AlfalfaGEDB | MS.gene98722

M. sativa cultivar XinJiangDaYe / MS.gene98722

KEGG: K14004
GO: GO:0003674 GO:0005488 GO:0005515
PFAM: PF00400.35 PF12894.10

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene98722.t1	PNX74154.1	98.7	301	4	0	1	301	1	301	3.30E-136	494.6

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene98722.t1	O64740	79.1	302	62	1	1	301	1	302	6.8e-98	358.6

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene98722.t1	A0A2K3L6J4	98.7	301	4	0	1	301	1	301	2.4e-136	494.6

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene050305	MS.gene98722	0.818307	2.10E-52	-1.69E-46
MS.gene050577	MS.gene98722	-0.820079	8.29E-53	-1.69E-46
MS.gene051761	MS.gene98722	0.809571	1.77E-50	-1.69E-46
MS.gene052015	MS.gene98722	0.962973	1.61E-121	-1.69E-46
MS.gene052486	MS.gene98722	-0.802641	5.09E-49	-1.69E-46
MS.gene052494	MS.gene98722	0.837967	3.80E-57	-1.69E-46
MS.gene053203	MS.gene98722	-0.806597	7.62E-50	-1.69E-46
MS.gene05470	MS.gene98722	-0.818346	2.06E-52	-1.69E-46
MS.gene05837	MS.gene98722	-0.801557	8.51E-49	-1.69E-46
MS.gene058544	MS.gene98722	-0.800277	1.55E-48	-1.69E-46
MS.gene059103	MS.gene98722	0.874451	6.69E-68	-1.69E-46
MS.gene059480	MS.gene98722	0.879294	1.40E-69	-1.69E-46
MS.gene06077	MS.gene98722	-0.813661	2.29E-51	-1.69E-46

PPI:

Gene1	Gene2	Type
MS.gene030377	MS.gene98722	PPI
MS.gene98722	MS.gene70974	PPI
MS.gene98722	MS.gene59349	PPI
MS.gene98722	MS.gene035806	PPI
MS.gene052015	MS.gene98722	PPI
MS.gene032173	MS.gene98722	PPI
MS.gene98722	MS.gene010482	PPI
MS.gene98722	MS.gene73118	PPI
MS.gene064541	MS.gene98722	PPI
MS.gene73118	MS.gene98722	PPI
MS.gene70974	MS.gene98722	PPI
MS.gene85280	MS.gene98722	PPI
MS.gene047763	MS.gene98722	PPI
MS.gene98722	MS.gene72123	PPI
MS.gene98722	MS.gene048821	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene98722.t1	MTR_3g054090	98.339	301	5	0	1	301	1	301	0.0	603
MS.gene98722.t1	MTR_6g072020	26.433	314	194	9	20	301	18	326	1.43e-17	82.0
MS.gene98722.t1	MTR_7g104550	25.397	252	155	10	46	286	7	236	1.63e-12	67.4
MS.gene98722.t1	MTR_5g016370	24.590	305	155	13	23	284	318	590	2.87e-12	67.4
MS.gene98722.t1	MTR_4g095058	27.660	235	134	10	54	284	371	573	5.89e-12	66.2
MS.gene98722.t1	MTR_4g095058	27.660	235	134	10	54	284	369	571	6.21e-12	66.2

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene98722.t1	AT2G30050	84.768	302	45	1	1	301	1	302	0.0	531
MS.gene98722.t1	AT3G01340	82.119	302	53	1	1	301	1	302	0.0	521
MS.gene98722.t1	AT3G01340	82.119	302	53	1	1	301	1	302	0.0	521
MS.gene98722.t1	AT4G02730	27.165	254	149	11	46	298	34	252	1.03e-12	68.2
MS.gene98722.t1	AT1G64350	25.180	278	167	11	55	301	56	323	2.71e-12	66.6
MS.gene98722.t1	AT2G26060	27.490	251	148	12	47	285	12	240	2.58e-11	63.9
MS.gene98722.t1	AT2G26060	27.016	248	149	8	4	240	14	240	8.55e-11	62.4

Find 108 sgRNAs with CRISPR-Local

Find 107 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TGTTGCTTGGGCACCGAATT+TGG	0.171644	2.1:+5544534	MS.gene98722:CDS
GAGCTTGGATCCATTCATTT+TGG	0.222798	2.1:-5544156	None:intergenic
TTGGTGTGACTTCTGTTTCT+TGG	0.229774	2.1:+5544341	MS.gene98722:CDS
CTGGTCACCAAGGGCCTGTT+TGG	0.241942	2.1:+5544047	MS.gene98722:CDS
ATGACGGACGCGTCATTCTT+TGG	0.264898	2.1:+5544122	MS.gene98722:CDS
CCGGGTGCTCTTGTTGGTTC+AGG	0.273284	2.1:+5544379	MS.gene98722:CDS
GAAACAACAATGTCACATTA+TGG	0.309368	2.1:+5544725	MS.gene98722:CDS
GATCACACAATTAAGATAAT+TGG	0.313304	2.1:+5543986	MS.gene98722:CDS
GCACTAGCAATAGTAGATTT+AGG	0.318347	2.1:-5544562	None:intergenic
GTCTTTGACAGGAAATATAT+TGG	0.319441	2.1:+5544690	MS.gene98722:CDS
CACTTCAGATGCATAATGAT+TGG	0.332563	2.1:+5544503	MS.gene98722:CDS
TGTTTCTTGGGCTCCTTCAA+TGG	0.345050	2.1:+5544354	MS.gene98722:CDS
GTCTGTGAATTCAGTTGCTT+GGG	0.353330	2.1:+5544201	MS.gene98722:CDS
GTTGCTTGGGCACCGAATTT+GGG	0.355435	2.1:+5544535	MS.gene98722:CDS
TGGTGTGACTTCTGTTTCTT+GGG	0.358030	2.1:+5544342	MS.gene98722:CDS
GAAACAGAAGTCACACCAAC+TGG	0.367413	2.1:-5544337	None:intergenic
AAGAATGACGCGTCCGTCAT+AGG	0.368314	2.1:-5544119	None:intergenic
GACCATGATACCCTCCAAAC+AGG	0.377638	2.1:-5544670	None:intergenic
ATGGCGCCGGGTGCTCTTGT+TGG	0.389540	2.1:+5544373	MS.gene98722:CDS
TTGGCAAAGAAGGGGATCAT+TGG	0.390865	2.1:+5544617	MS.gene98722:CDS
TGCTTGGGCGCCTCATGAGT+TGG	0.404443	2.1:+5544216	MS.gene98722:CDS
TTGGGCTCCTTCAATGGCGC+CGG	0.406041	2.1:+5544360	MS.gene98722:CDS
TTGGCTTGTGCTTCGTCTGA+TGG	0.406467	2.1:+5544247	MS.gene98722:CDS
TGGTCACCAAGGGCCTGTTT+GGG	0.409839	2.1:+5544048	MS.gene98722:CDS
GCTTGGGCGCCTCATGAGTT+GGG	0.412397	2.1:+5544217	MS.gene98722:CDS
GCGTGGGCTCACCCTAAGTT+TGG	0.412765	2.1:+5544076	MS.gene98722:CDS
GCCTGTTTGGGAGGTTGCGT+GGG	0.414310	2.1:+5544060	MS.gene98722:CDS
CGTCTGTGAATTCAGTTGCT+TGG	0.416920	2.1:+5544200	MS.gene98722:CDS
ATGATTTCAAGACCCCTGTT+TGG	0.434543	2.1:+5544656	MS.gene98722:CDS
TGGGCTCCTTCAATGGCGCC+GGG	0.435343	2.1:+5544361	MS.gene98722:CDS
GGCCTGTTTGGGAGGTTGCG+TGG	0.439174	2.1:+5544059	MS.gene98722:CDS
TTATGGAAAGAAGCTGTAGA+TGG	0.441647	2.1:+5544742	MS.gene98722:CDS
TCATGAGTTGGGTCTCTGCT+TGG	0.444150	2.1:+5544228	MS.gene98722:CDS
ATATGGACTGTTGGCAAAGA+AGG	0.444237	2.1:+5544607	MS.gene98722:CDS
GATTTAGGAAGTCCCAAATT+CGG	0.447910	2.1:-5544547	None:intergenic
GCCCACGCAACCTCCCAAAC+AGG	0.450330	2.1:-5544061	None:intergenic
AGAGCACCCGGCGCCATTGA+AGG	0.456543	2.1:-5544367	None:intergenic
GTGCAGAAGCTTTGCTCTGG+TGG	0.463692	2.1:+5544415	MS.gene98722:CDS
TGTAGATGGGGAATGGCAAC+AGG	0.465699	2.1:+5544756	MS.gene98722:CDS
TTCGTCTGATGGGAATATTT+CGG	0.470361	2.1:+5544258	MS.gene98722:CDS
ATGGATTATGTCTTGATGAC+CGG	0.472610	2.1:-5543915	None:intergenic
TCATTATGCATCTGAAGTGC+AGG	0.475699	2.1:-5544499	None:intergenic
GCGAGAAGGGAACCAAACTT+AGG	0.477573	2.1:-5544088	None:intergenic
CCCCTGTTTGGAGGGTATCA+TGG	0.478267	2.1:+5544668	MS.gene98722:CDS
TGGCTTGTGCTTCGTCTGAT+GGG	0.479615	2.1:+5544248	MS.gene98722:CDS
GATGTTGCAATGGATTACTA+TGG	0.484612	2.1:+5543938	MS.gene98722:CDS
ACTTCAGATGCATAATGATT+GGG	0.487890	2.1:+5544504	MS.gene98722:CDS
TGGCAAAGAAGGGGATCATT+GGG	0.491121	2.1:+5544618	MS.gene98722:CDS
CTGCAAAGGCAGATGGTGGA+TGG	0.503412	2.1:+5544287	MS.gene98722:CDS
CCTGTGCAGAAGCTTTGCTC+TGG	0.505097	2.1:+5544412	MS.gene98722:CDS
CAGCATCTAGCAACTTTGAC+TGG	0.508215	2.1:+5544028	MS.gene98722:CDS
ATTGGGTTCGAGATGTTGCT+TGG	0.510278	2.1:+5544521	MS.gene98722:CDS
CGCGTCATTCTTTGGAAGGA+GGG	0.511398	2.1:+5544130	MS.gene98722:CDS
AATATATTGGCTGTGGCTGA+TGG	0.512420	2.1:+5544703	MS.gene98722:CDS
TTGGGTTCGAGATGTTGCTT+GGG	0.517736	2.1:+5544522	MS.gene98722:CDS
CCTTCTCAGAAGGTTGAAAC+CGG	0.519832	2.1:+5543896	MS.gene98722:CDS
TATGGAAAGAAGCTGTAGAT+GGG	0.520145	2.1:+5544743	MS.gene98722:CDS
CAACCTCCCAAACAGGCCCT+TGG	0.520290	2.1:-5544054	None:intergenic
AGTAATCCATTGCAACATCA+TGG	0.520730	2.1:-5543934	None:intergenic
TCACCAAGGGCCTGTTTGGG+AGG	0.524084	2.1:+5544051	MS.gene98722:CDS
AGGGTATCATGGTCTTTGAC+AGG	0.524931	2.1:+5544679	MS.gene98722:CDS
AAGACGGTAAAGTGATCATA+TGG	0.528476	2.1:+5544590	MS.gene98722:CDS
TATGGACTGTTGGCAAAGAA+GGG	0.531973	2.1:+5544608	MS.gene98722:CDS
AGGAGGGTAACCAAAATGAA+TGG	0.536407	2.1:+5544146	MS.gene98722:CDS
TAGCAATGGACAGTGGAAGA+TGG	0.537404	2.1:+5544468	MS.gene98722:CDS
ATTTCAAGACCCCTGTTTGG+AGG	0.539676	2.1:+5544659	MS.gene98722:CDS
TGGTTGCGATAATACTGTTA+AGG	0.541340	2.1:+5544435	MS.gene98722:CDS
CGAGAAGGGAACCAAACTTA+GGG	0.543581	2.1:-5544087	None:intergenic
GAGGCTAGCAACAGCATCAT+CGG	0.547815	2.1:+5543964	MS.gene98722:CDS
CAGAAACATGCCTTCTCAGA+AGG	0.548126	2.1:+5543886	None:intergenic
GTATTTACTGCAAAGGCAGA+TGG	0.549821	2.1:+5544280	MS.gene98722:CDS
GACAGGAAATATATTGGCTG+TGG	0.552846	2.1:+5544696	MS.gene98722:CDS
GCTCATCAAAGACATGAGCT+TGG	0.554760	2.1:-5544171	None:intergenic
CATAGGAACATGAAGCGAGA+AGG	0.556637	2.1:-5544102	None:intergenic
AGGGGATCATTGGGAAGGCA+AGG	0.557835	2.1:+5544627	MS.gene98722:CDS
CAATGGATTACTATGGAAAG+AGG	0.559724	2.1:+5543945	MS.gene98722:CDS
CATAATCCATGATGTTGCAA+TGG	0.560125	2.1:+5543928	MS.gene98722:CDS
CTCGCTTCATGTTCCTATGA+CGG	0.561648	2.1:+5544106	MS.gene98722:CDS
CCGGTTTCAACCTTCTGAGA+AGG	0.569075	2.1:-5543896	None:intergenic
TTTCAAGACCCCTGTTTGGA+GGG	0.570292	2.1:+5544660	MS.gene98722:CDS
AAAGTGATCATATGGACTGT+TGG	0.571303	2.1:+5544598	MS.gene98722:CDS
CGGACGCGTCATTCTTTGGA+AGG	0.574371	2.1:+5544126	MS.gene98722:CDS
TGCAAAGGCAGATGGTGGAT+GGG	0.576134	2.1:+5544288	MS.gene98722:CDS
TATTTCGGTATTTACTGCAA+AGG	0.580846	2.1:+5544273	MS.gene98722:CDS
ACGCGTCATTCTTTGGAAGG+AGG	0.581061	2.1:+5544129	MS.gene98722:CDS
CCAGAGCAAAGCTTCTGCAC+AGG	0.586753	2.1:-5544412	None:intergenic
ACCATGATACCCTCCAAACA+GGG	0.587238	2.1:-5544669	None:intergenic
ATGGTGGATGGGACACCTCA+AGG	0.588008	2.1:+5544299	MS.gene98722:CDS
ATTGCTAGTGCGTCGCAAGA+CGG	0.588884	2.1:+5544574	MS.gene98722:CDS
AAGAAGCTGTAGATGGGGAA+TGG	0.590067	2.1:+5544749	MS.gene98722:CDS
ATAGGAACATGAAGCGAGAA+GGG	0.592233	2.1:-5544101	None:intergenic
CCTGAACCAACAAGAGCACC+CGG	0.595135	2.1:-5544379	None:intergenic
AAGCAGAGACCCAACTCATG+AGG	0.602443	2.1:-5544226	None:intergenic
TTTACTGCAAAGGCAGATGG+TGG	0.615017	2.1:+5544283	MS.gene98722:CDS
CATTATGCATCTGAAGTGCA+GGG	0.623511	2.1:-5544498	None:intergenic
ATTGATCAAGCTCACCCAGT+TGG	0.626929	2.1:+5544322	MS.gene98722:CDS
CAACTTTGACTGGTCACCAA+GGG	0.628577	2.1:+5544038	MS.gene98722:CDS
ATGGAAAGAAGCTGTAGATG+GGG	0.635633	2.1:+5544744	MS.gene98722:CDS
ATGGACTGTTGGCAAAGAAG+GGG	0.637383	2.1:+5544609	MS.gene98722:CDS
AAACAGAAGTCACACCAACT+GGG	0.643078	2.1:-5544336	None:intergenic
GCAACTTTGACTGGTCACCA+AGG	0.656777	2.1:+5544037	MS.gene98722:CDS
AAGGTGTGGAAGCTTAGCAA+TGG	0.658169	2.1:+5544454	MS.gene98722:CDS
GTGAGCTTGATCAATCCTTG+AGG	0.660407	2.1:-5544314	None:intergenic
GCGATAATACTGTTAAGGTG+TGG	0.664994	2.1:+5544440	MS.gene98722:CDS
AAAGAAGGGGATCATTGGGA+AGG	0.667803	2.1:+5544622	MS.gene98722:CDS
GGAAGCTTAGCAATGGACAG+TGG	0.684704	2.1:+5544461	MS.gene98722:CDS
ATGGCAACAGGTGACAACAG+TGG	0.686621	2.1:+5544768	MS.gene98722:CDS
CCATGATACCCTCCAAACAG+GGG	0.724647	2.1:-5544668	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!	GATCACACAATTAAGATAAT+TGG	+	chr2.1:5543986-5544005	MS.gene98722:CDS	25.0%
	ACTTCAGATGCATAATGATT+GGG	+	chr2.1:5544504-5544523	MS.gene98722:CDS	30.0%
	GAAACAACAATGTCACATTA+TGG	+	chr2.1:5544725-5544744	MS.gene98722:CDS	30.0%
	GTCTTTGACAGGAAATATAT+TGG	+	chr2.1:5544690-5544709	MS.gene98722:CDS	30.0%
	TATTTCGGTATTTACTGCAA+AGG	+	chr2.1:5544273-5544292	MS.gene98722:CDS	30.0%
	AAGACGGTAAAGTGATCATA+TGG	+	chr2.1:5544590-5544609	MS.gene98722:CDS	35.0%
	AGTAATCCATTGCAACATCA+TGG	-	chr2.1:5543937-5543956	None:intergenic	35.0%
	CACTTCAGATGCATAATGAT+TGG	+	chr2.1:5544503-5544522	MS.gene98722:CDS	35.0%
	CATAATCCATGATGTTGCAA+TGG	+	chr2.1:5543928-5543947	MS.gene98722:CDS	35.0%
	GATTTAGGAAGTCCCAAATT+CGG	-	chr2.1:5544550-5544569	None:intergenic	35.0%
	GCACTAGCAATAGTAGATTT+AGG	-	chr2.1:5544565-5544584	None:intergenic	35.0%
	TATGGAAAGAAGCTGTAGAT+GGG	+	chr2.1:5544743-5544762	MS.gene98722:CDS	35.0%
	TGGTTGCGATAATACTGTTA+AGG	+	chr2.1:5544435-5544454	MS.gene98722:CDS	35.0%
	TTATGGAAAGAAGCTGTAGA+TGG	+	chr2.1:5544742-5544761	MS.gene98722:CDS	35.0%
	TTCGTCTGATGGGAATATTT+CGG	+	chr2.1:5544258-5544277	MS.gene98722:CDS	35.0%
!	AAAGTGATCATATGGACTGT+TGG	+	chr2.1:5544598-5544617	MS.gene98722:CDS	35.0%
!	ATGGATTATGTCTTGATGAC+CGG	-	chr2.1:5543918-5543937	None:intergenic	35.0%
!!	CAATGGATTACTATGGAAAG+AGG	+	chr2.1:5543945-5543964	MS.gene98722:CDS	35.0%
!!	GATGTTGCAATGGATTACTA+TGG	+	chr2.1:5543938-5543957	MS.gene98722:CDS	35.0%
	AAACAGAAGTCACACCAACT+GGG	-	chr2.1:5544339-5544358	None:intergenic	40.0%
	AGGAGGGTAACCAAAATGAA+TGG	+	chr2.1:5544146-5544165	MS.gene98722:CDS	40.0%
	ATAGGAACATGAAGCGAGAA+GGG	-	chr2.1:5544104-5544123	None:intergenic	40.0%
	ATGATTTCAAGACCCCTGTT+TGG	+	chr2.1:5544656-5544675	MS.gene98722:CDS	40.0%
	ATGGAAAGAAGCTGTAGATG+GGG	+	chr2.1:5544744-5544763	MS.gene98722:CDS	40.0%
	GCGATAATACTGTTAAGGTG+TGG	+	chr2.1:5544440-5544459	MS.gene98722:CDS	40.0%
	GTATTTACTGCAAAGGCAGA+TGG	+	chr2.1:5544280-5544299	MS.gene98722:CDS	40.0%
	GTCTGTGAATTCAGTTGCTT+GGG	+	chr2.1:5544201-5544220	MS.gene98722:CDS	40.0%
!	AATATATTGGCTGTGGCTGA+TGG	+	chr2.1:5544703-5544722	MS.gene98722:CDS	40.0%
!	ATATGGACTGTTGGCAAAGA+AGG	+	chr2.1:5544607-5544626	MS.gene98722:CDS	40.0%
!	CATTATGCATCTGAAGTGCA+GGG	-	chr2.1:5544501-5544520	None:intergenic	40.0%
!	GACAGGAAATATATTGGCTG+TGG	+	chr2.1:5544696-5544715	MS.gene98722:CDS	40.0%
!	GAGCTTGGATCCATTCATTT+TGG	-	chr2.1:5544159-5544178	None:intergenic	40.0%
!	TATGGACTGTTGGCAAAGAA+GGG	+	chr2.1:5544608-5544627	MS.gene98722:CDS	40.0%
!	TCATTATGCATCTGAAGTGC+AGG	-	chr2.1:5544502-5544521	None:intergenic	40.0%
!	TGGTGTGACTTCTGTTTCTT+GGG	+	chr2.1:5544342-5544361	MS.gene98722:CDS	40.0%
!	TTGGTGTGACTTCTGTTTCT+TGG	+	chr2.1:5544341-5544360	MS.gene98722:CDS	40.0%
	AAAGAAGGGGATCATTGGGA+AGG	+	chr2.1:5544622-5544641	MS.gene98722:CDS	45.0%
	AAGAAGCTGTAGATGGGGAA+TGG	+	chr2.1:5544749-5544768	MS.gene98722:CDS	45.0%
	AAGGTGTGGAAGCTTAGCAA+TGG	+	chr2.1:5544454-5544473	MS.gene98722:CDS	45.0%
	ACCATGATACCCTCCAAACA+GGG	-	chr2.1:5544672-5544691	None:intergenic	45.0%
	ATTGATCAAGCTCACCCAGT+TGG	+	chr2.1:5544322-5544341	MS.gene98722:CDS	45.0%
	ATTGGGTTCGAGATGTTGCT+TGG	+	chr2.1:5544521-5544540	MS.gene98722:CDS	45.0%
	ATTTCAAGACCCCTGTTTGG+AGG	+	chr2.1:5544659-5544678	MS.gene98722:CDS	45.0%
	CAGCATCTAGCAACTTTGAC+TGG	+	chr2.1:5544028-5544047	MS.gene98722:CDS	45.0%
	CATAGGAACATGAAGCGAGA+AGG	-	chr2.1:5544105-5544124	None:intergenic	45.0%
	CCTTCTCAGAAGGTTGAAAC+CGG	+	chr2.1:5543896-5543915	MS.gene98722:CDS	45.0%
	CGAGAAGGGAACCAAACTTA+GGG	-	chr2.1:5544090-5544109	None:intergenic	45.0%
	CGTCTGTGAATTCAGTTGCT+TGG	+	chr2.1:5544200-5544219	MS.gene98722:CDS	45.0%
	CTCGCTTCATGTTCCTATGA+CGG	+	chr2.1:5544106-5544125	MS.gene98722:CDS	45.0%
	GAAACAGAAGTCACACCAAC+TGG	-	chr2.1:5544340-5544359	None:intergenic	45.0%
	GCTCATCAAAGACATGAGCT+TGG	-	chr2.1:5544174-5544193	None:intergenic	45.0%
	GTGAGCTTGATCAATCCTTG+AGG	-	chr2.1:5544317-5544336	None:intergenic	45.0%
	TAGCAATGGACAGTGGAAGA+TGG	+	chr2.1:5544468-5544487	MS.gene98722:CDS	45.0%
	TGGCAAAGAAGGGGATCATT+GGG	+	chr2.1:5544618-5544637	MS.gene98722:CDS	45.0%
	TGTTTCTTGGGCTCCTTCAA+TGG	+	chr2.1:5544354-5544373	MS.gene98722:CDS	45.0%
	TTGGCAAAGAAGGGGATCAT+TGG	+	chr2.1:5544617-5544636	MS.gene98722:CDS	45.0%
	TTTACTGCAAAGGCAGATGG+TGG	+	chr2.1:5544283-5544302	MS.gene98722:CDS	45.0%
	TTTCAAGACCCCTGTTTGGA+GGG	+	chr2.1:5544660-5544679	MS.gene98722:CDS	45.0%
!	AGGGTATCATGGTCTTTGAC+AGG	+	chr2.1:5544679-5544698	MS.gene98722:CDS	45.0%
!	ATGGACTGTTGGCAAAGAAG+GGG	+	chr2.1:5544609-5544628	MS.gene98722:CDS	45.0%
!	CAACTTTGACTGGTCACCAA+GGG	+	chr2.1:5544038-5544057	MS.gene98722:CDS	45.0%
!	TTGGGTTCGAGATGTTGCTT+GGG	+	chr2.1:5544522-5544541	MS.gene98722:CDS	45.0%
	AAGAATGACGCGTCCGTCAT+AGG	-	chr2.1:5544122-5544141	None:intergenic	50.0%
	AAGCAGAGACCCAACTCATG+AGG	-	chr2.1:5544229-5544248	None:intergenic	50.0%
	ATGGCAACAGGTGACAACAG+TGG	+	chr2.1:5544768-5544787	MS.gene98722:CDS	50.0%
	ATTGCTAGTGCGTCGCAAGA+CGG	+	chr2.1:5544574-5544593	MS.gene98722:CDS	50.0%
	CCATGATACCCTCCAAACAG+GGG	-	chr2.1:5544671-5544690	None:intergenic	50.0%
	GACCATGATACCCTCCAAAC+AGG	-	chr2.1:5544673-5544692	None:intergenic	50.0%
	GAGGCTAGCAACAGCATCAT+CGG	+	chr2.1:5543964-5543983	MS.gene98722:CDS	50.0%
	GCGAGAAGGGAACCAAACTT+AGG	-	chr2.1:5544091-5544110	None:intergenic	50.0%
	GGAAGCTTAGCAATGGACAG+TGG	+	chr2.1:5544461-5544480	MS.gene98722:CDS	50.0%
	TGTAGATGGGGAATGGCAAC+AGG	+	chr2.1:5544756-5544775	MS.gene98722:CDS	50.0%
!	ACGCGTCATTCTTTGGAAGG+AGG	+	chr2.1:5544129-5544148	MS.gene98722:CDS	50.0%
!	CCGGTTTCAACCTTCTGAGA+AGG	-	chr2.1:5543899-5543918	None:intergenic	50.0%
!	CGCGTCATTCTTTGGAAGGA+GGG	+	chr2.1:5544130-5544149	MS.gene98722:CDS	50.0%
!	GCAACTTTGACTGGTCACCA+AGG	+	chr2.1:5544037-5544056	MS.gene98722:CDS	50.0%
!	TCATGAGTTGGGTCTCTGCT+TGG	+	chr2.1:5544228-5544247	MS.gene98722:CDS	50.0%
!	TGGCTTGTGCTTCGTCTGAT+GGG	+	chr2.1:5544248-5544267	MS.gene98722:CDS	50.0%
!!	ATGACGGACGCGTCATTCTT+TGG	+	chr2.1:5544122-5544141	MS.gene98722:CDS	50.0%
!!	GTTGCTTGGGCACCGAATTT+GGG	+	chr2.1:5544535-5544554	MS.gene98722:CDS	50.0%
!!	TGCAAAGGCAGATGGTGGAT+GGG	+	chr2.1:5544288-5544307	MS.gene98722:CDS	50.0%
!!	TGTTGCTTGGGCACCGAATT+TGG	+	chr2.1:5544534-5544553	MS.gene98722:CDS	50.0%
!!	TTGGCTTGTGCTTCGTCTGA+TGG	+	chr2.1:5544247-5544266	MS.gene98722:CDS	50.0%
	AGGGGATCATTGGGAAGGCA+AGG	+	chr2.1:5544627-5544646	MS.gene98722:CDS	55.0%
	CCAGAGCAAAGCTTCTGCAC+AGG	-	chr2.1:5544415-5544434	None:intergenic	55.0%
	CCTGTGCAGAAGCTTTGCTC+TGG	+	chr2.1:5544412-5544431	MS.gene98722:CDS	55.0%
	CGGACGCGTCATTCTTTGGA+AGG	+	chr2.1:5544126-5544145	MS.gene98722:CDS	55.0%
	GTGCAGAAGCTTTGCTCTGG+TGG	+	chr2.1:5544415-5544434	MS.gene98722:CDS	55.0%
	TGGTCACCAAGGGCCTGTTT+GGG	+	chr2.1:5544048-5544067	MS.gene98722:CDS	55.0%
!!	ATGGTGGATGGGACACCTCA+AGG	+	chr2.1:5544299-5544318	MS.gene98722:CDS	55.0%
!!	CCCCTGTTTGGAGGGTATCA+TGG	+	chr2.1:5544668-5544687	MS.gene98722:CDS	55.0%
!!	CCTGAACCAACAAGAGCACC+CGG	-	chr2.1:5544382-5544401	None:intergenic	55.0%
!!	CTGCAAAGGCAGATGGTGGA+TGG	+	chr2.1:5544287-5544306	MS.gene98722:CDS	55.0%
	CAACCTCCCAAACAGGCCCT+TGG	-	chr2.1:5544057-5544076	None:intergenic	60.0%
	CTGGTCACCAAGGGCCTGTT+TGG	+	chr2.1:5544047-5544066	MS.gene98722:CDS	60.0%
	GCCTGTTTGGGAGGTTGCGT+GGG	+	chr2.1:5544060-5544079	MS.gene98722:CDS	60.0%
	GCGTGGGCTCACCCTAAGTT+TGG	+	chr2.1:5544076-5544095	MS.gene98722:CDS	60.0%
	GCTTGGGCGCCTCATGAGTT+GGG	+	chr2.1:5544217-5544236	MS.gene98722:CDS	60.0%
	TCACCAAGGGCCTGTTTGGG+AGG	+	chr2.1:5544051-5544070	MS.gene98722:CDS	60.0%
	TGCTTGGGCGCCTCATGAGT+TGG	+	chr2.1:5544216-5544235	MS.gene98722:CDS	60.0%
	TTGGGCTCCTTCAATGGCGC+CGG	+	chr2.1:5544360-5544379	MS.gene98722:CDS	60.0%
!!	CCGGGTGCTCTTGTTGGTTC+AGG	+	chr2.1:5544379-5544398	MS.gene98722:CDS	60.0%
	GCCCACGCAACCTCCCAAAC+AGG	-	chr2.1:5544064-5544083	None:intergenic	65.0%
	GGCCTGTTTGGGAGGTTGCG+TGG	+	chr2.1:5544059-5544078	MS.gene98722:CDS	65.0%
	TGGGCTCCTTCAATGGCGCC+GGG	+	chr2.1:5544361-5544380	MS.gene98722:CDS	65.0%
!	AGAGCACCCGGCGCCATTGA+AGG	-	chr2.1:5544370-5544389	None:intergenic	65.0%
!	ATGGCGCCGGGTGCTCTTGT+TGG	+	chr2.1:5544373-5544392	MS.gene98722:CDS	65.0%

Chromosome	Type	Strat	End	Strand	Name
chr2.1	gene	5543893	5544798	5543893	ID=MS.gene98722
chr2.1	mRNA	5543893	5544798	5543893	ID=MS.gene98722.t1;Parent=MS.gene98722
chr2.1	exon	5543893	5544798	5543893	ID=MS.gene98722.t1.exon1;Parent=MS.gene98722.t1
chr2.1	CDS	5543893	5544798	5543893	ID=cds.MS.gene98722.t1;Parent=MS.gene98722.t1

Gene Sequence

>MS.gene98722

ATGCCTTCTCAGAAGGTTGAAACCGGTCATCAAGACATAATCCATGATGTTGCAATGGATTACTATGGAAAGAGGCTAGCAACAGCATCATCGGATCACACAATTAAGATAATTGGTGTAAGCAATTCAGCTTCTCAGCATCTAGCAACTTTGACTGGTCACCAAGGGCCTGTTTGGGAGGTTGCGTGGGCTCACCCTAAGTTTGGTTCCCTTCTCGCTTCATGTTCCTATGACGGACGCGTCATTCTTTGGAAGGAGGGTAACCAAAATGAATGGATCCAAGCTCATGTCTTTGATGAGCATAAGTCGTCTGTGAATTCAGTTGCTTGGGCGCCTCATGAGTTGGGTCTCTGCTTGGCTTGTGCTTCGTCTGATGGGAATATTTCGGTATTTACTGCAAAGGCAGATGGTGGATGGGACACCTCAAGGATTGATCAAGCTCACCCAGTTGGTGTGACTTCTGTTTCTTGGGCTCCTTCAATGGCGCCGGGTGCTCTTGTTGGTTCAGGATTACTTGATCCTGTGCAGAAGCTTTGCTCTGGTGGTTGCGATAATACTGTTAAGGTGTGGAAGCTTAGCAATGGACAGTGGAAGATGGATTGCTTCCCTGCACTTCAGATGCATAATGATTGGGTTCGAGATGTTGCTTGGGCACCGAATTTGGGACTTCCTAAATCTACTATTGCTAGTGCGTCGCAAGACGGTAAAGTGATCATATGGACTGTTGGCAAAGAAGGGGATCATTGGGAAGGCAAGGTTTTGAATGATTTCAAGACCCCTGTTTGGAGGGTATCATGGTCTTTGACAGGAAATATATTGGCTGTGGCTGATGGAAACAACAATGTCACATTATGGAAAGAAGCTGTAGATGGGGAATGGCAACAGGTGACAACAGTGGAGCCATAG

Protein sequence

>MS.gene98722.t1

MPSQKVETGHQDIIHDVAMDYYGKRLATASSDHTIKIIGVSNSASQHLATLTGHQGPVWEVAWAHPKFGSLLASCSYDGRVILWKEGNQNEWIQAHVFDEHKSSVNSVAWAPHELGLCLACASSDGNISVFTAKADGGWDTSRIDQAHPVGVTSVSWAPSMAPGALVGSGLLDPVQKLCSGGCDNTVKVWKLSNGQWKMDCFPALQMHNDWVRDVAWAPNLGLPKSTIASASQDGKVIIWTVGKEGDHWEGKVLNDFKTPVWRVSWSLTGNILAVADGNNNVTLWKEAVDGEWQQVTTVEP