 439 | 2 | 433 | 5.79e-67 | 222 |
| MS.gene22813.t1 | AT5G19780 | 30.787 | 445 | 287 | 8 | 3 | 439 | 2 | 433 | 1.19e-66 | 221 |
| MS.gene22813.t1 | AT5G19770 | 30.787 | 445 | 287 | 8 | 3 | 439 | 2 | 433 | 1.19e-66 | 221 |
| MS.gene22813.t1 | AT4G14960 | 31.390 | 446 | 283 | 9 | 3 | 439 | 2 | 433 | 3.07e-66 | 220 |
| MS.gene22813.t1 | AT1G04820 | 31.390 | 446 | 283 | 9 | 3 | 439 | 2 | 433 | 3.88e-66 | 219 |
| MS.gene22813.t1 | AT1G50010 | 31.390 | 446 | 283 | 9 | 3 | 439 | 2 | 433 | 3.88e-66 | 219 |
| MS.gene22813.t1 | AT4G14960 | 33.154 | 371 | 234 | 7 | 3 | 369 | 2 | 362 | 1.28e-59 | 202 |
Find 116 sgRNAs with CRISPR-Local
Find 281 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTCTTCATACTACTGATTT+TGG | 0.178192 | 7.4:-1334451 | None:intergenic |
| CTTTCTGTAGTTGTCTAAAA+AGG | 0.228088 | 7.4:-1334050 | None:intergenic |
| TTGGAACCAAGGGTTATTAA+TGG | 0.245426 | 7.4:+1330533 | MS.gene22813:CDS |
| TTTAGCTTGGCTAGCATCTT+TGG | 0.260486 | 7.4:-1332988 | None:intergenic |
| AAGAGACATTATTGAGAGTT+TGG | 0.287511 | 7.4:+1334247 | MS.gene22813:CDS |
| ATTCCCCATTTGATATAATC+TGG | 0.291812 | 7.4:-1334296 | None:intergenic |
| CCGTGCTTTATTGATTGATT+TGG | 0.301583 | 7.4:+1330514 | MS.gene22813:CDS |
| GTTCTATGTCATTCAATTGC+TGG | 0.305453 | 7.4:+1331827 | MS.gene22813:CDS |
| ACCAGATCGGTATGGAATTC+TGG | 0.320154 | 7.4:+1330286 | MS.gene22813:CDS |
| TATATCCTGTCATTAGAAAA+TGG | 0.320239 | 7.4:-1332586 | None:intergenic |
| GAGTTTGGTTGACGAATATA+AGG | 0.328007 | 7.4:+1334262 | MS.gene22813:CDS |
| TCACTTGTCTCCATTTGGTT+AGG | 0.344251 | 7.4:-1332305 | None:intergenic |
| CCACATCACTTGTCTCCATT+TGG | 0.361567 | 7.4:-1332310 | None:intergenic |
| GTGGGGTCCTGCTAGTATTC+AGG | 0.370913 | 7.4:+1333618 | MS.gene22813:CDS |
| TCTCATGATTGTAAAGATTA+CGG | 0.376121 | 7.4:-1330574 | None:intergenic |
| GTGGTGGTGCTGGTAACAAT+TGG | 0.384508 | 7.4:+1330618 | MS.gene22813:CDS |
| GGTCATTCAGAGTCTCTAAA+AGG | 0.387096 | 7.4:-1332244 | None:intergenic |
| AATATTGTCATTACCTGAGT+TGG | 0.398405 | 7.4:-1333050 | None:intergenic |
| AATCCCCAGATTATATCAAA+TGG | 0.399374 | 7.4:+1334291 | MS.gene22813:CDS |
| CTGTGTGCAGTTTGAACATA+TGG | 0.400407 | 7.4:-1333762 | None:intergenic |
| GAATGTTGAAGAAGACATAA+TGG | 0.419103 | 7.4:+1331757 | MS.gene22813:CDS |
| TCTCCTGTCATCATATTATT+CGG | 0.421502 | 7.4:-1334403 | None:intergenic |
| ACAGGAGAGGGCAGTGCTGC+AGG | 0.426001 | 7.4:+1334418 | MS.gene22813:CDS |
| TCCTTCTCAACTTATCGTAC+TGG | 0.427815 | 7.4:-1334021 | None:intergenic |
| CTGGCAGGCAAAGAATATTA+TGG | 0.438413 | 7.4:+1332947 | MS.gene22813:intron |
| CACTTGTCTCCATTTGGTTA+GGG | 0.438949 | 7.4:-1332304 | None:intergenic |
| CATTCAATTGCTGGAGGGAC+AGG | 0.443706 | 7.4:+1331836 | MS.gene22813:CDS |
| ATTGCTGGAGGGACAGGCTC+AGG | 0.449849 | 7.4:+1331842 | MS.gene22813:CDS |
| GCCTCTGACAGTGGAACGTC+AGG | 0.450901 | 7.4:+1332610 | MS.gene22813:CDS |
| GAATTTGTTTGAGCAAATGT+TGG | 0.452915 | 7.4:-1332455 | None:intergenic |
| TCCAGAATTCCATACCGATC+TGG | 0.455345 | 7.4:-1330287 | None:intergenic |
| ATCCCCAGATTATATCAAAT+GGG | 0.456784 | 7.4:+1334292 | MS.gene22813:CDS |
| GCTGATCATGGTGGTGGTGC+TGG | 0.458497 | 7.4:+1330608 | MS.gene22813:CDS |
| GGGCAGTGCTGCAGGATCAC+TGG | 0.459086 | 7.4:+1334426 | MS.gene22813:CDS |
| TGAATTCCATTAATAACCCT+TGG | 0.461984 | 7.4:-1330539 | None:intergenic |
| GGCTCAGACATTTACTGAAA+AGG | 0.462594 | 7.4:-1334000 | None:intergenic |
| GATATAATCTGGGGATTCAC+AGG | 0.462754 | 7.4:-1334285 | None:intergenic |
| CAGACATCACAGTAGAAACT+AGG | 0.469353 | 7.4:-1332478 | None:intergenic |
| GTCATTAGAAAATGGCATCT+TGG | 0.471437 | 7.4:-1332578 | None:intergenic |
| CAGTGTGTTCCCTAACCAAA+TGG | 0.473529 | 7.4:+1332295 | MS.gene22813:CDS |
| TTCCCCATTTGATATAATCT+GGG | 0.474962 | 7.4:-1334295 | None:intergenic |
| AAGTCATTATTCATGTATCC+TGG | 0.481660 | 7.4:-1332524 | None:intergenic |
| GCTAGTTAACTTTATTGAGT+GGG | 0.483561 | 7.4:+1333600 | MS.gene22813:CDS |
| ATATTGTCATTACCTGAGTT+GGG | 0.490303 | 7.4:-1333049 | None:intergenic |
| AGAAAATGGCATCTTGGTGT+TGG | 0.491952 | 7.4:-1332572 | None:intergenic |
| CCTGAGTAGCGAAATCTTCG+AGG | 0.493935 | 7.4:-1330350 | None:intergenic |
| CAAATCAATCAATAAAGCAC+GGG | 0.496031 | 7.4:-1330513 | None:intergenic |
| AGTGTCAAAAGTGAGTTATA+TGG | 0.497975 | 7.4:-1332341 | None:intergenic |
| GAACACTTACAGCAAACATT+GGG | 0.502913 | 7.4:-1334075 | None:intergenic |
| CCTCGAAGATTTCGCTACTC+AGG | 0.506650 | 7.4:+1330350 | MS.gene22813:CDS |
| GAGTTGGGTCAACCTCTCCT+TGG | 0.508239 | 7.4:-1333034 | None:intergenic |
| TTAGGTCAGCGGCCTTATGT+TGG | 0.508961 | 7.4:+1333955 | MS.gene22813:intron |
| GATGGCAGTGACAGTCTTGA+GGG | 0.509882 | 7.4:+1331800 | MS.gene22813:CDS |
| GGAACACTTACAGCAAACAT+TGG | 0.511079 | 7.4:-1334076 | None:intergenic |
| TTGGGCTAGTGGCTACCATC+AGG | 0.512567 | 7.4:+1330637 | MS.gene22813:CDS |
| GAATTGATATATATTTAGCT+TGG | 0.513871 | 7.4:-1333001 | None:intergenic |
| TCTTAATGCTGATTGTGTTG+TGG | 0.515975 | 7.4:+1332376 | MS.gene22813:CDS |
| ATTGATTGATTTGGAACCAA+GGG | 0.524085 | 7.4:+1330523 | MS.gene22813:CDS |
| TAGTATGACTAGCCAACATA+AGG | 0.524461 | 7.4:-1333967 | None:intergenic |
| ACAACCACTCTTCGTTATCC+AGG | 0.524939 | 7.4:+1332506 | MS.gene22813:CDS |
| GATCCGAATAATATGATGAC+AGG | 0.524991 | 7.4:+1334400 | MS.gene22813:CDS |
| TTTGTTGCTGATCATGGTGG+TGG | 0.525133 | 7.4:+1330602 | MS.gene22813:CDS |
| AGGATATACGCCTCTGACAG+TGG | 0.526564 | 7.4:+1332601 | MS.gene22813:CDS |
| TGGTGGTGCTGGTAACAATT+GGG | 0.531520 | 7.4:+1330619 | MS.gene22813:CDS |
| AGATTATATCAAATGGGGAA+TGG | 0.549783 | 7.4:+1334298 | MS.gene22813:CDS |
| AGCTAGTTAACTTTATTGAG+TGG | 0.551550 | 7.4:+1333599 | MS.gene22813:CDS |
| GAGATAATCACACTTCAAGT+AGG | 0.563529 | 7.4:+1330252 | MS.gene22813:CDS |
| AATAATATGATGACAGGAGA+GGG | 0.566951 | 7.4:+1334406 | MS.gene22813:CDS |
| AGATGGCAGTGACAGTCTTG+AGG | 0.567168 | 7.4:+1331799 | MS.gene22813:CDS |
| CTAGTTAACTTTATTGAGTG+GGG | 0.569176 | 7.4:+1333601 | MS.gene22813:CDS |
| TGTCATGAGGAGACTTCTGC+AGG | 0.571604 | 7.4:+1332858 | MS.gene22813:CDS |
| ACCTGACGTTCCACTGTCAG+AGG | 0.573775 | 7.4:-1332611 | None:intergenic |
| ATGTGGAAACCAGATCGGTA+TGG | 0.576564 | 7.4:+1330278 | MS.gene22813:CDS |
| CCAAATCAATCAATAAAGCA+CGG | 0.577216 | 7.4:-1330514 | None:intergenic |
| TTATGGTCTCTTCTTATGCA+CGG | 0.578464 | 7.4:+1332964 | MS.gene22813:CDS |
| CTATGTCATTCAATTGCTGG+AGG | 0.585953 | 7.4:+1331830 | MS.gene22813:CDS |
| TCCCCATTTGATATAATCTG+GGG | 0.589500 | 7.4:-1334294 | None:intergenic |
| TCGCATACCTGAATACTAGC+AGG | 0.597022 | 7.4:-1333625 | None:intergenic |
| TGCACTTAATAGAATTGCTG+TGG | 0.599504 | 7.4:+1332412 | MS.gene22813:CDS |
| GCTGGTAACAATTGGGCTAG+TGG | 0.599621 | 7.4:+1330626 | MS.gene22813:CDS |
| TTTGCTGTTTATTAGGTCAG+CGG | 0.602175 | 7.4:+1333944 | MS.gene22813:intron |
| ATAACGAAGAGTGGTTGTGC+TGG | 0.603190 | 7.4:-1332501 | None:intergenic |
| AGGAGAGGTTGACCCAACTC+AGG | 0.603351 | 7.4:+1333037 | MS.gene22813:CDS |
| ATATGTTCAAACTGCACACA+GGG | 0.604079 | 7.4:+1333764 | MS.gene22813:CDS |
| TCAATTCTGAATATCATCCA+AGG | 0.606426 | 7.4:+1333017 | MS.gene22813:CDS |
| AGACATCACAGTAGAAACTA+GGG | 0.607333 | 7.4:-1332477 | None:intergenic |
| GCCAGTACGATAAGTTGAGA+AGG | 0.608803 | 7.4:+1334020 | MS.gene22813:CDS |
| GACATTTACTGAAAAGGTGA+CGG | 0.609104 | 7.4:-1333994 | None:intergenic |
| TATTGATTGATTTGGAACCA+AGG | 0.610327 | 7.4:+1330522 | MS.gene22813:CDS |
| TCAAAAGTGAGTTATATGGT+TGG | 0.610753 | 7.4:-1332337 | None:intergenic |
| GAACATGGTATCAGCAAAGA+CGG | 0.611540 | 7.4:+1330324 | MS.gene22813:CDS |
| AAGCAACTTTGTCTCGAACA+TGG | 0.614017 | 7.4:+1330309 | MS.gene22813:CDS |
| AGGATACATGAATAATGACT+TGG | 0.619688 | 7.4:+1332526 | MS.gene22813:CDS |
| ATGATTGACAGAGAAGCAGA+TGG | 0.626844 | 7.4:+1331782 | MS.gene22813:CDS |
| TACATGAATAATGACTTGGT+TGG | 0.628614 | 7.4:+1332530 | MS.gene22813:CDS |
| CATATGTTCAAACTGCACAC+AGG | 0.630458 | 7.4:+1333763 | MS.gene22813:CDS |
| GTGTTGGAATCAAAGAGGCA+AGG | 0.634632 | 7.4:-1332556 | None:intergenic |
| TCCCCAGATTATATCAAATG+GGG | 0.635043 | 7.4:+1334293 | MS.gene22813:CDS |
| GGACAATGTGGAAACCAGAT+CGG | 0.636980 | 7.4:+1330273 | MS.gene22813:CDS |
| TTATATCAAATGGGGAATGG+AGG | 0.637675 | 7.4:+1334301 | MS.gene22813:CDS |
| TGTGTGCAGTTTGAACATAT+GGG | 0.640655 | 7.4:-1333761 | None:intergenic |
| GTGTGCAGTTTGAACATATG+GGG | 0.646116 | 7.4:-1333760 | None:intergenic |
| TATGTCATTCAATTGCTGGA+GGG | 0.647449 | 7.4:+1331831 | MS.gene22813:CDS |
| TGAAGTGTGATTATCTCTCG+AGG | 0.648860 | 7.4:-1330246 | None:intergenic |
| TCTGAATATCATCCAAGGAG+AGG | 0.649229 | 7.4:+1333022 | MS.gene22813:CDS |
| TTGATTCATCAAACTCTGAG+AGG | 0.650287 | 7.4:-1334226 | None:intergenic |
| ACACTTCAAGTAGGACAATG+TGG | 0.658903 | 7.4:+1330261 | MS.gene22813:CDS |
| GAATAATATGATGACAGGAG+AGG | 0.675044 | 7.4:+1334405 | MS.gene22813:CDS |
| TCTTGGTGTTGGAATCAAAG+AGG | 0.676873 | 7.4:-1332561 | None:intergenic |
| AGGTTCATGAGAGTTTGCAG+AGG | 0.683623 | 7.4:+1333563 | MS.gene22813:intron |
| GTATCCTGGATAACGAAGAG+TGG | 0.693788 | 7.4:-1332510 | None:intergenic |
| CCACTGTGCTTGATGTCATG+AGG | 0.693936 | 7.4:+1332845 | MS.gene22813:CDS |
| AAATCAATCAATAAAGCACG+GGG | 0.701160 | 7.4:-1330512 | None:intergenic |
| AATGGAGACAAGTGATGTGG+TGG | 0.707586 | 7.4:+1332313 | MS.gene22813:CDS |
| CCAAATGGAGACAAGTGATG+TGG | 0.730166 | 7.4:+1332310 | MS.gene22813:CDS |
| CCTCATGACATCAAGCACAG+TGG | 0.730325 | 7.4:-1332845 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATAATAAATAAAATTGCA+AGG | - | chr7.4:1331475-1331494 | None:intergenic | 10.0% |
| !! | TATAATAAATAAAATTGCAA+GGG | - | chr7.4:1331474-1331493 | None:intergenic | 10.0% |
| !! | TATTTATTATATAACTAGAA+AGG | + | chr7.4:1331483-1331502 | MS.gene22813:intron | 10.0% |
| !!! | AAATAATTTTAAAAAAACAC+AGG | - | chr7.4:1332163-1332182 | None:intergenic | 10.0% |
| !!! | ATAGTTTAACATATATTTTT+AGG | + | chr7.4:1333868-1333887 | MS.gene22813:intron | 10.0% |
| !!! | TTTATATTTTTTCTTTGTAT+AGG | + | chr7.4:1334378-1334397 | MS.gene22813:intron | 10.0% |
| !! | AAATTCTCAATAAAGTTAAA+GGG | - | chr7.4:1331931-1331950 | None:intergenic | 15.0% |
| !! | TGAAAATATTGATATGAAAT+TGG | - | chr7.4:1334100-1334119 | None:intergenic | 15.0% |
| !! | TTGTAGAATATTTAATAACT+TGG | - | chr7.4:1330953-1330972 | None:intergenic | 15.0% |
| !!! | AGATTAATTTCAATTTTTCA+AGG | - | chr7.4:1333374-1333393 | None:intergenic | 15.0% |
| !!! | TCAACTATTTTAAAATGTAA+GGG | + | chr7.4:1331636-1331655 | MS.gene22813:intron | 15.0% |
| !!! | TTAACATATATTTTTAGGAA+TGG | + | chr7.4:1333873-1333892 | MS.gene22813:intron | 15.0% |
| !! | AACTACAAATAACAAACAAA+TGG | - | chr7.4:1330760-1330779 | None:intergenic | 20.0% |
| !! | AATCATAATACAGTTTAGAA+AGG | - | chr7.4:1333523-1333542 | None:intergenic | 20.0% |
| !! | AATTCTCAATAAAGTTAAAG+GGG | - | chr7.4:1331930-1331949 | None:intergenic | 20.0% |
| !! | ATCATAATACAGTTTAGAAA+GGG | - | chr7.4:1333522-1333541 | None:intergenic | 20.0% |
| !! | CAAATTCTCAATAAAGTTAA+AGG | - | chr7.4:1331932-1331951 | None:intergenic | 20.0% |
| !! | GAATTGATATATATTTAGCT+TGG | - | chr7.4:1333004-1333023 | None:intergenic | 20.0% |
| !! | GATAAGCATAAAAATTAAGA+CGG | - | chr7.4:1333814-1333833 | None:intergenic | 20.0% |
| !! | TCTTCTATTAAAAAATACCA+CGG | - | chr7.4:1333173-1333192 | None:intergenic | 20.0% |
| !!! | GTCAACTATTTTAAAATGTA+AGG | + | chr7.4:1331635-1331654 | MS.gene22813:intron | 20.0% |
| !!! | TATGATTTTAATGTTCTCTA+TGG | + | chr7.4:1333536-1333555 | MS.gene22813:intron | 20.0% |
| !!! | TGGTATTTTTTAATAGAAGA+TGG | + | chr7.4:1333173-1333192 | MS.gene22813:intron | 20.0% |
| ! | AAACAAAAAAATGAAAAGCG+AGG | - | chr7.4:1334341-1334360 | None:intergenic | 25.0% |
| ! | AGGTTATCCATCTTAAATAT+AGG | - | chr7.4:1332118-1332137 | None:intergenic | 25.0% |
| ! | ATTAATTTCCAGCAAATTGT+CGG | - | chr7.4:1331977-1331996 | None:intergenic | 25.0% |
| ! | ATTCTCAATAAAGTTAAAGG+GGG | - | chr7.4:1331929-1331948 | None:intergenic | 25.0% |
| ! | CATCAAACTAAATATGAAAG+AGG | - | chr7.4:1333695-1333714 | None:intergenic | 25.0% |
| ! | CATTTAAAAAACACAAAACC+AGG | - | chr7.4:1331570-1331589 | None:intergenic | 25.0% |
| ! | CTTCACATGAAAAAACATAA+AGG | + | chr7.4:1331430-1331449 | MS.gene22813:intron | 25.0% |
| ! | GAAAAAACATAAAGGTTGAA+GGG | + | chr7.4:1331438-1331457 | MS.gene22813:intron | 25.0% |
| ! | GTGAGAAATATTTAAGCAAT+CGG | - | chr7.4:1332141-1332160 | None:intergenic | 25.0% |
| ! | TACGGAGGAAATATAAAATA+GGG | - | chr7.4:1332779-1332798 | None:intergenic | 25.0% |
| ! | TATATCCTGTCATTAGAAAA+TGG | - | chr7.4:1332589-1332608 | None:intergenic | 25.0% |
| ! | TCTCATGATTGTAAAGATTA+CGG | - | chr7.4:1330577-1330596 | None:intergenic | 25.0% |
| ! | TCTTAAATATAGGAAGTCAA+AGG | - | chr7.4:1332108-1332127 | None:intergenic | 25.0% |
| ! | TCTTTACAGGACAAAAATTT+AGG | - | chr7.4:1332692-1332711 | None:intergenic | 25.0% |
| ! | TGAAAAAACATAAAGGTTGA+AGG | + | chr7.4:1331437-1331456 | MS.gene22813:intron | 25.0% |
| ! | TGAAATTAATCTTCAACTGA+TGG | + | chr7.4:1333382-1333401 | MS.gene22813:intron | 25.0% |
| ! | TTAATGTTCTCTATGGATTT+AGG | + | chr7.4:1333543-1333562 | MS.gene22813:intron | 25.0% |
| ! | TTACGGAGGAAATATAAAAT+AGG | - | chr7.4:1332780-1332799 | None:intergenic | 25.0% |
| ! | TTGACTTCCTATATTTAAGA+TGG | + | chr7.4:1332108-1332127 | MS.gene22813:intron | 25.0% |
| !!! | AAATTGCTTTTAACGCATAA+TGG | + | chr7.4:1332058-1332077 | MS.gene22813:intron | 25.0% |
| !!! | AATATTTTTGTTGCTGATCA+TGG | + | chr7.4:1330596-1330615 | MS.gene22813:CDS | 25.0% |
| !!! | TGCTCGAAATATCATTTTTA+TGG | - | chr7.4:1332658-1332677 | None:intergenic | 25.0% |
| AAAAACTACCGTATTATGGA+AGG | - | chr7.4:1331539-1331558 | None:intergenic | 30.0% | |
| AAATAAAGAAGGAAACCAAG+AGG | - | chr7.4:1331155-1331174 | None:intergenic | 30.0% | |
| AAATCAATCAATAAAGCACG+GGG | - | chr7.4:1330515-1330534 | None:intergenic | 30.0% | |
| AAATGAGCTCAACAAATGAA+TGG | - | chr7.4:1333146-1333165 | None:intergenic | 30.0% | |
| AACTGAAACTGAGTTACAAA+AGG | + | chr7.4:1333113-1333132 | MS.gene22813:intron | 30.0% | |
| AAGAGACATTATTGAGAGTT+TGG | + | chr7.4:1334247-1334266 | MS.gene22813:CDS | 30.0% | |
| AAGTCATTATTCATGTATCC+TGG | - | chr7.4:1332527-1332546 | None:intergenic | 30.0% | |
| AATAATATGATGACAGGAGA+GGG | + | chr7.4:1334406-1334425 | MS.gene22813:CDS | 30.0% | |
| AATATCATCCGATCAGATTA+CGG | - | chr7.4:1332797-1332816 | None:intergenic | 30.0% | |
| AATATTGTCATTACCTGAGT+TGG | - | chr7.4:1333053-1333072 | None:intergenic | 30.0% | |
| AATCCCCAGATTATATCAAA+TGG | + | chr7.4:1334291-1334310 | MS.gene22813:CDS | 30.0% | |
| ACGGAGGAAATATAAAATAG+GGG | - | chr7.4:1332778-1332797 | None:intergenic | 30.0% | |
| ACTAGAGACTGAATACATAA+AGG | - | chr7.4:1331188-1331207 | None:intergenic | 30.0% | |
| ACTCAGTTTCAGTTAACAAA+TGG | - | chr7.4:1333107-1333126 | None:intergenic | 30.0% | |
| AGAAATATTTAAGCAATCGG+AGG | - | chr7.4:1332138-1332157 | None:intergenic | 30.0% | |
| AGAAGGAATAGAAATTAGAG+AGG | + | chr7.4:1331079-1331098 | MS.gene22813:intron | 30.0% | |
| AGATTATATCAAATGGGGAA+TGG | + | chr7.4:1334298-1334317 | MS.gene22813:CDS | 30.0% | |
| AGCTAGTTAACTTTATTGAG+TGG | + | chr7.4:1333599-1333618 | MS.gene22813:CDS | 30.0% | |
| AGGATACATGAATAATGACT+TGG | + | chr7.4:1332526-1332545 | MS.gene22813:CDS | 30.0% | |
| AGTGTCAAAAGTGAGTTATA+TGG | - | chr7.4:1332344-1332363 | None:intergenic | 30.0% | |
| AGTTCTCAATAACATAAGTC+TGG | + | chr7.4:1330875-1330894 | MS.gene22813:intron | 30.0% | |
| ATATTGTCATTACCTGAGTT+GGG | - | chr7.4:1333052-1333071 | None:intergenic | 30.0% | |
| ATCCCCAGATTATATCAAAT+GGG | + | chr7.4:1334292-1334311 | MS.gene22813:CDS | 30.0% | |
| ATGTGACGTTAATTAGAAGA+AGG | - | chr7.4:1333303-1333322 | None:intergenic | 30.0% | |
| ATTAAAGTAAGCATACCTGA+TGG | - | chr7.4:1330655-1330674 | None:intergenic | 30.0% | |
| ATTAATCTTACACTCAAGAG+CGG | + | chr7.4:1331991-1332010 | MS.gene22813:intron | 30.0% | |
| ATTCCCCATTTGATATAATC+TGG | - | chr7.4:1334299-1334318 | None:intergenic | 30.0% | |
| CAAAACAACAGAATCTTTAC+AGG | - | chr7.4:1332705-1332724 | None:intergenic | 30.0% | |
| CAAATCAATCAATAAAGCAC+GGG | - | chr7.4:1330516-1330535 | None:intergenic | 30.0% | |
| CCAAATCAATCAATAAAGCA+CGG | - | chr7.4:1330517-1330536 | None:intergenic | 30.0% | |
| CTAGTTAACTTTATTGAGTG+GGG | + | chr7.4:1333601-1333620 | MS.gene22813:CDS | 30.0% | |
| CTTTCTGTAGTTGTCTAAAA+AGG | - | chr7.4:1334053-1334072 | None:intergenic | 30.0% | |
| GAAACTTATATGATGTCCTA+AGG | - | chr7.4:1331898-1331917 | None:intergenic | 30.0% | |
| GAAGGAATAGAAATTAGAGA+GGG | + | chr7.4:1331080-1331099 | MS.gene22813:intron | 30.0% | |
| GAATGTTGAAGAAGACATAA+TGG | + | chr7.4:1331757-1331776 | MS.gene22813:CDS | 30.0% | |
| GAGAACTGGAAAAATAAAGA+AGG | - | chr7.4:1331166-1331185 | None:intergenic | 30.0% | |
| GCTAGTTAACTTTATTGAGT+GGG | + | chr7.4:1333600-1333619 | MS.gene22813:CDS | 30.0% | |
| GTACAAAAACTACCGTATTA+TGG | - | chr7.4:1331543-1331562 | None:intergenic | 30.0% | |
| GTTATTCCATTCATTTATGC+AGG | + | chr7.4:1332209-1332228 | MS.gene22813:intron | 30.0% | |
| TAGGAATGGTTATTATTCTG+AGG | + | chr7.4:1333887-1333906 | MS.gene22813:intron | 30.0% | |
| TCAAAAGTGAGTTATATGGT+TGG | - | chr7.4:1332340-1332359 | None:intergenic | 30.0% | |
| TCAAATTCAATCAATGACTC+TGG | + | chr7.4:1331354-1331373 | MS.gene22813:intron | 30.0% | |
| TCAATTCTGAATATCATCCA+AGG | + | chr7.4:1333017-1333036 | MS.gene22813:CDS | 30.0% | |
| TCAGCAAAATTAGTAGTGAA+TGG | + | chr7.4:1330983-1331002 | MS.gene22813:intron | 30.0% | |
| TCTCCTGTCATCATATTATT+CGG | - | chr7.4:1334406-1334425 | None:intergenic | 30.0% | |
| TGAATTCCATTAATAACCCT+TGG | - | chr7.4:1330542-1330561 | None:intergenic | 30.0% | |
| TGGTTGTTAATATCTGATCA+GGG | + | chr7.4:1331731-1331750 | MS.gene22813:intron | 30.0% | |
| TTATGGAGAAAATGACACAA+AGG | - | chr7.4:1332641-1332660 | None:intergenic | 30.0% | |
| TTCCCCATTTGATATAATCT+GGG | - | chr7.4:1334298-1334317 | None:intergenic | 30.0% | |
| ! | AGTGTCTTTTGCTTGTAAAT+TGG | + | chr7.4:1331205-1331224 | MS.gene22813:intron | 30.0% |
| ! | ATTCATTTGTTGAGCTCATT+TGG | + | chr7.4:1333145-1333164 | MS.gene22813:intron | 30.0% |
| ! | GAATTTGTTTGAGCAAATGT+TGG | - | chr7.4:1332458-1332477 | None:intergenic | 30.0% |
| ! | GATTTTCTTTAGCATGCTAA+TGG | + | chr7.4:1330904-1330923 | MS.gene22813:intron | 30.0% |
| ! | TGAGTGATGAGTTACATTTT+TGG | + | chr7.4:1331683-1331702 | MS.gene22813:intron | 30.0% |
| ! | TTTTTCCTAGTATTTGCCTT+AGG | + | chr7.4:1331879-1331898 | MS.gene22813:intron | 30.0% |
| !! | AATGGTTATTATTCTGAGGT+TGG | + | chr7.4:1333891-1333910 | MS.gene22813:intron | 30.0% |
| !! | ACAATCTTATCTTGCTTTTC+TGG | + | chr7.4:1333715-1333734 | MS.gene22813:intron | 30.0% |
| !! | ATTGATTGATTTGGAACCAA+GGG | + | chr7.4:1330523-1330542 | MS.gene22813:CDS | 30.0% |
| !! | TACATGAATAATGACTTGGT+TGG | + | chr7.4:1332530-1332549 | MS.gene22813:CDS | 30.0% |
| !! | TATTGATTGATTTGGAACCA+AGG | + | chr7.4:1330522-1330541 | MS.gene22813:CDS | 30.0% |
| !!! | ATTCTGTTGTTTTGTTGAAC+TGG | + | chr7.4:1332711-1332730 | MS.gene22813:intron | 30.0% |
| !!! | ATTTCTTTTTCAGCTTCTAC+TGG | + | chr7.4:1333254-1333273 | MS.gene22813:intron | 30.0% |
| AACGCATAATGGCTAAGAAT+TGG | + | chr7.4:1332069-1332088 | MS.gene22813:intron | 35.0% | |
| AAGGGAAGGAATATGTGTAA+GGG | + | chr7.4:1331043-1331062 | MS.gene22813:intron | 35.0% | |
| ACGCATAATGGCTAAGAATT+GGG | + | chr7.4:1332070-1332089 | MS.gene22813:intron | 35.0% | |
| AGACATCACAGTAGAAACTA+GGG | - | chr7.4:1332480-1332499 | None:intergenic | 35.0% | |
| AGTCACAATTCCTGTAATCA+AGG | + | chr7.4:1331024-1331043 | MS.gene22813:intron | 35.0% | |
| AGTCAGTGTATAAACTAAGG+AGG | - | chr7.4:1331239-1331258 | None:intergenic | 35.0% | |
| ATAGTTGACTAAGACTCCTA+TGG | - | chr7.4:1331624-1331643 | None:intergenic | 35.0% | |
| ATATGTTCAAACTGCACACA+GGG | + | chr7.4:1333764-1333783 | MS.gene22813:CDS | 35.0% | |
| ATATTCCTTCCCTTGATTAC+AGG | - | chr7.4:1331037-1331056 | None:intergenic | 35.0% | |
| ATCGTCAACCTTCCATAATA+CGG | + | chr7.4:1331528-1331547 | MS.gene22813:intron | 35.0% | |
| CAATCAGATGTAATGCAGAA+AGG | - | chr7.4:1333840-1333859 | None:intergenic | 35.0% | |
| CCATTCATTTATGCAGGTAT+GGG | + | chr7.4:1332215-1332234 | MS.gene22813:intron | 35.0% | |
| CGGAGGAAATATAAAATAGG+GGG | - | chr7.4:1332777-1332796 | None:intergenic | 35.0% | |
| CTCTATTGACATTAAGTTCC+TGG | + | chr7.4:1332928-1332947 | MS.gene22813:intron | 35.0% | |
| CTGAATACATAAAGGAGAAC+TGG | - | chr7.4:1331180-1331199 | None:intergenic | 35.0% | |
| GAACACTTACAGCAAACATT+GGG | - | chr7.4:1334078-1334097 | None:intergenic | 35.0% | |
| GAATAATATGATGACAGGAG+AGG | + | chr7.4:1334405-1334424 | MS.gene22813:CDS | 35.0% | |
| GACATTTACTGAAAAGGTGA+CGG | - | chr7.4:1333997-1334016 | None:intergenic | 35.0% | |
| GACTTGAGTATAAGATTGCT+TGG | - | chr7.4:1333347-1333366 | None:intergenic | 35.0% | |
| GAGATAATCACACTTCAAGT+AGG | + | chr7.4:1330252-1330271 | MS.gene22813:CDS | 35.0% | |
| GAGTTTGGTTGACGAATATA+AGG | + | chr7.4:1334262-1334281 | MS.gene22813:CDS | 35.0% | |
| GATCCGAATAATATGATGAC+AGG | + | chr7.4:1334400-1334419 | MS.gene22813:CDS | 35.0% | |
| GGAGGAAATATAAAATAGGG+GGG | - | chr7.4:1332776-1332795 | None:intergenic | 35.0% | |
| GTCACAATTCCTGTAATCAA+GGG | + | chr7.4:1331025-1331044 | MS.gene22813:intron | 35.0% | |
| GTCATTAGAAAATGGCATCT+TGG | - | chr7.4:1332581-1332600 | None:intergenic | 35.0% | |
| GTGGTTGTTAATATCTGATC+AGG | + | chr7.4:1331730-1331749 | MS.gene22813:intron | 35.0% | |
| GTTCTATGTCATTCAATTGC+TGG | + | chr7.4:1331827-1331846 | MS.gene22813:CDS | 35.0% | |
| TAATAAACAGCAAAGCACAC+AGG | - | chr7.4:1333938-1333957 | None:intergenic | 35.0% | |
| TAATCTTCAACTGATGGTTG+TGG | + | chr7.4:1333388-1333407 | MS.gene22813:intron | 35.0% | |
| TATGTCATTCAATTGCTGGA+GGG | + | chr7.4:1331831-1331850 | MS.gene22813:CDS | 35.0% | |
| TATTTCCTCCGTAATCTGAT+CGG | + | chr7.4:1332786-1332805 | MS.gene22813:intron | 35.0% | |
| TCAGATATTAACAACCACAC+AGG | - | chr7.4:1331728-1331747 | None:intergenic | 35.0% | |
| TCCATTCATTTATGCAGGTA+TGG | + | chr7.4:1332214-1332233 | MS.gene22813:intron | 35.0% | |
| TCCCCAGATTATATCAAATG+GGG | + | chr7.4:1334293-1334312 | MS.gene22813:CDS | 35.0% | |
| TCCCCATTTGATATAATCTG+GGG | - | chr7.4:1334297-1334316 | None:intergenic | 35.0% | |
| TCCTTAGTTTATACACTGAC+TGG | + | chr7.4:1331238-1331257 | MS.gene22813:intron | 35.0% | |
| TGCACTTAATAGAATTGCTG+TGG | + | chr7.4:1332412-1332431 | MS.gene22813:CDS | 35.0% | |
| TGCATTACATCTGATTGCAT+TGG | + | chr7.4:1333843-1333862 | MS.gene22813:intron | 35.0% | |
| TGTGTGCAGTTTGAACATAT+GGG | - | chr7.4:1333764-1333783 | None:intergenic | 35.0% | |
| TTAGTAGTGAATGGACAGAT+AGG | + | chr7.4:1330992-1331011 | MS.gene22813:intron | 35.0% | |
| TTATATCAAATGGGGAATGG+AGG | + | chr7.4:1334301-1334320 | MS.gene22813:CDS | 35.0% | |
| TTATCCTGTCCAATTGTCAT+TGG | - | chr7.4:1334203-1334222 | None:intergenic | 35.0% | |
| TTATGGTCTCTTCTTATGCA+CGG | + | chr7.4:1332964-1332983 | MS.gene22813:CDS | 35.0% | |
| TTGGAACCAAGGGTTATTAA+TGG | + | chr7.4:1330533-1330552 | MS.gene22813:CDS | 35.0% | |
| ! | ATTTTTGTTGCTGATCATGG+TGG | + | chr7.4:1330599-1330618 | MS.gene22813:CDS | 35.0% |
| ! | CCGTGCTTTATTGATTGATT+TGG | + | chr7.4:1330514-1330533 | MS.gene22813:CDS | 35.0% |
| ! | CCTTAGTTTATACACTGACT+GGG | + | chr7.4:1331239-1331258 | MS.gene22813:intron | 35.0% |
| ! | TAGTATGACTAGCCAACATA+AGG | - | chr7.4:1333970-1333989 | None:intergenic | 35.0% |
| ! | TCTTAATGCTGATTGTGTTG+TGG | + | chr7.4:1332376-1332395 | MS.gene22813:CDS | 35.0% |
| ! | TTGAACATATGGGGATTTTC+TGG | - | chr7.4:1333754-1333773 | None:intergenic | 35.0% |
| !! | ACAAGTGAAGCATTGTGTAA+TGG | - | chr7.4:1331326-1331345 | None:intergenic | 35.0% |
| !! | TCTTATCTTGCTTTTCTGGT+AGG | + | chr7.4:1333719-1333738 | MS.gene22813:intron | 35.0% |
| !! | TGTGTGCTTTGCTGTTTATT+AGG | + | chr7.4:1333937-1333956 | MS.gene22813:intron | 35.0% |
| !! | TTTGCTGTTTATTAGGTCAG+CGG | + | chr7.4:1333944-1333963 | MS.gene22813:intron | 35.0% |
| !!! | AGATGCCATTTTCTAATGAC+AGG | + | chr7.4:1332581-1332600 | MS.gene22813:CDS | 35.0% |
| !!! | GAACCAGTTTTTTGCTGTAT+CGG | - | chr7.4:1332268-1332287 | None:intergenic | 35.0% |
| AAGCAACTTTGTCTCGAACA+TGG | + | chr7.4:1330309-1330328 | MS.gene22813:CDS | 40.0% | |
| AAGGAATATGTGTAAGGGCA+AGG | + | chr7.4:1331048-1331067 | MS.gene22813:intron | 40.0% | |
| ACACTTCAAGTAGGACAATG+TGG | + | chr7.4:1330261-1330280 | MS.gene22813:CDS | 40.0% | |
| ATAACTAGAAAGGCCTCAGA+TGG | + | chr7.4:1331493-1331512 | MS.gene22813:intron | 40.0% | |
| ATCCTGATAGATCACTCCAT+AGG | + | chr7.4:1331605-1331624 | MS.gene22813:intron | 40.0% | |
| ATCGGATGATATTTCCTTGC+AGG | + | chr7.4:1332804-1332823 | MS.gene22813:intron | 40.0% | |
| ATGATTGACAGAGAAGCAGA+TGG | + | chr7.4:1331782-1331801 | MS.gene22813:CDS | 40.0% | |
| ATTGACATTAAGTTCCTGGC+AGG | + | chr7.4:1332932-1332951 | MS.gene22813:intron | 40.0% | |
| CAAGGGAAGGAATATGTGTA+AGG | + | chr7.4:1331042-1331061 | MS.gene22813:intron | 40.0% | |
| CAATTCCTGTAATCAAGGGA+AGG | + | chr7.4:1331029-1331048 | MS.gene22813:intron | 40.0% | |
| CACTTGTCTCCATTTGGTTA+GGG | - | chr7.4:1332307-1332326 | None:intergenic | 40.0% | |
| CAGACATCACAGTAGAAACT+AGG | - | chr7.4:1332481-1332500 | None:intergenic | 40.0% | |
| CATAATATTCTTTGCCTGCC+AGG | - | chr7.4:1332949-1332968 | None:intergenic | 40.0% | |
| CATATGTTCAAACTGCACAC+AGG | + | chr7.4:1333763-1333782 | MS.gene22813:CDS | 40.0% | |
| CCCAGTCAGTGTATAAACTA+AGG | - | chr7.4:1331242-1331261 | None:intergenic | 40.0% | |
| CCCATACCTGCATAAATGAA+TGG | - | chr7.4:1332218-1332237 | None:intergenic | 40.0% | |
| CTATGTCATTCAATTGCTGG+AGG | + | chr7.4:1331830-1331849 | MS.gene22813:CDS | 40.0% | |
| CTGATGCTACCAATGACAAT+TGG | + | chr7.4:1334191-1334210 | MS.gene22813:intron | 40.0% | |
| CTGGCAGGCAAAGAATATTA+TGG | + | chr7.4:1332947-1332966 | MS.gene22813:intron | 40.0% | |
| CTGTGTGCAGTTTGAACATA+TGG | - | chr7.4:1333765-1333784 | None:intergenic | 40.0% | |
| CTTAAGAACCGACAATTTGC+TGG | + | chr7.4:1331966-1331985 | MS.gene22813:intron | 40.0% | |
| GAAACCAAGAGGAGAAAGAT+CGG | - | chr7.4:1331144-1331163 | None:intergenic | 40.0% | |
| GAACATGGTATCAGCAAAGA+CGG | + | chr7.4:1330324-1330343 | MS.gene22813:CDS | 40.0% | |
| GAATCAATTGTGAACCTGTG+TGG | + | chr7.4:1331711-1331730 | MS.gene22813:intron | 40.0% | |
| GATATAATCTGGGGATTCAC+AGG | - | chr7.4:1334288-1334307 | None:intergenic | 40.0% | |
| GATGTCCTAAGGCAAATACT+AGG | - | chr7.4:1331887-1331906 | None:intergenic | 40.0% | |
| GGAACACTTACAGCAAACAT+TGG | - | chr7.4:1334079-1334098 | None:intergenic | 40.0% | |
| GGCTCAGACATTTACTGAAA+AGG | - | chr7.4:1334003-1334022 | None:intergenic | 40.0% | |
| GGTCATTCAGAGTCTCTAAA+AGG | - | chr7.4:1332247-1332266 | None:intergenic | 40.0% | |
| GTGTGCAGTTTGAACATATG+GGG | - | chr7.4:1333763-1333782 | None:intergenic | 40.0% | |
| TCAAGAGCGGAAATTGAACA+GGG | + | chr7.4:1332004-1332023 | MS.gene22813:intron | 40.0% | |
| TCACTTGTCTCCATTTGGTT+AGG | - | chr7.4:1332308-1332327 | None:intergenic | 40.0% | |
| TCCTTCTCAACTTATCGTAC+TGG | - | chr7.4:1334024-1334043 | None:intergenic | 40.0% | |
| TCTGAATATCATCCAAGGAG+AGG | + | chr7.4:1333022-1333041 | MS.gene22813:CDS | 40.0% | |
| TGAAGTGTGATTATCTCTCG+AGG | - | chr7.4:1330249-1330268 | None:intergenic | 40.0% | |
| TGACCGATACAGCAAAAAAC+TGG | + | chr7.4:1332262-1332281 | MS.gene22813:CDS | 40.0% | |
| ! | AAGTCTTATCCGACTAAGTG+AGG | - | chr7.4:1330694-1330713 | None:intergenic | 40.0% |
| ! | ACGAATTACATTAGCCTGCA+AGG | - | chr7.4:1332821-1332840 | None:intergenic | 40.0% |
| ! | AGAAAATGGCATCTTGGTGT+TGG | - | chr7.4:1332575-1332594 | None:intergenic | 40.0% |
| ! | GGTAGTTTTTGTACAGTACC+TGG | + | chr7.4:1331549-1331568 | MS.gene22813:intron | 40.0% |
| ! | TTTATACACTGACTGGGAGT+TGG | + | chr7.4:1331245-1331264 | MS.gene22813:intron | 40.0% |
| !! | TCTTGGTGTTGGAATCAAAG+AGG | - | chr7.4:1332564-1332583 | None:intergenic | 40.0% |
| !! | TTTAGCTTGGCTAGCATCTT+TGG | - | chr7.4:1332991-1333010 | None:intergenic | 40.0% |
| AAGAGCGGAAATTGAACAGG+GGG | + | chr7.4:1332006-1332025 | MS.gene22813:intron | 45.0% | |
| AAGGTTGACGATGTTCCTGT+CGG | - | chr7.4:1331520-1331539 | None:intergenic | 45.0% | |
| AATGGAGACAAGTGATGTGG+TGG | + | chr7.4:1332313-1332332 | MS.gene22813:CDS | 45.0% | |
| ACAACCACTCTTCGTTATCC+AGG | + | chr7.4:1332506-1332525 | MS.gene22813:CDS | 45.0% | |
| ACCAGATCGGTATGGAATTC+TGG | + | chr7.4:1330286-1330305 | MS.gene22813:CDS | 45.0% | |
| AGGGCAAGGTGTATAAGAGA+AGG | + | chr7.4:1331062-1331081 | MS.gene22813:intron | 45.0% | |
| AGGTTCATGAGAGTTTGCAG+AGG | + | chr7.4:1333563-1333582 | MS.gene22813:intron | 45.0% | |
| ATAACGAAGAGTGGTTGTGC+TGG | - | chr7.4:1332504-1332523 | None:intergenic | 45.0% | |
| ATCAAATGGGGAATGGAGGT+AGG | + | chr7.4:1334305-1334324 | MS.gene22813:intron | 45.0% | |
| ATCATCCGATCAGATTACGG+AGG | - | chr7.4:1332794-1332813 | None:intergenic | 45.0% | |
| ATGTGGAAACCAGATCGGTA+TGG | + | chr7.4:1330278-1330297 | MS.gene22813:CDS | 45.0% | |
| CAAGAGCGGAAATTGAACAG+GGG | + | chr7.4:1332005-1332024 | MS.gene22813:intron | 45.0% | |
| CAATCAATGACTCTGGTGTC+TGG | + | chr7.4:1331361-1331380 | MS.gene22813:intron | 45.0% | |
| CAGTGTGTTCCCTAACCAAA+TGG | + | chr7.4:1332295-1332314 | MS.gene22813:CDS | 45.0% | |
| CCAAATGGAGACAAGTGATG+TGG | + | chr7.4:1332310-1332329 | MS.gene22813:CDS | 45.0% | |
| CCACATCACTTGTCTCCATT+TGG | - | chr7.4:1332313-1332332 | None:intergenic | 45.0% | |
| CTCAAGAGCGGAAATTGAAC+AGG | + | chr7.4:1332003-1332022 | MS.gene22813:intron | 45.0% | |
| CTCCTATGGAGTGATCTATC+AGG | - | chr7.4:1331610-1331629 | None:intergenic | 45.0% | |
| CTTATCCGACTAAGTGAGGT+CGG | - | chr7.4:1330690-1330709 | None:intergenic | 45.0% | |
| GCATCTGTTCTGTACTTGGA+TGG | + | chr7.4:1334137-1334156 | MS.gene22813:intron | 45.0% | |
| GCTACCAATGACAATTGGAC+AGG | + | chr7.4:1334196-1334215 | MS.gene22813:intron | 45.0% | |
| GGACAATGTGGAAACCAGAT+CGG | + | chr7.4:1330273-1330292 | MS.gene22813:CDS | 45.0% | |
| GGGTGTGAATTATGTGAGGA+TGG | + | chr7.4:1331100-1331119 | MS.gene22813:intron | 45.0% | |
| GTATCCTGGATAACGAAGAG+TGG | - | chr7.4:1332513-1332532 | None:intergenic | 45.0% | |
| GTATTCAGGTATGCGATCTG+TGG | + | chr7.4:1333632-1333651 | MS.gene22813:intron | 45.0% | |
| GTGTTGGAATCAAAGAGGCA+AGG | - | chr7.4:1332559-1332578 | None:intergenic | 45.0% | |
| TCCAGAATTCCATACCGATC+TGG | - | chr7.4:1330290-1330309 | None:intergenic | 45.0% | |
| TCGCATACCTGAATACTAGC+AGG | - | chr7.4:1333628-1333647 | None:intergenic | 45.0% | |
| TGCTGCATCTGTTCTGTACT+TGG | + | chr7.4:1334133-1334152 | MS.gene22813:intron | 45.0% | |
| TTATCCGACTAAGTGAGGTC+GGG | - | chr7.4:1330689-1330708 | None:intergenic | 45.0% | |
| TTTGTTGCTGATCATGGTGG+TGG | + | chr7.4:1330602-1330621 | MS.gene22813:CDS | 45.0% | |
| ! | ACTATTTTACCCATGCTCGC+TGG | + | chr7.4:1330429-1330448 | MS.gene22813:intron | 45.0% |
| ! | GAGAGGGTGTGAATTATGTG+AGG | + | chr7.4:1331096-1331115 | MS.gene22813:intron | 45.0% |
| ! | GCCAGTACGATAAGTTGAGA+AGG | + | chr7.4:1334020-1334039 | MS.gene22813:CDS | 45.0% |
| !! | TGGTGGTGCTGGTAACAATT+GGG | + | chr7.4:1330619-1330638 | MS.gene22813:CDS | 45.0% |
| ACTAAGTGAGGTCGGGTACA+TGG | - | chr7.4:1330682-1330701 | None:intergenic | 50.0% | |
| AGAGCGGAAATTGAACAGGG+GGG | + | chr7.4:1332007-1332026 | MS.gene22813:intron | 50.0% | |
| AGATGGCAGTGACAGTCTTG+AGG | + | chr7.4:1331799-1331818 | MS.gene22813:CDS | 50.0% | |
| AGGATATACGCCTCTGACAG+TGG | + | chr7.4:1332601-1332620 | MS.gene22813:CDS | 50.0% | |
| CAAGAGGAGAAAGATCGGAG+AGG | - | chr7.4:1331139-1331158 | None:intergenic | 50.0% | |
| CATTCAATTGCTGGAGGGAC+AGG | + | chr7.4:1331836-1331855 | MS.gene22813:CDS | 50.0% | |
| CCACTGTGCTTGATGTCATG+AGG | + | chr7.4:1332845-1332864 | MS.gene22813:CDS | 50.0% | |
| CCTCATGACATCAAGCACAG+TGG | - | chr7.4:1332848-1332867 | None:intergenic | 50.0% | |
| CCTCGAAGATTTCGCTACTC+AGG | + | chr7.4:1330350-1330369 | MS.gene22813:CDS | 50.0% | |
| CCTGAGTAGCGAAATCTTCG+AGG | - | chr7.4:1330353-1330372 | None:intergenic | 50.0% | |
| CTCTCCGATCTTTCTCCTCT+TGG | + | chr7.4:1331137-1331156 | MS.gene22813:intron | 50.0% | |
| GACTCTGGTGTCTGGTCTAT+TGG | + | chr7.4:1331369-1331388 | MS.gene22813:intron | 50.0% | |
| GATGGCAGTGACAGTCTTGA+GGG | + | chr7.4:1331800-1331819 | MS.gene22813:CDS | 50.0% | |
| GTTCAAACTGCACACAGGGT+AGG | + | chr7.4:1333768-1333787 | MS.gene22813:intron | 50.0% | |
| GTTGAGCTCATTTGGTACCG+TGG | + | chr7.4:1333153-1333172 | MS.gene22813:intron | 50.0% | |
| TGTACCCGACCTCACTTAGT+CGG | + | chr7.4:1330682-1330701 | MS.gene22813:intron | 50.0% | |
| TGTCATGAGGAGACTTCTGC+AGG | + | chr7.4:1332858-1332877 | MS.gene22813:CDS | 50.0% | |
| ! | GAGGCAAAAGTATGCAGCTG+TGG | - | chr7.4:1333676-1333695 | None:intergenic | 50.0% |
| ! | GCTGGTAACAATTGGGCTAG+TGG | + | chr7.4:1330626-1330645 | MS.gene22813:CDS | 50.0% |
| ! | TTAGGTCAGCGGCCTTATGT+TGG | + | chr7.4:1333955-1333974 | MS.gene22813:intron | 50.0% |
| !! | GTGGTGGTGCTGGTAACAAT+TGG | + | chr7.4:1330618-1330637 | MS.gene22813:CDS | 50.0% |
| ACCTGACGTTCCACTGTCAG+AGG | - | chr7.4:1332614-1332633 | None:intergenic | 55.0% | |
| AGGAGAGGTTGACCCAACTC+AGG | + | chr7.4:1333037-1333056 | MS.gene22813:CDS | 55.0% | |
| AGTGAGGTCGGGTACATGGA+TGG | - | chr7.4:1330678-1330697 | None:intergenic | 55.0% | |
| GAGCGGAAATTGAACAGGGG+GGG | + | chr7.4:1332008-1332027 | MS.gene22813:intron | 55.0% | |
| GAGTTGGGTCAACCTCTCCT+TGG | - | chr7.4:1333037-1333056 | None:intergenic | 55.0% | |
| GTGGGGTCCTGCTAGTATTC+AGG | + | chr7.4:1333618-1333637 | MS.gene22813:CDS | 55.0% | |
| TGTTCCTGTCGGACCATCTG+AGG | - | chr7.4:1331509-1331528 | None:intergenic | 55.0% | |
| !! | TTGGGCTAGTGGCTACCATC+AGG | + | chr7.4:1330637-1330656 | MS.gene22813:CDS | 55.0% |
| AAGGCCTCAGATGGTCCGAC+AGG | + | chr7.4:1331502-1331521 | MS.gene22813:intron | 60.0% | |
| ATTGCTGGAGGGACAGGCTC+AGG | + | chr7.4:1331842-1331861 | MS.gene22813:CDS | 60.0% | |
| GCCTCTGACAGTGGAACGTC+AGG | + | chr7.4:1332610-1332629 | MS.gene22813:CDS | 60.0% | |
| !! | GCTGATCATGGTGGTGGTGC+TGG | + | chr7.4:1330608-1330627 | MS.gene22813:CDS | 60.0% |
| ACAGGAGAGGGCAGTGCTGC+AGG | + | chr7.4:1334418-1334437 | MS.gene22813:CDS | 65.0% | |
| GGGCAGTGCTGCAGGATCAC+TGG | + | chr7.4:1334426-1334445 | MS.gene22813:CDS | 65.0% | |
| TCCCTGCAGCCAGCGAGCAT+GGG | - | chr7.4:1330441-1330460 | None:intergenic | 65.0% | |
| ! | ACCCATGCTCGCTGGCTGCA+GGG | + | chr7.4:1330437-1330456 | MS.gene22813:intron | 65.0% |
| ! | TACCCATGCTCGCTGGCTGC+AGG | + | chr7.4:1330436-1330455 | MS.gene22813:intron | 65.0% |
| CTCCCTGCAGCCAGCGAGCA+TGG | - | chr7.4:1330442-1330461 | None:intergenic | 70.0% | |
| ! | CATGCTCGCTGGCTGCAGGG+AGG | + | chr7.4:1330440-1330459 | MS.gene22813:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.4 | gene | 1330243 | 1334468 | 1330243 | ID=MS.gene22813 |
| chr7.4 | mRNA | 1330243 | 1334468 | 1330243 | ID=MS.gene22813.t1;Parent=MS.gene22813 |
| chr7.4 | exon | 1330243 | 1330371 | 1330243 | ID=MS.gene22813.t1.exon1;Parent=MS.gene22813.t1 |
| chr7.4 | CDS | 1330243 | 1330371 | 1330243 | ID=cds.MS.gene22813.t1;Parent=MS.gene22813.t1 |
| chr7.4 | exon | 1330458 | 1330658 | 1330458 | ID=MS.gene22813.t1.exon2;Parent=MS.gene22813.t1 |
| chr7.4 | CDS | 1330458 | 1330658 | 1330458 | ID=cds.MS.gene22813.t1;Parent=MS.gene22813.t1 |
| chr7.4 | exon | 1331752 | 1331863 | 1331752 | ID=MS.gene22813.t1.exon3;Parent=MS.gene22813.t1 |
| chr7.4 | CDS | 1331752 | 1331863 | 1331752 | ID=cds.MS.gene22813.t1;Parent=MS.gene22813.t1 |
| chr7.4 | exon | 1332231 | 1332631 | 1332231 | ID=MS.gene22813.t1.exon4;Parent=MS.gene22813.t1 |
| chr7.4 | CDS | 1332231 | 1332631 | 1332231 | ID=cds.MS.gene22813.t1;Parent=MS.gene22813.t1 |
| chr7.4 | exon | 1332826 | 1332879 | 1332826 | ID=MS.gene22813.t1.exon5;Parent=MS.gene22813.t1 |
| chr7.4 | CDS | 1332826 | 1332879 | 1332826 | ID=cds.MS.gene22813.t1;Parent=MS.gene22813.t1 |
| chr7.4 | exon | 1332954 | 1333058 | 1332954 | ID=MS.gene22813.t1.exon6;Parent=MS.gene22813.t1 |
| chr7.4 | CDS | 1332954 | 1333058 | 1332954 | ID=cds.MS.gene22813.t1;Parent=MS.gene22813.t1 |
| chr7.4 | exon | 1333565 | 1333639 | 1333565 | ID=MS.gene22813.t1.exon7;Parent=MS.gene22813.t1 |
| chr7.4 | CDS | 1333565 | 1333639 | 1333565 | ID=cds.MS.gene22813.t1;Parent=MS.gene22813.t1 |
| chr7.4 | exon | 1333741 | 1333785 | 1333741 | ID=MS.gene22813.t1.exon8;Parent=MS.gene22813.t1 |
| chr7.4 | CDS | 1333741 | 1333785 | 1333741 | ID=cds.MS.gene22813.t1;Parent=MS.gene22813.t1 |
| chr7.4 | exon | 1333959 | 1334087 | 1333959 | ID=MS.gene22813.t1.exon9;Parent=MS.gene22813.t1 |
| chr7.4 | CDS | 1333959 | 1334087 | 1333959 | ID=cds.MS.gene22813.t1;Parent=MS.gene22813.t1 |
| chr7.4 | exon | 1334218 | 1334322 | 1334218 | ID=MS.gene22813.t1.exon10;Parent=MS.gene22813.t1 |
| chr7.4 | CDS | 1334218 | 1334322 | 1334218 | ID=cds.MS.gene22813.t1;Parent=MS.gene22813.t1 |
| chr7.4 | exon | 1334400 | 1334468 | 1334400 | ID=MS.gene22813.t1.exon11;Parent=MS.gene22813.t1 |
| chr7.4 | CDS | 1334400 | 1334468 | 1334400 | ID=cds.MS.gene22813.t1;Parent=MS.gene22813.t1 |
| Gene Sequence |
| Protein sequence |
