AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene034512

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene034512.t1 MTR_1g054205 97.256 328 9 0 1 328 1 328 0.0 645
MS.gene034512.t1 MTR_7g093370 80.062 321 62 1 10 328 53 373 0.0 520
MS.gene034512.t1 MTR_2g029815 60.256 312 123 1 15 326 20 330 3.09e-134 385
MS.gene034512.t1 MTR_2g029820 59.486 311 125 1 16 326 21 330 1.99e-132 381
MS.gene034512.t1 MTR_2g029830 59.547 309 124 1 18 326 22 329 1.73e-128 371
MS.gene034512.t1 MTR_2g029860 58.716 327 133 2 2 327 6 331 1.00e-126 367
MS.gene034512.t1 MTR_2g029800 56.913 311 133 1 16 326 21 330 1.79e-126 366
MS.gene034512.t1 MTR_4g125940 56.832 322 130 3 11 326 11 329 6.88e-126 363
MS.gene034512.t1 MTR_2g028980 57.994 319 131 2 8 326 15 330 1.15e-125 364
MS.gene034512.t1 MTR_2g040000 56.740 319 132 2 11 326 16 331 2.50e-124 360
MS.gene034512.t1 MTR_2g029850 59.295 312 126 1 16 327 21 331 2.56e-123 358
MS.gene034512.t1 MTR_2g029750 56.270 311 135 1 16 326 21 330 1.95e-121 353
MS.gene034512.t1 MTR_2g029560 52.905 327 153 1 1 327 1 326 3.23e-121 352
MS.gene034512.t1 MTR_2g029740 55.627 311 137 1 16 326 21 330 2.67e-120 350
MS.gene034512.t1 MTR_2g029910 57.097 310 131 2 18 326 24 332 3.26e-116 340
MS.gene034512.t1 MTR_2g029730 53.416 322 149 1 6 327 7 327 3.54e-116 339
MS.gene034512.t1 MTR_4g125940 60.145 276 105 2 53 326 2 274 3.42e-114 332
MS.gene034512.t1 MTR_3g094650 52.923 325 135 6 9 326 9 322 5.81e-110 323
MS.gene034512.t1 MTR_5g017860 51.250 320 150 5 9 326 11 326 1.91e-106 314
MS.gene034512.t1 MTR_5g017850 51.250 320 150 5 9 326 11 326 7.96e-106 312
MS.gene034512.t1 MTR_2g029830 59.922 257 102 1 70 326 6 261 7.11e-105 308
MS.gene034512.t1 MTR_5g021060 49.355 310 148 3 17 326 30 330 8.33e-104 307
MS.gene034512.t1 MTR_2g084080 50.794 315 144 4 12 326 14 317 1.40e-103 306
MS.gene034512.t1 MTR_3g094670 52.000 325 141 6 5 326 10 322 2.10e-103 306
MS.gene034512.t1 MTR_8g076820 50.000 310 146 3 17 326 30 330 9.87e-103 305
MS.gene034512.t1 MTR_3g072190 49.837 307 144 3 20 326 22 318 6.85e-102 302
MS.gene034512.t1 MTR_5g074970 49.221 321 149 5 10 326 16 326 1.52e-101 301
MS.gene034512.t1 MTR_2g084020 49.051 316 151 4 11 326 13 318 3.04e-101 300
MS.gene034512.t1 MTR_2g084110 49.524 315 148 4 12 326 14 317 1.23e-100 299
MS.gene034512.t1 MTR_4g029200 48.701 308 148 3 19 326 41 338 3.67e-100 298
MS.gene034512.t1 MTR_3g094630 50.625 320 144 5 10 326 14 322 1.17e-99 296
MS.gene034512.t1 MTR_2g084000 48.580 317 152 4 11 326 13 319 1.95e-99 296
MS.gene034512.t1 MTR_2g084010 49.186 307 147 3 20 326 21 318 3.87e-99 295
MS.gene034512.t1 MTR_3g466200 47.853 326 155 7 4 326 7 320 1.46e-98 294
MS.gene034512.t1 MTR_5g083860 47.130 331 158 6 2 326 6 325 7.53e-98 292
MS.gene034512.t1 MTR_5g074860 45.921 331 163 6 3 326 4 325 1.98e-97 291
MS.gene034512.t1 MTR_4g029170 47.059 323 155 6 10 326 9 321 3.35e-97 290
MS.gene034512.t1 MTR_3g466180 48.287 321 153 4 9 326 13 323 1.25e-96 289
MS.gene034512.t1 MTR_7g072510 45.483 321 163 4 8 326 2 312 2.23e-96 288
MS.gene034512.t1 MTR_4g083710 46.084 332 165 5 1 326 1 324 3.33e-95 285
MS.gene034512.t1 MTR_2g084090 47.205 322 155 5 10 326 7 318 3.41e-95 285
MS.gene034512.t1 MTR_1g022970 47.855 303 157 1 24 326 46 347 3.42e-95 286
MS.gene034512.t1 MTR_4g122640 48.185 303 153 3 24 326 38 336 2.47e-93 281
MS.gene034512.t1 MTR_4g029180 47.508 301 146 5 28 326 31 321 4.30e-93 280
MS.gene034512.t1 MTR_3g467600 45.171 321 165 4 9 326 12 324 2.67e-92 278
MS.gene034512.t1 MTR_1g115900 45.231 325 159 7 11 327 9 322 4.72e-91 275
MS.gene034512.t1 MTR_4g074995 47.170 318 143 6 13 326 12 308 8.43e-91 273
MS.gene034512.t1 MTR_5g074740 43.939 330 171 6 2 326 1 321 1.29e-90 273
MS.gene034512.t1 MTR_7g072480 44.892 323 166 4 4 326 6 316 1.33e-90 273
MS.gene034512.t1 MTR_5g014100 46.906 307 158 3 24 326 26 331 5.08e-90 272
MS.gene034512.t1 MTR_5g074760 43.333 330 173 6 2 326 1 321 5.24e-90 272
MS.gene034512.t1 MTR_4g029190 47.541 305 151 5 23 326 44 340 1.34e-89 271
MS.gene034512.t1 MTR_5g074710 43.807 331 170 7 2 326 1 321 2.53e-89 270
MS.gene034512.t1 MTR_4g074990 44.377 329 156 4 1 326 1 305 3.08e-89 270
MS.gene034512.t1 MTR_2g088770 42.357 314 174 5 15 326 17 325 1.09e-85 261
MS.gene034512.t1 MTR_4g114210 44.051 311 161 5 21 326 18 320 3.43e-85 259
MS.gene034512.t1 MTR_4g046713 40.741 324 187 4 4 326 7 326 1.66e-84 258
MS.gene034512.t1 MTR_4g030890 42.997 307 169 4 20 326 96 396 4.16e-84 260
MS.gene034512.t1 MTR_7g107520 44.590 305 162 5 22 326 23 320 9.07e-84 256
MS.gene034512.t1 MTR_7g026990 44.444 315 163 5 14 327 20 323 1.97e-83 255
MS.gene034512.t1 MTR_4g031140 41.776 304 171 4 24 327 28 325 2.55e-83 256
MS.gene034512.t1 MTR_5g049280 42.675 314 174 6 17 326 26 337 2.81e-83 255
MS.gene034512.t1 MTR_2g008710 42.901 324 169 7 9 326 12 325 1.50e-81 250
MS.gene034512.t1 MTR_3g092990 41.693 319 176 5 14 326 12 326 2.93e-81 250
MS.gene034512.t1 MTR_1g101830 40.439 319 181 6 9 326 12 322 5.79e-81 249
MS.gene034512.t1 MTR_5g074860 42.900 331 134 8 3 326 4 286 1.52e-80 246
MS.gene034512.t1 MTR_3g072190 48.846 260 123 3 67 326 2 251 1.78e-80 245
MS.gene034512.t1 MTR_4g074980 42.331 326 152 7 1 326 5 294 3.72e-80 246
MS.gene034512.t1 MTR_5g022870 41.615 322 174 10 9 326 5 316 3.90e-80 246
MS.gene034512.t1 MTR_6g043280 44.918 305 153 7 24 326 41 332 1.59e-79 246
MS.gene034512.t1 MTR_7g086820 41.639 305 168 6 22 326 18 312 5.46e-78 241
MS.gene034512.t1 MTR_6g027440 43.614 321 169 8 6 326 6 314 1.56e-77 240
MS.gene034512.t1 MTR_0155s0040 40.850 306 167 7 21 326 24 315 2.28e-77 239
MS.gene034512.t1 MTR_4g133800 42.809 299 159 6 29 326 46 333 5.91e-77 239
MS.gene034512.t1 MTR_1g009750 42.020 307 171 4 23 326 26 328 1.40e-76 238
MS.gene034512.t1 MTR_8g075100 42.157 306 162 9 24 326 26 319 6.01e-76 236
MS.gene034512.t1 MTR_1g077000 41.914 303 162 6 24 326 39 327 7.10e-75 233
MS.gene034512.t1 MTR_4g074980 45.946 259 127 4 1 256 5 253 3.79e-74 229
MS.gene034512.t1 MTR_2g437770 40.000 305 170 5 24 327 50 342 2.30e-73 230
MS.gene034512.t1 MTR_4g127670 42.208 308 167 3 23 326 23 323 2.51e-73 229
MS.gene034512.t1 MTR_2g099175 40.446 314 173 7 18 326 31 335 2.82e-73 229
MS.gene034512.t1 MTR_1g025980 39.319 323 185 8 2 322 1 314 2.83e-73 229
MS.gene034512.t1 MTR_7g029030 40.248 323 180 6 9 326 6 320 4.30e-73 229
MS.gene034512.t1 MTR_6g043240 41.613 310 166 6 19 327 37 332 2.41e-71 225
MS.gene034512.t1 MTR_4g095450 41.975 324 170 7 8 322 6 320 4.12e-71 224
MS.gene034512.t1 MTR_2g067440 38.855 332 168 9 24 325 60 386 1.70e-70 224
MS.gene034512.t1 MTR_2g008160 40.575 313 171 8 20 326 20 323 1.88e-69 219
MS.gene034512.t1 MTR_3g092990 39.498 319 172 6 14 326 12 315 2.74e-69 219
MS.gene034512.t1 MTR_1g038680 41.776 304 168 5 28 326 33 332 2.88e-69 219
MS.gene034512.t1 MTR_7g086870 39.869 306 169 7 22 326 20 311 5.90e-69 218
MS.gene034512.t1 MTR_5g016010 38.037 326 193 7 2 322 4 325 1.07e-68 218
MS.gene034512.t1 MTR_2g078610 37.538 333 174 7 24 325 76 405 2.32e-68 219
MS.gene034512.t1 MTR_4g087965 39.803 304 177 5 23 322 41 342 3.12e-68 217
MS.gene034512.t1 MTR_2g077990 37.538 333 174 7 24 325 76 405 3.60e-68 219
MS.gene034512.t1 MTR_1g090760 37.538 325 190 5 10 326 11 330 4.66e-68 216
MS.gene034512.t1 MTR_1g009750 39.803 304 165 5 23 326 26 311 5.27e-67 213
MS.gene034512.t1 MTR_1g086320 38.138 333 193 7 1 326 7 333 6.01e-67 213
MS.gene034512.t1 MTR_1g086490 37.278 338 196 7 1 326 7 340 2.18e-65 209
MS.gene034512.t1 MTR_2g008730 38.024 334 165 7 2 326 1 301 1.43e-64 206
MS.gene034512.t1 MTR_6g043460 38.111 307 174 6 19 322 31 324 7.31e-64 206
MS.gene034512.t1 MTR_5g033470 36.538 312 190 5 20 326 69 377 1.14e-62 204
MS.gene034512.t1 MTR_2g078280 37.500 320 166 7 24 312 76 392 1.28e-62 204
MS.gene034512.t1 MTR_3g105790 37.879 330 192 6 2 326 1 322 2.81e-61 198
MS.gene034512.t1 MTR_2g067450 37.829 304 182 5 24 325 11 309 1.17e-60 196
MS.gene034512.t1 MTR_2g029880 51.777 197 85 2 130 326 2 188 1.31e-60 193
MS.gene034512.t1 MTR_1g066710 34.740 308 189 4 23 327 26 324 3.56e-60 196
MS.gene034512.t1 MTR_8g062780 37.346 324 196 6 7 326 4 324 5.38e-60 195
MS.gene034512.t1 MTR_4g132490 36.688 308 183 5 23 326 28 327 5.71e-58 190
MS.gene034512.t1 MTR_0147s0010 34.769 325 175 6 21 325 74 381 1.57e-56 188
MS.gene034512.t1 MTR_1g066380 34.839 310 186 6 23 327 26 324 4.28e-56 185
MS.gene034512.t1 MTR_1g066640 34.839 310 186 6 23 327 26 324 2.47e-55 183
MS.gene034512.t1 MTR_1g066680 35.065 308 187 6 23 327 26 323 4.25e-55 182
MS.gene034512.t1 MTR_4g132110 32.628 331 197 7 7 322 5 324 7.43e-55 182
MS.gene034512.t1 MTR_0286s0010 37.037 324 189 11 10 326 19 334 3.59e-54 180
MS.gene034512.t1 MTR_6g008075 37.037 324 189 11 10 326 19 334 3.59e-54 180
MS.gene034512.t1 MTR_4g132110 33.333 336 193 9 7 322 5 329 7.89e-54 179
MS.gene034512.t1 MTR_2g008160 35.463 313 152 8 20 326 20 288 1.66e-51 172
MS.gene034512.t1 MTR_3g072210 44.792 192 97 3 136 326 55 238 7.55e-49 164
MS.gene034512.t1 MTR_5g074700 38.889 234 114 6 98 326 5 214 1.02e-46 157
MS.gene034512.t1 MTR_1g066380 35.094 265 156 6 68 327 3 256 3.59e-44 152
MS.gene034512.t1 MTR_2g008160 45.930 172 86 4 20 190 20 185 8.62e-44 149
MS.gene034512.t1 MTR_3g105790 38.247 251 145 4 79 326 3 246 4.19e-42 146
MS.gene034512.t1 MTR_3g072260 55.970 134 50 3 7 132 1 133 2.53e-39 135
MS.gene034512.t1 MTR_7g072490 37.052 251 94 5 70 320 2 188 2.08e-36 130
MS.gene034512.t1 MTR_2g077980 31.884 276 148 10 87 325 11 283 8.71e-35 128
MS.gene034512.t1 MTR_2g078560 31.839 223 119 6 134 325 99 319 4.07e-31 119
MS.gene034512.t1 MTR_5g058120 37.654 162 88 3 161 322 7 155 1.10e-25 103
MS.gene034512.t1 MTR_7g086790 34.896 192 102 5 71 262 17 185 4.54e-24 97.8
MS.gene034512.t1 MTR_4g114220 51.765 85 30 2 50 134 29 102 2.97e-19 83.2
MS.gene034512.t1 MTR_4g031040 32.558 172 72 3 87 258 4 131 4.79e-19 82.4
MS.gene034512.t1 MTR_6g048160 56.944 72 26 2 63 134 22 88 2.62e-18 79.0
MS.gene034512.t1 MTR_2g029930 46.316 95 25 3 20 103 15 94 1.20e-17 77.8
MS.gene034512.t1 MTR_5g074770 44.595 74 41 0 252 325 35 108 2.42e-17 77.0
MS.gene034512.t1 MTR_1g089005 37.190 121 68 3 22 136 13 131 3.45e-17 77.8
MS.gene034512.t1 MTR_3g462850 34.507 142 88 5 189 326 9 149 2.12e-16 75.5
MS.gene034512.t1 MTR_1g098320 43.243 74 40 1 249 322 49 120 1.52e-14 70.1
MS.gene034512.t1 MTR_7g086810 30.579 121 57 1 22 142 4 97 7.77e-14 70.5
MS.gene034512.t1 MTR_7g107500 43.011 93 50 2 234 326 8 97 9.16e-14 66.6
MS.gene034512.t1 MTR_4g012865 42.105 76 43 1 21 96 74 148 1.84e-13 67.4
MS.gene034512.t1 MTR_7g086785 46.575 73 37 2 70 142 4 74 6.75e-12 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene034512.t1 AT5G06720 72.340 329 85 2 5 328 8 335 9.05e-170 475
MS.gene034512.t1 AT5G06730 68.485 330 98 2 3 327 7 335 1.72e-159 450
MS.gene034512.t1 AT2G38380 55.692 325 141 3 4 326 10 333 1.99e-123 358
MS.gene034512.t1 AT5G19880 53.823 327 149 2 2 326 3 329 6.33e-123 356
MS.gene034512.t1 AT3G32980 53.823 327 146 4 4 326 9 334 4.32e-121 352
MS.gene034512.t1 AT2G38390 54.545 308 138 2 20 326 27 333 3.46e-120 350
MS.gene034512.t1 AT5G19890 54.859 319 135 4 10 326 16 327 1.00e-117 343
MS.gene034512.t1 AT3G49120 54.045 309 139 3 20 326 28 335 2.33e-116 340
MS.gene034512.t1 AT3G49110 53.398 309 141 3 20 326 29 336 2.49e-116 340
MS.gene034512.t1 AT4G08770 52.104 309 145 3 20 326 20 327 3.07e-114 335
MS.gene034512.t1 AT4G08780 51.133 309 148 3 20 326 20 327 5.75e-113 331
MS.gene034512.t1 AT4G36430 51.411 319 152 3 9 326 14 330 1.97e-111 327
MS.gene034512.t1 AT2G18150 52.117 307 145 2 22 328 34 338 6.93e-111 326
MS.gene034512.t1 AT5G66390 51.780 309 147 2 18 326 27 333 5.43e-110 323
MS.gene034512.t1 AT2G18140 52.159 301 142 2 28 328 39 337 7.06e-110 323
MS.gene034512.t1 AT5G05340 53.205 312 132 5 18 326 24 324 4.32e-108 318
MS.gene034512.t1 AT3G50990 49.240 329 159 3 4 326 15 341 1.06e-107 318
MS.gene034512.t1 AT1G49570 50.331 302 144 4 24 322 48 346 5.56e-102 303
MS.gene034512.t1 AT1G44970 48.265 317 155 2 18 326 31 346 4.58e-98 293
MS.gene034512.t1 AT1G14550 44.377 329 172 5 1 326 1 321 7.20e-92 277
MS.gene034512.t1 AT5G58390 46.894 322 158 6 8 326 5 316 2.10e-91 275
MS.gene034512.t1 AT5G58400 46.273 322 158 6 9 326 15 325 4.09e-90 272
MS.gene034512.t1 AT2G35380 46.084 332 166 6 7 326 5 335 9.32e-90 272
MS.gene034512.t1 AT2G22420 42.138 318 178 4 9 326 8 319 2.36e-89 271
MS.gene034512.t1 AT1G14540 44.860 321 165 4 10 326 3 315 4.54e-89 270
MS.gene034512.t1 AT4G16270 46.382 304 157 5 24 326 50 348 5.42e-88 268
MS.gene034512.t1 AT5G39580 46.951 328 161 9 1 326 3 319 6.98e-86 261
MS.gene034512.t1 AT5G64120 47.157 299 149 6 28 326 39 328 7.13e-86 262
MS.gene034512.t1 AT1G05260 41.304 322 180 6 8 326 10 325 1.27e-85 261
MS.gene034512.t1 AT3G01190 41.640 317 177 6 11 326 12 321 8.63e-85 259
MS.gene034512.t1 AT1G68850 42.532 308 170 7 24 326 30 335 1.18e-84 259
MS.gene034512.t1 AT3G03670 43.082 318 176 4 10 326 8 321 3.50e-84 257
MS.gene034512.t1 AT4G11290 41.667 324 177 5 5 326 13 326 6.70e-83 254
MS.gene034512.t1 AT5G15180 38.973 331 191 6 2 326 4 329 1.31e-82 253
MS.gene034512.t1 AT5G17820 42.038 314 168 6 14 326 13 313 1.81e-82 253
MS.gene034512.t1 AT2G41480 42.901 324 171 6 9 326 13 328 7.41e-82 251
MS.gene034512.t1 AT5G17820 42.038 314 168 6 14 326 66 366 2.22e-81 251
MS.gene034512.t1 AT2G18980 44.410 322 163 6 9 326 14 323 3.82e-80 247
MS.gene034512.t1 AT5G51890 40.062 322 185 6 6 326 8 322 6.37e-80 246
MS.gene034512.t1 AT4G30170 44.156 308 162 4 22 326 25 325 2.40e-79 245
MS.gene034512.t1 AT3G21770 40.323 310 176 6 16 322 21 324 1.90e-78 243
MS.gene034512.t1 AT5G14130 40.752 319 181 5 9 326 19 330 2.20e-76 238
MS.gene034512.t1 AT4G25980 40.683 322 174 6 10 326 17 326 4.20e-76 236
MS.gene034512.t1 AT5G14130 40.752 319 181 5 9 326 60 371 7.04e-76 238
MS.gene034512.t1 AT2G39040 41.667 312 172 6 21 326 43 350 3.04e-75 235
MS.gene034512.t1 AT1G71695 41.639 305 167 6 24 326 44 339 6.23e-75 234
MS.gene034512.t1 AT4G37530 41.613 310 175 4 20 326 23 329 1.06e-74 233
MS.gene034512.t1 AT3G49960 42.138 318 176 6 14 326 15 329 1.45e-74 233
MS.gene034512.t1 AT1G05240 39.073 302 175 6 24 322 26 321 2.16e-74 232
MS.gene034512.t1 AT1G05250 39.073 302 175 6 24 322 26 321 2.16e-74 232
MS.gene034512.t1 AT5G42180 40.594 303 170 7 24 325 23 316 2.42e-74 232
MS.gene034512.t1 AT5G64110 43.046 302 160 6 28 326 38 330 5.68e-73 229
MS.gene034512.t1 AT4G37520 40.584 308 177 4 22 326 25 329 7.39e-73 228
MS.gene034512.t1 AT5G24070 41.584 303 163 7 30 327 43 336 6.95e-71 224
MS.gene034512.t1 AT4G33420 38.462 325 185 7 3 326 15 325 8.94e-71 223
MS.gene034512.t1 AT2G43480 39.185 319 178 8 15 326 26 335 9.76e-71 223
MS.gene034512.t1 AT5G64100 40.333 300 169 6 28 326 41 331 2.02e-70 222
MS.gene034512.t1 AT5G67400 40.729 329 184 9 1 322 1 325 2.26e-70 222
MS.gene034512.t1 AT4G33420 38.820 322 182 7 6 326 65 372 4.18e-70 223
MS.gene034512.t1 AT4G37520 39.935 308 176 5 22 326 25 326 7.16e-70 221
MS.gene034512.t1 AT1G77100 42.105 323 166 8 14 326 8 319 1.23e-69 220
MS.gene034512.t1 AT1G30870 38.978 313 177 6 17 326 44 345 2.24e-69 220
MS.gene034512.t1 AT5G22410 39.329 328 180 12 4 323 6 322 3.74e-67 214
MS.gene034512.t1 AT4G33870 35.015 337 178 6 24 324 68 399 4.04e-67 216
MS.gene034512.t1 AT4G26010 38.558 319 178 8 10 326 7 309 2.70e-66 211
MS.gene034512.t1 AT4G26010 38.558 319 178 8 10 326 35 337 6.39e-66 211
MS.gene034512.t1 AT4G37530 42.636 258 144 3 20 274 23 279 7.30e-66 209
MS.gene034512.t1 AT2G35380 47.347 245 125 3 86 326 3 247 2.24e-65 206
MS.gene034512.t1 AT2G34060 35.362 345 197 9 1 323 3 343 2.86e-63 204
MS.gene034512.t1 AT4G31760 36.697 327 194 6 3 326 10 326 4.64e-62 201
MS.gene034512.t1 AT2G24800 38.511 309 178 5 22 326 29 329 1.05e-61 200
MS.gene034512.t1 AT4G17690 38.235 306 177 6 24 326 26 322 2.38e-61 199
MS.gene034512.t1 AT1G34510 36.533 323 183 9 8 326 5 309 3.69e-60 195
MS.gene034512.t1 AT5G47000 36.000 325 193 7 9 326 14 330 9.61e-60 195
MS.gene034512.t1 AT4G21960 35.526 304 180 5 24 322 31 323 3.40e-59 193
MS.gene034512.t1 AT2G37130 33.871 310 192 5 21 326 27 327 4.93e-57 187
MS.gene034512.t1 AT5G40150 34.824 313 194 5 16 326 24 328 1.56e-55 184
MS.gene034512.t1 AT1G24110 36.334 311 180 8 24 326 22 322 5.06e-55 182
MS.gene034512.t1 AT2G37130 33.663 303 188 5 28 326 3 296 8.51e-55 181
MS.gene034512.t1 AT3G28200 32.686 309 197 5 20 326 17 316 7.70e-53 176
MS.gene034512.t1 AT5G39580 48.969 194 90 6 9 201 11 196 3.20e-49 164
MS.gene034512.t1 AT3G17070 33.766 308 199 4 21 326 35 339 3.43e-46 160
MS.gene034512.t1 AT4G25980 46.286 175 89 3 20 194 67 236 7.16e-45 155
MS.gene034512.t1 AT2G24800 38.728 173 101 1 22 194 29 196 1.03e-32 122
MS.gene034512.t1 AT3G17070 32.700 263 171 5 66 326 18 276 1.44e-32 122
MS.gene034512.t1 AT1G77490 27.273 264 149 11 58 308 106 339 1.39e-15 77.4
MS.gene034512.t1 AT1G77490 27.273 264 149 11 58 308 106 339 1.89e-15 77.0
MS.gene034512.t1 AT4G08390 27.099 262 152 11 58 308 127 360 4.71e-14 72.8
MS.gene034512.t1 AT4G08390 27.099 262 152 11 58 308 127 360 4.71e-14 72.8
MS.gene034512.t1 AT4G08390 27.099 262 152 11 58 308 127 360 4.71e-14 72.8
MS.gene034512.t1 AT4G08390 27.099 262 152 11 58 308 126 359 6.14e-14 72.4
MS.gene034512.t1 AT3G42570 40.000 80 46 1 97 176 53 130 2.10e-11 61.6

Find 64 sgRNAs with CRISPR-Local

Find 146 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAGTAAATCCGTTTCCATTT+TGG 0.116074 1.1:-40983073 None:intergenic
CACCAATCTTCTAACCAAAA+TGG 0.186383 1.1:+40983145 MS.gene034512:CDS
TGCTCAATCAATGATCAATA+TGG 0.245564 1.1:+40983271 MS.gene034512:CDS
CGTTTGGAGAAGACCCATTT+TGG 0.266541 1.1:-40983159 None:intergenic
TTGCTAAATAGGTTGTGTTT+AGG 0.275276 1.1:-40983031 None:intergenic
CACTGAAGTTGAATAGTCTT+TGG 0.281803 1.1:-40982986 None:intergenic
TGATCATTGATTGAGCAAAT+TGG 0.294809 1.1:-40983265 None:intergenic
GTTGTGTTTAGGGTTGGATC+TGG 0.301999 1.1:-40983020 None:intergenic
TGCTAAATAGGTTGTGTTTA+GGG 0.307122 1.1:-40983030 None:intergenic
TTGTTGAAGTGTTGCTAAAT+AGG 0.319158 1.1:-40983042 None:intergenic
CAACAAAATTGTCCCCAAAA+TGG 0.326346 1.1:+40983059 MS.gene034512:CDS
TAACCTTGACACTACTGATA+TGG 0.329060 1.1:+40981273 MS.gene034512:CDS
TTTGTAGGTGCACACACATT+TGG 0.358621 1.1:+40982939 MS.gene034512:intron
CTCACAATGGATGACACATT+AGG 0.362069 1.1:-40980613 None:intergenic
CCACGAATGGAATTAACATT+TGG 0.362905 1.1:-40980904 None:intergenic
CTACAATCTGATTCACGAAT+TGG 0.365865 1.1:+40980655 MS.gene034512:CDS
ATCCTTCTTTATCCTTCAAA+TGG 0.371688 1.1:+40980556 MS.gene034512:CDS
TCACAATGGATGACACATTA+GGG 0.373517 1.1:-40980612 None:intergenic
GTTAATTCCATTCGTGGATT+CGG 0.390117 1.1:+40980910 MS.gene034512:CDS
CCAAATGTTAATTCCATTCG+TGG 0.404259 1.1:+40980904 MS.gene034512:CDS
TCTCCTTGAGTACCCGTTAA+GGG 0.417333 1.1:-40983305 None:intergenic
TTCTCCTTGAGTACCCGTTA+AGG 0.418744 1.1:-40983306 None:intergenic
ACTGAAGTTGAATAGTCTTT+GGG 0.419409 1.1:-40982985 None:intergenic
CTATTCAACTTCAGTGGTAC+TGG 0.423548 1.1:+40982993 MS.gene034512:CDS
ACCAATCTTCTAACCAAAAT+GGG 0.423614 1.1:+40983146 MS.gene034512:CDS
GGGTAATATTAGCCCCTTAA+CGG 0.428612 1.1:+40983292 MS.gene034512:CDS
TTTGTGTGATGTTTCCTCCT+TGG 0.431614 1.1:-40980864 None:intergenic
GCATTCAATTGTCCATTTGA+AGG 0.435758 1.1:-40980568 None:intergenic
ACTGATATGGTTGCATTGTC+AGG 0.437074 1.1:+40981286 MS.gene034512:CDS
TTGTGTTTAGGGTTGGATCT+GGG 0.444167 1.1:-40983019 None:intergenic
AAATAGGTTGTGTTTAGGGT+TGG 0.456087 1.1:-40983026 None:intergenic
CCTTCATGGAATGTACTACT+TGG 0.463746 1.1:+40981151 MS.gene034512:CDS
GGTAATATTAGCCCCTTAAC+GGG 0.465814 1.1:+40983293 MS.gene034512:CDS
GCTCAATCAATGATCAATAT+GGG 0.468721 1.1:+40983272 MS.gene034512:CDS
AGCAGAATCTTCTGTGTCCT+TGG 0.471737 1.1:+40981011 MS.gene034512:CDS
TCGAATGTATCTTGAGTTGA+TGG 0.480603 1.1:-40983110 None:intergenic
GTCCATTTGAAGGATAAAGA+AGG 0.481406 1.1:-40980558 None:intergenic
ATTGATTGTAAGAAAGTCAA+TGG 0.483590 1.1:+40983335 MS.gene034512:CDS
TCTCTTGAAAGTTCATGCTC+TGG 0.512392 1.1:+40980955 MS.gene034512:CDS
CAAAGCAATCATGAAAATGA+AGG 0.519577 1.1:-40980693 None:intergenic
GCTCTCAAATGGAGAGGGAA+TGG 0.524931 1.1:-40981218 None:intergenic
AATTGTCCCCAAAATGGAAA+CGG 0.526864 1.1:+40983065 MS.gene034512:CDS
CACAGAAGATTCTGCTGCAA+GGG 0.531206 1.1:-40981004 None:intergenic
CAAAATGGGTCTTCTCCAAA+CGG 0.536674 1.1:+40983160 MS.gene034512:CDS
ACATTGGCTAGGCTCTCAAA+TGG 0.539156 1.1:-40981229 None:intergenic
GATGGTTTAACAGCAAATCA+AGG 0.542662 1.1:+40981181 MS.gene034512:CDS
GTACTACTTGGAAGAAGAGA+TGG 0.542903 1.1:+40981163 MS.gene034512:CDS
CTCCTTGAGTACCCGTTAAG+GGG 0.548987 1.1:-40983304 None:intergenic
TGAGATAGTAGAAGAACCAT+TGG 0.563348 1.1:-40983201 None:intergenic
ATTTAGATGTAACATTGGCT+AGG 0.563686 1.1:-40981240 None:intergenic
AGCCCCTTAACGGGTACTCA+AGG 0.575325 1.1:+40983302 MS.gene034512:CDS
AGAGAATTTAGATGTAACAT+TGG 0.578600 1.1:-40981245 None:intergenic
ACACAGAAGATTCTGCTGCA+AGG 0.581239 1.1:-40981005 None:intergenic
AACCACACCGAATCCACGAA+TGG 0.596214 1.1:-40980917 None:intergenic
CCAAGTAGTACATTCCATGA+AGG 0.596279 1.1:-40981151 None:intergenic
TTCCATTCGTGGATTCGGTG+TGG 0.600076 1.1:+40980915 MS.gene034512:CDS
CGAATGTATCTTGAGTTGAT+GGG 0.601405 1.1:-40983109 None:intergenic
TTGAACAGCATTTCTCACAA+TGG 0.602243 1.1:-40980626 None:intergenic
CAAAGACTATTCAACTTCAG+TGG 0.603781 1.1:+40982987 MS.gene034512:CDS
GGCTAGGCTCTCAAATGGAG+AGG 0.610190 1.1:-40981224 None:intergenic
CAACCATATCAGTAGTGTCA+AGG 0.611707 1.1:-40981276 None:intergenic
GCTAGGCTCTCAAATGGAGA+GGG 0.615063 1.1:-40981223 None:intergenic
GAGTGAAAATTGCAGTCAGG+GGG 0.672593 1.1:+40981127 MS.gene034512:intron
GGTTTAACAGCAAATCAAGG+TGG 0.762041 1.1:+40981184 MS.gene034512:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TGTTAATTATTTCATTTATT+TGG + chr1.1:40981083-40981102 MS.gene034512:intron 10.0%
!!! ACAAAATTTAACTTAAAATT+AGG + chr1.1:40982244-40982263 MS.gene034512:intron 10.0%
!!! ATTTTAAATCATTGTAATTT+AGG + chr1.1:40981485-40981504 MS.gene034512:intron 10.0%
!!! CAAAATTTAACTTAAAATTA+GGG + chr1.1:40982245-40982264 MS.gene034512:intron 10.0%
!!! GTTAAAAAATTCTATTTTTT+TGG + chr1.1:40982171-40982190 MS.gene034512:intron 10.0%
!!! TTTTCTATTTAATCTTTAAA+TGG + chr1.1:40981337-40981356 MS.gene034512:intron 10.0%
!! AGAAAAATTGGTATATTTAT+AGG + chr1.1:40982328-40982347 MS.gene034512:intron 15.0%
!! GAAAAATTGGTATATTTATA+GGG + chr1.1:40982329-40982348 MS.gene034512:intron 15.0%
!! GTCAAAAAAAAAAAAAAACT+AGG - chr1.1:40982825-40982844 None:intergenic 15.0%
!! TAATGATTAATTGAAATGTA+TGG + chr1.1:40982914-40982933 MS.gene034512:intron 15.0%
!!! AAATTTCCATTTTTTGTAAA+AGG + chr1.1:40981818-40981837 MS.gene034512:intron 15.0%
!!! ATATGAATTTACTTTAAAAG+AGG - chr1.1:40981958-40981977 None:intergenic 15.0%
!!! GATATAATTTTAAAATCTCA+TGG - chr1.1:40981384-40981403 None:intergenic 15.0%
!!! TAGTGATTGAAAATTTTATA+GGG + chr1.1:40982276-40982295 MS.gene034512:intron 15.0%
!!! TATGAATTTACTTTAAAAGA+GGG - chr1.1:40981957-40981976 None:intergenic 15.0%
!!! TTTTTTTTGACAAGATAATT+AGG + chr1.1:40982834-40982853 MS.gene034512:intron 15.0%
!! AAATTTCAAAGTAATTACCA+AGG - chr1.1:40981031-40981050 None:intergenic 20.0%
!! AATCATTTGTCTTTACTTAT+AGG - chr1.1:40982642-40982661 None:intergenic 20.0%
!! ACATATAGTTAGAAAATTAG+AGG - chr1.1:40981066-40981085 None:intergenic 20.0%
!! CATATAGTTAGAAAATTAGA+GGG - chr1.1:40981065-40981084 None:intergenic 20.0%
!!! AAATTTTCAATCACTACTTT+TGG - chr1.1:40982272-40982291 None:intergenic 20.0%
!!! AAGTTGAAGAAATTTTTTAG+AGG - chr1.1:40981898-40981917 None:intergenic 20.0%
!!! AGTTGAAGAAATTTTTTAGA+GGG - chr1.1:40981897-40981916 None:intergenic 20.0%
!!! CATGTTTAACTCTAAAAATA+TGG + chr1.1:40982465-40982484 MS.gene034512:intron 20.0%
!!! GAAAAGTTGACATAATTTTA+GGG - chr1.1:40981866-40981885 None:intergenic 20.0%
!!! GAACAATTTTAAGTGATAAT+TGG - chr1.1:40981453-40981472 None:intergenic 20.0%
!!! GTAGTGATTGAAAATTTTAT+AGG + chr1.1:40982275-40982294 MS.gene034512:intron 20.0%
!!! TGAAAAGTTGACATAATTTT+AGG - chr1.1:40981867-40981886 None:intergenic 20.0%
!!! TTTTAAGTTCCTACAAAATT+AGG - chr1.1:40982445-40982464 None:intergenic 20.0%
! AGAACATGTATTCAAAAGTA+GGG + chr1.1:40981681-40981700 MS.gene034512:intron 25.0%
! AGAGAATTTAGATGTAACAT+TGG - chr1.1:40981248-40981267 None:intergenic 25.0%
! ATAAATCGTATTCGTTCATT+AGG + chr1.1:40980816-40980835 MS.gene034512:intron 25.0%
! ATCAAATCATGAGTCAATAT+GGG - chr1.1:40981605-40981624 None:intergenic 25.0%
! ATTCAAAATGACTAATGTGA+TGG - chr1.1:40981427-40981446 None:intergenic 25.0%
! ATTGATTGTAAGAAAGTCAA+TGG + chr1.1:40983335-40983354 MS.gene034512:CDS 25.0%
! ATTGGTTAAAAAATGCTGTT+TGG - chr1.1:40983250-40983269 None:intergenic 25.0%
! GAGAGACTAAAAAGAAAAAT+TGG + chr1.1:40982316-40982335 MS.gene034512:intron 25.0%
! TAAAAGCTTGTAACTTTGTA+GGG - chr1.1:40981724-40981743 None:intergenic 25.0%
! TAAATCGTATTCGTTCATTA+GGG + chr1.1:40980817-40980836 MS.gene034512:intron 25.0%
! TAGAACATGTATTCAAAAGT+AGG + chr1.1:40981680-40981699 MS.gene034512:intron 25.0%
! TATATTAGAACTAGTCAACT+AGG - chr1.1:40982861-40982880 None:intergenic 25.0%
! TTAAAAGCTTGTAACTTTGT+AGG - chr1.1:40981725-40981744 None:intergenic 25.0%
! TTGAAATGTATGGAATTTGT+AGG + chr1.1:40982924-40982943 MS.gene034512:intron 25.0%
!! ATGAAAACTCCTAATTTTGT+AGG + chr1.1:40982433-40982452 MS.gene034512:intron 25.0%
!! GTCACTATTTTCATTTTAGA+AGG + chr1.1:40981778-40981797 MS.gene034512:intron 25.0%
!!! ATCACATTAGTCATTTTGAA+TGG + chr1.1:40981426-40981445 MS.gene034512:intron 25.0%
!!! CATGCATTGTTTTGTAATTT+CGG + chr1.1:40982495-40982514 MS.gene034512:intron 25.0%
!!! TCATTTTAGAAGGACTATTT+TGG + chr1.1:40981788-40981807 MS.gene034512:intron 25.0%
!!! TCCATTTTTTGTAAAAGGTT+GGG + chr1.1:40981823-40981842 MS.gene034512:intron 25.0%
!!! TTCCATTTTTTGTAAAAGGT+TGG + chr1.1:40981822-40981841 MS.gene034512:intron 25.0%
AAATCGTATTCGTTCATTAG+GGG + chr1.1:40980818-40980837 MS.gene034512:intron 30.0%
AAGAACCATTGGTAGAAAAA+AGG - chr1.1:40983193-40983212 None:intergenic 30.0%
ACCAATCTTCTAACCAAAAT+GGG + chr1.1:40983146-40983165 MS.gene034512:CDS 30.0%
ACTGAAGTTGAATAGTCTTT+GGG - chr1.1:40982988-40983007 None:intergenic 30.0%
ATCCTTCTTTATCCTTCAAA+TGG + chr1.1:40980556-40980575 MS.gene034512:CDS 30.0%
CAAAGCAATCATGAAAATGA+AGG - chr1.1:40980696-40980715 None:intergenic 30.0%
CATCAAATCATGAGTCAATA+TGG - chr1.1:40981606-40981625 None:intergenic 30.0%
GCTCAATCAATGATCAATAT+GGG + chr1.1:40983272-40983291 MS.gene034512:CDS 30.0%
GCTTGTCAAGAAAAAAAACT+TGG - chr1.1:40982886-40982905 None:intergenic 30.0%
TCATCTAATAATAGAGCATG+TGG + chr1.1:40981641-40981660 MS.gene034512:intron 30.0%
TGCTAAATAGGTTGTGTTTA+GGG - chr1.1:40983033-40983052 None:intergenic 30.0%
TGCTCAATCAATGATCAATA+TGG + chr1.1:40983271-40983290 MS.gene034512:CDS 30.0%
TTGCTAAATAGGTTGTGTTT+AGG - chr1.1:40983034-40983053 None:intergenic 30.0%
! AAAAAATGCTGTTTGGTTGT+TGG - chr1.1:40983243-40983262 None:intergenic 30.0%
! AAGTAAATCCGTTTCCATTT+TGG - chr1.1:40983076-40983095 None:intergenic 30.0%
! AAGTGAAGATGACAAACTTT+TGG - chr1.1:40981929-40981948 None:intergenic 30.0%
! ACCCAACCTTTTACAAAAAA+TGG - chr1.1:40981827-40981846 None:intergenic 30.0%
! AGTAAATCCGTTTCCATTTT+GGG - chr1.1:40983075-40983094 None:intergenic 30.0%
! AGTGAAGATGACAAACTTTT+GGG - chr1.1:40981928-40981947 None:intergenic 30.0%
! ATAGTCTTTGGGAGAAAAAT+TGG - chr1.1:40982977-40982996 None:intergenic 30.0%
! ATTTAGATGTAACATTGGCT+AGG - chr1.1:40981243-40981262 None:intergenic 30.0%
! TGATCATTGATTGAGCAAAT+TGG - chr1.1:40983268-40983287 None:intergenic 30.0%
! TGTCGATTGAAATTTAGACA+TGG + chr1.1:40981575-40981594 MS.gene034512:intron 30.0%
!! TTGTTGAAGTGTTGCTAAAT+AGG - chr1.1:40983045-40983064 None:intergenic 30.0%
!! TTTTAGAAGGACTATTTTGG+AGG + chr1.1:40981791-40981810 MS.gene034512:intron 30.0%
AAGAGTGAAAATTGCAGTCA+GGG + chr1.1:40981125-40981144 MS.gene034512:intron 35.0%
AATTGTCCCCAAAATGGAAA+CGG + chr1.1:40983065-40983084 MS.gene034512:CDS 35.0%
CAAAGACTATTCAACTTCAG+TGG + chr1.1:40982987-40983006 MS.gene034512:CDS 35.0%
CAACAAAATTGTCCCCAAAA+TGG + chr1.1:40983059-40983078 MS.gene034512:CDS 35.0%
CACCAATCTTCTAACCAAAA+TGG + chr1.1:40983145-40983164 MS.gene034512:CDS 35.0%
CACTGAAGTTGAATAGTCTT+TGG - chr1.1:40982989-40983008 None:intergenic 35.0%
CCAAATGTTAATTCCATTCG+TGG + chr1.1:40980904-40980923 MS.gene034512:CDS 35.0%
CCACGAATGGAATTAACATT+TGG - chr1.1:40980907-40980926 None:intergenic 35.0%
CTACAATCTGATTCACGAAT+TGG + chr1.1:40980655-40980674 MS.gene034512:CDS 35.0%
GATGGTTTAACAGCAAATCA+AGG + chr1.1:40981181-40981200 MS.gene034512:CDS 35.0%
GCATTCAATTGTCCATTTGA+AGG - chr1.1:40980571-40980590 None:intergenic 35.0%
GTCCATTTGAAGGATAAAGA+AGG - chr1.1:40980561-40980580 None:intergenic 35.0%
GTTAATTCCATTCGTGGATT+CGG + chr1.1:40980910-40980929 MS.gene034512:CDS 35.0%
TAACCTTGACACTACTGATA+TGG + chr1.1:40981273-40981292 MS.gene034512:CDS 35.0%
TAAGAGTGAAAATTGCAGTC+AGG + chr1.1:40981124-40981143 MS.gene034512:intron 35.0%
TCACAATGGATGACACATTA+GGG - chr1.1:40980615-40980634 None:intergenic 35.0%
TGAGATAGTAGAAGAACCAT+TGG - chr1.1:40983204-40983223 None:intergenic 35.0%
TTGAACAGCATTTCTCACAA+TGG - chr1.1:40980629-40980648 None:intergenic 35.0%
! AAATAGGTTGTGTTTAGGGT+TGG - chr1.1:40983029-40983048 None:intergenic 35.0%
! ACTTTCAAGAGAGCTTTTGA+TGG - chr1.1:40980947-40980966 None:intergenic 35.0%
! CATTGGTAGAAAAAAGGTGT+TGG - chr1.1:40983187-40983206 None:intergenic 35.0%
! GTAAATCCGTTTCCATTTTG+GGG - chr1.1:40983074-40983093 None:intergenic 35.0%
! GTGAAGATGACAAACTTTTG+GGG - chr1.1:40981927-40981946 None:intergenic 35.0%
! TGAAGATGACAAACTTTTGG+GGG - chr1.1:40981926-40981945 None:intergenic 35.0%
!! CGAATGTATCTTGAGTTGAT+GGG - chr1.1:40983112-40983131 None:intergenic 35.0%
!! TCGAATGTATCTTGAGTTGA+TGG - chr1.1:40983113-40983132 None:intergenic 35.0%
!!! ACCCATTTTGGTTAGAAGAT+TGG - chr1.1:40983150-40983169 None:intergenic 35.0%
!!! CAACACCTTTTTTCTACCAA+TGG + chr1.1:40983185-40983204 MS.gene034512:CDS 35.0%
!!! TAATCAAAGTTTTGAGAGCG+AGG - chr1.1:40982569-40982588 None:intergenic 35.0%
ACTGATATGGTTGCATTGTC+AGG + chr1.1:40981286-40981305 MS.gene034512:CDS 40.0%
AGAGTGAAAATTGCAGTCAG+GGG + chr1.1:40981126-40981145 MS.gene034512:intron 40.0%
CAAAATGGGTCTTCTCCAAA+CGG + chr1.1:40983160-40983179 MS.gene034512:CDS 40.0%
CAACCATATCAGTAGTGTCA+AGG - chr1.1:40981279-40981298 None:intergenic 40.0%
CCAAGTAGTACATTCCATGA+AGG - chr1.1:40981154-40981173 None:intergenic 40.0%
CCTTCATGGAATGTACTACT+TGG + chr1.1:40981151-40981170 MS.gene034512:CDS 40.0%
CTATTCAACTTCAGTGGTAC+TGG + chr1.1:40982993-40983012 MS.gene034512:CDS 40.0%
CTCACAATGGATGACACATT+AGG - chr1.1:40980616-40980635 None:intergenic 40.0%
GGGTAATATTAGCCCCTTAA+CGG + chr1.1:40983292-40983311 MS.gene034512:CDS 40.0%
GGTAATATTAGCCCCTTAAC+GGG + chr1.1:40983293-40983312 MS.gene034512:CDS 40.0%
GGTTTAACAGCAAATCAAGG+TGG + chr1.1:40981184-40981203 MS.gene034512:CDS 40.0%
GTACTACTTGGAAGAAGAGA+TGG + chr1.1:40981163-40981182 MS.gene034512:CDS 40.0%
TCTCTTGAAAGTTCATGCTC+TGG + chr1.1:40980955-40980974 MS.gene034512:CDS 40.0%
TTTGTAGGTGCACACACATT+TGG + chr1.1:40982939-40982958 MS.gene034512:intron 40.0%
TTTGTGTGATGTTTCCTCCT+TGG - chr1.1:40980867-40980886 None:intergenic 40.0%
! TCGATTTTGTTAGACCAAGG+AGG + chr1.1:40980850-40980869 MS.gene034512:CDS 40.0%
! TTGTGTTTAGGGTTGGATCT+GGG - chr1.1:40983022-40983041 None:intergenic 40.0%
!! AAAAAAGGTGTTGGTCCGTT+TGG - chr1.1:40983178-40983197 None:intergenic 40.0%
ACACAGAAGATTCTGCTGCA+AGG - chr1.1:40981008-40981027 None:intergenic 45.0%
AGCAGAATCTTCTGTGTCCT+TGG + chr1.1:40981011-40981030 MS.gene034512:CDS 45.0%
CACAGAAGATTCTGCTGCAA+GGG - chr1.1:40981007-40981026 None:intergenic 45.0%
GAGTGAAAATTGCAGTCAGG+GGG + chr1.1:40981127-40981146 MS.gene034512:intron 45.0%
TCTCCTTGAGTACCCGTTAA+GGG - chr1.1:40983308-40983327 None:intergenic 45.0%
TTCTCCTTGAGTACCCGTTA+AGG - chr1.1:40983309-40983328 None:intergenic 45.0%
! ACATTGGCTAGGCTCTCAAA+TGG - chr1.1:40981232-40981251 None:intergenic 45.0%
! CGTTTGGAGAAGACCCATTT+TGG - chr1.1:40983162-40983181 None:intergenic 45.0%
! GTTGTGTTTAGGGTTGGATC+TGG - chr1.1:40983023-40983042 None:intergenic 45.0%
!!! GCGTCGATTTTGTTAGACCA+AGG + chr1.1:40980847-40980866 MS.gene034512:CDS 45.0%
!! AAATAAATAAAAATATAAGA+AGG - chr1.1:40980783-40980802 None:intergenic 5.0%
!!! AAGTAAATAAATTTTTTATA+AGG - chr1.1:40981755-40981774 None:intergenic 5.0%
!!! ATGAATTTTTATATTTTTTA+CGG + chr1.1:40982119-40982138 MS.gene034512:intron 5.0%
!!! TAAAAAATTCTAATTTTTTT+GGG - chr1.1:40982081-40982100 None:intergenic 5.0%
!!! TTAAAAAATTCTAATTTTTT+TGG - chr1.1:40982082-40982101 None:intergenic 5.0%
!!! TTATATTTTTATTTATTTAG+AGG + chr1.1:40980785-40980804 MS.gene034512:intron 5.0%
AACCACACCGAATCCACGAA+TGG - chr1.1:40980920-40980939 None:intergenic 50.0%
CTCCTTGAGTACCCGTTAAG+GGG - chr1.1:40983307-40983326 None:intergenic 50.0%
GCTAGGCTCTCAAATGGAGA+GGG - chr1.1:40981226-40981245 None:intergenic 50.0%
GCTCTCAAATGGAGAGGGAA+TGG - chr1.1:40981221-40981240 None:intergenic 50.0%
!! TTCCATTCGTGGATTCGGTG+TGG + chr1.1:40980915-40980934 MS.gene034512:CDS 50.0%
GGCTAGGCTCTCAAATGGAG+AGG - chr1.1:40981227-40981246 None:intergenic 55.0%
! AGCCCCTTAACGGGTACTCA+AGG + chr1.1:40983302-40983321 MS.gene034512:CDS 55.0%
TGCAGTCAGGGGGTCCTTCA+TGG + chr1.1:40981137-40981156 MS.gene034512:intron 60.0%


Chromosome Type Strat End Strand Name
chr1.1 gene 40980514 40983364 40980514 ID=MS.gene034512
chr1.1 mRNA 40980514 40983364 40980514 ID=MS.gene034512.t1;Parent=MS.gene034512
chr1.1 exon 40980514 40980720 40980514 ID=MS.gene034512.t1.exon1;Parent=MS.gene034512.t1
chr1.1 CDS 40980514 40980720 40980514 ID=cds.MS.gene034512.t1;Parent=MS.gene034512.t1
chr1.1 exon 40980838 40981032 40980838 ID=MS.gene034512.t1.exon2;Parent=MS.gene034512.t1
chr1.1 CDS 40980838 40981032 40980838 ID=cds.MS.gene034512.t1;Parent=MS.gene034512.t1
chr1.1 exon 40981142 40981307 40981142 ID=MS.gene034512.t1.exon3;Parent=MS.gene034512.t1
chr1.1 CDS 40981142 40981307 40981142 ID=cds.MS.gene034512.t1;Parent=MS.gene034512.t1
chr1.1 exon 40982946 40983364 40982946 ID=MS.gene034512.t1.exon4;Parent=MS.gene034512.t1
chr1.1 CDS 40982946 40983364 40982946 ID=cds.MS.gene034512.t1;Parent=MS.gene034512.t1
Gene Sequence

>MS.gene034512

ATGCTTTCTTCAACTATACAAGCTATCATTTTCTTTTCGTTAATCCTTCTTTATCCTTCAAATGGACAATTGAATGCAACTTTCTATTCTAACACATGCCCTAATGTGTCATCCATTGTGAGAAATGCTGTTCAACAAGCTCTACAATCTGATTCACGAATTGGTGCAAGCTTAACTCGCCTTCATTTTCATGATTGCTTTGTCAATGTAAATTTCATACAACTTCATTTTATTTTATTTTATTTTGTTTTCTTCAAGAATATTATCCTTCTTATATTTTTATTTATTTAGAGGACTAATTAATAAATCGTATTCGTTCATTAGGGGTGTGACGCGTCGATTTTGTTAGACCAAGGAGGAAACATCACACAAAGCGAGAAAAACGCAGCTCCAAATGTTAATTCCATTCGTGGATTCGGTGTGGTTGACACCATCAAAAGCTCTCTTGAAAGTTCATGCTCTGGCGTTGTATCTTGCGCTGATATTCTTGCCCTTGCAGCAGAATCTTCTGTGTCCTTGGTAATTACTTTGAAATTTCATTTTTTTTTCCCTCTAATTTTCTAACTATATGTTAATTATTTCATTTATTTGGAGTTAAATGACATTTAATTAAGAGTGAAAATTGCAGTCAGGGGGTCCTTCATGGAATGTACTACTTGGAAGAAGAGATGGTTTAACAGCAAATCAAGGTGGTGCGAATAGCTCCATTCCCTCTCCATTTGAGAGCCTAGCCAATGTTACATCTAAATTCTCTGCAGTTAACCTTGACACTACTGATATGGTTGCATTGTCAGGTAACAATATATGATATACAATAGTAACTTTTTCTATTTAATCTTTAAATGGTAGATCAGACAATATTTTGATCCATGAGATTTTAAAATTATATCAATAAATAAAAAAAAAATGTCCATCACATTAGTCATTTTGAATGGACCAATTATCACTTAAAATTGTTCAAGAAGATTTAGATTTTAAATCATTGTAATTTAGGAACTAAAATGATTAACTCTATATTAATTATTTATGAATTTGCTGATATACTCAATTTCTTAGTAGACTGTCGATTGAAATTTAGACATGGTCAACCCATATTGACTCATGATTTGATGAATTTCACTTTAATTTCATCTAATAATAGAGCATGTGGTCTTTTTTACGTATAATAGAACATGTATTCAAAAGTAGGGTTAAGTAAGTTTTTAATCCCTACAAAGTTACAAGCTTTTAAATTTAGTCCTTATAAAAAATTTATTTACTTTTAGTCACTATTTTCATTTTAGAAGGACTATTTTGGAGGACTAAAATTTCCATTTTTTGTAAAAGGTTGGGTTAAATATGTTTTTAGTCCCTAAAATTATGTCAACTTTTCATTTTAGTCCCTCTAAAAAATTTCTTCAACTTTTATTCCCCCAAAAGTTTGTCATCTTCACTTTTGATCCCTCTTTTAAAGTAAATTCATATGTATAATTTATTTTTTTAATAAACTTTTGCAGAAAATATTTCTTTCAAAAAAATAAAAATAAACTTTTGCAGAAAAATTTATAATATTATAAGAATCTATCCCAAAAAAATTAGAATTTTTTAACAAAACATGAATTAAATATGAATTTTTATATTTTTTACGGTTGAAAATTCATATTTAATTTTATATTTTGTTAAAAAATTCTATTTTTTTGGAAAGATTTTTACAATATTCTACACATTTTTGCATAATTTCGTTAAAAAATACAAAATTTAACTTAAAATTAGGGACCAAAAGTAGTGATTGAAAATTTTATAGGGACTAAAGAAAATTTTTAGAGAGACTAAAAAGAAAAATTGGTATATTTATAGGGAGCAAAAACATATTTAACTCTAAAAAGTATTGAAAATAAAGACTATTCTTACATACTATTAAAATTTTATAAAGATTAAACATGAAAACTCCTAATTTTGTAGGAACTTAAAACATGTTTAACTCTAAAAATATGGTAGTGCACATGCATTGTTTTGTAATTTCGGTTCATTTCTATTATATTTTGACTAATGATGATTACTACTTTTTTCTGACCTCGCTCTCAAAACTTTGATTAAGAAATAATATATGTAATTTTCATAAACAGAAAAAAGTGATATTTTTTTACCTATAAGTAAAGACAAATGATTATATCGCTTTCAAAACTTTGATTAAGAAATAATATATGTAAATTTCATAAACAGAAAAAAGTGATATTTTTATACCTATAAGTAAAGACAAATGATTATATAAAAGAAAAAGTCATCAATTTGTTTTTTGTAAAACATATAAAAAATTATACAATTAGTACCTAGTTTTTTTTTTTTTTTGACAAGATAATTAGGACCTAGTTGACTAGTTCTAATATATACCAAGTTTTTTTTCTTGACAAGCACACAAACTAATGATTAATTGAAATGTATGGAATTTGTAGGTGCACACACATTTGGACGTGCTCAATGCCAATTTTTCTCCCAAAGACTATTCAACTTCAGTGGTACTGGAAGCCCAGATCCAACCCTAAACACAACCTATTTAGCAACACTTCAACAAAATTGTCCCCAAAATGGAAACGGATTTACTTTGAACAACTTAGACCCATCAACTCAAGATACATTCGACAACAATTACTTCACCAATCTTCTAACCAAAATGGGTCTTCTCCAAACGGACCAACACCTTTTTTCTACCAATGGTTCTTCTACTATCTCAATTGTTAACAGTTTTGCCAACAACCAAACAGCATTTTTTAACCAATTTGCTCAATCAATGATCAATATGGGTAATATTAGCCCCTTAACGGGTACTCAAGGAGAAATCAGAATTGATTGTAAGAAAGTCAATGGAAGTTGA
Protein sequence

>MS.gene034512.t1

MLSSTIQAIIFFSLILLYPSNGQLNATFYSNTCPNVSSIVRNAVQQALQSDSRIGASLTRLHFHDCFVNGCDASILLDQGGNITQSEKNAAPNVNSIRGFGVVDTIKSSLESSCSGVVSCADILALAAESSVSLSGGPSWNVLLGRRDGLTANQGGANSSIPSPFESLANVTSKFSAVNLDTTDMVALSGAHTFGRAQCQFFSQRLFNFSGTGSPDPTLNTTYLATLQQNCPQNGNGFTLNNLDPSTQDTFDNNYFTNLLTKMGLLQTDQHLFSTNGSSTISIVNSFANNQTAFFNQFAQSMINMGNISPLTGTQGEIRIDCKKVNGS