Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene018002.t1 | XP_003625275.2 | 96.7 | 329 | 11 | 0 | 1 | 329 | 1 | 329 | 2.00E-174 | 621.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene018002.t1 | Q9LEH3 | 72.7 | 326 | 87 | 1 | 2 | 327 | 4 | 327 | 1.6e-129 | 463.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene018002.t1 | G7KVF1 | 96.7 | 329 | 11 | 0 | 1 | 329 | 45 | 373 | 1.4e-174 | 621.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene018002 | MS.gene71393 | PPI |
| MS.gene018002 | MS.gene61089 | PPI |
| MS.gene018002 | MS.gene051232 | PPI |
| MS.gene047667 | MS.gene018002 | PPI |
| MS.gene018002 | MS.gene85778 | PPI |
| MS.gene24862 | MS.gene018002 | PPI |
| MS.gene018002 | MS.gene010392 | PPI |
| MS.gene001264 | MS.gene018002 | PPI |
| MS.gene051996 | MS.gene018002 | PPI |
| MS.gene025145 | MS.gene018002 | PPI |
| MS.gene85260 | MS.gene018002 | PPI |
| MS.gene018002 | MS.gene012253 | PPI |
| MS.gene006133 | MS.gene018002 | PPI |
| MS.gene018002 | MS.gene88899 | PPI |
| MS.gene018002 | MS.gene010390 | PPI |
| MS.gene018002 | MS.gene026111 | PPI |
| MS.gene012254 | MS.gene018002 | PPI |
| MS.gene041124 | MS.gene018002 | PPI |
| MS.gene018002 | MS.gene041122 | PPI |
| MS.gene018002 | MS.gene047665 | PPI |
| MS.gene018002 | MS.gene60708 | PPI |
| MS.gene051844 | MS.gene018002 | PPI |
| MS.gene018002 | MS.gene71395 | PPI |
| MS.gene018002 | MS.gene006132 | PPI |
| MS.gene018002 | MS.gene032194 | PPI |
| MS.gene052951 | MS.gene018002 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene018002.t1 | MTR_7g093370 | 96.657 | 329 | 11 | 0 | 1 | 329 | 45 | 373 | 0.0 | 647 |
| MS.gene018002.t1 | MTR_1g054205 | 76.292 | 329 | 77 | 1 | 1 | 329 | 1 | 328 | 0.0 | 511 |
| MS.gene018002.t1 | MTR_2g029815 | 61.562 | 320 | 118 | 2 | 8 | 327 | 16 | 330 | 4.67e-137 | 393 |
| MS.gene018002.t1 | MTR_2g029830 | 61.564 | 307 | 117 | 1 | 21 | 327 | 24 | 329 | 8.72e-133 | 382 |
| MS.gene018002.t1 | MTR_2g029820 | 59.935 | 307 | 122 | 1 | 21 | 327 | 25 | 330 | 1.44e-132 | 382 |
| MS.gene018002.t1 | MTR_2g029860 | 59.006 | 322 | 128 | 2 | 10 | 328 | 11 | 331 | 2.00e-130 | 376 |
| MS.gene018002.t1 | MTR_2g029800 | 57.012 | 328 | 138 | 2 | 2 | 327 | 4 | 330 | 4.15e-130 | 375 |
| MS.gene018002.t1 | MTR_2g028980 | 57.895 | 323 | 135 | 1 | 5 | 327 | 9 | 330 | 1.28e-127 | 369 |
| MS.gene018002.t1 | MTR_2g029850 | 60.065 | 308 | 122 | 1 | 21 | 328 | 25 | 331 | 3.34e-127 | 368 |
| MS.gene018002.t1 | MTR_2g029560 | 58.147 | 313 | 130 | 1 | 16 | 328 | 15 | 326 | 1.61e-126 | 366 |
| MS.gene018002.t1 | MTR_2g029750 | 58.632 | 307 | 126 | 1 | 21 | 327 | 25 | 330 | 3.35e-126 | 365 |
| MS.gene018002.t1 | MTR_4g125940 | 55.488 | 328 | 141 | 2 | 2 | 327 | 5 | 329 | 7.00e-125 | 361 |
| MS.gene018002.t1 | MTR_2g029740 | 57.655 | 307 | 129 | 1 | 21 | 327 | 25 | 330 | 1.26e-124 | 361 |
| MS.gene018002.t1 | MTR_2g040000 | 55.247 | 324 | 136 | 3 | 10 | 327 | 11 | 331 | 2.41e-122 | 355 |
| MS.gene018002.t1 | MTR_2g029910 | 58.117 | 308 | 127 | 2 | 21 | 327 | 26 | 332 | 2.09e-121 | 353 |
| MS.gene018002.t1 | MTR_2g029730 | 56.869 | 313 | 134 | 1 | 16 | 328 | 16 | 327 | 1.92e-120 | 350 |
| MS.gene018002.t1 | MTR_3g094650 | 55.108 | 323 | 132 | 6 | 8 | 327 | 10 | 322 | 1.17e-118 | 345 |
| MS.gene018002.t1 | MTR_3g094670 | 55.763 | 321 | 130 | 5 | 9 | 327 | 12 | 322 | 1.20e-114 | 335 |
| MS.gene018002.t1 | MTR_5g021060 | 53.135 | 303 | 140 | 2 | 25 | 327 | 30 | 330 | 5.60e-114 | 333 |
| MS.gene018002.t1 | MTR_3g094630 | 55.140 | 321 | 132 | 5 | 9 | 327 | 12 | 322 | 1.24e-111 | 327 |
| MS.gene018002.t1 | MTR_4g125940 | 59.058 | 276 | 108 | 2 | 54 | 327 | 2 | 274 | 1.22e-110 | 323 |
| MS.gene018002.t1 | MTR_8g076820 | 52.145 | 303 | 143 | 2 | 25 | 327 | 30 | 330 | 8.39e-110 | 323 |
| MS.gene018002.t1 | MTR_5g017850 | 52.500 | 320 | 147 | 4 | 9 | 327 | 11 | 326 | 1.19e-109 | 322 |
| MS.gene018002.t1 | MTR_2g029830 | 61.089 | 257 | 99 | 1 | 71 | 327 | 6 | 261 | 8.54e-109 | 318 |
| MS.gene018002.t1 | MTR_3g466200 | 51.220 | 328 | 146 | 7 | 3 | 327 | 4 | 320 | 2.79e-108 | 318 |
| MS.gene018002.t1 | MTR_5g017860 | 52.215 | 316 | 145 | 5 | 13 | 327 | 16 | 326 | 2.52e-106 | 314 |
| MS.gene018002.t1 | MTR_5g083860 | 49.062 | 320 | 151 | 5 | 10 | 327 | 16 | 325 | 5.95e-106 | 313 |
| MS.gene018002.t1 | MTR_2g084080 | 49.846 | 325 | 151 | 5 | 5 | 327 | 3 | 317 | 1.09e-105 | 312 |
| MS.gene018002.t1 | MTR_3g072190 | 49.231 | 325 | 148 | 4 | 10 | 327 | 4 | 318 | 1.60e-105 | 311 |
| MS.gene018002.t1 | MTR_2g084020 | 49.231 | 325 | 154 | 5 | 5 | 327 | 3 | 318 | 1.54e-102 | 304 |
| MS.gene018002.t1 | MTR_5g074970 | 48.607 | 323 | 150 | 6 | 10 | 327 | 15 | 326 | 2.31e-102 | 303 |
| MS.gene018002.t1 | MTR_2g084000 | 47.678 | 323 | 158 | 4 | 6 | 327 | 7 | 319 | 4.54e-102 | 303 |
| MS.gene018002.t1 | MTR_2g084110 | 50.000 | 326 | 149 | 6 | 5 | 327 | 3 | 317 | 6.65e-102 | 302 |
| MS.gene018002.t1 | MTR_4g083710 | 48.598 | 321 | 154 | 4 | 10 | 327 | 12 | 324 | 1.49e-101 | 301 |
| MS.gene018002.t1 | MTR_4g029170 | 47.432 | 331 | 160 | 6 | 1 | 327 | 1 | 321 | 1.59e-101 | 301 |
| MS.gene018002.t1 | MTR_2g084010 | 49.837 | 307 | 145 | 3 | 21 | 327 | 21 | 318 | 2.86e-101 | 300 |
| MS.gene018002.t1 | MTR_7g072510 | 45.768 | 319 | 163 | 3 | 9 | 327 | 4 | 312 | 4.42e-99 | 295 |
| MS.gene018002.t1 | MTR_2g084090 | 48.750 | 320 | 152 | 5 | 10 | 327 | 9 | 318 | 5.20e-99 | 295 |
| MS.gene018002.t1 | MTR_1g022970 | 48.185 | 303 | 156 | 1 | 25 | 327 | 46 | 347 | 4.64e-97 | 291 |
| MS.gene018002.t1 | MTR_4g029200 | 46.057 | 317 | 161 | 3 | 11 | 327 | 32 | 338 | 7.97e-96 | 287 |
| MS.gene018002.t1 | MTR_5g074760 | 45.370 | 324 | 165 | 5 | 7 | 327 | 7 | 321 | 2.84e-95 | 285 |
| MS.gene018002.t1 | MTR_5g074740 | 45.679 | 324 | 164 | 5 | 7 | 327 | 7 | 321 | 2.93e-95 | 285 |
| MS.gene018002.t1 | MTR_5g014100 | 48.208 | 307 | 154 | 3 | 25 | 327 | 26 | 331 | 6.31e-95 | 285 |
| MS.gene018002.t1 | MTR_4g074995 | 47.678 | 323 | 141 | 6 | 10 | 327 | 9 | 308 | 2.32e-94 | 283 |
| MS.gene018002.t1 | MTR_5g074860 | 46.154 | 325 | 159 | 6 | 9 | 326 | 9 | 324 | 4.02e-94 | 283 |
| MS.gene018002.t1 | MTR_5g074710 | 45.483 | 321 | 163 | 5 | 10 | 327 | 10 | 321 | 5.00e-94 | 282 |
| MS.gene018002.t1 | MTR_7g072480 | 47.152 | 316 | 157 | 3 | 12 | 327 | 11 | 316 | 5.42e-94 | 282 |
| MS.gene018002.t1 | MTR_1g115900 | 44.753 | 324 | 166 | 6 | 6 | 327 | 9 | 321 | 5.80e-94 | 282 |
| MS.gene018002.t1 | MTR_4g031140 | 43.827 | 324 | 171 | 5 | 10 | 328 | 8 | 325 | 2.52e-93 | 281 |
| MS.gene018002.t1 | MTR_4g029180 | 47.841 | 301 | 145 | 5 | 29 | 327 | 31 | 321 | 8.64e-93 | 279 |
| MS.gene018002.t1 | MTR_4g030890 | 45.928 | 307 | 160 | 4 | 21 | 327 | 96 | 396 | 1.86e-92 | 281 |
| MS.gene018002.t1 | MTR_4g122640 | 46.205 | 303 | 159 | 3 | 25 | 327 | 38 | 336 | 3.87e-92 | 278 |
| MS.gene018002.t1 | MTR_3g466180 | 45.912 | 318 | 162 | 3 | 10 | 327 | 16 | 323 | 1.37e-90 | 273 |
| MS.gene018002.t1 | MTR_3g467600 | 44.308 | 325 | 170 | 4 | 6 | 327 | 8 | 324 | 1.71e-89 | 271 |
| MS.gene018002.t1 | MTR_4g046713 | 41.463 | 328 | 187 | 4 | 1 | 327 | 3 | 326 | 1.42e-88 | 268 |
| MS.gene018002.t1 | MTR_4g074990 | 44.343 | 327 | 152 | 5 | 7 | 327 | 3 | 305 | 2.44e-88 | 267 |
| MS.gene018002.t1 | MTR_2g088770 | 44.237 | 321 | 171 | 6 | 10 | 327 | 10 | 325 | 3.50e-88 | 268 |
| MS.gene018002.t1 | MTR_3g092990 | 42.462 | 325 | 177 | 4 | 7 | 327 | 8 | 326 | 6.93e-88 | 267 |
| MS.gene018002.t1 | MTR_5g049280 | 41.840 | 337 | 181 | 8 | 1 | 327 | 6 | 337 | 4.32e-87 | 265 |
| MS.gene018002.t1 | MTR_4g114210 | 45.659 | 311 | 154 | 6 | 23 | 327 | 19 | 320 | 1.02e-86 | 263 |
| MS.gene018002.t1 | MTR_3g072190 | 50.769 | 260 | 118 | 3 | 68 | 327 | 2 | 251 | 1.61e-86 | 261 |
| MS.gene018002.t1 | MTR_7g107520 | 43.653 | 323 | 174 | 6 | 6 | 327 | 5 | 320 | 7.27e-86 | 261 |
| MS.gene018002.t1 | MTR_7g086820 | 43.934 | 305 | 161 | 6 | 23 | 327 | 18 | 312 | 1.11e-84 | 258 |
| MS.gene018002.t1 | MTR_4g029190 | 44.231 | 312 | 166 | 4 | 16 | 327 | 37 | 340 | 2.03e-84 | 258 |
| MS.gene018002.t1 | MTR_0155s0040 | 43.974 | 307 | 154 | 8 | 23 | 327 | 25 | 315 | 3.51e-83 | 254 |
| MS.gene018002.t1 | MTR_2g008710 | 42.943 | 333 | 176 | 7 | 1 | 327 | 1 | 325 | 3.26e-82 | 252 |
| MS.gene018002.t1 | MTR_5g022870 | 42.902 | 317 | 169 | 9 | 12 | 327 | 11 | 316 | 7.96e-82 | 251 |
| MS.gene018002.t1 | MTR_6g027440 | 43.438 | 320 | 171 | 8 | 9 | 327 | 4 | 314 | 2.13e-81 | 250 |
| MS.gene018002.t1 | MTR_1g101830 | 41.358 | 324 | 179 | 7 | 5 | 327 | 9 | 322 | 3.86e-80 | 247 |
| MS.gene018002.t1 | MTR_1g077000 | 40.867 | 323 | 177 | 6 | 5 | 327 | 19 | 327 | 9.30e-80 | 246 |
| MS.gene018002.t1 | MTR_1g009750 | 42.724 | 323 | 177 | 5 | 10 | 327 | 9 | 328 | 1.10e-79 | 246 |
| MS.gene018002.t1 | MTR_2g099175 | 41.424 | 309 | 168 | 6 | 24 | 327 | 35 | 335 | 1.53e-79 | 246 |
| MS.gene018002.t1 | MTR_8g075100 | 43.421 | 304 | 161 | 8 | 25 | 327 | 26 | 319 | 3.35e-79 | 244 |
| MS.gene018002.t1 | MTR_7g026990 | 40.867 | 323 | 179 | 5 | 7 | 328 | 12 | 323 | 5.02e-79 | 244 |
| MS.gene018002.t1 | MTR_4g074980 | 43.260 | 319 | 147 | 6 | 10 | 327 | 9 | 294 | 8.70e-78 | 240 |
| MS.gene018002.t1 | MTR_3g092990 | 41.159 | 328 | 166 | 6 | 7 | 327 | 8 | 315 | 4.41e-77 | 239 |
| MS.gene018002.t1 | MTR_7g029030 | 41.195 | 318 | 176 | 5 | 12 | 327 | 12 | 320 | 1.49e-75 | 235 |
| MS.gene018002.t1 | MTR_4g127670 | 42.857 | 308 | 165 | 4 | 24 | 327 | 23 | 323 | 4.27e-75 | 234 |
| MS.gene018002.t1 | MTR_1g025980 | 40.938 | 320 | 179 | 7 | 5 | 323 | 4 | 314 | 4.41e-75 | 234 |
| MS.gene018002.t1 | MTR_4g087965 | 38.824 | 340 | 186 | 7 | 3 | 323 | 6 | 342 | 4.42e-75 | 234 |
| MS.gene018002.t1 | MTR_4g133800 | 41.806 | 299 | 162 | 6 | 30 | 327 | 46 | 333 | 8.45e-75 | 234 |
| MS.gene018002.t1 | MTR_2g437770 | 41.503 | 306 | 164 | 9 | 25 | 328 | 50 | 342 | 1.09e-74 | 233 |
| MS.gene018002.t1 | MTR_6g043280 | 39.583 | 336 | 180 | 8 | 2 | 327 | 10 | 332 | 2.58e-74 | 232 |
| MS.gene018002.t1 | MTR_5g074860 | 41.411 | 326 | 136 | 7 | 9 | 327 | 9 | 286 | 3.28e-74 | 230 |
| MS.gene018002.t1 | MTR_4g074980 | 47.619 | 252 | 121 | 4 | 10 | 257 | 9 | 253 | 7.67e-74 | 228 |
| MS.gene018002.t1 | MTR_2g067440 | 39.104 | 335 | 169 | 7 | 25 | 329 | 60 | 389 | 3.54e-73 | 231 |
| MS.gene018002.t1 | MTR_1g086320 | 39.640 | 333 | 187 | 7 | 6 | 327 | 4 | 333 | 1.77e-72 | 228 |
| MS.gene018002.t1 | MTR_2g078610 | 38.739 | 333 | 170 | 6 | 25 | 326 | 76 | 405 | 3.48e-72 | 229 |
| MS.gene018002.t1 | MTR_5g016010 | 39.062 | 320 | 187 | 5 | 8 | 323 | 10 | 325 | 3.77e-72 | 226 |
| MS.gene018002.t1 | MTR_2g077990 | 38.739 | 333 | 170 | 6 | 25 | 326 | 76 | 405 | 7.00e-72 | 228 |
| MS.gene018002.t1 | MTR_7g086870 | 40.196 | 306 | 168 | 7 | 23 | 327 | 20 | 311 | 3.85e-71 | 223 |
| MS.gene018002.t1 | MTR_1g038680 | 39.934 | 303 | 175 | 5 | 29 | 327 | 33 | 332 | 9.72e-71 | 223 |
| MS.gene018002.t1 | MTR_1g086490 | 38.824 | 340 | 187 | 8 | 6 | 327 | 4 | 340 | 1.42e-70 | 223 |
| MS.gene018002.t1 | MTR_4g095450 | 40.810 | 321 | 175 | 7 | 9 | 323 | 9 | 320 | 2.01e-70 | 222 |
| MS.gene018002.t1 | MTR_1g090760 | 36.890 | 328 | 203 | 3 | 2 | 327 | 5 | 330 | 8.00e-70 | 221 |
| MS.gene018002.t1 | MTR_1g009750 | 39.875 | 321 | 172 | 6 | 10 | 327 | 9 | 311 | 8.54e-69 | 217 |
| MS.gene018002.t1 | MTR_6g043240 | 41.667 | 312 | 163 | 9 | 20 | 328 | 37 | 332 | 9.64e-69 | 219 |
| MS.gene018002.t1 | MTR_2g008160 | 39.683 | 315 | 177 | 7 | 18 | 327 | 17 | 323 | 1.89e-68 | 217 |
| MS.gene018002.t1 | MTR_2g078280 | 38.558 | 319 | 162 | 6 | 25 | 312 | 76 | 391 | 4.54e-67 | 216 |
| MS.gene018002.t1 | MTR_2g008730 | 39.692 | 325 | 158 | 7 | 9 | 327 | 9 | 301 | 5.08e-67 | 213 |
| MS.gene018002.t1 | MTR_8g062780 | 37.695 | 321 | 195 | 4 | 9 | 327 | 7 | 324 | 2.02e-66 | 212 |
| MS.gene018002.t1 | MTR_5g033470 | 36.538 | 312 | 190 | 5 | 21 | 327 | 69 | 377 | 2.28e-64 | 208 |
| MS.gene018002.t1 | MTR_2g067450 | 39.159 | 309 | 171 | 6 | 25 | 326 | 11 | 309 | 2.94e-64 | 206 |
| MS.gene018002.t1 | MTR_2g029880 | 54.737 | 190 | 76 | 2 | 138 | 327 | 9 | 188 | 3.69e-62 | 197 |
| MS.gene018002.t1 | MTR_3g105790 | 37.888 | 322 | 189 | 5 | 9 | 327 | 9 | 322 | 9.99e-62 | 199 |
| MS.gene018002.t1 | MTR_1g066710 | 36.570 | 309 | 184 | 6 | 23 | 328 | 25 | 324 | 4.34e-61 | 198 |
| MS.gene018002.t1 | MTR_6g043460 | 38.762 | 307 | 172 | 8 | 20 | 323 | 31 | 324 | 8.26e-60 | 195 |
| MS.gene018002.t1 | MTR_0286s0010 | 35.692 | 325 | 199 | 6 | 6 | 327 | 17 | 334 | 1.12e-59 | 194 |
| MS.gene018002.t1 | MTR_6g008075 | 35.692 | 325 | 199 | 6 | 6 | 327 | 17 | 334 | 1.12e-59 | 194 |
| MS.gene018002.t1 | MTR_1g066680 | 36.102 | 313 | 187 | 7 | 19 | 328 | 21 | 323 | 3.20e-58 | 191 |
| MS.gene018002.t1 | MTR_0147s0010 | 33.540 | 322 | 177 | 5 | 25 | 326 | 77 | 381 | 6.44e-58 | 191 |
| MS.gene018002.t1 | MTR_1g066380 | 35.599 | 309 | 187 | 6 | 23 | 328 | 25 | 324 | 1.13e-57 | 189 |
| MS.gene018002.t1 | MTR_1g066640 | 35.922 | 309 | 186 | 6 | 23 | 328 | 25 | 324 | 5.82e-57 | 187 |
| MS.gene018002.t1 | MTR_4g132490 | 35.082 | 305 | 192 | 4 | 24 | 327 | 28 | 327 | 1.43e-56 | 186 |
| MS.gene018002.t1 | MTR_4g132110 | 34.653 | 303 | 184 | 6 | 25 | 323 | 32 | 324 | 6.80e-55 | 182 |
| MS.gene018002.t1 | MTR_4g132110 | 35.390 | 308 | 180 | 8 | 25 | 323 | 32 | 329 | 4.71e-54 | 180 |
| MS.gene018002.t1 | MTR_5g074700 | 41.379 | 232 | 111 | 5 | 99 | 327 | 5 | 214 | 2.02e-51 | 169 |
| MS.gene018002.t1 | MTR_2g008160 | 34.921 | 315 | 157 | 7 | 18 | 327 | 17 | 288 | 2.76e-51 | 171 |
| MS.gene018002.t1 | MTR_3g072210 | 45.833 | 192 | 95 | 3 | 137 | 327 | 55 | 238 | 2.87e-51 | 170 |
| MS.gene018002.t1 | MTR_1g066380 | 35.741 | 263 | 157 | 6 | 69 | 328 | 3 | 256 | 6.54e-46 | 157 |
| MS.gene018002.t1 | MTR_2g008160 | 44.253 | 174 | 92 | 3 | 18 | 191 | 17 | 185 | 7.19e-43 | 147 |
| MS.gene018002.t1 | MTR_3g105790 | 36.653 | 251 | 149 | 4 | 80 | 327 | 3 | 246 | 8.97e-40 | 140 |
| MS.gene018002.t1 | MTR_3g072260 | 60.909 | 110 | 42 | 1 | 24 | 133 | 25 | 133 | 1.99e-38 | 134 |
| MS.gene018002.t1 | MTR_2g077980 | 30.576 | 278 | 149 | 7 | 88 | 326 | 11 | 283 | 4.74e-36 | 132 |
| MS.gene018002.t1 | MTR_7g072490 | 36.800 | 250 | 94 | 5 | 71 | 320 | 2 | 187 | 1.05e-35 | 129 |
| MS.gene018002.t1 | MTR_2g078560 | 31.818 | 220 | 117 | 4 | 135 | 323 | 99 | 316 | 1.02e-32 | 124 |
| MS.gene018002.t1 | MTR_7g086790 | 36.316 | 190 | 98 | 5 | 72 | 261 | 17 | 183 | 2.84e-27 | 106 |
| MS.gene018002.t1 | MTR_5g058120 | 37.654 | 162 | 88 | 3 | 162 | 323 | 7 | 155 | 3.17e-25 | 102 |
| MS.gene018002.t1 | MTR_4g031040 | 34.483 | 174 | 70 | 3 | 86 | 259 | 2 | 131 | 5.49e-22 | 90.5 |
| MS.gene018002.t1 | MTR_3g462850 | 36.620 | 142 | 85 | 5 | 190 | 327 | 9 | 149 | 8.01e-21 | 87.8 |
| MS.gene018002.t1 | MTR_1g098320 | 50.000 | 76 | 36 | 1 | 248 | 323 | 47 | 120 | 8.33e-20 | 84.7 |
| MS.gene018002.t1 | MTR_6g048160 | 56.944 | 72 | 26 | 2 | 64 | 135 | 22 | 88 | 2.23e-18 | 79.3 |
| MS.gene018002.t1 | MTR_4g114220 | 49.412 | 85 | 32 | 2 | 51 | 135 | 29 | 102 | 9.64e-18 | 79.0 |
| MS.gene018002.t1 | MTR_5g074770 | 40.860 | 93 | 54 | 1 | 234 | 326 | 17 | 108 | 1.21e-17 | 77.8 |
| MS.gene018002.t1 | MTR_1g089005 | 39.496 | 119 | 64 | 3 | 25 | 137 | 15 | 131 | 1.39e-16 | 76.3 |
| MS.gene018002.t1 | MTR_2g029930 | 45.631 | 103 | 27 | 4 | 21 | 109 | 15 | 102 | 8.87e-16 | 72.4 |
| MS.gene018002.t1 | MTR_7g086810 | 32.520 | 123 | 56 | 1 | 21 | 143 | 2 | 97 | 1.22e-15 | 75.5 |
| MS.gene018002.t1 | MTR_7g107500 | 46.429 | 84 | 42 | 2 | 244 | 327 | 17 | 97 | 6.00e-14 | 67.4 |
| MS.gene018002.t1 | MTR_7g086785 | 34.783 | 138 | 82 | 4 | 71 | 205 | 4 | 136 | 1.34e-13 | 67.4 |
| MS.gene018002.t1 | MTR_4g012865 | 43.478 | 69 | 38 | 1 | 25 | 93 | 77 | 144 | 1.42e-13 | 67.8 |
| MS.gene018002.t1 | MTR_3g107060 | 26.667 | 255 | 136 | 8 | 57 | 308 | 106 | 312 | 2.25e-13 | 70.1 |
| MS.gene018002.t1 | MTR_3g088160 | 27.500 | 200 | 111 | 7 | 119 | 309 | 180 | 354 | 6.93e-13 | 69.3 |
| MS.gene018002.t1 | MTR_3g088160 | 27.500 | 200 | 111 | 7 | 119 | 309 | 180 | 354 | 7.88e-13 | 69.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene018002.t1 | AT5G06720 | 70.606 | 330 | 92 | 2 | 4 | 329 | 7 | 335 | 1.36e-167 | 469 |
| MS.gene018002.t1 | AT5G06730 | 68.421 | 323 | 101 | 1 | 6 | 328 | 14 | 335 | 1.51e-158 | 447 |
| MS.gene018002.t1 | AT2G38380 | 55.723 | 332 | 140 | 5 | 2 | 327 | 3 | 333 | 1.52e-124 | 361 |
| MS.gene018002.t1 | AT5G19880 | 55.140 | 321 | 140 | 3 | 9 | 327 | 11 | 329 | 3.93e-124 | 359 |
| MS.gene018002.t1 | AT2G38390 | 55.519 | 308 | 135 | 2 | 21 | 327 | 27 | 333 | 7.33e-123 | 357 |
| MS.gene018002.t1 | AT4G08780 | 55.016 | 309 | 136 | 3 | 21 | 327 | 20 | 327 | 6.34e-122 | 354 |
| MS.gene018002.t1 | AT3G32980 | 56.958 | 309 | 130 | 3 | 21 | 327 | 27 | 334 | 1.10e-121 | 354 |
| MS.gene018002.t1 | AT4G08770 | 55.016 | 309 | 136 | 3 | 21 | 327 | 20 | 327 | 6.83e-120 | 349 |
| MS.gene018002.t1 | AT3G49110 | 54.462 | 325 | 140 | 4 | 10 | 327 | 13 | 336 | 1.33e-118 | 346 |
| MS.gene018002.t1 | AT3G49120 | 54.154 | 325 | 144 | 4 | 7 | 327 | 12 | 335 | 2.77e-118 | 345 |
| MS.gene018002.t1 | AT5G19890 | 54.103 | 329 | 140 | 5 | 1 | 327 | 8 | 327 | 1.50e-117 | 342 |
| MS.gene018002.t1 | AT5G66390 | 52.443 | 307 | 144 | 2 | 21 | 327 | 29 | 333 | 5.65e-115 | 336 |
| MS.gene018002.t1 | AT2G18150 | 54.153 | 301 | 136 | 2 | 29 | 329 | 40 | 338 | 2.23e-114 | 335 |
| MS.gene018002.t1 | AT4G36430 | 53.443 | 305 | 140 | 2 | 23 | 327 | 28 | 330 | 4.05e-114 | 334 |
| MS.gene018002.t1 | AT2G18140 | 53.488 | 301 | 138 | 2 | 29 | 329 | 39 | 337 | 1.12e-113 | 333 |
| MS.gene018002.t1 | AT3G50990 | 51.140 | 307 | 148 | 2 | 21 | 327 | 37 | 341 | 6.80e-110 | 323 |
| MS.gene018002.t1 | AT5G05340 | 51.948 | 308 | 136 | 5 | 22 | 327 | 27 | 324 | 3.17e-106 | 313 |
| MS.gene018002.t1 | AT1G44970 | 50.654 | 306 | 150 | 1 | 22 | 327 | 42 | 346 | 1.31e-102 | 305 |
| MS.gene018002.t1 | AT1G49570 | 49.669 | 302 | 146 | 4 | 25 | 323 | 48 | 346 | 8.95e-100 | 298 |
| MS.gene018002.t1 | AT2G35380 | 51.140 | 307 | 145 | 4 | 25 | 327 | 30 | 335 | 6.11e-99 | 295 |
| MS.gene018002.t1 | AT5G58390 | 49.379 | 322 | 150 | 6 | 9 | 327 | 5 | 316 | 2.74e-97 | 290 |
| MS.gene018002.t1 | AT1G14550 | 45.652 | 322 | 166 | 4 | 7 | 327 | 8 | 321 | 1.74e-96 | 288 |
| MS.gene018002.t1 | AT5G58400 | 47.988 | 323 | 153 | 7 | 10 | 327 | 13 | 325 | 4.01e-96 | 288 |
| MS.gene018002.t1 | AT1G14540 | 45.652 | 322 | 165 | 4 | 8 | 327 | 2 | 315 | 5.22e-93 | 280 |
| MS.gene018002.t1 | AT2G22420 | 43.168 | 322 | 171 | 5 | 6 | 327 | 10 | 319 | 8.26e-92 | 277 |
| MS.gene018002.t1 | AT5G17820 | 44.304 | 316 | 163 | 5 | 12 | 327 | 11 | 313 | 1.39e-91 | 276 |
| MS.gene018002.t1 | AT5G17820 | 44.304 | 316 | 163 | 5 | 12 | 327 | 64 | 366 | 1.61e-90 | 275 |
| MS.gene018002.t1 | AT3G03670 | 45.938 | 320 | 167 | 4 | 10 | 327 | 6 | 321 | 9.90e-90 | 271 |
| MS.gene018002.t1 | AT1G68850 | 42.598 | 331 | 180 | 9 | 5 | 327 | 7 | 335 | 3.71e-89 | 270 |
| MS.gene018002.t1 | AT4G16270 | 45.667 | 300 | 157 | 5 | 29 | 327 | 54 | 348 | 1.21e-87 | 267 |
| MS.gene018002.t1 | AT5G64120 | 47.157 | 299 | 149 | 6 | 29 | 327 | 39 | 328 | 1.09e-86 | 264 |
| MS.gene018002.t1 | AT3G21770 | 43.871 | 310 | 165 | 6 | 17 | 323 | 21 | 324 | 4.52e-86 | 262 |
| MS.gene018002.t1 | AT2G41480 | 43.119 | 327 | 172 | 7 | 7 | 327 | 10 | 328 | 1.31e-84 | 258 |
| MS.gene018002.t1 | AT2G18980 | 43.692 | 325 | 171 | 5 | 7 | 327 | 7 | 323 | 1.78e-84 | 258 |
| MS.gene018002.t1 | AT4G11290 | 42.991 | 321 | 178 | 4 | 9 | 327 | 9 | 326 | 7.12e-84 | 256 |
| MS.gene018002.t1 | AT5G39580 | 47.335 | 319 | 156 | 9 | 12 | 327 | 10 | 319 | 8.18e-84 | 256 |
| MS.gene018002.t1 | AT1G05260 | 42.105 | 323 | 176 | 7 | 10 | 327 | 9 | 325 | 6.71e-83 | 254 |
| MS.gene018002.t1 | AT4G30170 | 43.366 | 309 | 163 | 5 | 23 | 327 | 25 | 325 | 2.35e-81 | 250 |
| MS.gene018002.t1 | AT3G01190 | 41.693 | 319 | 177 | 6 | 9 | 327 | 12 | 321 | 7.39e-81 | 249 |
| MS.gene018002.t1 | AT5G15180 | 39.319 | 323 | 187 | 6 | 9 | 327 | 12 | 329 | 2.76e-80 | 248 |
| MS.gene018002.t1 | AT4G25980 | 41.562 | 320 | 175 | 5 | 13 | 327 | 14 | 326 | 1.34e-79 | 246 |
| MS.gene018002.t1 | AT4G37530 | 43.689 | 309 | 168 | 4 | 18 | 323 | 20 | 325 | 2.69e-78 | 242 |
| MS.gene018002.t1 | AT1G77100 | 42.462 | 325 | 172 | 6 | 8 | 327 | 5 | 319 | 9.04e-78 | 241 |
| MS.gene018002.t1 | AT5G51890 | 39.628 | 323 | 185 | 7 | 6 | 327 | 9 | 322 | 1.01e-77 | 241 |
| MS.gene018002.t1 | AT5G42180 | 41.379 | 319 | 176 | 8 | 9 | 326 | 8 | 316 | 1.33e-77 | 240 |
| MS.gene018002.t1 | AT5G14130 | 40.000 | 325 | 189 | 4 | 4 | 327 | 11 | 330 | 2.69e-77 | 240 |
| MS.gene018002.t1 | AT5G14130 | 40.000 | 325 | 189 | 4 | 4 | 327 | 52 | 371 | 6.55e-77 | 240 |
| MS.gene018002.t1 | AT3G49960 | 43.038 | 316 | 172 | 6 | 12 | 323 | 14 | 325 | 1.11e-76 | 238 |
| MS.gene018002.t1 | AT2G39040 | 41.987 | 312 | 171 | 6 | 22 | 327 | 43 | 350 | 2.22e-75 | 236 |
| MS.gene018002.t1 | AT1G05240 | 40.134 | 299 | 168 | 5 | 29 | 323 | 30 | 321 | 9.48e-75 | 233 |
| MS.gene018002.t1 | AT1G05250 | 40.134 | 299 | 168 | 5 | 29 | 323 | 30 | 321 | 9.48e-75 | 233 |
| MS.gene018002.t1 | AT4G37520 | 41.447 | 304 | 172 | 4 | 23 | 323 | 25 | 325 | 1.13e-74 | 233 |
| MS.gene018002.t1 | AT1G71695 | 42.581 | 310 | 167 | 6 | 20 | 327 | 39 | 339 | 1.33e-74 | 234 |
| MS.gene018002.t1 | AT4G33420 | 42.071 | 309 | 164 | 7 | 20 | 327 | 31 | 325 | 2.59e-74 | 232 |
| MS.gene018002.t1 | AT5G64110 | 41.641 | 329 | 175 | 7 | 7 | 327 | 11 | 330 | 3.58e-74 | 232 |
| MS.gene018002.t1 | AT2G43480 | 39.185 | 319 | 178 | 8 | 16 | 327 | 26 | 335 | 9.96e-74 | 231 |
| MS.gene018002.t1 | AT4G33420 | 42.071 | 309 | 164 | 7 | 20 | 327 | 78 | 372 | 1.15e-73 | 232 |
| MS.gene018002.t1 | AT2G35380 | 50.813 | 246 | 117 | 3 | 86 | 327 | 2 | 247 | 2.19e-73 | 227 |
| MS.gene018002.t1 | AT5G64100 | 42.000 | 300 | 164 | 6 | 29 | 327 | 41 | 331 | 4.47e-73 | 229 |
| MS.gene018002.t1 | AT2G34060 | 38.762 | 307 | 182 | 5 | 22 | 324 | 39 | 343 | 2.65e-72 | 228 |
| MS.gene018002.t1 | AT5G67400 | 40.673 | 327 | 184 | 8 | 2 | 323 | 4 | 325 | 3.98e-72 | 226 |
| MS.gene018002.t1 | AT4G37520 | 40.789 | 304 | 171 | 5 | 23 | 323 | 25 | 322 | 5.74e-72 | 226 |
| MS.gene018002.t1 | AT5G24070 | 39.937 | 318 | 174 | 9 | 18 | 328 | 29 | 336 | 2.31e-71 | 225 |
| MS.gene018002.t1 | AT4G33870 | 35.988 | 339 | 178 | 5 | 22 | 325 | 65 | 399 | 3.96e-71 | 226 |
| MS.gene018002.t1 | AT1G34510 | 39.117 | 317 | 175 | 7 | 13 | 327 | 9 | 309 | 2.31e-70 | 221 |
| MS.gene018002.t1 | AT4G37530 | 45.594 | 261 | 138 | 3 | 18 | 275 | 20 | 279 | 9.47e-70 | 219 |
| MS.gene018002.t1 | AT4G26010 | 40.000 | 320 | 168 | 9 | 13 | 327 | 9 | 309 | 1.83e-69 | 219 |
| MS.gene018002.t1 | AT4G26010 | 40.000 | 320 | 168 | 9 | 13 | 327 | 37 | 337 | 3.22e-69 | 219 |
| MS.gene018002.t1 | AT5G22410 | 41.234 | 308 | 166 | 10 | 22 | 324 | 25 | 322 | 4.88e-68 | 216 |
| MS.gene018002.t1 | AT4G17690 | 38.487 | 304 | 179 | 3 | 25 | 327 | 26 | 322 | 5.90e-68 | 216 |
| MS.gene018002.t1 | AT4G31760 | 39.198 | 324 | 185 | 6 | 8 | 327 | 11 | 326 | 1.78e-66 | 212 |
| MS.gene018002.t1 | AT1G30870 | 38.961 | 308 | 170 | 9 | 25 | 327 | 51 | 345 | 4.37e-66 | 212 |
| MS.gene018002.t1 | AT5G47000 | 36.275 | 306 | 188 | 3 | 23 | 327 | 31 | 330 | 1.88e-65 | 209 |
| MS.gene018002.t1 | AT2G24800 | 38.835 | 309 | 177 | 5 | 23 | 327 | 29 | 329 | 2.99e-65 | 209 |
| MS.gene018002.t1 | AT1G24110 | 35.294 | 323 | 200 | 6 | 10 | 327 | 4 | 322 | 9.05e-63 | 202 |
| MS.gene018002.t1 | AT3G28200 | 33.871 | 310 | 192 | 4 | 21 | 327 | 17 | 316 | 4.37e-61 | 198 |
| MS.gene018002.t1 | AT4G21960 | 36.304 | 303 | 179 | 6 | 25 | 323 | 31 | 323 | 1.07e-59 | 194 |
| MS.gene018002.t1 | AT5G40150 | 35.390 | 308 | 191 | 3 | 21 | 327 | 28 | 328 | 3.08e-59 | 193 |
| MS.gene018002.t1 | AT2G37130 | 33.442 | 308 | 192 | 5 | 24 | 327 | 29 | 327 | 7.11e-54 | 179 |
| MS.gene018002.t1 | AT2G37130 | 33.663 | 303 | 188 | 5 | 29 | 327 | 3 | 296 | 1.24e-53 | 178 |
| MS.gene018002.t1 | AT3G17070 | 33.856 | 319 | 178 | 8 | 25 | 327 | 38 | 339 | 4.33e-49 | 167 |
| MS.gene018002.t1 | AT4G25980 | 46.448 | 183 | 93 | 3 | 13 | 195 | 59 | 236 | 3.55e-48 | 163 |
| MS.gene018002.t1 | AT5G39580 | 48.705 | 193 | 91 | 6 | 12 | 202 | 10 | 196 | 1.10e-46 | 158 |
| MS.gene018002.t1 | AT2G24800 | 40.462 | 173 | 98 | 1 | 23 | 195 | 29 | 196 | 1.17e-35 | 129 |
| MS.gene018002.t1 | AT3G17070 | 31.271 | 291 | 166 | 9 | 53 | 327 | 4 | 276 | 2.03e-34 | 127 |
| MS.gene018002.t1 | AT1G77490 | 26.515 | 264 | 151 | 11 | 59 | 309 | 106 | 339 | 8.13e-14 | 72.4 |
| MS.gene018002.t1 | AT3G42570 | 34.513 | 113 | 72 | 2 | 82 | 193 | 38 | 149 | 9.84e-14 | 68.2 |
| MS.gene018002.t1 | AT1G77490 | 26.515 | 264 | 151 | 11 | 59 | 309 | 106 | 339 | 1.01e-13 | 72.0 |
| MS.gene018002.t1 | AT4G35970 | 29.798 | 198 | 91 | 7 | 82 | 275 | 55 | 208 | 1.66e-12 | 66.2 |
Find 60 sgRNAs with CRISPR-Local
Find 87 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTCCTTGACTTCCCATTAA+TGG | 0.180025 | 7.4:+15495180 | None:intergenic |
| GGGTAATATCAGTCCATTAA+TGG | 0.236886 | 7.4:-15495193 | MS.gene018002:CDS |
| TGCTGAAGCTTCTGTATCTT+TGG | 0.257038 | 7.4:-15496215 | MS.gene018002:intron |
| TAAGCCAACAGCAGAAAATT+TGG | 0.257204 | 7.4:+15495934 | None:intergenic |
| TCCAATTGTAGGAAAGTTAA+TGG | 0.269235 | 7.4:-15495150 | MS.gene018002:CDS |
| TCCATTAACTTTCCTACAAT+TGG | 0.278391 | 7.4:+15495149 | None:intergenic |
| GAATATTAGCACTGTGAAAA+TGG | 0.281508 | 7.4:+15496658 | None:intergenic |
| TGTGTCTTGTGCTGATATTT+TGG | 0.282472 | 7.4:-15496245 | MS.gene018002:CDS |
| GAATTAGGTGCACATACTTT+TGG | 0.305338 | 7.4:-15495546 | MS.gene018002:intron |
| CAACAAAATTGTCCACAAAA+TGG | 0.305817 | 7.4:-15495426 | MS.gene018002:CDS |
| CATTAGTGGAAAACAATTCT+TGG | 0.347221 | 7.4:+15495301 | None:intergenic |
| CTGAACAACATTTCTCACTA+TGG | 0.348902 | 7.4:+15496565 | None:intergenic |
| CCACGAGCTGAATTATTGTT+AGG | 0.354824 | 7.4:+15496322 | None:intergenic |
| AGTGATCTAGTTGCATTATC+TGG | 0.368131 | 7.4:-15495905 | MS.gene018002:intron |
| TGCAGTCAGGAGGTCCTTCA+TGG | 0.392241 | 7.4:-15496054 | MS.gene018002:intron |
| CACTGAAGTTGAATAGTCTT+TGG | 0.398801 | 7.4:+15495499 | None:intergenic |
| TCGAAATTGTTTGGTGATGA+AGG | 0.418026 | 7.4:+15495375 | None:intergenic |
| GGTAATATCAGTCCATTAAT+GGG | 0.424844 | 7.4:-15495192 | MS.gene018002:CDS |
| CTCACTATGGAAGAAACATT+GGG | 0.436946 | 7.4:+15496578 | None:intergenic |
| GTTGAATTCAGTGTTGGATC+AGG | 0.449005 | 7.4:+15495465 | None:intergenic |
| AGAAAATTTGGCAGTGACAT+TGG | 0.460032 | 7.4:+15495946 | None:intergenic |
| GATTGTAGCAGCACCATTAG+TGG | 0.460308 | 7.4:+15495287 | None:intergenic |
| GAGAAATTAGATCCAATTGT+AGG | 0.464574 | 7.4:-15495161 | MS.gene018002:CDS |
| GATATTACCCATGTTAATCA+TGG | 0.480311 | 7.4:+15495206 | None:intergenic |
| GCTTTCAGTTGGAGCAGGAA+TGG | 0.491093 | 7.4:+15495973 | None:intergenic |
| GCTAAGCTTTCAGTTGGAGC+AGG | 0.495793 | 7.4:+15495968 | None:intergenic |
| TAGTTGTTGTCGAAATTGTT+TGG | 0.499968 | 7.4:+15495366 | None:intergenic |
| ACATTGGCTAAGCTTTCAGT+TGG | 0.500974 | 7.4:+15495962 | None:intergenic |
| TCTCACTATGGAAGAAACAT+TGG | 0.503003 | 7.4:+15496577 | None:intergenic |
| AAATCAAGGTCTTCTTCAAA+CGG | 0.509165 | 7.4:-15495325 | MS.gene018002:CDS |
| CCTTCATGGAATGTACTACT+TGG | 0.512650 | 7.4:-15496040 | MS.gene018002:CDS |
| CTATTCAACTTCAGTGGCAC+AGG | 0.520255 | 7.4:-15495492 | MS.gene018002:CDS |
| GAGCATGTGATGGATTAAGA+AGG | 0.529837 | 7.4:+15496633 | None:intergenic |
| TGTTCAGTCCATGATTAACA+TGG | 0.539490 | 7.4:-15495214 | MS.gene018002:CDS |
| CATGAAACTGAAGACGGGTT+AGG | 0.549547 | 7.4:+15496507 | None:intergenic |
| GTACTACTTGGCAGAAGGGA+TGG | 0.553719 | 7.4:-15496028 | MS.gene018002:CDS |
| GGTCTGATTGCAAACCAATC+TGG | 0.553725 | 7.4:-15496007 | MS.gene018002:CDS |
| CGAAATTGTTTGGTGATGAA+GGG | 0.556805 | 7.4:+15495376 | None:intergenic |
| AATTGTCCACAAAATGGAAG+TGG | 0.563268 | 7.4:-15495420 | MS.gene018002:CDS |
| GAATGTACTACTTGGCAGAA+GGG | 0.569042 | 7.4:-15496032 | MS.gene018002:CDS |
| CATGTGATGGATTAAGAAGG+AGG | 0.571412 | 7.4:+15496636 | None:intergenic |
| GAGGTTAGTTGAGCATGTGA+TGG | 0.579020 | 7.4:+15496623 | None:intergenic |
| AGATATGTTGAATTCAGTGT+TGG | 0.579335 | 7.4:+15495459 | None:intergenic |
| GGAATGTACTACTTGGCAGA+AGG | 0.583445 | 7.4:-15496033 | MS.gene018002:CDS |
| GTTCAGTCCATGATTAACAT+GGG | 0.587414 | 7.4:-15495213 | MS.gene018002:CDS |
| GCTTGCAAAGTTGTTAACAA+TGG | 0.593422 | 7.4:+15495263 | None:intergenic |
| GCAATCATGAAACTGAAGAC+GGG | 0.594589 | 7.4:+15496502 | None:intergenic |
| AGTCCATTAATGGGAAGTCA+AGG | 0.598007 | 7.4:-15495183 | MS.gene018002:CDS |
| AGCAATCATGAAACTGAAGA+CGG | 0.599227 | 7.4:+15496501 | None:intergenic |
| TGGATGTGTTGGCACCAGAT+TGG | 0.602779 | 7.4:+15495993 | None:intergenic |
| CCAAGTAGTACATTCCATGA+AGG | 0.604615 | 7.4:+15496040 | None:intergenic |
| GTTAATCATGGACTGAACAA+AGG | 0.607469 | 7.4:+15495218 | None:intergenic |
| CAAAGACTATTCAACTTCAG+TGG | 0.618577 | 7.4:-15495498 | MS.gene018002:CDS |
| CTGAAGACGGGTTAGGCTCG+CGG | 0.619803 | 7.4:+15496514 | None:intergenic |
| CCTAACAATAATTCAGCTCG+TGG | 0.620664 | 7.4:-15496322 | MS.gene018002:CDS |
| TGGAGCAGGAATGGATGTGT+TGG | 0.622693 | 7.4:+15495982 | None:intergenic |
| TCAGCACAAGACACAACAGC+AGG | 0.630251 | 7.4:+15496253 | None:intergenic |
| GATGTATATTTGCAGTCAGG+AGG | 0.632669 | 7.4:-15496064 | MS.gene018002:intron |
| GTTAGGCTCGCGGTAATACG+AGG | 0.667312 | 7.4:+15496524 | None:intergenic |
| TCACTATGGAAGAAACATTG+GGG | 0.713143 | 7.4:+15496579 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAATTAACTAAATATCAATT+AGG | + | chr7.4:15495636-15495655 | None:intergenic | 10.0% |
| !!! | CATTTTTTTTTTTTAACTAT+TGG | - | chr7.4:15496233-15496252 | MS.gene018002:CDS | 10.0% |
| !! | ATTTCAACAATTATATCTAA+TGG | - | chr7.4:15496112-15496131 | MS.gene018002:intron | 15.0% |
| !!! | TTATTAATTTGTGTATTTCA+GGG | - | chr7.4:15495414-15495433 | MS.gene018002:CDS | 15.0% |
| !! | AGACTTTAATTAGAATATGT+TGG | - | chr7.4:15495965-15495984 | MS.gene018002:CDS | 20.0% |
| !! | TAATTAGAATATGTTGGATT+AGG | - | chr7.4:15495971-15495990 | MS.gene018002:CDS | 20.0% |
| !! | TAGCAAACTAATATTTATCA+TGG | - | chr7.4:15495687-15495706 | MS.gene018002:intron | 20.0% |
| !! | TATATCTAATGGTTGAAATT+TGG | - | chr7.4:15496123-15496142 | MS.gene018002:intron | 20.0% |
| !!! | GTTATTAATTTGTGTATTTC+AGG | - | chr7.4:15495413-15495432 | MS.gene018002:CDS | 20.0% |
| ! | AAGAATCTTCTCAAAAATCA+AGG | - | chr7.4:15496484-15496503 | MS.gene018002:intron | 25.0% |
| ! | GTGAAAATGGAATAAAAAGT+AGG | + | chr7.4:15495155-15495174 | None:intergenic | 25.0% |
| !! | AAGTTTTCATGAGTTAAACT+AGG | - | chr7.4:15496062-15496081 | MS.gene018002:intron | 25.0% |
| AAATCAAGGTCTTCTTCAAA+CGG | - | chr7.4:15496498-15496517 | MS.gene018002:CDS | 30.0% | |
| AGATATGTTGAATTCAGTGT+TGG | + | chr7.4:15496367-15496386 | None:intergenic | 30.0% | |
| CAAATGGATCAACTTGAATT+AGG | - | chr7.4:15496262-15496281 | MS.gene018002:CDS | 30.0% | |
| CAACAAAATTGTCCACAAAA+TGG | - | chr7.4:15496397-15496416 | MS.gene018002:intron | 30.0% | |
| CATTAGTGGAAAACAATTCT+TGG | + | chr7.4:15496525-15496544 | None:intergenic | 30.0% | |
| GAATATTAGCACTGTGAAAA+TGG | + | chr7.4:15495168-15495187 | None:intergenic | 30.0% | |
| GAGAAATTAGATCCAATTGT+AGG | - | chr7.4:15496662-15496681 | MS.gene018002:CDS | 30.0% | |
| GATATTACCCATGTTAATCA+TGG | + | chr7.4:15496620-15496639 | None:intergenic | 30.0% | |
| GGTAATATCAGTCCATTAAT+GGG | - | chr7.4:15496631-15496650 | MS.gene018002:CDS | 30.0% | |
| TAGTTGTTGTCGAAATTGTT+TGG | + | chr7.4:15496460-15496479 | None:intergenic | 30.0% | |
| TCCAATTGTAGGAAAGTTAA+TGG | - | chr7.4:15496673-15496692 | MS.gene018002:CDS | 30.0% | |
| TCCATTAACTTTCCTACAAT+TGG | + | chr7.4:15496677-15496696 | None:intergenic | 30.0% | |
| TGATTAATGAGCTAGAGTTT+AGG | - | chr7.4:15495371-15495390 | MS.gene018002:CDS | 30.0% | |
| ! | CAAGAATTGTTTTCCACTAA+TGG | - | chr7.4:15496523-15496542 | MS.gene018002:CDS | 30.0% |
| ! | GCATCTCTTTTATTAGATCA+AGG | - | chr7.4:15495444-15495463 | MS.gene018002:CDS | 30.0% |
| ! | TAACTATTGGTTGACACAAA+TGG | - | chr7.4:15496246-15496265 | MS.gene018002:CDS | 30.0% |
| ! | TCTCTTTTATTAGATCAAGG+TGG | - | chr7.4:15495447-15495466 | MS.gene018002:CDS | 30.0% |
| AATTGTCCACAAAATGGAAG+TGG | - | chr7.4:15496403-15496422 | MS.gene018002:intron | 35.0% | |
| AGAAAATTTGGCAGTGACAT+TGG | + | chr7.4:15495880-15495899 | None:intergenic | 35.0% | |
| AGCAATCATGAAACTGAAGA+CGG | + | chr7.4:15495325-15495344 | None:intergenic | 35.0% | |
| AGGCTTCAAAAAAAGCTGTT+TGG | + | chr7.4:15496588-15496607 | None:intergenic | 35.0% | |
| AGTGATCTAGTTGCATTATC+TGG | - | chr7.4:15495918-15495937 | MS.gene018002:CDS | 35.0% | |
| CAAAGACTATTCAACTTCAG+TGG | - | chr7.4:15496325-15496344 | MS.gene018002:CDS | 35.0% | |
| CACTGAAGTTGAATAGTCTT+TGG | + | chr7.4:15496327-15496346 | None:intergenic | 35.0% | |
| CTCACTATGGAAGAAACATT+GGG | + | chr7.4:15495248-15495267 | None:intergenic | 35.0% | |
| CTGAACAACATTTCTCACTA+TGG | + | chr7.4:15495261-15495280 | None:intergenic | 35.0% | |
| GATGATGTATATTTGCAGTC+AGG | - | chr7.4:15495756-15495775 | MS.gene018002:intron | 35.0% | |
| GCTTGCAAAGTTGTTAACAA+TGG | + | chr7.4:15496563-15496582 | None:intergenic | 35.0% | |
| GGGTAATATCAGTCCATTAA+TGG | - | chr7.4:15496630-15496649 | MS.gene018002:CDS | 35.0% | |
| GTTCAGTCCATGATTAACAT+GGG | - | chr7.4:15496610-15496629 | MS.gene018002:CDS | 35.0% | |
| TAAGCCAACAGCAGAAAATT+TGG | + | chr7.4:15495892-15495911 | None:intergenic | 35.0% | |
| TCACTATGGAAGAAACATTG+GGG | + | chr7.4:15495247-15495266 | None:intergenic | 35.0% | |
| TCTCACTATGGAAGAAACAT+TGG | + | chr7.4:15495249-15495268 | None:intergenic | 35.0% | |
| TGTTCAGTCCATGATTAACA+TGG | - | chr7.4:15496609-15496628 | MS.gene018002:CDS | 35.0% | |
| ! | AGGACATGAATTTTCAACAG+AGG | + | chr7.4:15495553-15495572 | None:intergenic | 35.0% |
| ! | GAATTAGGTGCACATACTTT+TGG | - | chr7.4:15496277-15496296 | MS.gene018002:CDS | 35.0% |
| ! | GTTAATCATGGACTGAACAA+AGG | + | chr7.4:15496608-15496627 | None:intergenic | 35.0% |
| !! | CGAAATTGTTTGGTGATGAA+GGG | + | chr7.4:15496450-15496469 | None:intergenic | 35.0% |
| !! | TCGAAATTGTTTGGTGATGA+AGG | + | chr7.4:15496451-15496470 | None:intergenic | 35.0% |
| !! | TGTGTCTTGTGCTGATATTT+TGG | - | chr7.4:15495578-15495597 | MS.gene018002:intron | 35.0% |
| !!! | TGTTTTCGAGTAGAATGTTG+AGG | + | chr7.4:15495222-15495241 | None:intergenic | 35.0% |
| AGTCCATTAATGGGAAGTCA+AGG | - | chr7.4:15496640-15496659 | MS.gene018002:CDS | 40.0% | |
| CCAAGTAGTACATTCCATGA+AGG | + | chr7.4:15495786-15495805 | None:intergenic | 40.0% | |
| CCACGAGCTGAATTATTGTT+AGG | + | chr7.4:15495504-15495523 | None:intergenic | 40.0% | |
| CCTAACAATAATTCAGCTCG+TGG | - | chr7.4:15495501-15495520 | MS.gene018002:CDS | 40.0% | |
| CCTTCATGGAATGTACTACT+TGG | - | chr7.4:15495783-15495802 | MS.gene018002:intron | 40.0% | |
| GAATGTACTACTTGGCAGAA+GGG | - | chr7.4:15495791-15495810 | MS.gene018002:intron | 40.0% | |
| GATGTATATTTGCAGTCAGG+AGG | - | chr7.4:15495759-15495778 | MS.gene018002:intron | 40.0% | |
| GCAATCATGAAACTGAAGAC+GGG | + | chr7.4:15495324-15495343 | None:intergenic | 40.0% | |
| TCTCCTTGACTTCCCATTAA+TGG | + | chr7.4:15496646-15496665 | None:intergenic | 40.0% | |
| TGCTGAAGCTTCTGTATCTT+TGG | - | chr7.4:15495608-15495627 | MS.gene018002:intron | 40.0% | |
| ! | ACATTGGCTAAGCTTTCAGT+TGG | + | chr7.4:15495864-15495883 | None:intergenic | 40.0% |
| ! | ACTGCCAAATTTTCTGCTGT+TGG | - | chr7.4:15495885-15495904 | MS.gene018002:intron | 40.0% |
| ! | GTGTTACCACTTCCATTTTG+TGG | + | chr7.4:15496412-15496431 | None:intergenic | 40.0% |
| ! | GTTGAATTCAGTGTTGGATC+AGG | + | chr7.4:15496361-15496380 | None:intergenic | 40.0% |
| !! | CATGTGATGGATTAAGAAGG+AGG | + | chr7.4:15495190-15495209 | None:intergenic | 40.0% |
| !! | GAGCATGTGATGGATTAAGA+AGG | + | chr7.4:15495193-15495212 | None:intergenic | 40.0% |
| CTATTCAACTTCAGTGGCAC+AGG | - | chr7.4:15496331-15496350 | MS.gene018002:CDS | 45.0% | |
| CTGCACTAAGTGAACGACTA+AGG | + | chr7.4:15496088-15496107 | None:intergenic | 45.0% | |
| CTTAGTCGTTCACTTAGTGC+AGG | - | chr7.4:15496086-15496105 | MS.gene018002:intron | 45.0% | |
| GATTGTAGCAGCACCATTAG+TGG | + | chr7.4:15496539-15496558 | None:intergenic | 45.0% | |
| GGAATGTACTACTTGGCAGA+AGG | - | chr7.4:15495790-15495809 | MS.gene018002:intron | 45.0% | |
| GGTCTGATTGCAAACCAATC+TGG | - | chr7.4:15495816-15495835 | MS.gene018002:intron | 45.0% | |
| GTTGAAATTTGGACGCACGA+CGG | - | chr7.4:15496134-15496153 | MS.gene018002:intron | 45.0% | |
| ! | CATGAAACTGAAGACGGGTT+AGG | + | chr7.4:15495319-15495338 | None:intergenic | 45.0% |
| ! | GAGGTTAGTTGAGCATGTGA+TGG | + | chr7.4:15495203-15495222 | None:intergenic | 45.0% |
| GCTAAGCTTTCAGTTGGAGC+AGG | + | chr7.4:15495858-15495877 | None:intergenic | 50.0% | |
| GCTTTCAGTTGGAGCAGGAA+TGG | + | chr7.4:15495853-15495872 | None:intergenic | 50.0% | |
| GTACTACTTGGCAGAAGGGA+TGG | - | chr7.4:15495795-15495814 | MS.gene018002:intron | 50.0% | |
| TCAGCACAAGACACAACAGC+AGG | + | chr7.4:15495573-15495592 | None:intergenic | 50.0% | |
| TGGAGCAGGAATGGATGTGT+TGG | + | chr7.4:15495844-15495863 | None:intergenic | 50.0% | |
| ! | TGGATGTGTTGGCACCAGAT+TGG | + | chr7.4:15495833-15495852 | None:intergenic | 50.0% |
| GTTAGGCTCGCGGTAATACG+AGG | + | chr7.4:15495302-15495321 | None:intergenic | 55.0% | |
| TGCAGTCAGGAGGTCCTTCA+TGG | - | chr7.4:15495769-15495788 | MS.gene018002:intron | 55.0% | |
| !! | CTGAAGACGGGTTAGGCTCG+CGG | + | chr7.4:15495312-15495331 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.4 | gene | 15495143 | 15496702 | 15495143 | ID=MS.gene018002 |
| chr7.4 | mRNA | 15495143 | 15496702 | 15495143 | ID=MS.gene018002.t1;Parent=MS.gene018002 |
| chr7.4 | exon | 15496493 | 15496702 | 15496493 | ID=MS.gene018002.t1.exon1;Parent=MS.gene018002.t1 |
| chr7.4 | CDS | 15496493 | 15496702 | 15496493 | ID=cds.MS.gene018002.t1;Parent=MS.gene018002.t1 |
| chr7.4 | exon | 15496216 | 15496410 | 15496216 | ID=MS.gene018002.t1.exon2;Parent=MS.gene018002.t1 |
| chr7.4 | CDS | 15496216 | 15496410 | 15496216 | ID=cds.MS.gene018002.t1;Parent=MS.gene018002.t1 |
| chr7.4 | exon | 15495906 | 15496071 | 15495906 | ID=MS.gene018002.t1.exon3;Parent=MS.gene018002.t1 |
| chr7.4 | CDS | 15495906 | 15496071 | 15495906 | ID=cds.MS.gene018002.t1;Parent=MS.gene018002.t1 |
| chr7.4 | exon | 15495143 | 15495561 | 15495143 | ID=MS.gene018002.t1.exon4;Parent=MS.gene018002.t1 |
| chr7.4 | CDS | 15495143 | 15495561 | 15495143 | ID=cds.MS.gene018002.t1;Parent=MS.gene018002.t1 |
| Gene Sequence |
| Protein sequence |
