AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene032173

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene032173.t1 MTR_3g054090 98.339 301 5 0 1 301 1 301 0.0 603
MS.gene032173.t1 MTR_6g072020 26.433 314 194 9 20 301 18 326 1.43e-17 82.0
MS.gene032173.t1 MTR_7g104550 25.397 252 155 10 46 286 7 236 1.63e-12 67.4
MS.gene032173.t1 MTR_5g016370 24.590 305 155 13 23 284 318 590 2.87e-12 67.4
MS.gene032173.t1 MTR_4g095058 27.660 235 134 10 54 284 371 573 5.89e-12 66.2
MS.gene032173.t1 MTR_4g095058 27.660 235 134 10 54 284 369 571 6.21e-12 66.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene032173.t1 AT2G30050 84.768 302 45 1 1 301 1 302 0.0 531
MS.gene032173.t1 AT3G01340 82.119 302 53 1 1 301 1 302 0.0 521
MS.gene032173.t1 AT3G01340 82.119 302 53 1 1 301 1 302 0.0 521
MS.gene032173.t1 AT4G02730 27.165 254 149 11 46 298 34 252 1.03e-12 68.2
MS.gene032173.t1 AT1G64350 25.180 278 167 11 55 301 56 323 2.71e-12 66.6
MS.gene032173.t1 AT2G26060 27.490 251 148 12 47 285 12 240 2.58e-11 63.9
MS.gene032173.t1 AT2G26060 27.016 248 149 8 4 240 14 240 8.55e-11 62.4

Find 108 sgRNAs with CRISPR-Local

Find 107 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGTTGCTTGGGCACCGAATT+TGG 0.171644 2.3:+4560471 MS.gene032173:CDS
TTGGCGTGACTTCTGTTTCT+TGG 0.220789 2.3:+4560278 MS.gene032173:CDS
GAGCTTGGATCCATTCATTT+TGG 0.222798 2.3:-4560093 None:intergenic
CTGGTCACCAAGGGCCTGTT+TGG 0.241942 2.3:+4559984 MS.gene032173:CDS
ATGACGGACGCGTCATTCTT+TGG 0.264898 2.3:+4560059 MS.gene032173:CDS
CCGGGTGCTCTTGTTGGTTC+AGG 0.273284 2.3:+4560316 MS.gene032173:CDS
GAAACAACAATGTCACATTA+TGG 0.309368 2.3:+4560662 MS.gene032173:CDS
GATCACACAATTAAGATAAT+TGG 0.313304 2.3:+4559923 MS.gene032173:CDS
GCACTAGCAATAGTAGATTT+AGG 0.318347 2.3:-4560499 None:intergenic
GTCTTTGACAGGAAATATAT+TGG 0.319441 2.3:+4560627 MS.gene032173:CDS
CACTTCAGATGCATAATGAT+TGG 0.332563 2.3:+4560440 MS.gene032173:CDS
TGTTTCTTGGGCTCCTTCAA+TGG 0.345050 2.3:+4560291 MS.gene032173:CDS
GAAACAGAAGTCACGCCAAC+TGG 0.350631 2.3:-4560274 None:intergenic
GTCTGTGAATTCAGTTGCTT+GGG 0.353330 2.3:+4560138 MS.gene032173:CDS
GTTGCTTGGGCACCGAATTT+GGG 0.355435 2.3:+4560472 MS.gene032173:CDS
TGGCGTGACTTCTGTTTCTT+GGG 0.366728 2.3:+4560279 MS.gene032173:CDS
AAGAATGACGCGTCCGTCAT+AGG 0.368314 2.3:-4560056 None:intergenic
GACCATGATACCCTCCAAAC+AGG 0.377638 2.3:-4560607 None:intergenic
ATGGCGCCGGGTGCTCTTGT+TGG 0.389540 2.3:+4560310 MS.gene032173:CDS
TTGGCAAAGAAGGGGATCAT+TGG 0.390865 2.3:+4560554 MS.gene032173:CDS
TGCTTGGGCGCCTCATGAGT+TGG 0.404443 2.3:+4560153 MS.gene032173:CDS
TTGGGCTCCTTCAATGGCGC+CGG 0.406041 2.3:+4560297 MS.gene032173:CDS
TTGGCTTGTGCTTCGTCTGA+TGG 0.406467 2.3:+4560184 MS.gene032173:CDS
TGGTCACCAAGGGCCTGTTT+GGG 0.409839 2.3:+4559985 MS.gene032173:CDS
GCTTGGGCGCCTCATGAGTT+GGG 0.412397 2.3:+4560154 MS.gene032173:CDS
GCGTGGGCTCACCCTAAGTT+TGG 0.412765 2.3:+4560013 MS.gene032173:CDS
GCCTGTTTGGGAGGTTGCGT+GGG 0.414310 2.3:+4559997 MS.gene032173:CDS
CGTCTGTGAATTCAGTTGCT+TGG 0.416920 2.3:+4560137 MS.gene032173:CDS
ATGATTTCAAGACCCCTGTT+TGG 0.434543 2.3:+4560593 MS.gene032173:CDS
TGGGCTCCTTCAATGGCGCC+GGG 0.435343 2.3:+4560298 MS.gene032173:CDS
GGCCTGTTTGGGAGGTTGCG+TGG 0.439174 2.3:+4559996 MS.gene032173:CDS
TTATGGAAAGAAGCTGTAGA+TGG 0.441647 2.3:+4560679 MS.gene032173:CDS
TCATGAGTTGGGTCTCTGCT+TGG 0.444150 2.3:+4560165 MS.gene032173:CDS
ATATGGACTGTTGGCAAAGA+AGG 0.444237 2.3:+4560544 MS.gene032173:CDS
GATTTAGGAAGTCCCAAATT+CGG 0.447910 2.3:-4560484 None:intergenic
GCCCACGCAACCTCCCAAAC+AGG 0.450330 2.3:-4559998 None:intergenic
AGAGCACCCGGCGCCATTGA+AGG 0.456543 2.3:-4560304 None:intergenic
GTGCAGAAGCTTTGCTCTGG+TGG 0.463692 2.3:+4560352 MS.gene032173:CDS
TGTAGATGGGGAATGGCAAC+AGG 0.465699 2.3:+4560693 MS.gene032173:CDS
TTCGTCTGATGGGAATATTT+CGG 0.470361 2.3:+4560195 MS.gene032173:CDS
ATGGATTATGTCTTGATGAC+CGG 0.472610 2.3:-4559852 None:intergenic
TCATTATGCATCTGAAGTGC+AGG 0.475699 2.3:-4560436 None:intergenic
GCGAGAAGGGAACCAAACTT+AGG 0.477573 2.3:-4560025 None:intergenic
CCCCTGTTTGGAGGGTATCA+TGG 0.478267 2.3:+4560605 MS.gene032173:CDS
TGGCTTGTGCTTCGTCTGAT+GGG 0.479615 2.3:+4560185 MS.gene032173:CDS
GATGTTGCAATGGATTACTA+TGG 0.484612 2.3:+4559875 MS.gene032173:CDS
ACTTCAGATGCATAATGATT+GGG 0.487890 2.3:+4560441 MS.gene032173:CDS
TGGCAAAGAAGGGGATCATT+GGG 0.491121 2.3:+4560555 MS.gene032173:CDS
CTGCAAAGGCAGATGGTGGA+TGG 0.503412 2.3:+4560224 MS.gene032173:CDS
CCTGTGCAGAAGCTTTGCTC+TGG 0.505097 2.3:+4560349 MS.gene032173:CDS
CAGCATCTAGCAACTTTGAC+TGG 0.508215 2.3:+4559965 MS.gene032173:CDS
ATTGGGTTCGAGATGTTGCT+TGG 0.510278 2.3:+4560458 MS.gene032173:CDS
CGCGTCATTCTTTGGAAGGA+GGG 0.511398 2.3:+4560067 MS.gene032173:CDS
AATATATTGGCTGTGGCTGA+TGG 0.512420 2.3:+4560640 MS.gene032173:CDS
TTGGGTTCGAGATGTTGCTT+GGG 0.517736 2.3:+4560459 MS.gene032173:CDS
CCTTCTCAGAAGGTTGAAAC+CGG 0.519832 2.3:+4559833 MS.gene032173:CDS
TATGGAAAGAAGCTGTAGAT+GGG 0.520145 2.3:+4560680 MS.gene032173:CDS
CAACCTCCCAAACAGGCCCT+TGG 0.520290 2.3:-4559991 None:intergenic
AGTAATCCATTGCAACATCA+TGG 0.520730 2.3:-4559871 None:intergenic
TCACCAAGGGCCTGTTTGGG+AGG 0.524084 2.3:+4559988 MS.gene032173:CDS
AGGGTATCATGGTCTTTGAC+AGG 0.524931 2.3:+4560616 MS.gene032173:CDS
AAGACGGTAAAGTGATCATA+TGG 0.528476 2.3:+4560527 MS.gene032173:CDS
TATGGACTGTTGGCAAAGAA+GGG 0.531973 2.3:+4560545 MS.gene032173:CDS
AGGAGGGTAACCAAAATGAA+TGG 0.536407 2.3:+4560083 MS.gene032173:CDS
TAGCAATGGACAGTGGAAGA+TGG 0.537404 2.3:+4560405 MS.gene032173:CDS
ATTTCAAGACCCCTGTTTGG+AGG 0.539676 2.3:+4560596 MS.gene032173:CDS
TGGTTGCGATAATACTGTTA+AGG 0.541340 2.3:+4560372 MS.gene032173:CDS
CGAGAAGGGAACCAAACTTA+GGG 0.543581 2.3:-4560024 None:intergenic
GAGGCTAGCAACAGCATCAT+CGG 0.547815 2.3:+4559901 MS.gene032173:CDS
CAGAAACATGCCTTCTCAGA+AGG 0.548126 2.3:+4559823 None:intergenic
GTATTTACTGCAAAGGCAGA+TGG 0.549821 2.3:+4560217 MS.gene032173:CDS
GACAGGAAATATATTGGCTG+TGG 0.552846 2.3:+4560633 MS.gene032173:CDS
GCTCATCAAAGACATGAGCT+TGG 0.554760 2.3:-4560108 None:intergenic
CATAGGAACATGAAGCGAGA+AGG 0.556637 2.3:-4560039 None:intergenic
AGGGGATCATTGGGAAGGCA+AGG 0.557835 2.3:+4560564 MS.gene032173:CDS
CAATGGATTACTATGGAAAG+AGG 0.559724 2.3:+4559882 MS.gene032173:CDS
CATAATCCATGATGTTGCAA+TGG 0.560125 2.3:+4559865 MS.gene032173:CDS
CTCGCTTCATGTTCCTATGA+CGG 0.561648 2.3:+4560043 MS.gene032173:CDS
CCGGTTTCAACCTTCTGAGA+AGG 0.569075 2.3:-4559833 None:intergenic
TTTCAAGACCCCTGTTTGGA+GGG 0.570292 2.3:+4560597 MS.gene032173:CDS
AAAGTGATCATATGGACTGT+TGG 0.571303 2.3:+4560535 MS.gene032173:CDS
CGGACGCGTCATTCTTTGGA+AGG 0.574371 2.3:+4560063 MS.gene032173:CDS
TGCAAAGGCAGATGGTGGAT+GGG 0.576134 2.3:+4560225 MS.gene032173:CDS
TATTTCGGTATTTACTGCAA+AGG 0.580846 2.3:+4560210 MS.gene032173:CDS
ACGCGTCATTCTTTGGAAGG+AGG 0.581061 2.3:+4560066 MS.gene032173:CDS
CCAGAGCAAAGCTTCTGCAC+AGG 0.586753 2.3:-4560349 None:intergenic
ACCATGATACCCTCCAAACA+GGG 0.587238 2.3:-4560606 None:intergenic
ATGGTGGATGGGACACCTCA+AGG 0.588008 2.3:+4560236 MS.gene032173:CDS
ATTGCTAGTGCGTCGCAAGA+CGG 0.588884 2.3:+4560511 MS.gene032173:CDS
AAGAAGCTGTAGATGGGGAA+TGG 0.590067 2.3:+4560686 MS.gene032173:CDS
ATAGGAACATGAAGCGAGAA+GGG 0.592233 2.3:-4560038 None:intergenic
CCTGAACCAACAAGAGCACC+CGG 0.595135 2.3:-4560316 None:intergenic
AAGCAGAGACCCAACTCATG+AGG 0.602443 2.3:-4560163 None:intergenic
TTTACTGCAAAGGCAGATGG+TGG 0.615017 2.3:+4560220 MS.gene032173:CDS
ATTGATCAAGCTCACCCAGT+TGG 0.615288 2.3:+4560259 MS.gene032173:CDS
AAACAGAAGTCACGCCAACT+GGG 0.618747 2.3:-4560273 None:intergenic
CATTATGCATCTGAAGTGCA+GGG 0.623511 2.3:-4560435 None:intergenic
CAACTTTGACTGGTCACCAA+GGG 0.628577 2.3:+4559975 MS.gene032173:CDS
ATGGAAAGAAGCTGTAGATG+GGG 0.635633 2.3:+4560681 MS.gene032173:CDS
ATGGACTGTTGGCAAAGAAG+GGG 0.637383 2.3:+4560546 MS.gene032173:CDS
GCAACTTTGACTGGTCACCA+AGG 0.656777 2.3:+4559974 MS.gene032173:CDS
AAGGTGTGGAAGCTTAGCAA+TGG 0.658169 2.3:+4560391 MS.gene032173:CDS
GTGAGCTTGATCAATCCTTG+AGG 0.660407 2.3:-4560251 None:intergenic
GCGATAATACTGTTAAGGTG+TGG 0.664994 2.3:+4560377 MS.gene032173:CDS
AAAGAAGGGGATCATTGGGA+AGG 0.667803 2.3:+4560559 MS.gene032173:CDS
GGAAGCTTAGCAATGGACAG+TGG 0.684704 2.3:+4560398 MS.gene032173:CDS
ATGGCAACAGGTGACAACAG+TGG 0.686621 2.3:+4560705 MS.gene032173:CDS
CCATGATACCCTCCAAACAG+GGG 0.724647 2.3:-4560605 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
! GATCACACAATTAAGATAAT+TGG + chr2.3:4559923-4559942 MS.gene032173:CDS 25.0%
ACTTCAGATGCATAATGATT+GGG + chr2.3:4560441-4560460 MS.gene032173:CDS 30.0%
GAAACAACAATGTCACATTA+TGG + chr2.3:4560662-4560681 MS.gene032173:CDS 30.0%
GTCTTTGACAGGAAATATAT+TGG + chr2.3:4560627-4560646 MS.gene032173:CDS 30.0%
TATTTCGGTATTTACTGCAA+AGG + chr2.3:4560210-4560229 MS.gene032173:CDS 30.0%
AAGACGGTAAAGTGATCATA+TGG + chr2.3:4560527-4560546 MS.gene032173:CDS 35.0%
AGTAATCCATTGCAACATCA+TGG - chr2.3:4559874-4559893 None:intergenic 35.0%
CACTTCAGATGCATAATGAT+TGG + chr2.3:4560440-4560459 MS.gene032173:CDS 35.0%
CATAATCCATGATGTTGCAA+TGG + chr2.3:4559865-4559884 MS.gene032173:CDS 35.0%
GATTTAGGAAGTCCCAAATT+CGG - chr2.3:4560487-4560506 None:intergenic 35.0%
GCACTAGCAATAGTAGATTT+AGG - chr2.3:4560502-4560521 None:intergenic 35.0%
TATGGAAAGAAGCTGTAGAT+GGG + chr2.3:4560680-4560699 MS.gene032173:CDS 35.0%
TGGTTGCGATAATACTGTTA+AGG + chr2.3:4560372-4560391 MS.gene032173:CDS 35.0%
TTATGGAAAGAAGCTGTAGA+TGG + chr2.3:4560679-4560698 MS.gene032173:CDS 35.0%
TTCGTCTGATGGGAATATTT+CGG + chr2.3:4560195-4560214 MS.gene032173:CDS 35.0%
! AAAGTGATCATATGGACTGT+TGG + chr2.3:4560535-4560554 MS.gene032173:CDS 35.0%
! ATGGATTATGTCTTGATGAC+CGG - chr2.3:4559855-4559874 None:intergenic 35.0%
!! CAATGGATTACTATGGAAAG+AGG + chr2.3:4559882-4559901 MS.gene032173:CDS 35.0%
!! GATGTTGCAATGGATTACTA+TGG + chr2.3:4559875-4559894 MS.gene032173:CDS 35.0%
AGGAGGGTAACCAAAATGAA+TGG + chr2.3:4560083-4560102 MS.gene032173:CDS 40.0%
ATAGGAACATGAAGCGAGAA+GGG - chr2.3:4560041-4560060 None:intergenic 40.0%
ATGATTTCAAGACCCCTGTT+TGG + chr2.3:4560593-4560612 MS.gene032173:CDS 40.0%
ATGGAAAGAAGCTGTAGATG+GGG + chr2.3:4560681-4560700 MS.gene032173:CDS 40.0%
GCGATAATACTGTTAAGGTG+TGG + chr2.3:4560377-4560396 MS.gene032173:CDS 40.0%
GTATTTACTGCAAAGGCAGA+TGG + chr2.3:4560217-4560236 MS.gene032173:CDS 40.0%
GTCTGTGAATTCAGTTGCTT+GGG + chr2.3:4560138-4560157 MS.gene032173:CDS 40.0%
! AATATATTGGCTGTGGCTGA+TGG + chr2.3:4560640-4560659 MS.gene032173:CDS 40.0%
! ATATGGACTGTTGGCAAAGA+AGG + chr2.3:4560544-4560563 MS.gene032173:CDS 40.0%
! CATTATGCATCTGAAGTGCA+GGG - chr2.3:4560438-4560457 None:intergenic 40.0%
! GACAGGAAATATATTGGCTG+TGG + chr2.3:4560633-4560652 MS.gene032173:CDS 40.0%
! GAGCTTGGATCCATTCATTT+TGG - chr2.3:4560096-4560115 None:intergenic 40.0%
! TATGGACTGTTGGCAAAGAA+GGG + chr2.3:4560545-4560564 MS.gene032173:CDS 40.0%
! TCATTATGCATCTGAAGTGC+AGG - chr2.3:4560439-4560458 None:intergenic 40.0%
AAACAGAAGTCACGCCAACT+GGG - chr2.3:4560276-4560295 None:intergenic 45.0%
AAAGAAGGGGATCATTGGGA+AGG + chr2.3:4560559-4560578 MS.gene032173:CDS 45.0%
AAGAAGCTGTAGATGGGGAA+TGG + chr2.3:4560686-4560705 MS.gene032173:CDS 45.0%
AAGGTGTGGAAGCTTAGCAA+TGG + chr2.3:4560391-4560410 MS.gene032173:CDS 45.0%
ACCATGATACCCTCCAAACA+GGG - chr2.3:4560609-4560628 None:intergenic 45.0%
ATTGATCAAGCTCACCCAGT+TGG + chr2.3:4560259-4560278 MS.gene032173:CDS 45.0%
ATTGGGTTCGAGATGTTGCT+TGG + chr2.3:4560458-4560477 MS.gene032173:CDS 45.0%
ATTTCAAGACCCCTGTTTGG+AGG + chr2.3:4560596-4560615 MS.gene032173:CDS 45.0%
CAGCATCTAGCAACTTTGAC+TGG + chr2.3:4559965-4559984 MS.gene032173:CDS 45.0%
CATAGGAACATGAAGCGAGA+AGG - chr2.3:4560042-4560061 None:intergenic 45.0%
CCTTCTCAGAAGGTTGAAAC+CGG + chr2.3:4559833-4559852 MS.gene032173:CDS 45.0%
CGAGAAGGGAACCAAACTTA+GGG - chr2.3:4560027-4560046 None:intergenic 45.0%
CGTCTGTGAATTCAGTTGCT+TGG + chr2.3:4560137-4560156 MS.gene032173:CDS 45.0%
CTCGCTTCATGTTCCTATGA+CGG + chr2.3:4560043-4560062 MS.gene032173:CDS 45.0%
GCTCATCAAAGACATGAGCT+TGG - chr2.3:4560111-4560130 None:intergenic 45.0%
GTGAGCTTGATCAATCCTTG+AGG - chr2.3:4560254-4560273 None:intergenic 45.0%
TAGCAATGGACAGTGGAAGA+TGG + chr2.3:4560405-4560424 MS.gene032173:CDS 45.0%
TGGCAAAGAAGGGGATCATT+GGG + chr2.3:4560555-4560574 MS.gene032173:CDS 45.0%
TGTTTCTTGGGCTCCTTCAA+TGG + chr2.3:4560291-4560310 MS.gene032173:CDS 45.0%
TTGGCAAAGAAGGGGATCAT+TGG + chr2.3:4560554-4560573 MS.gene032173:CDS 45.0%
TTTACTGCAAAGGCAGATGG+TGG + chr2.3:4560220-4560239 MS.gene032173:CDS 45.0%
TTTCAAGACCCCTGTTTGGA+GGG + chr2.3:4560597-4560616 MS.gene032173:CDS 45.0%
! AGGGTATCATGGTCTTTGAC+AGG + chr2.3:4560616-4560635 MS.gene032173:CDS 45.0%
! ATGGACTGTTGGCAAAGAAG+GGG + chr2.3:4560546-4560565 MS.gene032173:CDS 45.0%
! CAACTTTGACTGGTCACCAA+GGG + chr2.3:4559975-4559994 MS.gene032173:CDS 45.0%
! TGGCGTGACTTCTGTTTCTT+GGG + chr2.3:4560279-4560298 MS.gene032173:CDS 45.0%
! TTGGCGTGACTTCTGTTTCT+TGG + chr2.3:4560278-4560297 MS.gene032173:CDS 45.0%
! TTGGGTTCGAGATGTTGCTT+GGG + chr2.3:4560459-4560478 MS.gene032173:CDS 45.0%
AAGAATGACGCGTCCGTCAT+AGG - chr2.3:4560059-4560078 None:intergenic 50.0%
AAGCAGAGACCCAACTCATG+AGG - chr2.3:4560166-4560185 None:intergenic 50.0%
ATGGCAACAGGTGACAACAG+TGG + chr2.3:4560705-4560724 MS.gene032173:CDS 50.0%
ATTGCTAGTGCGTCGCAAGA+CGG + chr2.3:4560511-4560530 MS.gene032173:CDS 50.0%
CCATGATACCCTCCAAACAG+GGG - chr2.3:4560608-4560627 None:intergenic 50.0%
GAAACAGAAGTCACGCCAAC+TGG - chr2.3:4560277-4560296 None:intergenic 50.0%
GACCATGATACCCTCCAAAC+AGG - chr2.3:4560610-4560629 None:intergenic 50.0%
GAGGCTAGCAACAGCATCAT+CGG + chr2.3:4559901-4559920 MS.gene032173:CDS 50.0%
GCGAGAAGGGAACCAAACTT+AGG - chr2.3:4560028-4560047 None:intergenic 50.0%
GGAAGCTTAGCAATGGACAG+TGG + chr2.3:4560398-4560417 MS.gene032173:CDS 50.0%
TGTAGATGGGGAATGGCAAC+AGG + chr2.3:4560693-4560712 MS.gene032173:CDS 50.0%
! ACGCGTCATTCTTTGGAAGG+AGG + chr2.3:4560066-4560085 MS.gene032173:CDS 50.0%
! CCGGTTTCAACCTTCTGAGA+AGG - chr2.3:4559836-4559855 None:intergenic 50.0%
! CGCGTCATTCTTTGGAAGGA+GGG + chr2.3:4560067-4560086 MS.gene032173:CDS 50.0%
! GCAACTTTGACTGGTCACCA+AGG + chr2.3:4559974-4559993 MS.gene032173:CDS 50.0%
! TCATGAGTTGGGTCTCTGCT+TGG + chr2.3:4560165-4560184 MS.gene032173:CDS 50.0%
! TGGCTTGTGCTTCGTCTGAT+GGG + chr2.3:4560185-4560204 MS.gene032173:CDS 50.0%
!! ATGACGGACGCGTCATTCTT+TGG + chr2.3:4560059-4560078 MS.gene032173:CDS 50.0%
!! GTTGCTTGGGCACCGAATTT+GGG + chr2.3:4560472-4560491 MS.gene032173:CDS 50.0%
!! TGCAAAGGCAGATGGTGGAT+GGG + chr2.3:4560225-4560244 MS.gene032173:CDS 50.0%
!! TGTTGCTTGGGCACCGAATT+TGG + chr2.3:4560471-4560490 MS.gene032173:CDS 50.0%
!! TTGGCTTGTGCTTCGTCTGA+TGG + chr2.3:4560184-4560203 MS.gene032173:CDS 50.0%
AGGGGATCATTGGGAAGGCA+AGG + chr2.3:4560564-4560583 MS.gene032173:CDS 55.0%
CCAGAGCAAAGCTTCTGCAC+AGG - chr2.3:4560352-4560371 None:intergenic 55.0%
CCTGTGCAGAAGCTTTGCTC+TGG + chr2.3:4560349-4560368 MS.gene032173:CDS 55.0%
CGGACGCGTCATTCTTTGGA+AGG + chr2.3:4560063-4560082 MS.gene032173:CDS 55.0%
GTGCAGAAGCTTTGCTCTGG+TGG + chr2.3:4560352-4560371 MS.gene032173:CDS 55.0%
TGGTCACCAAGGGCCTGTTT+GGG + chr2.3:4559985-4560004 MS.gene032173:CDS 55.0%
!! ATGGTGGATGGGACACCTCA+AGG + chr2.3:4560236-4560255 MS.gene032173:CDS 55.0%
!! CCCCTGTTTGGAGGGTATCA+TGG + chr2.3:4560605-4560624 MS.gene032173:CDS 55.0%
!! CCTGAACCAACAAGAGCACC+CGG - chr2.3:4560319-4560338 None:intergenic 55.0%
!! CTGCAAAGGCAGATGGTGGA+TGG + chr2.3:4560224-4560243 MS.gene032173:CDS 55.0%
CAACCTCCCAAACAGGCCCT+TGG - chr2.3:4559994-4560013 None:intergenic 60.0%
CTGGTCACCAAGGGCCTGTT+TGG + chr2.3:4559984-4560003 MS.gene032173:CDS 60.0%
GCCTGTTTGGGAGGTTGCGT+GGG + chr2.3:4559997-4560016 MS.gene032173:CDS 60.0%
GCGTGGGCTCACCCTAAGTT+TGG + chr2.3:4560013-4560032 MS.gene032173:CDS 60.0%
GCTTGGGCGCCTCATGAGTT+GGG + chr2.3:4560154-4560173 MS.gene032173:CDS 60.0%
TCACCAAGGGCCTGTTTGGG+AGG + chr2.3:4559988-4560007 MS.gene032173:CDS 60.0%
TGCTTGGGCGCCTCATGAGT+TGG + chr2.3:4560153-4560172 MS.gene032173:CDS 60.0%
TTGGGCTCCTTCAATGGCGC+CGG + chr2.3:4560297-4560316 MS.gene032173:CDS 60.0%
!! CCGGGTGCTCTTGTTGGTTC+AGG + chr2.3:4560316-4560335 MS.gene032173:CDS 60.0%
GCCCACGCAACCTCCCAAAC+AGG - chr2.3:4560001-4560020 None:intergenic 65.0%
GGCCTGTTTGGGAGGTTGCG+TGG + chr2.3:4559996-4560015 MS.gene032173:CDS 65.0%
TGGGCTCCTTCAATGGCGCC+GGG + chr2.3:4560298-4560317 MS.gene032173:CDS 65.0%
! AGAGCACCCGGCGCCATTGA+AGG - chr2.3:4560307-4560326 None:intergenic 65.0%
! ATGGCGCCGGGTGCTCTTGT+TGG + chr2.3:4560310-4560329 MS.gene032173:CDS 65.0%


Chromosome Type Strat End Strand Name
chr2.3 gene 4559830 4560735 4559830 ID=MS.gene032173
chr2.3 mRNA 4559830 4560735 4559830 ID=MS.gene032173.t1;Parent=MS.gene032173
chr2.3 exon 4559830 4560735 4559830 ID=MS.gene032173.t1.exon1;Parent=MS.gene032173.t1
chr2.3 CDS 4559830 4560735 4559830 ID=cds.MS.gene032173.t1;Parent=MS.gene032173.t1
Gene Sequence

>MS.gene032173

ATGCCTTCTCAGAAGGTTGAAACCGGTCATCAAGACATAATCCATGATGTTGCAATGGATTACTATGGAAAGAGGCTAGCAACAGCATCATCGGATCACACAATTAAGATAATTGGTGTAAGCAATTCAGCTTCTCAGCATCTAGCAACTTTGACTGGTCACCAAGGGCCTGTTTGGGAGGTTGCGTGGGCTCACCCTAAGTTTGGTTCCCTTCTCGCTTCATGTTCCTATGACGGACGCGTCATTCTTTGGAAGGAGGGTAACCAAAATGAATGGATCCAAGCTCATGTCTTTGATGAGCATAAGTCGTCTGTGAATTCAGTTGCTTGGGCGCCTCATGAGTTGGGTCTCTGCTTGGCTTGTGCTTCGTCTGATGGGAATATTTCGGTATTTACTGCAAAGGCAGATGGTGGATGGGACACCTCAAGGATTGATCAAGCTCACCCAGTTGGCGTGACTTCTGTTTCTTGGGCTCCTTCAATGGCGCCGGGTGCTCTTGTTGGTTCAGGATTACTTGATCCTGTGCAGAAGCTTTGCTCTGGTGGTTGCGATAATACTGTTAAGGTGTGGAAGCTTAGCAATGGACAGTGGAAGATGGATTGCTTCCCTGCACTTCAGATGCATAATGATTGGGTTCGAGATGTTGCTTGGGCACCGAATTTGGGACTTCCTAAATCTACTATTGCTAGTGCGTCGCAAGACGGTAAAGTGATCATATGGACTGTTGGCAAAGAAGGGGATCATTGGGAAGGCAAGGTTTTGAATGATTTCAAGACCCCTGTTTGGAGGGTATCATGGTCTTTGACAGGAAATATATTGGCTGTGGCTGATGGAAACAACAATGTCACATTATGGAAAGAAGCTGTAGATGGGGAATGGCAACAGGTGACAACAGTGGAGCCATAG
Protein sequence

>MS.gene032173.t1

MPSQKVETGHQDIIHDVAMDYYGKRLATASSDHTIKIIGVSNSASQHLATLTGHQGPVWEVAWAHPKFGSLLASCSYDGRVILWKEGNQNEWIQAHVFDEHKSSVNSVAWAPHELGLCLACASSDGNISVFTAKADGGWDTSRIDQAHPVGVTSVSWAPSMAPGALVGSGLLDPVQKLCSGGCDNTVKVWKLSNGQWKMDCFPALQMHNDWVRDVAWAPNLGLPKSTIASASQDGKVIIWTVGKEGDHWEGKVLNDFKTPVWRVSWSLTGNILAVADGNNNVTLWKEAVDGEWQQVTTVEP