Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene031871.t1 | XP_003601071.1 | 98 | 452 | 8 | 1 | 1 | 451 | 1 | 452 | 3.20E-252 | 880.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene031871.t1 | Q680U9 | 74.9 | 450 | 113 | 0 | 1 | 450 | 1 | 450 | 1.1e-200 | 700.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene031871.t1 | G7J329 | 98.0 | 452 | 8 | 1 | 1 | 451 | 1 | 452 | 2.3e-252 | 880.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene031871 | MS.gene89597 | PPI |
| MS.gene031871 | MS.gene012032 | PPI |
| MS.gene032967 | MS.gene031871 | PPI |
| MS.gene031871 | MS.gene76435 | PPI |
| MS.gene031871 | MS.gene038754 | PPI |
| MS.gene031871 | MS.gene80729 | PPI |
| MS.gene031871 | MS.gene044565 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene031871.t1 | MTR_3g072660 | 98.009 | 452 | 8 | 1 | 1 | 451 | 1 | 452 | 0.0 | 915 |
| MS.gene031871.t1 | MTR_4g088935 | 96.674 | 451 | 15 | 0 | 1 | 451 | 1 | 451 | 0.0 | 904 |
| MS.gene031871.t1 | MTR_3g072660 | 96.460 | 452 | 8 | 2 | 1 | 451 | 1 | 445 | 0.0 | 894 |
| MS.gene031871.t1 | MTR_3g072660 | 98.177 | 384 | 6 | 1 | 1 | 383 | 1 | 384 | 0.0 | 776 |
| MS.gene031871.t1 | MTR_3g072660 | 96.354 | 384 | 6 | 2 | 1 | 383 | 1 | 377 | 0.0 | 753 |
| MS.gene031871.t1 | MTR_3g072660 | 98.039 | 357 | 6 | 1 | 1 | 356 | 1 | 357 | 0.0 | 719 |
| MS.gene031871.t1 | MTR_3g072660 | 98.777 | 327 | 4 | 0 | 125 | 451 | 1 | 327 | 0.0 | 672 |
| MS.gene031871.t1 | MTR_3g072660 | 96.636 | 327 | 4 | 1 | 125 | 451 | 1 | 320 | 0.0 | 650 |
| MS.gene031871.t1 | MTR_3g072660 | 97.980 | 297 | 5 | 1 | 1 | 296 | 1 | 297 | 0.0 | 595 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene031871.t1 | AT4G17020 | 74.889 | 450 | 113 | 0 | 1 | 450 | 1 | 450 | 0.0 | 726 |
| MS.gene031871.t1 | AT4G17020 | 74.889 | 450 | 113 | 0 | 1 | 450 | 1 | 450 | 0.0 | 725 |
| MS.gene031871.t1 | AT4G17020 | 74.889 | 450 | 113 | 0 | 1 | 450 | 1 | 450 | 0.0 | 724 |
Find 92 sgRNAs with CRISPR-Local
Find 315 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAAGAAGAGCTTATGTTTA+AGG | 0.129241 | 3.3:-63013210 | None:intergenic |
| GAGAATGGAATGGTTTATTA+TGG | 0.208075 | 3.3:+63016645 | MS.gene031871:CDS |
| AAGCCACTCTCGGTTAATTT+TGG | 0.210672 | 3.3:-63013397 | None:intergenic |
| TGTAGCTTTCTTACTACTTT+TGG | 0.229854 | 3.3:-63016739 | None:intergenic |
| ACCTGTGCCGGCTAAGTTAT+TGG | 0.271234 | 3.3:+63011809 | MS.gene031871:CDS |
| CAAAGTTGCCATTGATAGAT+TGG | 0.301692 | 3.3:+63011866 | MS.gene031871:CDS |
| ATTTCAAAGGAACATAATTA+AGG | 0.304580 | 3.3:+63013897 | MS.gene031871:CDS |
| AATTATGTTCCTTTGAAATT+CGG | 0.328396 | 3.3:-63013893 | None:intergenic |
| GATCATTGCCAAGAATTTCA+TGG | 0.333040 | 3.3:+63011252 | MS.gene031871:CDS |
| CAGGCACTGCTGGTACCCTC+TGG | 0.335293 | 3.3:-63016340 | None:intergenic |
| CACCATGTCCATGAAATTCT+TGG | 0.335342 | 3.3:-63011260 | None:intergenic |
| CAACTTCCAAATCTTATTGT+TGG | 0.350456 | 3.3:+63015814 | MS.gene031871:CDS |
| AGATTCAAAGAAGATGCTTT+TGG | 0.356097 | 3.3:+63016670 | MS.gene031871:CDS |
| ATAGCTCCAACAATAAGATT+TGG | 0.356315 | 3.3:-63015820 | None:intergenic |
| CACAACTTTGGTACATCATC+AGG | 0.365045 | 3.3:+63013529 | MS.gene031871:CDS |
| GTAGAGTTTATCAAGTTTGA+TGG | 0.368766 | 3.3:-63011296 | None:intergenic |
| TGTGAGGCTCCCAACCTTAG+AGG | 0.379390 | 3.3:+63012929 | MS.gene031871:CDS |
| GGCTAAGTTATTGGAGGAAT+GGG | 0.394224 | 3.3:+63011818 | MS.gene031871:CDS |
| TTACAGTTATTGCATATTGA+TGG | 0.396001 | 3.3:+63011786 | MS.gene031871:CDS |
| AGAATGGAATGGTTTATTAT+GGG | 0.397970 | 3.3:+63016646 | MS.gene031871:CDS |
| TGGGCTGGTCAAACTTCAAC+AGG | 0.402831 | 3.3:+63013933 | MS.gene031871:CDS |
| TTGTGCTTTGAAAGACCATC+TGG | 0.405073 | 3.3:-63011846 | None:intergenic |
| ATAAGTCTCAAGATCCTCTA+AGG | 0.406525 | 3.3:-63012943 | None:intergenic |
| ACCCATGTACTAAAAGATTC+TGG | 0.421490 | 3.3:-63012533 | None:intergenic |
| AAATCAAAATGCCTGAGGTT+AGG | 0.443637 | 3.3:+63011230 | None:intergenic |
| TAATAAACCATTCCATTCTC+TGG | 0.444435 | 3.3:-63016642 | None:intergenic |
| GCCTGAAAATGTCACAGATC+AGG | 0.448319 | 3.3:+63016358 | MS.gene031871:CDS |
| TTAAGGACCTTGCAGACCTT+GGG | 0.454174 | 3.3:+63013914 | MS.gene031871:CDS |
| CTTGATAAACTCTACGAGAA+TGG | 0.454631 | 3.3:+63011304 | MS.gene031871:CDS |
| ATTAAGGACCTTGCAGACCT+TGG | 0.455377 | 3.3:+63013913 | MS.gene031871:CDS |
| GACTTATGCTCTGGAACAAT+GGG | 0.456255 | 3.3:+63012959 | MS.gene031871:CDS |
| CCTGTGACTGCGCCAGAGAA+TGG | 0.466571 | 3.3:+63016630 | MS.gene031871:CDS |
| CGGCTAAGTTATTGGAGGAA+TGG | 0.470454 | 3.3:+63011817 | MS.gene031871:CDS |
| TCCAATAACTTAGCCGGCAC+AGG | 0.471035 | 3.3:-63011810 | None:intergenic |
| TGCAGATAGTCAGTTTCCTT+CGG | 0.477880 | 3.3:+63016294 | MS.gene031871:intron |
| AGCCTCACAGTAATATTAGA+AGG | 0.477881 | 3.3:-63012915 | None:intergenic |
| TCAAAGTTGCTTACCCTGGA+TGG | 0.478380 | 3.3:-63016521 | None:intergenic |
| AAGGTCTTGTCAACATGACT+TGG | 0.480094 | 3.3:-63013191 | None:intergenic |
| TATAGGGCAGGAAAGAAAGT+TGG | 0.482264 | 3.3:+63014081 | MS.gene031871:intron |
| GTCTCAAGATCCTCTAAGGT+TGG | 0.483810 | 3.3:-63012939 | None:intergenic |
| AGACTTATGCTCTGGAACAA+TGG | 0.494366 | 3.3:+63012958 | MS.gene031871:CDS |
| TGGATACAAATGCACAACTT+TGG | 0.500692 | 3.3:+63013517 | MS.gene031871:CDS |
| TCTCAAGATCCTCTAAGGTT+GGG | 0.504105 | 3.3:-63012938 | None:intergenic |
| TGAATCATCATCAAGAAAAG+AGG | 0.506736 | 3.3:+63014148 | MS.gene031871:CDS |
| AGTTTATCAAGTTTGATGGC+AGG | 0.511969 | 3.3:-63011292 | None:intergenic |
| CAATTGAACCAATCTATCAA+TGG | 0.514654 | 3.3:-63011874 | None:intergenic |
| GTAAACAGAACCTCTGACTC+AGG | 0.517111 | 3.3:-63013256 | None:intergenic |
| TCATCTGCGAAGCTATTCTC+AGG | 0.522090 | 3.3:+63011329 | MS.gene031871:CDS |
| AGGCACTGCTGGTACCCTCT+GGG | 0.522718 | 3.3:-63016339 | None:intergenic |
| CATTCCTCCAATAACTTAGC+CGG | 0.523734 | 3.3:-63011816 | None:intergenic |
| TGCCAAGAATTTCATGGACA+TGG | 0.531687 | 3.3:+63011258 | MS.gene031871:CDS |
| GGATCTTGAGACTTATGCTC+TGG | 0.535259 | 3.3:+63012950 | MS.gene031871:CDS |
| CCATTCTCTGGCGCAGTCAC+AGG | 0.535410 | 3.3:-63016630 | None:intergenic |
| GTGGTGACAGATTAGGTTGT+GGG | 0.535695 | 3.3:+63016445 | MS.gene031871:intron |
| GGACCTTGCAGACCTTGGGC+TGG | 0.536902 | 3.3:+63013918 | MS.gene031871:CDS |
| CAGGAGAGAGGTGTTGATGC+TGG | 0.539060 | 3.3:+63013650 | MS.gene031871:intron |
| GTGTGGCAGGATGTATTTGA+AGG | 0.539271 | 3.3:+63016605 | MS.gene031871:intron |
| TCTGACTCAGGAGACGCCGC+TGG | 0.540398 | 3.3:-63013244 | None:intergenic |
| AGGTCTTGTCAACATGACTT+GGG | 0.547217 | 3.3:-63013190 | None:intergenic |
| CAATGGCATTACAGCAGACC+AGG | 0.547595 | 3.3:+63015873 | MS.gene031871:CDS |
| ATTATGACGAGTTCCCATCC+AGG | 0.551997 | 3.3:+63016507 | MS.gene031871:CDS |
| TCATCCTCGTGTTGCCCAGA+GGG | 0.558131 | 3.3:+63016325 | MS.gene031871:CDS |
| ACACATTGACCGAATTTCAA+AGG | 0.563272 | 3.3:+63013884 | MS.gene031871:CDS |
| AATTACACTGTGAGATATTG+CGG | 0.567848 | 3.3:+63015474 | MS.gene031871:CDS |
| CAAAGTTGCTTACCCTGGAT+GGG | 0.570298 | 3.3:-63016520 | None:intergenic |
| ATTCAGTCATGCTCACTGAA+AGG | 0.573028 | 3.3:-63014130 | None:intergenic |
| AACACATACTTCTTTGCAAG+AGG | 0.573329 | 3.3:-63011765 | None:intergenic |
| TTAGAAGGCATTGATTCCCT+CGG | 0.574898 | 3.3:-63012900 | None:intergenic |
| TGACTTGATATCATTCATGC+TGG | 0.584712 | 3.3:+63013673 | MS.gene031871:CDS |
| TTGGCAATGATCCTAACCTC+AGG | 0.587350 | 3.3:-63011241 | None:intergenic |
| GGTGGTGACAGATTAGGTTG+TGG | 0.588257 | 3.3:+63016444 | MS.gene031871:intron |
| GCATATTGATGGACCTGTGC+CGG | 0.588398 | 3.3:+63011797 | MS.gene031871:CDS |
| AGCGGCGTCTCCTGAGTCAG+AGG | 0.589108 | 3.3:+63013246 | MS.gene031871:CDS |
| GAGGAATGGGTGCTTCCAGA+TGG | 0.595776 | 3.3:+63011831 | MS.gene031871:CDS |
| GAGGATGAGCATTCTGCCGA+AGG | 0.597208 | 3.3:-63016310 | None:intergenic |
| GTTGAAGTTTGACCAGCCCA+AGG | 0.597505 | 3.3:-63013930 | None:intergenic |
| GCTCCAAAATTAACCGAGAG+TGG | 0.597554 | 3.3:+63013394 | MS.gene031871:CDS |
| CAAGAATTTCATGGACATGG+TGG | 0.599325 | 3.3:+63011261 | MS.gene031871:CDS |
| TTATGACGAGTTCCCATCCA+GGG | 0.606538 | 3.3:+63016508 | MS.gene031871:CDS |
| TGTGCCGGCTAAGTTATTGG+AGG | 0.608812 | 3.3:+63011812 | MS.gene031871:CDS |
| ACATACTTCTTTGCAAGAGG+CGG | 0.608895 | 3.3:-63011762 | None:intergenic |
| TGACCAGCCCAAGGTCTGCA+AGG | 0.612502 | 3.3:-63013921 | None:intergenic |
| TTATGCTCTGGAACAATGGG+AGG | 0.625310 | 3.3:+63012962 | MS.gene031871:CDS |
| CTCATCCTCGTGTTGCCCAG+AGG | 0.632190 | 3.3:+63016324 | MS.gene031871:CDS |
| GGAATATATCACTAATTCTG+AGG | 0.632294 | 3.3:+63013551 | MS.gene031871:CDS |
| TGGCAGTGGAACTTTGCCGA+GGG | 0.654665 | 3.3:+63012884 | MS.gene031871:intron |
| ATGGCAGTGGAACTTTGCCG+AGG | 0.657791 | 3.3:+63012883 | MS.gene031871:intron |
| GGTACCCTCTGGGCAACACG+AGG | 0.671023 | 3.3:-63016329 | None:intergenic |
| ACAACTTTGGTACATCATCA+GGG | 0.674313 | 3.3:+63013530 | MS.gene031871:CDS |
| AAACGAAATCAAAATGCCTG+AGG | 0.682481 | 3.3:+63011225 | None:intergenic |
| TGCCTTCTAATATTACTGTG+AGG | 0.698083 | 3.3:+63012913 | MS.gene031871:CDS |
| GACTGCGCCAGAGAATGGAA+TGG | 0.715004 | 3.3:+63016635 | MS.gene031871:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTAATAAATATAAATGTAG+CGG | + | chr3.3:63014682-63014701 | MS.gene031871:intron | 10.0% |
| !! | GAATAATATACATAATAAAA+AGG | - | chr3.3:63012346-63012365 | None:intergenic | 10.0% |
| !!! | TAATTTTACTTTTTAAATTG+TGG | + | chr3.3:63015919-63015938 | MS.gene031871:intron | 10.0% |
| !!! | TTTTTTTTTACAACTTTATA+GGG | + | chr3.3:63014065-63014084 | MS.gene031871:intron | 10.0% |
| !!! | TTTTTTTTTTACAACTTTAT+AGG | + | chr3.3:63014064-63014083 | MS.gene031871:intron | 10.0% |
| !! | AAATTTAATTAAAAGGAAAG+AGG | - | chr3.3:63014886-63014905 | None:intergenic | 15.0% |
| !! | ATGCTAATGTAAAAAAATAT+AGG | - | chr3.3:63014714-63014733 | None:intergenic | 15.0% |
| !! | ATTAAGACAAATTATTAAAG+TGG | - | chr3.3:63013071-63013090 | None:intergenic | 15.0% |
| !! | ATTTCTGATATTTAGTATTA+TGG | + | chr3.3:63016423-63016442 | MS.gene031871:intron | 15.0% |
| !! | CATATAAATCATAAAATGTT+AGG | + | chr3.3:63011733-63011752 | MS.gene031871:intron | 15.0% |
| !! | TAACTACTTATAAGTTATAA+AGG | - | chr3.3:63016031-63016050 | None:intergenic | 15.0% |
| !! | TTAAGTTAAAAACATCATTA+AGG | + | chr3.3:63016161-63016180 | MS.gene031871:intron | 15.0% |
| !!! | AATTTTGTTCATATGTATAT+AGG | + | chr3.3:63014961-63014980 | MS.gene031871:intron | 15.0% |
| !!! | ACATACAATAATATTTTTGA+GGG | - | chr3.3:63015778-63015797 | None:intergenic | 15.0% |
| !!! | CATTCTATTTAATTTTTTCA+GGG | + | chr3.3:63015401-63015420 | MS.gene031871:intron | 15.0% |
| !!! | TACATACAATAATATTTTTG+AGG | - | chr3.3:63015779-63015798 | None:intergenic | 15.0% |
| !!! | TCATTCTATTTAATTTTTTC+AGG | + | chr3.3:63015400-63015419 | MS.gene031871:intron | 15.0% |
| !! | AAAACAAATCAATTGTGAAA+CGG | - | chr3.3:63014182-63014201 | None:intergenic | 20.0% |
| !! | AAATATTATTGTATGTATGC+AGG | + | chr3.3:63015782-63015801 | MS.gene031871:intron | 20.0% |
| !! | AAGCAAAGAAAAAAAAGAAT+GGG | - | chr3.3:63014408-63014427 | None:intergenic | 20.0% |
| !! | AATATTATTGTATGTATGCA+GGG | + | chr3.3:63015783-63015802 | MS.gene031871:intron | 20.0% |
| !! | ATATTATATGCCTAATCATT+GGG | - | chr3.3:63013862-63013881 | None:intergenic | 20.0% |
| !! | ATTAAATTGCAGTTACAAAA+GGG | - | chr3.3:63013815-63013834 | None:intergenic | 20.0% |
| !! | ATTTATATGCATTAAAACCA+CGG | - | chr3.3:63011722-63011741 | None:intergenic | 20.0% |
| !! | ATTTCAAAGGAACATAATTA+AGG | + | chr3.3:63013897-63013916 | MS.gene031871:CDS | 20.0% |
| !! | CATAAAATTGTTAATATGAG+TGG | + | chr3.3:63012635-63012654 | MS.gene031871:intron | 20.0% |
| !! | GTGAAAAAAAATACTAAACT+GGG | - | chr3.3:63012455-63012474 | None:intergenic | 20.0% |
| !! | TATAAGTACAAGATAAATTG+AGG | - | chr3.3:63015665-63015684 | None:intergenic | 20.0% |
| !! | TATAATTTCTAATACTTACC+TGG | - | chr3.3:63015894-63015913 | None:intergenic | 20.0% |
| !! | TATATTATATGCCTAATCAT+TGG | - | chr3.3:63013863-63013882 | None:intergenic | 20.0% |
| !! | TTATAGCTGAATTAATAGTT+TGG | - | chr3.3:63015690-63015709 | None:intergenic | 20.0% |
| !! | TTCACCAAAATATTATTGTT+TGG | + | chr3.3:63015727-63015746 | MS.gene031871:intron | 20.0% |
| !! | TTTGAGAGAAATCATAAAAT+GGG | + | chr3.3:63011657-63011676 | MS.gene031871:intron | 20.0% |
| !!! | AACACCAAACAATAATATTT+TGG | - | chr3.3:63015734-63015753 | None:intergenic | 20.0% |
| !!! | AATCTTTTTTTGTTAGTAGA+TGG | + | chr3.3:63014517-63014536 | MS.gene031871:intron | 20.0% |
| !!! | AATTATGTTCCTTTGAAATT+CGG | - | chr3.3:63013896-63013915 | None:intergenic | 20.0% |
| !!! | ATGTATTCTAAAAGAAACAA+AGG | - | chr3.3:63012209-63012228 | None:intergenic | 20.0% |
| !!! | ATTTTGTTTCAAATGACAAT+TGG | + | chr3.3:63012022-63012041 | MS.gene031871:intron | 20.0% |
| !!! | TGTATTCTAAAAGAAACAAA+GGG | - | chr3.3:63012208-63012227 | None:intergenic | 20.0% |
| !!! | TTCATATGAATTTTGAATTC+AGG | - | chr3.3:63012768-63012787 | None:intergenic | 20.0% |
| ! | AAAAAGTTCCAAAACAAGAT+TGG | - | chr3.3:63014564-63014583 | None:intergenic | 25.0% |
| ! | AAAAGGAAAGAGGAAATATA+AGG | - | chr3.3:63014876-63014895 | None:intergenic | 25.0% |
| ! | AAAAGTGGAATCAAAAGAAA+AGG | - | chr3.3:63012995-63013014 | None:intergenic | 25.0% |
| ! | AAACTCAAATAAGTACTTGT+GGG | + | chr3.3:63011631-63011650 | MS.gene031871:intron | 25.0% |
| ! | AAAGAGATTTAGCAAAAATC+AGG | - | chr3.3:63012178-63012197 | None:intergenic | 25.0% |
| ! | ACTTAAAGCAAATTCAAGAA+CGG | - | chr3.3:63012280-63012299 | None:intergenic | 25.0% |
| ! | AGAATGGAATGGTTTATTAT+GGG | + | chr3.3:63016646-63016665 | MS.gene031871:CDS | 25.0% |
| ! | ATTATGTCTTCAAAACGAAA+AGG | + | chr3.3:63014906-63014925 | MS.gene031871:intron | 25.0% |
| ! | CATTAAATTGCAGTTACAAA+AGG | - | chr3.3:63013816-63013835 | None:intergenic | 25.0% |
| ! | GAAGCAAAGAAAAAAAAGAA+TGG | - | chr3.3:63014409-63014428 | None:intergenic | 25.0% |
| ! | GGTGAAAAAAAATACTAAAC+TGG | - | chr3.3:63012456-63012475 | None:intergenic | 25.0% |
| ! | GTTTGAGAGAAATCATAAAA+TGG | + | chr3.3:63011656-63011675 | MS.gene031871:intron | 25.0% |
| ! | TAAACTCAAATAAGTACTTG+TGG | + | chr3.3:63011630-63011649 | MS.gene031871:intron | 25.0% |
| ! | TACAGAAAACTAATGTTTGT+TGG | + | chr3.3:63015175-63015194 | MS.gene031871:intron | 25.0% |
| ! | TATTATATGCCTAATCATTG+GGG | - | chr3.3:63013861-63013880 | None:intergenic | 25.0% |
| ! | TCTGATATTTAGTATTATGG+TGG | + | chr3.3:63016426-63016445 | MS.gene031871:intron | 25.0% |
| ! | TGTACAGATTAAACAAAAAG+TGG | - | chr3.3:63013010-63013029 | None:intergenic | 25.0% |
| ! | TGTTAGTAGATGGATAAAAA+AGG | + | chr3.3:63014527-63014546 | MS.gene031871:intron | 25.0% |
| ! | TTAACTCATAATACGTGATA+TGG | - | chr3.3:63012676-63012695 | None:intergenic | 25.0% |
| ! | TTACAGTTATTGCATATTGA+TGG | + | chr3.3:63011786-63011805 | MS.gene031871:CDS | 25.0% |
| !! | ACAACTTGAATGTTTGATTT+AGG | + | chr3.3:63012835-63012854 | MS.gene031871:intron | 25.0% |
| !! | ATGACTATTATACAGCATTT+TGG | - | chr3.3:63012744-63012763 | None:intergenic | 25.0% |
| !! | GAATTTGCTTTAAGTTAATG+AGG | + | chr3.3:63012285-63012304 | MS.gene031871:intron | 25.0% |
| !! | GTATTCTAAAAGAAACAAAG+GGG | - | chr3.3:63012207-63012226 | None:intergenic | 25.0% |
| !! | TATTCTAAAAGAAACAAAGG+GGG | - | chr3.3:63012206-63012225 | None:intergenic | 25.0% |
| !! | TCAATTTGAGATTTGATATG+TGG | + | chr3.3:63016075-63016094 | MS.gene031871:intron | 25.0% |
| !! | TTCAAATTTGACTTCTGTAA+AGG | + | chr3.3:63016001-63016020 | MS.gene031871:intron | 25.0% |
| !! | TTGTATAATGCTTTTGACAA+TGG | + | chr3.3:63015856-63015875 | MS.gene031871:CDS | 25.0% |
| !! | TTGTCTTCTTTTTCTATTCA+TGG | + | chr3.3:63012571-63012590 | MS.gene031871:intron | 25.0% |
| !!! | AAAACAAATTTTTGAGACAC+CGG | - | chr3.3:63014296-63014315 | None:intergenic | 25.0% |
| !!! | AACAAGGTTTTATCACAAAA+AGG | - | chr3.3:63012112-63012131 | None:intergenic | 25.0% |
| !!! | AATACTATCCAATCTTGTTT+TGG | + | chr3.3:63014553-63014572 | MS.gene031871:intron | 25.0% |
| !!! | ATTTTGGTCCTATAATTTCA+AGG | - | chr3.3:63012728-63012747 | None:intergenic | 25.0% |
| AAACATGACAAAAGACTAGA+GGG | - | chr3.3:63015563-63015582 | None:intergenic | 30.0% | |
| AACAAAGTCATTGGAGATTT+AGG | - | chr3.3:63013133-63013152 | None:intergenic | 30.0% | |
| AATAGCTTACTATACTCCTT+CGG | - | chr3.3:63016056-63016075 | None:intergenic | 30.0% | |
| AATCAAAAAAGCCATAACAG+GGG | - | chr3.3:63016572-63016591 | None:intergenic | 30.0% | |
| AATTACACTGTGAGATATTG+CGG | + | chr3.3:63015474-63015493 | MS.gene031871:CDS | 30.0% | |
| ACATCATTAAAAATGTGTGG+AGG | + | chr3.3:63014442-63014461 | MS.gene031871:intron | 30.0% | |
| ACTAAACTGGGATAAAACAA+GGG | - | chr3.3:63012443-63012462 | None:intergenic | 30.0% | |
| AGTGAAGGTTATTCAAATGA+AGG | - | chr3.3:63016115-63016134 | None:intergenic | 30.0% | |
| ATAACATGTCAATCGTTCAT+TGG | + | chr3.3:63015272-63015291 | MS.gene031871:intron | 30.0% | |
| ATAGCAGAAACATATAGAGA+AGG | - | chr3.3:63013593-63013612 | None:intergenic | 30.0% | |
| ATAGCTCCAACAATAAGATT+TGG | - | chr3.3:63015823-63015842 | None:intergenic | 30.0% | |
| ATATGTATGGAAGTTTCTGT+TGG | + | chr3.3:63015110-63015129 | MS.gene031871:intron | 30.0% | |
| ATGTACCTTAATAGCAACAA+GGG | - | chr3.3:63012618-63012637 | None:intergenic | 30.0% | |
| CAAAGAAGAGCTTATGTTTA+AGG | - | chr3.3:63013213-63013232 | None:intergenic | 30.0% | |
| CAACTTCCAAATCTTATTGT+TGG | + | chr3.3:63015814-63015833 | MS.gene031871:CDS | 30.0% | |
| CAATTGAACCAATCTATCAA+TGG | - | chr3.3:63011877-63011896 | None:intergenic | 30.0% | |
| CAGTATTTGATGTCACAATT+TGG | + | chr3.3:63012310-63012329 | MS.gene031871:intron | 30.0% | |
| CTACTTAAACAAGTACTTGT+GGG | - | chr3.3:63011609-63011628 | None:intergenic | 30.0% | |
| GAATCAAAAAAGCCATAACA+GGG | - | chr3.3:63016573-63016592 | None:intergenic | 30.0% | |
| GAGAATGGAATGGTTTATTA+TGG | + | chr3.3:63016645-63016664 | MS.gene031871:CDS | 30.0% | |
| GGAATATATCACTAATTCTG+AGG | + | chr3.3:63013551-63013570 | MS.gene031871:CDS | 30.0% | |
| GTAGAGTTTATCAAGTTTGA+TGG | - | chr3.3:63011299-63011318 | None:intergenic | 30.0% | |
| TAACAAACCTATATAGACGA+TGG | + | chr3.3:63012693-63012712 | MS.gene031871:intron | 30.0% | |
| TAATAAACCATTCCATTCTC+TGG | - | chr3.3:63016645-63016664 | None:intergenic | 30.0% | |
| TACTAAACTGGGATAAAACA+AGG | - | chr3.3:63012444-63012463 | None:intergenic | 30.0% | |
| TATGTACCTTAATAGCAACA+AGG | - | chr3.3:63012619-63012638 | None:intergenic | 30.0% | |
| TCATAATACGTGATATGGAA+GGG | - | chr3.3:63012671-63012690 | None:intergenic | 30.0% | |
| TCTACTTAAACAAGTACTTG+TGG | - | chr3.3:63011610-63011629 | None:intergenic | 30.0% | |
| TGAATCATCATCAAGAAAAG+AGG | + | chr3.3:63014148-63014167 | MS.gene031871:CDS | 30.0% | |
| TGCATTACATTAAGTTCAAG+TGG | - | chr3.3:63013456-63013475 | None:intergenic | 30.0% | |
| TGGTTACTCCTTGAAATTAT+AGG | + | chr3.3:63012717-63012736 | MS.gene031871:intron | 30.0% | |
| TTATCGAAACATGACCTTAA+TGG | - | chr3.3:63011390-63011409 | None:intergenic | 30.0% | |
| TTCAAATGAAGGATTGAAGT+CGG | - | chr3.3:63016104-63016123 | None:intergenic | 30.0% | |
| TTTATCGTTGCAATGTGTAA+TGG | - | chr3.3:63015323-63015342 | None:intergenic | 30.0% | |
| ! | ACATTTTTAATGATGTGCCA+AGG | - | chr3.3:63014438-63014457 | None:intergenic | 30.0% |
| ! | ACTTGAATGTTTGATTTAGG+TGG | + | chr3.3:63012838-63012857 | MS.gene031871:intron | 30.0% |
| ! | AGATTCAAAGAAGATGCTTT+TGG | + | chr3.3:63016670-63016689 | MS.gene031871:CDS | 30.0% |
| ! | ATACGGTTTAGATGATCTTT+TGG | + | chr3.3:63015001-63015020 | MS.gene031871:intron | 30.0% |
| ! | CTTTGATGAAAATTTTCCAG+CGG | + | chr3.3:63013228-63013247 | MS.gene031871:CDS | 30.0% |
| ! | GTTTTCTGTAAGTTGTAGTA+TGG | - | chr3.3:63015165-63015184 | None:intergenic | 30.0% |
| ! | TACGGTTTAGATGATCTTTT+GGG | + | chr3.3:63015002-63015021 | MS.gene031871:intron | 30.0% |
| ! | TCCAGAATCTTTTAGTACAT+GGG | + | chr3.3:63012532-63012551 | MS.gene031871:CDS | 30.0% |
| ! | TTTTTACAACTTTATAGGGC+AGG | + | chr3.3:63014069-63014088 | MS.gene031871:intron | 30.0% |
| !! | AGATATTGCGGTTATTTTCA+AGG | + | chr3.3:63015486-63015505 | MS.gene031871:CDS | 30.0% |
| !! | AGCTTAGTTTTCATGTCATT+GGG | + | chr3.3:63013696-63013715 | MS.gene031871:CDS | 30.0% |
| !!! | AAACTGGAAGTTGTTTTTCA+TGG | + | chr3.3:63015621-63015640 | MS.gene031871:intron | 30.0% |
| !!! | AGGTTTGTTGCTAATTTTGT+TGG | - | chr3.3:63014113-63014132 | None:intergenic | 30.0% |
| !!! | ATTTTTTTTCACCTTCTTGC+AGG | + | chr3.3:63012463-63012482 | MS.gene031871:intron | 30.0% |
| !!! | GAAGTTGTTTTTCATGGAAT+AGG | + | chr3.3:63015627-63015646 | MS.gene031871:intron | 30.0% |
| !!! | TGATTTTTTCCCCAATGATT+AGG | + | chr3.3:63013849-63013868 | MS.gene031871:intron | 30.0% |
| AAAAAGAATGGGACACTTGT+CGG | - | chr3.3:63014397-63014416 | None:intergenic | 35.0% | |
| AAACCTATATAGACGATGGT+TGG | + | chr3.3:63012697-63012716 | MS.gene031871:intron | 35.0% | |
| AACAAAGACACACAAAGATG+TGG | - | chr3.3:63012370-63012389 | None:intergenic | 35.0% | |
| AACACATACTTCTTTGCAAG+AGG | - | chr3.3:63011768-63011787 | None:intergenic | 35.0% | |
| ACAACTTTGGTACATCATCA+GGG | + | chr3.3:63013530-63013549 | MS.gene031871:CDS | 35.0% | |
| ACACATTGACCGAATTTCAA+AGG | + | chr3.3:63013884-63013903 | MS.gene031871:CDS | 35.0% | |
| ACCCATGTACTAAAAGATTC+TGG | - | chr3.3:63012536-63012555 | None:intergenic | 35.0% | |
| AGATGCAGAATGATCTAACT+TGG | + | chr3.3:63014001-63014020 | MS.gene031871:intron | 35.0% | |
| AGCCTCACAGTAATATTAGA+AGG | - | chr3.3:63012918-63012937 | None:intergenic | 35.0% | |
| AGGTCTTTCAACACATTACA+AGG | - | chr3.3:63012092-63012111 | None:intergenic | 35.0% | |
| AGTTTCTGTTGGACATTATC+AGG | + | chr3.3:63015121-63015140 | MS.gene031871:intron | 35.0% | |
| ATAAGTCTCAAGATCCTCTA+AGG | - | chr3.3:63012946-63012965 | None:intergenic | 35.0% | |
| ATAGCTTACTATACTCCTTC+GGG | - | chr3.3:63016055-63016074 | None:intergenic | 35.0% | |
| ATCAGTTTGAACCATTTCAG+AGG | - | chr3.3:63012000-63012019 | None:intergenic | 35.0% | |
| ATTTGATGCGTACCAAAAAC+TGG | - | chr3.3:63013423-63013442 | None:intergenic | 35.0% | |
| CAAAGTTGCCATTGATAGAT+TGG | + | chr3.3:63011866-63011885 | MS.gene031871:CDS | 35.0% | |
| CAACTTATGGGCATATCATA+AGG | + | chr3.3:63011558-63011577 | MS.gene031871:intron | 35.0% | |
| CACATGCAACAGATAAAACA+AGG | - | chr3.3:63012128-63012147 | None:intergenic | 35.0% | |
| CCTTAGTTTAGGCTAACATT+TGG | - | chr3.3:63012048-63012067 | None:intergenic | 35.0% | |
| CTCATAATACGTGATATGGA+AGG | - | chr3.3:63012672-63012691 | None:intergenic | 35.0% | |
| CTTATAAGTAGTTATCCCGA+AGG | + | chr3.3:63016037-63016056 | MS.gene031871:intron | 35.0% | |
| CTTCCAGTTTCAATTTCCAT+AGG | - | chr3.3:63015611-63015630 | None:intergenic | 35.0% | |
| CTTCCTATGGAAATTGAAAC+TGG | + | chr3.3:63015605-63015624 | MS.gene031871:intron | 35.0% | |
| CTTGATAAACTCTACGAGAA+TGG | + | chr3.3:63011304-63011323 | MS.gene031871:CDS | 35.0% | |
| GAAACATGACAAAAGACTAG+AGG | - | chr3.3:63015564-63015583 | None:intergenic | 35.0% | |
| GATACTCATACAACACTTGT+TGG | + | chr3.3:63014365-63014384 | MS.gene031871:intron | 35.0% | |
| GATCATTGCCAAGAATTTCA+TGG | + | chr3.3:63011252-63011271 | MS.gene031871:CDS | 35.0% | |
| GATGTATAAGACAGTGAACA+GGG | - | chr3.3:63014854-63014873 | None:intergenic | 35.0% | |
| GCATTGCAGAAAATATTTGG+TGG | - | chr3.3:63015516-63015535 | None:intergenic | 35.0% | |
| GGAATCAAAAAAGCCATAAC+AGG | - | chr3.3:63016574-63016593 | None:intergenic | 35.0% | |
| GGCACATCATTAAAAATGTG+TGG | + | chr3.3:63014439-63014458 | MS.gene031871:intron | 35.0% | |
| GTGTTGTATGAGTATCATAC+AGG | - | chr3.3:63014361-63014380 | None:intergenic | 35.0% | |
| TAACCAACCATCGTCTATAT+AGG | - | chr3.3:63012703-63012722 | None:intergenic | 35.0% | |
| TAAGTTGCAACAAGAAACAC+TGG | - | chr3.3:63013166-63013185 | None:intergenic | 35.0% | |
| TATGAGTATCATACAGGTGT+CGG | - | chr3.3:63014355-63014374 | None:intergenic | 35.0% | |
| TCTGTAAGTTGTAGTATGGA+CGG | - | chr3.3:63015161-63015180 | None:intergenic | 35.0% | |
| TGAACGATTGACATGTTATG+AGG | - | chr3.3:63015271-63015290 | None:intergenic | 35.0% | |
| TGACTTGATATCATTCATGC+TGG | + | chr3.3:63013673-63013692 | MS.gene031871:CDS | 35.0% | |
| TGCCTTCTAATATTACTGTG+AGG | + | chr3.3:63012913-63012932 | MS.gene031871:CDS | 35.0% | |
| TGGATACAAATGCACAACTT+TGG | + | chr3.3:63013517-63013536 | MS.gene031871:CDS | 35.0% | |
| TTACCGCAAAACAAAGTCAT+TGG | - | chr3.3:63013142-63013161 | None:intergenic | 35.0% | |
| TTAGCCTAAACTAAGGAGTT+TGG | + | chr3.3:63012052-63012071 | MS.gene031871:intron | 35.0% | |
| TTCACGTAGAATTTCAGTGA+AGG | - | chr3.3:63016130-63016149 | None:intergenic | 35.0% | |
| TTGCTATGAATTACAGCTGA+TGG | + | chr3.3:63013497-63013516 | MS.gene031871:intron | 35.0% | |
| TTTCTCAATGCCTACCATTA+AGG | + | chr3.3:63011373-63011392 | MS.gene031871:intron | 35.0% | |
| TTTGCACTCTGTCATATATG+TGG | + | chr3.3:63013311-63013330 | MS.gene031871:intron | 35.0% | |
| ! | ACGGTTTAGATGATCTTTTG+GGG | + | chr3.3:63015003-63015022 | MS.gene031871:intron | 35.0% |
| ! | AGTTTATCAAGTTTGATGGC+AGG | - | chr3.3:63011295-63011314 | None:intergenic | 35.0% |
| ! | CCAAATGTTAGCCTAAACTA+AGG | + | chr3.3:63012045-63012064 | MS.gene031871:intron | 35.0% |
| ! | CTCCAGAATCTTTTAGTACA+TGG | + | chr3.3:63012531-63012550 | MS.gene031871:CDS | 35.0% |
| ! | CTGTTTTGCTTGCATATGTA+TGG | + | chr3.3:63015097-63015116 | MS.gene031871:intron | 35.0% |
| ! | GACAATTTATGCCTCTGAAA+TGG | + | chr3.3:63011986-63012005 | MS.gene031871:intron | 35.0% |
| ! | GATTCCTTATGTCATTTGTG+TGG | + | chr3.3:63016588-63016607 | MS.gene031871:intron | 35.0% |
| ! | TATTATGGTGGTGACAGATT+AGG | + | chr3.3:63016438-63016457 | MS.gene031871:intron | 35.0% |
| ! | TTCAAAGAAGATGCTTTTGG+TGG | + | chr3.3:63016673-63016692 | MS.gene031871:CDS | 35.0% |
| ! | TTGTTCCCTTGTTGCTATTA+AGG | + | chr3.3:63012610-63012629 | MS.gene031871:intron | 35.0% |
| ! | TTTTTGTTGAAGCTCTTGAC+AGG | + | chr3.3:63011901-63011920 | MS.gene031871:CDS | 35.0% |
| !! | AATGGTAGGCATTGAGAAAT+AGG | - | chr3.3:63011372-63011391 | None:intergenic | 35.0% |
| !! | GAGCTTAGTTTTCATGTCAT+TGG | + | chr3.3:63013695-63013714 | MS.gene031871:CDS | 35.0% |
| !! | GCTTAGTTTTCATGTCATTG+GGG | + | chr3.3:63013697-63013716 | MS.gene031871:CDS | 35.0% |
| !!! | TCTCCAATGACTTTGTTTTG+CGG | + | chr3.3:63013136-63013155 | MS.gene031871:intron | 35.0% |
| !!! | TTTTCAGGGATTTGTTGTTG+TGG | + | chr3.3:63015415-63015434 | MS.gene031871:intron | 35.0% |
| AACTCCTTAGCTATGAAGCA+TGG | + | chr3.3:63014225-63014244 | MS.gene031871:intron | 40.0% | |
| AATAAGCTGCGAGCAACTTA+TGG | + | chr3.3:63011545-63011564 | MS.gene031871:intron | 40.0% | |
| ACAAGGGTCGAAAGTGAAAA+TGG | - | chr3.3:63012427-63012446 | None:intergenic | 40.0% | |
| ACATACTTCTTTGCAAGAGG+CGG | - | chr3.3:63011765-63011784 | None:intergenic | 40.0% | |
| AGAATCAAAGTTGCTTACCC+TGG | - | chr3.3:63016528-63016547 | None:intergenic | 40.0% | |
| AGGAAGTTCCAAAACCCAAA+GGG | - | chr3.3:63015591-63015610 | None:intergenic | 40.0% | |
| ATAAGCTGCGAGCAACTTAT+GGG | + | chr3.3:63011546-63011565 | MS.gene031871:intron | 40.0% | |
| ATAGCTCCTTAGACATGCTA+AGG | + | chr3.3:63014772-63014791 | MS.gene031871:intron | 40.0% | |
| ATTCAGTCATGCTCACTGAA+AGG | - | chr3.3:63014133-63014152 | None:intergenic | 40.0% | |
| ATTGTGGTACTCACTCTAGA+TGG | + | chr3.3:63015935-63015954 | MS.gene031871:intron | 40.0% | |
| CAAGAATTTCATGGACATGG+TGG | + | chr3.3:63011261-63011280 | MS.gene031871:CDS | 40.0% | |
| CACAACTTTGGTACATCATC+AGG | + | chr3.3:63013529-63013548 | MS.gene031871:CDS | 40.0% | |
| CACCATGTCCATGAAATTCT+TGG | - | chr3.3:63011263-63011282 | None:intergenic | 40.0% | |
| CACGTTCTTGTGGTTGAATA+TGG | + | chr3.3:63012864-63012883 | MS.gene031871:intron | 40.0% | |
| CATGTCAATCGTTCATTGGT+TGG | + | chr3.3:63015276-63015295 | MS.gene031871:intron | 40.0% | |
| CATTCCTCCAATAACTTAGC+CGG | - | chr3.3:63011819-63011838 | None:intergenic | 40.0% | |
| CGAAACATGACCTTAATGGT+AGG | - | chr3.3:63011386-63011405 | None:intergenic | 40.0% | |
| GGATGTATAAGACAGTGAAC+AGG | - | chr3.3:63014855-63014874 | None:intergenic | 40.0% | |
| GGCTAAGTTATTGGAGGAAT+GGG | + | chr3.3:63011818-63011837 | MS.gene031871:CDS | 40.0% | |
| GTGTCCAAACTCCTTAGTTT+AGG | - | chr3.3:63012059-63012078 | None:intergenic | 40.0% | |
| TAGCTCCTTAGACATGCTAA+GGG | + | chr3.3:63014773-63014792 | MS.gene031871:intron | 40.0% | |
| TAGGAAGTTCCAAAACCCAA+AGG | - | chr3.3:63015592-63015611 | None:intergenic | 40.0% | |
| TATAGGGCAGGAAAGAAAGT+TGG | + | chr3.3:63014081-63014100 | MS.gene031871:intron | 40.0% | |
| TATGAAGCATGGACACCTAA+AGG | + | chr3.3:63014236-63014255 | MS.gene031871:intron | 40.0% | |
| TGCAGATAGTCAGTTTCCTT+CGG | + | chr3.3:63016294-63016313 | MS.gene031871:intron | 40.0% | |
| TGCCAAGAATTTCATGGACA+TGG | + | chr3.3:63011258-63011277 | MS.gene031871:CDS | 40.0% | |
| TTAGCATGTCTAAGGAGCTA+TGG | - | chr3.3:63014773-63014792 | None:intergenic | 40.0% | |
| ! | AAGCCACTCTCGGTTAATTT+TGG | - | chr3.3:63013400-63013419 | None:intergenic | 40.0% |
| ! | AAGGTCTTGTCAACATGACT+TGG | - | chr3.3:63013194-63013213 | None:intergenic | 40.0% |
| ! | ACAAGTACTTGTGGGCTATT+TGG | - | chr3.3:63011601-63011620 | None:intergenic | 40.0% |
| ! | ACCTGATCTGTGACATTTTC+AGG | - | chr3.3:63016362-63016381 | None:intergenic | 40.0% |
| ! | AGGTCTTGTCAACATGACTT+GGG | - | chr3.3:63013193-63013212 | None:intergenic | 40.0% |
| ! | CATCAGTCTGAAGTAGTAAC+AGG | - | chr3.3:63015247-63015266 | None:intergenic | 40.0% |
| ! | CGGTTTAGATGATCTTTTGG+GGG | + | chr3.3:63015004-63015023 | MS.gene031871:intron | 40.0% |
| ! | TAGTTTTCATGTCATTGGGG+AGG | + | chr3.3:63013700-63013719 | MS.gene031871:CDS | 40.0% |
| ! | TGCTCTTCATCGTCTACTTT+TGG | + | chr3.3:63013625-63013644 | MS.gene031871:intron | 40.0% |
| ! | TTTTCGTTCTTCCTGCAAGA+AGG | - | chr3.3:63012477-63012496 | None:intergenic | 40.0% |
| !! | AGACTTATGCTCTGGAACAA+TGG | + | chr3.3:63012958-63012977 | MS.gene031871:CDS | 40.0% |
| !! | GACTTATGCTCTGGAACAAT+GGG | + | chr3.3:63012959-63012978 | MS.gene031871:CDS | 40.0% |
| !! | TAGATGATCTTTTGGGGGAA+GGG | + | chr3.3:63015009-63015028 | MS.gene031871:intron | 40.0% |
| !! | TCTCAAGATCCTCTAAGGTT+GGG | - | chr3.3:63012941-63012960 | None:intergenic | 40.0% |
| !! | TTAGAAGGCATTGATTCCCT+CGG | - | chr3.3:63012903-63012922 | None:intergenic | 40.0% |
| !! | TTAGATGATCTTTTGGGGGA+AGG | + | chr3.3:63015008-63015027 | MS.gene031871:intron | 40.0% |
| !! | TTGTGCTTTGAAAGACCATC+TGG | - | chr3.3:63011849-63011868 | None:intergenic | 40.0% |
| !!! | TTGGGTTTTGGAACTTCCTA+TGG | + | chr3.3:63015592-63015611 | MS.gene031871:intron | 40.0% |
| AGGCAATGTTGATCAACGAG+GGG | + | chr3.3:63014462-63014481 | MS.gene031871:intron | 45.0% | |
| AGTTCCAAAACCCAAAGGGA+AGG | - | chr3.3:63015587-63015606 | None:intergenic | 45.0% | |
| ATTAAGGACCTTGCAGACCT+TGG | + | chr3.3:63013913-63013932 | MS.gene031871:CDS | 45.0% | |
| ATTATGACGAGTTCCCATCC+AGG | + | chr3.3:63016507-63016526 | MS.gene031871:CDS | 45.0% | |
| CAAAAACTGGAAGCCACTCT+CGG | - | chr3.3:63013410-63013429 | None:intergenic | 45.0% | |
| CAAAGTTGCTTACCCTGGAT+GGG | - | chr3.3:63016523-63016542 | None:intergenic | 45.0% | |
| CCTGCCACACAAATGACATA+AGG | - | chr3.3:63016595-63016614 | None:intergenic | 45.0% | |
| CGGCTAAGTTATTGGAGGAA+TGG | + | chr3.3:63011817-63011836 | MS.gene031871:CDS | 45.0% | |
| CTAAAGGATTAGGCGTGTCA+CGG | + | chr3.3:63014252-63014271 | MS.gene031871:intron | 45.0% | |
| CTGGTCAAACTTCAACAGGT+TGG | + | chr3.3:63013937-63013956 | MS.gene031871:intron | 45.0% | |
| CTTGTGGTTGAATATGGCAG+TGG | + | chr3.3:63012870-63012889 | MS.gene031871:intron | 45.0% | |
| GAGGCAATGTTGATCAACGA+GGG | + | chr3.3:63014461-63014480 | MS.gene031871:intron | 45.0% | |
| GCATGGACACCTAAAGGATT+AGG | + | chr3.3:63014242-63014261 | MS.gene031871:intron | 45.0% | |
| GCCTGAAAATGTCACAGATC+AGG | + | chr3.3:63016358-63016377 | MS.gene031871:CDS | 45.0% | |
| GCTCCAAAATTAACCGAGAG+TGG | + | chr3.3:63013394-63013413 | MS.gene031871:CDS | 45.0% | |
| GGATCTTGAGACTTATGCTC+TGG | + | chr3.3:63012950-63012969 | MS.gene031871:CDS | 45.0% | |
| GGGCTATTTGGAAGAGCTTA+TGG | - | chr3.3:63011589-63011608 | None:intergenic | 45.0% | |
| GTAAACAGAACCTCTGACTC+AGG | - | chr3.3:63013259-63013278 | None:intergenic | 45.0% | |
| GTCATGTTTCCCTTCCCTTT+GGG | + | chr3.3:63015574-63015593 | MS.gene031871:intron | 45.0% | |
| GTCTTACGTATCCCCTGTTA+TGG | + | chr3.3:63016558-63016577 | MS.gene031871:intron | 45.0% | |
| GTGTCCATGCTTCATAGCTA+AGG | - | chr3.3:63014232-63014251 | None:intergenic | 45.0% | |
| GTGTGGCAGGATGTATTTGA+AGG | + | chr3.3:63016605-63016624 | MS.gene031871:intron | 45.0% | |
| GTTCCAAAACCCAAAGGGAA+GGG | - | chr3.3:63015586-63015605 | None:intergenic | 45.0% | |
| TAGGTGGTAACACGTTCTTG+TGG | + | chr3.3:63012854-63012873 | MS.gene031871:intron | 45.0% | |
| TCAAAGTTGCTTACCCTGGA+TGG | - | chr3.3:63016524-63016543 | None:intergenic | 45.0% | |
| TCATCTGCGAAGCTATTCTC+AGG | + | chr3.3:63011329-63011348 | MS.gene031871:CDS | 45.0% | |
| TGTCATGTTTCCCTTCCCTT+TGG | + | chr3.3:63015573-63015592 | MS.gene031871:intron | 45.0% | |
| TGTGCAACAGATTCTCAGCA+AGG | - | chr3.3:63013741-63013760 | None:intergenic | 45.0% | |
| TTAAGGACCTTGCAGACCTT+GGG | + | chr3.3:63013914-63013933 | MS.gene031871:CDS | 45.0% | |
| TTATGACGAGTTCCCATCCA+GGG | + | chr3.3:63016508-63016527 | MS.gene031871:CDS | 45.0% | |
| TTCTTTGCTTCGACACACCT+TGG | + | chr3.3:63014418-63014437 | MS.gene031871:intron | 45.0% | |
| TTCTTTGCTTCGACACTCGT+TGG | + | chr3.3:63014321-63014340 | MS.gene031871:intron | 45.0% | |
| TTGGCAATGATCCTAACCTC+AGG | - | chr3.3:63011244-63011263 | None:intergenic | 45.0% | |
| ! | CCTTATGTCATTTGTGTGGC+AGG | + | chr3.3:63016592-63016611 | MS.gene031871:intron | 45.0% |
| ! | GTGGTGACAGATTAGGTTGT+GGG | + | chr3.3:63016445-63016464 | MS.gene031871:intron | 45.0% |
| !! | AGATGATCTTTTGGGGGAAG+GGG | + | chr3.3:63015010-63015029 | MS.gene031871:intron | 45.0% |
| !! | CGTTCATTGGTTGGCTTTAG+TGG | + | chr3.3:63015285-63015304 | MS.gene031871:intron | 45.0% |
| !! | GTCTCAAGATCCTCTAAGGT+TGG | - | chr3.3:63012942-63012961 | None:intergenic | 45.0% |
| !! | TCATCGTCTACTTTTGGTGC+AGG | + | chr3.3:63013631-63013650 | MS.gene031871:intron | 45.0% |
| !! | TTATGCTCTGGAACAATGGG+AGG | + | chr3.3:63012962-63012981 | MS.gene031871:CDS | 45.0% |
| !! | TTTCCCTTCCCTTTGGGTTT+TGG | + | chr3.3:63015580-63015599 | MS.gene031871:intron | 45.0% |
| !!! | TGAGTTTTGAATGTGCTCCG+TGG | + | chr3.3:63011702-63011721 | MS.gene031871:intron | 45.0% |
| !! | ACATAATAAATTTAATTAAA+AGG | - | chr3.3:63014893-63014912 | None:intergenic | 5.0% |
| !! | AGTATATATTTAATTATATA+CGG | + | chr3.3:63014984-63015003 | MS.gene031871:intron | 5.0% |
| CAATGGCATTACAGCAGACC+AGG | + | chr3.3:63015873-63015892 | MS.gene031871:CDS | 50.0% | |
| CGTGACACGCCTAATCCTTT+AGG | - | chr3.3:63014254-63014273 | None:intergenic | 50.0% | |
| CTCCACCCTTAGCATGTCTA+AGG | - | chr3.3:63014781-63014800 | None:intergenic | 50.0% | |
| CTCCTTAGACATGCTAAGGG+TGG | + | chr3.3:63014776-63014795 | MS.gene031871:intron | 50.0% | |
| CTTAGACATGCTAAGGGTGG+AGG | + | chr3.3:63014779-63014798 | MS.gene031871:intron | 50.0% | |
| GGAGGCAATGTTGATCAACG+AGG | + | chr3.3:63014460-63014479 | MS.gene031871:intron | 50.0% | |
| GGCAATGTTGATCAACGAGG+GGG | + | chr3.3:63014463-63014482 | MS.gene031871:intron | 50.0% | |
| GTTGAAGTTTGACCAGCCCA+AGG | - | chr3.3:63013933-63013952 | None:intergenic | 50.0% | |
| TCCAATAACTTAGCCGGCAC+AGG | - | chr3.3:63011813-63011832 | None:intergenic | 50.0% | |
| TGCTTCGACACTCGTTGGAT+CGG | + | chr3.3:63014326-63014345 | MS.gene031871:intron | 50.0% | |
| ! | CGAGAGTGGCTTCCAGTTTT+TGG | + | chr3.3:63013408-63013427 | MS.gene031871:CDS | 50.0% |
| ! | GCATATTGATGGACCTGTGC+CGG | + | chr3.3:63011797-63011816 | MS.gene031871:CDS | 50.0% |
| ! | GGTGGTGACAGATTAGGTTG+TGG | + | chr3.3:63016444-63016463 | MS.gene031871:intron | 50.0% |
| !! | ACCTGTGCCGGCTAAGTTAT+TGG | + | chr3.3:63011809-63011828 | MS.gene031871:CDS | 50.0% |
| !! | CTACTTTTGGTGCAGGAGAG+AGG | + | chr3.3:63013638-63013657 | MS.gene031871:intron | 50.0% |
| !! | GCTTTTGGTGGTCAAGTCTG+AGG | + | chr3.3:63016685-63016704 | MS.gene031871:CDS | 50.0% |
| !! | GTGACATTTTCAGGCACTGC+TGG | - | chr3.3:63016353-63016372 | None:intergenic | 50.0% |
| !! | TGGGCTGGTCAAACTTCAAC+AGG | + | chr3.3:63013933-63013952 | MS.gene031871:CDS | 50.0% |
| !! | TGTGCCGGCTAAGTTATTGG+AGG | + | chr3.3:63011812-63011831 | MS.gene031871:CDS | 50.0% |
| ATGGCAGTGGAACTTTGCCG+AGG | + | chr3.3:63012883-63012902 | MS.gene031871:intron | 55.0% | |
| CGACGTGTCAATGTCGTGTC+AGG | + | chr3.3:63014737-63014756 | MS.gene031871:intron | 55.0% | |
| GACTGCGCCAGAGAATGGAA+TGG | + | chr3.3:63016635-63016654 | MS.gene031871:CDS | 55.0% | |
| GAGGAATGGGTGCTTCCAGA+TGG | + | chr3.3:63011831-63011850 | MS.gene031871:CDS | 55.0% | |
| GAGGATGAGCATTCTGCCGA+AGG | - | chr3.3:63016313-63016332 | None:intergenic | 55.0% | |
| TCATCCTCGTGTTGCCCAGA+GGG | + | chr3.3:63016325-63016344 | MS.gene031871:CDS | 55.0% | |
| TGAACAGGGCACAGAGAGAG+AGG | - | chr3.3:63014840-63014859 | None:intergenic | 55.0% | |
| TGGCAGTGGAACTTTGCCGA+GGG | + | chr3.3:63012884-63012903 | MS.gene031871:intron | 55.0% | |
| TGTGAGGCTCCCAACCTTAG+AGG | + | chr3.3:63012929-63012948 | MS.gene031871:CDS | 55.0% | |
| !! | CAGGAGAGAGGTGTTGATGC+TGG | + | chr3.3:63013650-63013669 | MS.gene031871:intron | 55.0% |
| CCATTCTCTGGCGCAGTCAC+AGG | - | chr3.3:63016633-63016652 | None:intergenic | 60.0% | |
| CCTGTGACTGCGCCAGAGAA+TGG | + | chr3.3:63016630-63016649 | MS.gene031871:CDS | 60.0% | |
| CTCATCCTCGTGTTGCCCAG+AGG | + | chr3.3:63016324-63016343 | MS.gene031871:CDS | 60.0% | |
| GACACCGGTCAGACGAGTGT+CGG | - | chr3.3:63014281-63014300 | None:intergenic | 60.0% | |
| GTGTCCGACACTCGTCTGAC+CGG | + | chr3.3:63014274-63014293 | MS.gene031871:intron | 60.0% | |
| TGACCAGCCCAAGGTCTGCA+AGG | - | chr3.3:63013924-63013943 | None:intergenic | 60.0% | |
| ! | AGGCACTGCTGGTACCCTCT+GGG | - | chr3.3:63016342-63016361 | None:intergenic | 60.0% |
| AGCGGCGTCTCCTGAGTCAG+AGG | + | chr3.3:63013246-63013265 | MS.gene031871:CDS | 65.0% | |
| GGACCTTGCAGACCTTGGGC+TGG | + | chr3.3:63013918-63013937 | MS.gene031871:CDS | 65.0% | |
| GGTACCCTCTGGGCAACACG+AGG | - | chr3.3:63016332-63016351 | None:intergenic | 65.0% | |
| TCTGACTCAGGAGACGCCGC+TGG | - | chr3.3:63013247-63013266 | None:intergenic | 65.0% | |
| ! | CAGGCACTGCTGGTACCCTC+TGG | - | chr3.3:63016343-63016362 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 63011238 | 63016748 | 63011238 | ID=MS.gene031871 |
| chr3.3 | mRNA | 63011238 | 63016748 | 63011238 | ID=MS.gene031871.t1;Parent=MS.gene031871 |
| chr3.3 | exon | 63011238 | 63011350 | 63011238 | ID=MS.gene031871.t1.exon1;Parent=MS.gene031871.t1 |
| chr3.3 | CDS | 63011238 | 63011350 | 63011238 | ID=cds.MS.gene031871.t1;Parent=MS.gene031871.t1 |
| chr3.3 | exon | 63011755 | 63011922 | 63011755 | ID=MS.gene031871.t1.exon2;Parent=MS.gene031871.t1 |
| chr3.3 | CDS | 63011755 | 63011922 | 63011755 | ID=cds.MS.gene031871.t1;Parent=MS.gene031871.t1 |
| chr3.3 | exon | 63012485 | 63012553 | 63012485 | ID=MS.gene031871.t1.exon3;Parent=MS.gene031871.t1 |
| chr3.3 | CDS | 63012485 | 63012553 | 63012485 | ID=cds.MS.gene031871.t1;Parent=MS.gene031871.t1 |
| chr3.3 | exon | 63012890 | 63012983 | 63012890 | ID=MS.gene031871.t1.exon4;Parent=MS.gene031871.t1 |
| chr3.3 | CDS | 63012890 | 63012983 | 63012890 | ID=cds.MS.gene031871.t1;Parent=MS.gene031871.t1 |
| chr3.3 | exon | 63013167 | 63013267 | 63013167 | ID=MS.gene031871.t1.exon5;Parent=MS.gene031871.t1 |
| chr3.3 | CDS | 63013167 | 63013267 | 63013167 | ID=cds.MS.gene031871.t1;Parent=MS.gene031871.t1 |
| chr3.3 | exon | 63013384 | 63013429 | 63013384 | ID=MS.gene031871.t1.exon6;Parent=MS.gene031871.t1 |
| chr3.3 | CDS | 63013384 | 63013429 | 63013384 | ID=cds.MS.gene031871.t1;Parent=MS.gene031871.t1 |
| chr3.3 | exon | 63013513 | 63013572 | 63013513 | ID=MS.gene031871.t1.exon7;Parent=MS.gene031871.t1 |
| chr3.3 | CDS | 63013513 | 63013572 | 63013513 | ID=cds.MS.gene031871.t1;Parent=MS.gene031871.t1 |
| chr3.3 | exon | 63013653 | 63013721 | 63013653 | ID=MS.gene031871.t1.exon8;Parent=MS.gene031871.t1 |
| chr3.3 | CDS | 63013653 | 63013721 | 63013653 | ID=cds.MS.gene031871.t1;Parent=MS.gene031871.t1 |
| chr3.3 | exon | 63013871 | 63013954 | 63013871 | ID=MS.gene031871.t1.exon9;Parent=MS.gene031871.t1 |
| chr3.3 | CDS | 63013871 | 63013954 | 63013871 | ID=cds.MS.gene031871.t1;Parent=MS.gene031871.t1 |
| chr3.3 | exon | 63014086 | 63014169 | 63014086 | ID=MS.gene031871.t1.exon10;Parent=MS.gene031871.t1 |
| chr3.3 | CDS | 63014086 | 63014169 | 63014086 | ID=cds.MS.gene031871.t1;Parent=MS.gene031871.t1 |
| chr3.3 | exon | 63015422 | 63015507 | 63015422 | ID=MS.gene031871.t1.exon11;Parent=MS.gene031871.t1 |
| chr3.3 | CDS | 63015422 | 63015507 | 63015422 | ID=cds.MS.gene031871.t1;Parent=MS.gene031871.t1 |
| chr3.3 | exon | 63015804 | 63015894 | 63015804 | ID=MS.gene031871.t1.exon12;Parent=MS.gene031871.t1 |
| chr3.3 | CDS | 63015804 | 63015894 | 63015804 | ID=cds.MS.gene031871.t1;Parent=MS.gene031871.t1 |
| chr3.3 | exon | 63016299 | 63016379 | 63016299 | ID=MS.gene031871.t1.exon13;Parent=MS.gene031871.t1 |
| chr3.3 | CDS | 63016299 | 63016379 | 63016299 | ID=cds.MS.gene031871.t1;Parent=MS.gene031871.t1 |
| chr3.3 | exon | 63016455 | 63016529 | 63016455 | ID=MS.gene031871.t1.exon14;Parent=MS.gene031871.t1 |
| chr3.3 | CDS | 63016455 | 63016529 | 63016455 | ID=cds.MS.gene031871.t1;Parent=MS.gene031871.t1 |
| chr3.3 | exon | 63016614 | 63016748 | 63016614 | ID=MS.gene031871.t1.exon15;Parent=MS.gene031871.t1 |
| chr3.3 | CDS | 63016614 | 63016748 | 63016614 | ID=cds.MS.gene031871.t1;Parent=MS.gene031871.t1 |
| Gene Sequence |
| Protein sequence |
