AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene032194

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene032194.t1 MTR_2g099175 95.536 336 12 1 1 333 1 336 0.0 676
MS.gene032194.t1 MTR_7g086870 44.702 302 153 4 33 332 22 311 5.72e-81 249
MS.gene032194.t1 MTR_7g086820 40.924 303 168 4 33 333 20 313 3.73e-76 236
MS.gene032194.t1 MTR_7g093370 39.286 336 182 8 5 332 50 371 2.36e-75 236
MS.gene032194.t1 MTR_1g054205 41.748 309 167 7 32 332 23 326 2.05e-74 233
MS.gene032194.t1 MTR_5g022870 39.458 332 180 8 4 332 3 316 9.43e-71 223
MS.gene032194.t1 MTR_2g040000 38.182 330 191 5 12 333 8 332 2.17e-69 220
MS.gene032194.t1 MTR_2g029820 37.427 342 192 7 1 332 1 330 2.64e-69 220
MS.gene032194.t1 MTR_8g075100 38.614 303 174 6 33 332 26 319 2.66e-69 219
MS.gene032194.t1 MTR_2g029815 37.758 339 191 8 3 333 5 331 2.85e-69 220
MS.gene032194.t1 MTR_6g027440 40.264 303 171 4 32 332 20 314 1.61e-68 217
MS.gene032194.t1 MTR_2g088770 38.080 323 188 6 15 332 10 325 1.81e-68 217
MS.gene032194.t1 MTR_4g114210 39.871 311 175 5 28 332 16 320 3.18e-67 214
MS.gene032194.t1 MTR_2g008710 37.798 336 191 6 2 332 3 325 3.48e-67 214
MS.gene032194.t1 MTR_4g125940 37.942 311 181 5 30 333 25 330 7.85e-67 213
MS.gene032194.t1 MTR_2g078610 38.182 330 169 7 32 328 75 402 4.51e-66 213
MS.gene032194.t1 MTR_4g046713 38.390 323 189 4 15 332 9 326 4.71e-66 211
MS.gene032194.t1 MTR_7g107520 36.228 334 194 6 3 332 2 320 7.56e-66 210
MS.gene032194.t1 MTR_3g105790 39.264 326 182 6 11 332 9 322 1.69e-65 209
MS.gene032194.t1 MTR_2g029830 37.500 312 177 7 32 333 27 330 4.09e-65 209
MS.gene032194.t1 MTR_2g067440 37.538 325 175 6 32 328 59 383 4.39e-65 210
MS.gene032194.t1 MTR_1g101830 36.890 328 188 7 9 332 10 322 6.68e-65 208
MS.gene032194.t1 MTR_2g077990 37.500 328 174 6 32 328 75 402 8.94e-65 210
MS.gene032194.t1 MTR_5g014100 39.610 308 170 6 36 332 29 331 1.35e-64 207
MS.gene032194.t1 MTR_4g125940 40.580 276 152 5 65 333 5 275 1.61e-64 205
MS.gene032194.t1 MTR_4g133800 40.468 299 167 6 37 333 45 334 3.29e-64 206
MS.gene032194.t1 MTR_5g017850 39.542 306 175 5 32 332 26 326 5.31e-64 206
MS.gene032194.t1 MTR_2g029850 35.976 328 198 6 12 332 8 330 6.62e-64 206
MS.gene032194.t1 MTR_8g076820 37.126 334 177 9 14 332 15 330 7.15e-64 206
MS.gene032194.t1 MTR_2g028980 36.036 333 188 8 11 333 14 331 8.09e-64 206
MS.gene032194.t1 MTR_5g017860 39.869 306 174 5 32 332 26 326 1.71e-63 204
MS.gene032194.t1 MTR_3g092990 37.015 335 193 6 3 332 5 326 2.19e-63 204
MS.gene032194.t1 MTR_1g086320 37.879 330 193 7 11 332 8 333 2.53e-63 204
MS.gene032194.t1 MTR_5g021060 38.284 303 176 6 36 332 33 330 4.76e-63 203
MS.gene032194.t1 MTR_3g094650 37.338 308 174 6 32 332 27 322 8.37e-63 202
MS.gene032194.t1 MTR_5g049280 37.888 322 171 11 28 332 28 337 3.13e-62 201
MS.gene032194.t1 MTR_5g083860 36.170 329 188 7 11 332 12 325 4.66e-62 201
MS.gene032194.t1 MTR_2g029860 35.691 311 182 6 32 332 28 330 9.47e-62 201
MS.gene032194.t1 MTR_2g029800 35.045 331 197 7 12 332 8 330 9.57e-62 201
MS.gene032194.t1 MTR_1g025980 38.333 300 172 7 33 328 24 314 1.76e-61 199
MS.gene032194.t1 MTR_2g029740 34.545 330 204 6 11 333 7 331 3.11e-61 199
MS.gene032194.t1 MTR_7g026990 37.542 301 170 5 37 332 35 322 4.03e-61 198
MS.gene032194.t1 MTR_1g086490 37.838 333 196 5 11 332 8 340 6.89e-61 198
MS.gene032194.t1 MTR_2g029750 34.412 340 207 6 1 333 1 331 1.36e-60 197
MS.gene032194.t1 MTR_7g029030 34.024 338 199 7 1 332 1 320 6.95e-60 195
MS.gene032194.t1 MTR_4g029170 37.785 307 172 7 33 332 27 321 8.13e-60 195
MS.gene032194.t1 MTR_2g029560 37.143 280 164 5 60 332 51 325 2.30e-59 194
MS.gene032194.t1 MTR_2g008160 40.193 311 170 7 30 332 21 323 2.83e-59 193
MS.gene032194.t1 MTR_1g038680 37.785 307 179 7 34 332 30 332 3.02e-59 194
MS.gene032194.t1 MTR_2g078280 36.792 318 170 6 32 318 75 392 5.62e-59 194
MS.gene032194.t1 MTR_4g087965 36.336 333 198 7 5 328 15 342 6.42e-59 193
MS.gene032194.t1 MTR_3g072190 35.207 338 193 6 1 332 1 318 7.93e-59 192
MS.gene032194.t1 MTR_4g132490 35.417 336 200 6 5 332 1 327 1.29e-58 192
MS.gene032194.t1 MTR_5g074860 38.436 307 166 9 33 329 29 322 1.42e-58 192
MS.gene032194.t1 MTR_1g077000 35.522 335 199 4 1 332 7 327 2.30e-58 191
MS.gene032194.t1 MTR_4g083710 36.310 336 189 9 7 332 4 324 3.35e-58 191
MS.gene032194.t1 MTR_2g029830 39.245 265 143 7 79 333 6 262 3.54e-58 189
MS.gene032194.t1 MTR_3g094630 36.585 328 185 7 12 332 11 322 3.69e-58 191
MS.gene032194.t1 MTR_4g029200 35.897 312 180 6 29 332 39 338 4.36e-58 191
MS.gene032194.t1 MTR_2g029730 37.857 280 162 4 60 332 52 326 5.20e-58 191
MS.gene032194.t1 MTR_1g090760 34.118 340 208 6 1 333 1 331 5.88e-58 190
MS.gene032194.t1 MTR_3g094670 36.280 328 186 7 12 332 11 322 9.27e-58 189
MS.gene032194.t1 MTR_7g072510 32.934 334 197 7 4 332 1 312 4.04e-57 187
MS.gene032194.t1 MTR_4g029180 37.171 304 172 6 36 332 30 321 6.08e-57 187
MS.gene032194.t1 MTR_4g031140 34.426 305 187 5 33 332 28 324 6.71e-57 188
MS.gene032194.t1 MTR_3g466200 34.663 326 193 6 13 332 9 320 7.02e-57 187
MS.gene032194.t1 MTR_1g022970 37.134 307 181 5 33 332 46 347 1.29e-56 187
MS.gene032194.t1 MTR_2g084010 34.756 328 192 7 11 332 7 318 1.32e-56 186
MS.gene032194.t1 MTR_0147s0010 36.422 313 171 6 33 328 77 378 2.32e-56 187
MS.gene032194.t1 MTR_4g030890 35.667 300 180 5 38 332 105 396 2.38e-56 188
MS.gene032194.t1 MTR_1g009750 33.140 344 202 7 1 332 1 328 3.78e-56 186
MS.gene032194.t1 MTR_2g029910 33.828 337 211 6 5 333 1 333 5.48e-56 186
MS.gene032194.t1 MTR_2g084080 33.033 333 202 5 5 332 1 317 6.20e-56 184
MS.gene032194.t1 MTR_5g074970 36.156 307 181 5 32 332 29 326 6.88e-56 185
MS.gene032194.t1 MTR_0155s0040 33.433 335 200 6 1 332 1 315 7.59e-56 184
MS.gene032194.t1 MTR_3g467600 36.637 333 181 10 11 332 11 324 7.65e-56 184
MS.gene032194.t1 MTR_3g092990 35.821 335 186 7 3 332 5 315 8.49e-56 184
MS.gene032194.t1 MTR_2g084020 34.146 328 194 7 11 332 7 318 1.08e-55 184
MS.gene032194.t1 MTR_2g084110 34.451 328 192 7 11 332 7 317 1.56e-55 184
MS.gene032194.t1 MTR_4g127670 36.156 307 184 5 32 332 23 323 1.68e-55 184
MS.gene032194.t1 MTR_6g043460 34.940 332 195 6 11 333 10 329 1.75e-55 184
MS.gene032194.t1 MTR_5g016010 33.657 309 184 5 32 328 26 325 2.43e-55 183
MS.gene032194.t1 MTR_4g122640 36.877 301 177 5 38 332 43 336 7.53e-55 182
MS.gene032194.t1 MTR_2g437770 37.624 303 175 6 33 332 50 341 7.87e-55 182
MS.gene032194.t1 MTR_2g084000 35.061 328 195 8 11 332 4 319 1.13e-54 181
MS.gene032194.t1 MTR_4g029190 37.500 296 170 6 42 332 55 340 1.34e-54 182
MS.gene032194.t1 MTR_2g008730 34.132 334 178 6 4 332 5 301 1.87e-54 180
MS.gene032194.t1 MTR_5g074740 34.743 331 193 9 13 333 5 322 9.56e-54 179
MS.gene032194.t1 MTR_2g084090 33.951 324 195 7 15 332 8 318 1.90e-53 178
MS.gene032194.t1 MTR_5g074760 34.018 341 193 11 3 333 4 322 2.53e-53 178
MS.gene032194.t1 MTR_6g043240 32.934 334 204 7 6 332 11 331 6.83e-53 177
MS.gene032194.t1 MTR_4g074995 35.065 308 171 8 32 332 23 308 1.21e-52 176
MS.gene032194.t1 MTR_4g132110 34.385 317 191 5 24 333 23 329 1.51e-52 176
MS.gene032194.t1 MTR_1g066640 33.550 307 193 4 30 332 24 323 2.40e-52 176
MS.gene032194.t1 MTR_3g466180 36.601 306 177 6 32 332 30 323 3.24e-52 175
MS.gene032194.t1 MTR_1g115900 32.628 331 208 6 7 332 1 321 3.42e-52 175
MS.gene032194.t1 MTR_5g074710 35.256 312 179 9 32 333 24 322 4.56e-52 175
MS.gene032194.t1 MTR_1g066710 32.248 307 197 4 30 332 24 323 4.85e-52 175
MS.gene032194.t1 MTR_2g067450 35.714 308 176 5 32 328 10 306 6.82e-52 174
MS.gene032194.t1 MTR_1g066380 32.787 305 194 4 32 332 26 323 7.59e-51 172
MS.gene032194.t1 MTR_1g066680 33.225 307 193 5 30 332 24 322 1.42e-50 171
MS.gene032194.t1 MTR_4g132110 33.851 322 191 6 24 333 23 334 1.80e-50 171
MS.gene032194.t1 MTR_6g043280 32.727 330 202 6 11 332 15 332 1.91e-50 171
MS.gene032194.t1 MTR_7g072480 33.231 325 196 6 13 332 8 316 2.91e-50 170
MS.gene032194.t1 MTR_4g074990 33.234 334 186 9 7 332 1 305 6.97e-50 169
MS.gene032194.t1 MTR_4g095450 33.443 305 185 6 32 328 26 320 9.59e-50 169
MS.gene032194.t1 MTR_0286s0010 36.364 308 183 7 32 332 33 334 3.75e-49 167
MS.gene032194.t1 MTR_6g008075 36.364 308 183 7 32 332 33 334 3.75e-49 167
MS.gene032194.t1 MTR_3g072190 36.122 263 149 5 76 332 2 251 1.13e-48 164
MS.gene032194.t1 MTR_5g033470 32.154 311 200 4 30 332 70 377 3.30e-48 166
MS.gene032194.t1 MTR_3g105790 39.357 249 142 4 88 332 3 246 4.20e-47 159
MS.gene032194.t1 MTR_1g009750 30.769 338 201 8 1 332 1 311 7.09e-47 161
MS.gene032194.t1 MTR_4g074980 32.628 331 181 9 7 332 1 294 9.84e-47 160
MS.gene032194.t1 MTR_8g062780 31.515 330 212 6 11 332 1 324 1.39e-46 160
MS.gene032194.t1 MTR_2g008160 35.691 311 149 7 30 332 21 288 5.33e-44 152
MS.gene032194.t1 MTR_1g066380 33.846 260 161 4 77 332 3 255 1.49e-42 148
MS.gene032194.t1 MTR_5g074860 33.550 307 142 9 33 329 29 283 8.59e-41 144
MS.gene032194.t1 MTR_4g074980 35.341 249 148 6 7 250 1 241 2.41e-40 142
MS.gene032194.t1 MTR_2g008160 42.197 173 99 1 30 201 21 193 3.87e-36 130
MS.gene032194.t1 MTR_2g029880 35.025 197 109 3 140 332 7 188 2.55e-33 122
MS.gene032194.t1 MTR_2g078560 32.143 224 124 4 135 330 95 318 1.52e-31 120
MS.gene032194.t1 MTR_5g074700 32.051 234 129 8 105 333 7 215 5.50e-30 114
MS.gene032194.t1 MTR_2g077980 30.370 270 154 5 93 328 11 280 2.21e-29 114
MS.gene032194.t1 MTR_3g072210 31.472 197 117 6 141 332 55 238 2.43e-23 97.1
MS.gene032194.t1 MTR_5g058120 33.133 166 95 2 163 328 6 155 6.17e-23 96.3
MS.gene032194.t1 MTR_7g086790 32.653 196 106 6 80 273 17 188 1.89e-22 93.6
MS.gene032194.t1 MTR_3g072260 41.221 131 70 2 9 136 6 132 4.02e-20 85.5
MS.gene032194.t1 MTR_7g072490 29.762 252 106 7 79 325 2 187 7.47e-20 86.7
MS.gene032194.t1 MTR_6g048160 58.462 65 26 1 72 136 22 85 2.24e-18 79.3
MS.gene032194.t1 MTR_3g462850 33.548 155 83 8 188 332 5 149 6.41e-18 79.7
MS.gene032194.t1 MTR_4g114220 46.237 93 41 3 49 139 17 102 1.08e-16 76.3
MS.gene032194.t1 MTR_7g086810 33.913 115 53 1 33 147 6 97 5.29e-12 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene032194.t1 AT5G24070 63.988 336 113 3 4 332 1 335 2.34e-158 446
MS.gene032194.t1 AT2G43480 66.337 303 99 2 32 332 34 335 2.99e-157 444
MS.gene032194.t1 AT5G22410 41.049 324 178 6 11 331 11 324 4.39e-75 234
MS.gene032194.t1 AT5G17820 40.594 303 166 3 32 332 23 313 2.24e-74 232
MS.gene032194.t1 AT3G03670 40.984 305 171 3 32 332 22 321 1.41e-73 230
MS.gene032194.t1 AT5G17820 40.594 303 166 3 32 332 76 366 8.67e-73 229
MS.gene032194.t1 AT5G06730 37.764 331 190 6 9 332 13 334 1.34e-71 226
MS.gene032194.t1 AT5G06720 37.386 329 190 6 11 332 14 333 2.36e-70 222
MS.gene032194.t1 AT5G15180 39.803 304 173 4 33 332 32 329 2.99e-70 222
MS.gene032194.t1 AT2G41480 42.671 307 162 6 33 332 29 328 2.95e-69 219
MS.gene032194.t1 AT1G34510 39.672 305 164 6 32 332 21 309 8.22e-69 218
MS.gene032194.t1 AT5G19880 39.701 335 169 10 12 332 14 329 7.88e-68 216
MS.gene032194.t1 AT5G39580 40.123 324 185 6 11 332 3 319 8.32e-68 215
MS.gene032194.t1 AT5G51890 39.755 327 181 6 11 332 7 322 8.42e-68 215
MS.gene032194.t1 AT4G26010 39.344 305 167 5 32 333 21 310 1.13e-67 214
MS.gene032194.t1 AT5G66390 39.144 327 186 7 12 332 14 333 1.36e-67 215
MS.gene032194.t1 AT4G11290 38.835 309 179 4 30 332 22 326 1.97e-67 214
MS.gene032194.t1 AT1G05260 38.961 308 180 5 30 333 23 326 2.75e-67 214
MS.gene032194.t1 AT4G26010 39.344 305 167 5 32 333 49 338 3.80e-67 214
MS.gene032194.t1 AT5G19890 37.879 330 184 8 11 333 13 328 1.18e-66 213
MS.gene032194.t1 AT5G42180 40.000 300 169 6 33 329 23 314 1.50e-66 212
MS.gene032194.t1 AT5G64120 38.838 327 188 6 11 332 9 328 1.33e-65 210
MS.gene032194.t1 AT3G32980 37.152 323 186 7 20 333 21 335 2.33e-65 210
MS.gene032194.t1 AT4G36430 36.196 326 193 6 13 332 14 330 3.58e-65 209
MS.gene032194.t1 AT1G05240 37.255 306 180 4 33 332 26 325 5.40e-65 208
MS.gene032194.t1 AT1G05250 37.255 306 180 4 33 332 26 325 5.40e-65 208
MS.gene032194.t1 AT4G33870 35.758 330 178 4 33 328 68 397 5.99e-65 211
MS.gene032194.t1 AT3G50990 36.556 331 191 7 9 332 23 341 7.06e-65 209
MS.gene032194.t1 AT3G01190 38.511 309 182 3 26 332 19 321 5.20e-64 206
MS.gene032194.t1 AT2G18140 35.484 341 207 8 1 333 1 336 8.35e-64 206
MS.gene032194.t1 AT2G39040 40.777 309 172 7 32 332 45 350 6.74e-63 204
MS.gene032194.t1 AT3G21770 36.393 305 186 4 28 328 24 324 1.03e-62 202
MS.gene032194.t1 AT5G14130 35.030 334 192 7 10 332 11 330 1.09e-62 202
MS.gene032194.t1 AT1G30870 40.656 305 166 6 33 332 51 345 1.45e-62 202
MS.gene032194.t1 AT2G18150 35.224 335 200 8 11 333 8 337 1.61e-62 202
MS.gene032194.t1 AT3G49110 36.446 332 193 8 11 333 15 337 3.38e-62 202
MS.gene032194.t1 AT5G14130 35.030 334 192 7 10 332 52 371 3.70e-62 202
MS.gene032194.t1 AT3G49120 36.446 332 193 9 11 333 14 336 2.90e-61 199
MS.gene032194.t1 AT2G24800 37.785 307 178 6 32 332 30 329 5.38e-61 198
MS.gene032194.t1 AT1G68850 34.211 342 208 8 1 332 1 335 1.05e-60 197
MS.gene032194.t1 AT4G31760 35.621 306 185 5 32 332 28 326 4.28e-60 196
MS.gene032194.t1 AT5G05340 34.839 310 183 5 30 332 27 324 2.05e-59 194
MS.gene032194.t1 AT1G14550 36.334 311 178 6 30 332 23 321 6.40e-59 192
MS.gene032194.t1 AT2G38380 35.061 328 194 7 16 332 14 333 7.93e-59 193
MS.gene032194.t1 AT5G58400 36.615 325 189 6 14 332 12 325 1.09e-58 192
MS.gene032194.t1 AT5G64110 37.377 305 182 3 31 332 32 330 1.70e-58 192
MS.gene032194.t1 AT2G22420 35.621 306 184 5 33 333 23 320 2.12e-58 191
MS.gene032194.t1 AT4G08770 39.716 282 156 7 60 332 51 327 2.33e-58 192
MS.gene032194.t1 AT2G18980 35.077 325 198 6 14 332 6 323 4.37e-58 190
MS.gene032194.t1 AT1G49570 37.582 306 180 6 32 330 47 348 4.42e-58 191
MS.gene032194.t1 AT2G38390 35.077 325 198 6 16 332 14 333 1.59e-57 190
MS.gene032194.t1 AT4G37530 36.066 305 182 5 32 328 26 325 2.26e-57 189
MS.gene032194.t1 AT5G64100 38.462 299 171 5 38 332 42 331 3.05e-57 188
MS.gene032194.t1 AT4G25980 35.329 334 195 4 5 332 8 326 3.75e-57 188
MS.gene032194.t1 AT1G14540 35.583 326 188 8 13 332 6 315 1.17e-56 186
MS.gene032194.t1 AT4G21960 35.015 337 198 6 4 333 6 328 1.36e-56 187
MS.gene032194.t1 AT1G44970 34.604 341 206 6 4 332 11 346 2.14e-56 187
MS.gene032194.t1 AT1G71695 34.286 315 184 9 28 332 38 339 2.32e-56 187
MS.gene032194.t1 AT4G08780 36.774 310 182 7 32 332 23 327 2.52e-56 186
MS.gene032194.t1 AT5G58390 35.238 315 184 5 26 332 14 316 3.39e-56 185
MS.gene032194.t1 AT2G35380 36.202 337 195 9 7 332 8 335 6.75e-56 185
MS.gene032194.t1 AT4G30170 35.179 307 186 6 32 332 26 325 5.07e-55 182
MS.gene032194.t1 AT4G33420 36.964 303 174 4 33 332 37 325 5.07e-55 182
MS.gene032194.t1 AT4G37520 35.738 305 183 5 32 328 26 325 8.94e-55 182
MS.gene032194.t1 AT4G33420 36.964 303 174 4 33 332 84 372 1.53e-54 182
MS.gene032194.t1 AT2G34060 36.422 313 184 7 28 329 35 343 7.69e-54 180
MS.gene032194.t1 AT4G16270 38.562 306 175 7 33 332 50 348 3.10e-53 179
MS.gene032194.t1 AT4G37520 35.738 305 180 6 32 328 26 322 1.50e-52 176
MS.gene032194.t1 AT1G77100 35.119 336 194 8 4 332 1 319 1.54e-52 176
MS.gene032194.t1 AT3G17070 33.775 302 190 4 33 328 38 335 2.36e-52 176
MS.gene032194.t1 AT4G17690 35.350 314 186 7 27 333 20 323 6.19e-52 174
MS.gene032194.t1 AT5G67400 33.538 325 203 5 12 328 6 325 2.73e-51 173
MS.gene032194.t1 AT3G49960 33.770 305 189 5 32 328 26 325 1.27e-50 171
MS.gene032194.t1 AT2G37130 32.353 306 195 5 32 332 29 327 1.62e-48 166
MS.gene032194.t1 AT5G47000 33.435 329 203 7 10 332 12 330 1.25e-47 164
MS.gene032194.t1 AT2G37130 32.450 302 192 5 36 332 2 296 1.31e-47 162
MS.gene032194.t1 AT4G37530 37.165 261 150 6 32 284 26 280 2.03e-47 161
MS.gene032194.t1 AT1G24110 34.146 328 190 10 20 332 6 322 4.85e-45 156
MS.gene032194.t1 AT3G17070 34.231 260 160 5 75 328 18 272 6.40e-43 149
MS.gene032194.t1 AT2G35380 36.546 249 144 6 93 332 4 247 4.45e-41 144
MS.gene032194.t1 AT5G40150 31.511 311 198 5 28 332 27 328 2.57e-40 144
MS.gene032194.t1 AT3G28200 30.097 309 200 5 30 332 18 316 1.76e-39 142
MS.gene032194.t1 AT2G24800 43.902 164 89 2 32 193 30 192 5.57e-39 138
MS.gene032194.t1 AT5G39580 40.404 198 112 3 38 230 30 226 8.80e-37 132
MS.gene032194.t1 AT4G25980 34.934 229 139 3 13 235 55 279 2.27e-35 130
MS.gene032194.t1 AT3G42570 34.653 101 63 2 98 195 49 149 1.47e-11 62.0

Find 76 sgRNAs with CRISPR-Local

Find 142 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTTGTCCTTTCTTTGTTCT+TGG 0.121919 2.3:+4341674 None:intergenic
TGCTCAATCCATGTTCAAAA+TGG 0.176494 2.3:-4341468 MS.gene032194:CDS
ATCGATCAACAATTACTATT+TGG 0.229792 2.3:-4341554 MS.gene032194:CDS
TTTGTCCTTTCTTTGTTCTT+GGG 0.255932 2.3:+4341675 None:intergenic
TCAGAGAATCATACTATAAA+AGG 0.256963 2.3:-4341604 MS.gene032194:CDS
TCCTTTCTTCCTGTGAAAAC+TGG 0.305455 2.3:+4342023 None:intergenic
AGCTAGGGATGCTGCTAAAA+TGG 0.328938 2.3:-4342184 MS.gene032194:intron
TGCCATTGCAACTTTGGCTT+TGG 0.331079 2.3:+4342892 None:intergenic
TTAGATATGACAACACTCTT+AGG 0.336759 2.3:-4341903 MS.gene032194:intron
TGACAAGATCAAAACTGTTC+TGG 0.348274 2.3:-4342256 MS.gene032194:CDS
AAATTCCTCGGTGATCTCTT+TGG 0.357017 2.3:+4341523 None:intergenic
TCAGCGCAGGAGACAATTCC+AGG 0.375749 2.3:+4342222 None:intergenic
GCTCAATCCATGTTCAAAAT+GGG 0.411312 2.3:-4341467 MS.gene032194:CDS
CCTGCGCAATGAAGCTGTCC+TGG 0.413855 2.3:-4341579 MS.gene032194:CDS
CTCTAGCATACTTTAAATCA+AGG 0.418727 2.3:-4341938 MS.gene032194:CDS
TTGTCCTTTCTTTGTTCTTG+GGG 0.428214 2.3:+4341676 None:intergenic
CTGTATAATTACAATGGTAC+TGG 0.433726 2.3:-4341755 MS.gene032194:CDS
CGAAAAGTAGCATCCATGCT+TGG 0.456509 2.3:+4341722 None:intergenic
GAAAAGTAGCATCCATGCTT+GGG 0.480736 2.3:+4341723 None:intergenic
TACTGCCAAGTTACTACGCT+TGG 0.481182 2.3:-4342788 MS.gene032194:CDS
TAGTGATGCCATTGCAACTT+TGG 0.483722 2.3:+4342886 None:intergenic
GTAATTGTTGATCGATTCCC+AGG 0.485944 2.3:+4341561 None:intergenic
ACTGCAAAAGCTATTATTAG+TGG 0.486300 2.3:+4342949 None:intergenic
GGCACCAAGTGAAGATTCAC+TGG 0.487472 2.3:-4342828 MS.gene032194:CDS
ATCACCGAGGAATTTGCTGC+TGG 0.488175 2.3:-4341515 MS.gene032194:CDS
TGTCAACAGGCAGGTGCACC+AGG 0.491420 2.3:-4342050 MS.gene032194:intron
CAATGTGGCTACAATGTGTT+TGG 0.492341 2.3:+4341786 None:intergenic
GATCCCAGTGAATCTTCACT+TGG 0.511521 2.3:+4342824 None:intergenic
GTAAACCAAGCGTAGTAACT+TGG 0.512999 2.3:+4342783 None:intergenic
CCAGGACAGCTTCATTGCGC+AGG 0.514985 2.3:+4341579 None:intergenic
ATCACCATCCATCTCATGGC+AGG 0.525540 2.3:-4341964 MS.gene032194:CDS
GTTCTGGAATCACGATGCCC+TGG 0.534270 2.3:-4342240 MS.gene032194:CDS
CTCCAAAGCCAAAGTTGCAA+TGG 0.535232 2.3:-4342894 MS.gene032194:CDS
GTATACCTAAACCCAGACTC+TGG 0.544857 2.3:-4341641 MS.gene032194:CDS
TGTCCTTTCTTTGTTCTTGG+GGG 0.550196 2.3:+4341677 None:intergenic
ATATACTCCATCTCGCAGCT+AGG 0.550645 2.3:-4342200 MS.gene032194:CDS
CAGCATCCCTAGCTGCGAGA+TGG 0.550746 2.3:+4342193 None:intergenic
CTGCGCAATGAAGCTGTCCT+GGG 0.555200 2.3:-4341578 MS.gene032194:CDS
ATTGTAGCCACATTGTTGAC+AGG 0.555596 2.3:-4341778 MS.gene032194:CDS
CTGCAAAAGCTATTATTAGT+GGG 0.556067 2.3:+4342950 None:intergenic
GTACAAATCCTCCAAGCCCC+CGG 0.559364 2.3:+4342283 None:intergenic
AATGGGTAGACTTATGTATG+TGG 0.565516 2.3:-4342977 MS.gene032194:CDS
GCAGTGTTGAGCTTGTGCCA+TGG 0.566470 2.3:-4342931 MS.gene032194:CDS
AGTGAATCTTCACTTGGTGC+CGG 0.566856 2.3:+4342830 None:intergenic
CCTGTGAAAACTGGATAACC+TGG 0.572521 2.3:+4342032 None:intergenic
TGCCATCACCATCCATCTCA+TGG 0.573493 2.3:-4341968 MS.gene032194:CDS
TCTAGCATACTTTAAATCAA+GGG 0.578417 2.3:-4341937 MS.gene032194:CDS
TATACTCCATCTCGCAGCTA+GGG 0.579210 2.3:-4342199 MS.gene032194:CDS
GAAATCAAGGAGAGGTACGC+CGG 0.584932 2.3:-4341424 MS.gene032194:CDS
ATACTTTAAATCAAGGGGAC+TGG 0.589178 2.3:-4341931 MS.gene032194:CDS
GAAAGGACAAAGTGACCCAC+TGG 0.589445 2.3:-4341663 MS.gene032194:CDS
GCGACGCAGAGGTGTATGTC+CGG 0.597008 2.3:-4342849 MS.gene032194:CDS
GCATCAATACTGCTTGATGA+AGG 0.603718 2.3:-4342336 MS.gene032194:CDS
ATGAGATGGATGGTGATGGC+AGG 0.611656 2.3:+4341970 None:intergenic
CTAGCATACTTTAAATCAAG+GGG 0.615884 2.3:-4341936 MS.gene032194:CDS
AAATCCAGCAGCAAATTCCT+CGG 0.621559 2.3:+4341511 None:intergenic
AACACAGGAGCACACACACT+AGG 0.622191 2.3:-4341809 MS.gene032194:intron
TGGAAACTCAGACCCAAGCA+TGG 0.631385 2.3:-4341735 MS.gene032194:CDS
CAATGTATGCCGCGACGCAG+AGG 0.638012 2.3:-4342860 MS.gene032194:CDS
GAGATGGAGTATATCAGCGC+AGG 0.640347 2.3:+4342209 None:intergenic
TGCCATGAGATGGATGGTGA+TGG 0.640627 2.3:+4341966 None:intergenic
TAGAGATTCCTGCCATGAGA+TGG 0.641062 2.3:+4341956 None:intergenic
GACAGGCTGTATAATTACAA+TGG 0.641447 2.3:-4341761 MS.gene032194:CDS
ACATACATTGACAAAACAGT+CGG 0.657112 2.3:+4342759 None:intergenic
AAAAGAGCACCACAAAACCG+GGG 0.661005 2.3:-4342300 MS.gene032194:CDS
TTTAACAGGAAATCAAGGAG+AGG 0.672719 2.3:-4341432 MS.gene032194:CDS
CAGCGCAGGAGACAATTCCA+GGG 0.677474 2.3:+4342223 None:intergenic
GCACCAAGTGAAGATTCACT+GGG 0.684010 2.3:-4342827 MS.gene032194:CDS
GATTCCTGCCATGAGATGGA+TGG 0.684323 2.3:+4341960 None:intergenic
TATTTGTGTATCGACAACTC+CGG 0.685062 2.3:+4341405 None:intergenic
TCTGGGTTTAGGTATACCAG+TGG 0.695699 2.3:+4341647 None:intergenic
CTGGGTTTAGGTATACCAGT+GGG 0.698864 2.3:+4341648 None:intergenic
TATACAGCCTGTCAACAATG+TGG 0.699068 2.3:+4341771 None:intergenic
GGACATACACCTCTGCGTCG+CGG 0.704072 2.3:+4342851 None:intergenic
AAAGAGCACCACAAAACCGG+GGG 0.709202 2.3:-4342299 MS.gene032194:CDS
TGACACCAAAGAGATCACCG+AGG 0.853016 2.3:-4341528 MS.gene032194:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ACCAAATTATAAAAGAAAAA+AGG + chr2.3:4341651-4341670 None:intergenic 15.0%
!! TATAAAAGAAAAAAGGAAAT+GGG + chr2.3:4341644-4341663 None:intergenic 15.0%
!! TTATAAAAGAAAAAAGGAAA+TGG + chr2.3:4341645-4341664 None:intergenic 15.0%
!! TTCATTTATAATGTTTAGAA+TGG + chr2.3:4341959-4341978 None:intergenic 15.0%
!!! TCCTTTTTTCTTTTATAATT+TGG - chr2.3:4341647-4341666 MS.gene032194:CDS 15.0%
!! ATAAAAGAAAAAAGGAAATG+GGG + chr2.3:4341643-4341662 None:intergenic 20.0%
!! TAGCTTAAAAAGTTGAAAAA+TGG + chr2.3:4341696-4341715 None:intergenic 20.0%
!!! ACTAACAATATGTTCTAAAT+GGG - chr2.3:4342529-4342548 MS.gene032194:intron 20.0%
!!! TACTAACAATATGTTCTAAA+TGG - chr2.3:4342528-4342547 MS.gene032194:intron 20.0%
!!! TTTAGAATGGTAAGTTTAAA+TGG + chr2.3:4341946-4341965 None:intergenic 20.0%
! AATTTAGATAGAACAACAAG+AGG + chr2.3:4341868-4341887 None:intergenic 25.0%
! ACTCTAAATACCAAGTTAAA+TGG + chr2.3:4341899-4341918 None:intergenic 25.0%
! ATCGATCAACAATTACTATT+TGG - chr2.3:4342822-4342841 MS.gene032194:CDS 25.0%
! ATTTAGATAGAACAACAAGA+GGG + chr2.3:4341867-4341886 None:intergenic 25.0%
! ATTTGAGAATTAATGTCAAC+AGG - chr2.3:4342313-4342332 MS.gene032194:CDS 25.0%
! GTTGACATTAATTCTCAAAT+CGG + chr2.3:4342313-4342332 None:intergenic 25.0%
! TCAGAGAATCATACTATAAA+AGG - chr2.3:4342772-4342791 MS.gene032194:CDS 25.0%
! TCTAGCATACTTTAAATCAA+GGG - chr2.3:4342439-4342458 MS.gene032194:intron 25.0%
!!! AAAGTTTTAACAGGAAATCA+AGG - chr2.3:4342939-4342958 MS.gene032194:CDS 25.0%
!!! GGAAATATCAAAGTTTTAAC+AGG - chr2.3:4342930-4342949 MS.gene032194:CDS 25.0%
!!! TGCATATATTTTAGCTTCAA+GGG + chr2.3:4341811-4341830 None:intergenic 25.0%
!!! TTGCATATATTTTAGCTTCA+AGG + chr2.3:4341812-4341831 None:intergenic 25.0%
AAAAATCTTCTCTCAAGGTA+GGG - chr2.3:4342265-4342284 MS.gene032194:CDS 30.0%
ACATACATTGACAAAACAGT+CGG + chr2.3:4341620-4341639 None:intergenic 30.0%
ACTGCAAAAGCTATTATTAG+TGG + chr2.3:4341430-4341449 None:intergenic 30.0%
CTAGCATACTTTAAATCAAG+GGG - chr2.3:4342440-4342459 MS.gene032194:intron 30.0%
CTCTAGCATACTTTAAATCA+AGG - chr2.3:4342438-4342457 MS.gene032194:intron 30.0%
CTGCAAAAGCTATTATTAGT+GGG + chr2.3:4341429-4341448 None:intergenic 30.0%
CTGTATAATTACAATGGTAC+TGG - chr2.3:4342621-4342640 MS.gene032194:intron 30.0%
TTAGATATGACAACACTCTT+AGG - chr2.3:4342473-4342492 MS.gene032194:intron 30.0%
TTCAGTTGTTCCATTTAACT+TGG - chr2.3:4341886-4341905 MS.gene032194:intron 30.0%
TTTGTCCTTTCTTTGTTCTT+GGG + chr2.3:4342704-4342723 None:intergenic 30.0%
! GATATTTCCCATTTTGAACA+TGG + chr2.3:4342919-4342938 None:intergenic 30.0%
AAAATCTTCTCTCAAGGTAG+GGG - chr2.3:4342266-4342285 MS.gene032194:CDS 35.0%
AACTTCTAGGTAATAGGACT+AGG - chr2.3:4341752-4341771 MS.gene032194:CDS 35.0%
ATACTTTAAATCAAGGGGAC+TGG - chr2.3:4342445-4342464 MS.gene032194:intron 35.0%
CTTTGTCCTTTCTTTGTTCT+TGG + chr2.3:4342705-4342724 None:intergenic 35.0%
GAAAAATCTTCTCTCAAGGT+AGG - chr2.3:4342264-4342283 MS.gene032194:CDS 35.0%
GAAAGGAACTTCTAGGTAAT+AGG - chr2.3:4341746-4341765 MS.gene032194:CDS 35.0%
GACAGGCTGTATAATTACAA+TGG - chr2.3:4342615-4342634 MS.gene032194:intron 35.0%
GCTCAATCCATGTTCAAAAT+GGG - chr2.3:4342909-4342928 MS.gene032194:CDS 35.0%
TATGACAACACTCTTAGGTA+AGG - chr2.3:4342478-4342497 MS.gene032194:intron 35.0%
TGACAAGATCAAAACTGTTC+TGG - chr2.3:4342120-4342139 MS.gene032194:intron 35.0%
TGCATGTTTCATATCAACAC+AGG - chr2.3:4342552-4342571 MS.gene032194:intron 35.0%
TGCTCAATCCATGTTCAAAA+TGG - chr2.3:4342908-4342927 MS.gene032194:CDS 35.0%
TTGTCCTTTCTTTGTTCTTG+GGG + chr2.3:4342703-4342722 None:intergenic 35.0%
TTTAACAGGAAATCAAGGAG+AGG - chr2.3:4342944-4342963 MS.gene032194:CDS 35.0%
! AAACTTAAATCGCTGTTTCG+TGG - chr2.3:4342003-4342022 MS.gene032194:CDS 35.0%
! ATGTAATCTTTTCCAGAGTC+TGG + chr2.3:4342750-4342769 None:intergenic 35.0%
! CTGCTGGATTTGAAGATTTT+AGG - chr2.3:4342877-4342896 MS.gene032194:CDS 35.0%
! CTTGAGAGAAGATTTTTCTG+CGG + chr2.3:4342262-4342281 None:intergenic 35.0%
! CTTGGTATTTAGAGTTCATG+AGG - chr2.3:4341904-4341923 MS.gene032194:CDS 35.0%
! GAAACAGCGATTTAAGTTTC+AGG + chr2.3:4342002-4342021 None:intergenic 35.0%
! GTTCATGAGGTTTAAAGCAT+AGG - chr2.3:4341917-4341936 MS.gene032194:CDS 35.0%
! TATTTGTGTATCGACAACTC+CGG + chr2.3:4342974-4342993 None:intergenic 35.0%
! TGTAATCTTTTCCAGAGTCT+GGG + chr2.3:4342749-4342768 None:intergenic 35.0%
! TTTTGTGGTGCTCTTTTTTC+TGG + chr2.3:4342073-4342092 None:intergenic 35.0%
!! AAAAAAGAGCACCACAAAAC+CGG - chr2.3:4342074-4342093 MS.gene032194:intron 35.0%
!! TGTTTTTGTAACCTGTCCTT+TGG + chr2.3:4341783-4341802 None:intergenic 35.0%
AAATCCAGCAGCAAATTCCT+CGG + chr2.3:4342868-4342887 None:intergenic 40.0%
AAATTCCTCGGTGATCTCTT+TGG + chr2.3:4342856-4342875 None:intergenic 40.0%
ATAGGACTAGGAACAACCAA+AGG - chr2.3:4341764-4341783 MS.gene032194:CDS 40.0%
ATTGGCTGAAAGGAACTTCT+AGG - chr2.3:4341739-4341758 MS.gene032194:CDS 40.0%
ATTGTAGCCACATTGTTGAC+AGG - chr2.3:4342598-4342617 MS.gene032194:intron 40.0%
CAATGTGGCTACAATGTGTT+TGG + chr2.3:4342593-4342612 None:intergenic 40.0%
CGCAGAAAAATCTTCTCTCA+AGG - chr2.3:4342260-4342279 MS.gene032194:CDS 40.0%
GAAAAGTAGCATCCATGCTT+GGG + chr2.3:4342656-4342675 None:intergenic 40.0%
GAGAATTAATGTCAACAGGC+AGG - chr2.3:4342317-4342336 MS.gene032194:CDS 40.0%
GCATCAATACTGCTTGATGA+AGG - chr2.3:4342040-4342059 MS.gene032194:CDS 40.0%
GTAAACCAAGCGTAGTAACT+TGG + chr2.3:4341596-4341615 None:intergenic 40.0%
TAAGAAAGAGACATCGTGTG+AGG - chr2.3:4341714-4341733 MS.gene032194:CDS 40.0%
TAGTGATGCCATTGCAACTT+TGG + chr2.3:4341493-4341512 None:intergenic 40.0%
TATACAGCCTGTCAACAATG+TGG + chr2.3:4342608-4342627 None:intergenic 40.0%
TCCTTTCTTCCTGTGAAAAC+TGG + chr2.3:4342356-4342375 None:intergenic 40.0%
TGTCCTTTCTTTGTTCTTGG+GGG + chr2.3:4342702-4342721 None:intergenic 40.0%
! AGAGAAGATTTTTCTGCGGA+GGG + chr2.3:4342258-4342277 None:intergenic 40.0%
! GTAATTGTTGATCGATTCCC+AGG + chr2.3:4342818-4342837 None:intergenic 40.0%
! GTTTTCACAGGAAGAAAGGA+TGG - chr2.3:4342356-4342375 MS.gene032194:intron 40.0%
! TCCAGTTTTCACAGGAAGAA+AGG - chr2.3:4342352-4342371 MS.gene032194:intron 40.0%
!! AAAAAGAGCACCACAAAACC+GGG - chr2.3:4342075-4342094 MS.gene032194:intron 40.0%
!! TACTTTTCGAGACACGTTGA+GGG - chr2.3:4342668-4342687 MS.gene032194:intron 40.0%
!!! GGTGCTCTTTTTTCTGGATT+TGG + chr2.3:4342067-4342086 None:intergenic 40.0%
ACTAGGAACAACCAAAGGAC+AGG - chr2.3:4341769-4341788 MS.gene032194:CDS 45.0%
AGCTAGGGATGCTGCTAAAA+TGG - chr2.3:4342192-4342211 MS.gene032194:CDS 45.0%
ATATACTCCATCTCGCAGCT+AGG - chr2.3:4342176-4342195 MS.gene032194:intron 45.0%
CCTGTGAAAACTGGATAACC+TGG + chr2.3:4342347-4342366 None:intergenic 45.0%
CGAAAAGTAGCATCCATGCT+TGG + chr2.3:4342657-4342676 None:intergenic 45.0%
CTCCAAAGCCAAAGTTGCAA+TGG - chr2.3:4341482-4341501 MS.gene032194:CDS 45.0%
CTGGGTTTAGGTATACCAGT+GGG + chr2.3:4342731-4342750 None:intergenic 45.0%
GAGACATCGTGTGAGGTTAT+TGG - chr2.3:4341721-4341740 MS.gene032194:CDS 45.0%
GATCCCAGTGAATCTTCACT+TGG + chr2.3:4341555-4341574 None:intergenic 45.0%
GCACCAAGTGAAGATTCACT+GGG - chr2.3:4341549-4341568 MS.gene032194:CDS 45.0%
GTATACCTAAACCCAGACTC+TGG - chr2.3:4342735-4342754 MS.gene032194:intron 45.0%
TACTGCCAAGTTACTACGCT+TGG - chr2.3:4341588-4341607 MS.gene032194:CDS 45.0%
TAGAGATTCCTGCCATGAGA+TGG + chr2.3:4342423-4342442 None:intergenic 45.0%
TATACTCCATCTCGCAGCTA+GGG - chr2.3:4342177-4342196 MS.gene032194:intron 45.0%
TCTGGGTTTAGGTATACCAG+TGG + chr2.3:4342732-4342751 None:intergenic 45.0%
TGTCCCCCAAGAACAAAGAA+AGG - chr2.3:4342696-4342715 MS.gene032194:intron 45.0%
! AAATCGCTGTTTCGTGGCAT+AGG - chr2.3:4342009-4342028 MS.gene032194:CDS 45.0%
! AATCGCTGTTTCGTGGCATA+GGG - chr2.3:4342010-4342029 MS.gene032194:CDS 45.0%
! CCAGGTTATCCAGTTTTCAC+AGG - chr2.3:4342344-4342363 MS.gene032194:CDS 45.0%
! CTTTTCCAGAGTCTGGGTTT+AGG + chr2.3:4342743-4342762 None:intergenic 45.0%
! GAGAAGATTTTTCTGCGGAG+GGG + chr2.3:4342257-4342276 None:intergenic 45.0%
! GAGAGAAGATTTTTCTGCGG+AGG + chr2.3:4342259-4342278 None:intergenic 45.0%
! GTGTGAGGTTATTGGCTGAA+AGG - chr2.3:4341729-4341748 MS.gene032194:CDS 45.0%
! TGCCATTGCAACTTTGGCTT+TGG + chr2.3:4341487-4341506 None:intergenic 45.0%
!! AAAAGAGCACCACAAAACCG+GGG - chr2.3:4342076-4342095 MS.gene032194:intron 45.0%
!! ACTTTTCGAGACACGTTGAG+GGG - chr2.3:4342669-4342688 MS.gene032194:intron 45.0%
!! AGTGAATCTTCACTTGGTGC+CGG + chr2.3:4341549-4341568 None:intergenic 45.0%
!! CTACTTTTCGAGACACGTTG+AGG - chr2.3:4342667-4342686 MS.gene032194:intron 45.0%
ATCACCATCCATCTCATGGC+AGG - chr2.3:4342412-4342431 MS.gene032194:intron 50.0%
GAAAGGACAAAGTGACCCAC+TGG - chr2.3:4342713-4342732 MS.gene032194:intron 50.0%
GAGATGGAGTATATCAGCGC+AGG + chr2.3:4342170-4342189 None:intergenic 50.0%
GATTCCTGCCATGAGATGGA+TGG + chr2.3:4342419-4342438 None:intergenic 50.0%
GGCACCAAGTGAAGATTCAC+TGG - chr2.3:4341548-4341567 MS.gene032194:CDS 50.0%
TGACACCAAAGAGATCACCG+AGG - chr2.3:4342848-4342867 MS.gene032194:CDS 50.0%
TGCCATCACCATCCATCTCA+TGG - chr2.3:4342408-4342427 MS.gene032194:intron 50.0%
TGCCATGAGATGGATGGTGA+TGG + chr2.3:4342413-4342432 None:intergenic 50.0%
TGGAAACTCAGACCCAAGCA+TGG - chr2.3:4342641-4342660 MS.gene032194:intron 50.0%
! AACACAGGAGCACACACACT+AGG - chr2.3:4342567-4342586 MS.gene032194:intron 50.0%
! GAAATCAAGGAGAGGTACGC+CGG - chr2.3:4342952-4342971 MS.gene032194:CDS 50.0%
!! AAAGAGCACCACAAAACCGG+GGG - chr2.3:4342077-4342096 MS.gene032194:intron 50.0%
!! ATCACCGAGGAATTTGCTGC+TGG - chr2.3:4342861-4342880 MS.gene032194:CDS 50.0%
!! ATGAGATGGATGGTGATGGC+AGG + chr2.3:4342409-4342428 None:intergenic 50.0%
CAGCGCAGGAGACAATTCCA+GGG + chr2.3:4342156-4342175 None:intergenic 55.0%
CTGCGCAATGAAGCTGTCCT+GGG - chr2.3:4342798-4342817 MS.gene032194:CDS 55.0%
GTACAAATCCTCCAAGCCCC+CGG + chr2.3:4342096-4342115 None:intergenic 55.0%
TCAGCGCAGGAGACAATTCC+AGG + chr2.3:4342157-4342176 None:intergenic 55.0%
TTCTGCGGAGGGGATAGTGA+AGG + chr2.3:4342247-4342266 None:intergenic 55.0%
! GCAGTGTTGAGCTTGTGCCA+TGG - chr2.3:4341445-4341464 MS.gene032194:CDS 55.0%
!! GTTCTGGAATCACGATGCCC+TGG - chr2.3:4342136-4342155 MS.gene032194:intron 55.0%
CAATGTATGCCGCGACGCAG+AGG - chr2.3:4341516-4341535 MS.gene032194:CDS 60.0%
CAGCATCCCTAGCTGCGAGA+TGG + chr2.3:4342186-4342205 None:intergenic 60.0%
CCAGGACAGCTTCATTGCGC+AGG + chr2.3:4342800-4342819 None:intergenic 60.0%
CCTGCGCAATGAAGCTGTCC+TGG - chr2.3:4342797-4342816 MS.gene032194:CDS 60.0%
GGACATACACCTCTGCGTCG+CGG + chr2.3:4341528-4341547 None:intergenic 60.0%
TGTCAACAGGCAGGTGCACC+AGG - chr2.3:4342326-4342345 MS.gene032194:CDS 60.0%
! GCGACGCAGAGGTGTATGTC+CGG - chr2.3:4341527-4341546 MS.gene032194:CDS 60.0%
CCACAAAACCGGGGGCTTGG+AGG - chr2.3:4342085-4342104 MS.gene032194:intron 65.0%
GAGCTGCTGCTGCTGCTCCA+TGG + chr2.3:4341465-4341484 None:intergenic 65.0%
GCACCACAAAACCGGGGGCT+TGG - chr2.3:4342082-4342101 MS.gene032194:intron 65.0%
! CCTCCAAGCCCCCGGTTTTG+TGG + chr2.3:4342088-4342107 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr2.3 gene 4341400 4342998 4341400 ID=MS.gene032194
chr2.3 mRNA 4341400 4342998 4341400 ID=MS.gene032194.t1;Parent=MS.gene032194
chr2.3 exon 4342765 4342998 4342765 ID=MS.gene032194.t1.exon1;Parent=MS.gene032194.t1
chr2.3 CDS 4342765 4342998 4342765 ID=cds.MS.gene032194.t1;Parent=MS.gene032194.t1
chr2.3 exon 4342185 4342367 4342185 ID=MS.gene032194.t1.exon2;Parent=MS.gene032194.t1
chr2.3 CDS 4342185 4342367 4342185 ID=cds.MS.gene032194.t1;Parent=MS.gene032194.t1
chr2.3 exon 4341904 4342063 4341904 ID=MS.gene032194.t1.exon3;Parent=MS.gene032194.t1
chr2.3 CDS 4341904 4342063 4341904 ID=cds.MS.gene032194.t1;Parent=MS.gene032194.t1
chr2.3 exon 4341400 4341824 4341400 ID=MS.gene032194.t1.exon4;Parent=MS.gene032194.t1
chr2.3 CDS 4341400 4341824 4341400 ID=cds.MS.gene032194.t1;Parent=MS.gene032194.t1
Gene Sequence

>MS.gene032194

ATGGGTAGACTTATGTATGTGGCTTTCCCACTAATAATAGCTTTTGCAGTGTTGAGCTTGTGCCATGGAGCAGCAGCAGCAGCTCCAAAGCCAAAGTTGCAATGGCATCACTATCACAATGTATGCCGCGACGCAGAGGTGTATGTCCGGCACCAAGTGAAGATTCACTGGGATCAAGACAAAAGTATTACTGCCAAGTTACTACGCTTGGTTTACACCGACTGTTTTGTCAATGTATGTCCCCATTTCCTTTTTTCTTTTATAATTTGGTACTAGCTAGTCTTTTCTTTTCTCCATTTTTCAACTTTTTAAGCTAAGAAAGAGACATCGTGTGAGGTTATTGGCTGAAAGGAACTTCTAGGTAATAGGACTAGGAACAACCAAAGGACAGGTTACAAAAACAGCAGACCCTTGAAGCTAAAATATATGCAAGTTGCACTAAAAATATATAGTCGAAACTTGAACCCTCTTGTTGTTCTATCTAAATTCAGTTGTTCCATTTAACTTGGTATTTAGAGTTCATGAGGTTTAAAGCATAGGATTCCATTTAAACTTACCATTCTAAACATTATAAATGAATAAGTTTTGTTTTTTTTTCTCCTGAAACTTAAATCGCTGTTTCGTGGCATAGGGTTGTGATGCATCAATACTGCTTGATGAAGGACCAAATCCAGAAAAAAGAGCACCACAAAACCGGGGGCTTGGAGGATTTGTACTAATTGACAAGATCAAAACTGTTCTGGAATCACGATGCCCTGGAATTGTCTCCTGCGCTGATATACTCCATCTCGCAGCTAGGGATGCTGCTAAAATGGTATTCTTTCAACTAGTCTACTTACAATTTCCTTCACTATCCCCTCCGCAGAAAAATCTTCTCTCAAGGTAGGGGTAAAAGTTGAAAAAACAGTAACCGATTTGAGAATTAATGTCAACAGGCAGGTGCACCAGGTTATCCAGTTTTCACAGGAAGAAAGGATGGCATGAAATCAGATGCTGCATCAGTAGACCTGCCATCACCATCCATCTCATGGCAGGAATCTCTAGCATACTTTAAATCAAGGGGACTGGACGTATTAGATATGACAACACTCTTAGGTAAGGCAAGATTACAATCAAGTAGAAATTACATACTAACAATATGTTCTAAATGGGTGCATGTTTCATATCAACACAGGAGCACACACACTAGGCCAAACACATTGTAGCCACATTGTTGACAGGCTGTATAATTACAATGGTACTGGAAACTCAGACCCAAGCATGGATGCTACTTTTCGAGACACGTTGAGGGGACTTTGTCCCCCAAGAACAAAGAAAGGACAAAGTGACCCACTGGTATACCTAAACCCAGACTCTGGAAAAGATTACATCTTCAGAGAATCATACTATAAAAGGATCCTGCGCAATGAAGCTGTCCTGGGAATCGATCAACAATTACTATTTGGTGATGACACCAAAGAGATCACCGAGGAATTTGCTGCTGGATTTGAAGATTTTAGGAGATCTTTTGCTCAATCCATGTTCAAAATGGGAAATATCAAAGTTTTAACAGGAAATCAAGGAGAGGTACGCCGGAGTTGTCGATACACAAATAAGTGA
Protein sequence

>MS.gene032194.t1

MGRLMYVAFPLIIAFAVLSLCHGAAAAAPKPKLQWHHYHNVCRDAEVYVRHQVKIHWDQDKSITAKLLRLVYTDCFVNGCDASILLDEGPNPEKRAPQNRGLGGFVLIDKIKTVLESRCPGIVSCADILHLAARDAAKMAGAPGYPVFTGRKDGMKSDAASVDLPSPSISWQESLAYFKSRGLDVLDMTTLLGAHTLGQTHCSHIVDRLYNYNGTGNSDPSMDATFRDTLRGLCPPRTKKGQSDPLVYLNPDSGKDYIFRESYYKRILRNEAVLGIDQQLLFGDDTKEITEEFAAGFEDFRRSFAQSMFKMGNIKVLTGNQGEVRRSCRYTNK