Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene37256.t1 | XP_013467682.1 | 97.3 | 259 | 7 | 0 | 14 | 272 | 70 | 328 | 3.50E-137 | 497.7 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene37256.t1 | Q42578 | 75.3 | 259 | 63 | 1 | 14 | 272 | 78 | 335 | 2.0e-104 | 380.2 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene37256.t1 | A0A072VI65 | 97.3 | 259 | 7 | 0 | 14 | 272 | 70 | 328 | 2.5e-137 | 497.7 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene37256 | MS.gene012254 | PPI |
MS.gene37256 | MS.gene026111 | PPI |
MS.gene37256 | MS.gene71395 | PPI |
MS.gene37256 | MS.gene006132 | PPI |
MS.gene37256 | MS.gene025145 | PPI |
MS.gene37256 | MS.gene60708 | PPI |
MS.gene37256 | MS.gene051996 | PPI |
MS.gene37256 | MS.gene001264 | PPI |
MS.gene37256 | MS.gene032194 | PPI |
MS.gene85260 | MS.gene37256 | PPI |
MS.gene006133 | MS.gene37256 | PPI |
MS.gene37256 | MS.gene85778 | PPI |
MS.gene37256 | MS.gene047667 | PPI |
MS.gene37256 | MS.gene041124 | PPI |
MS.gene37256 | MS.gene71393 | PPI |
MS.gene37256 | MS.gene61089 | PPI |
MS.gene37256 | MS.gene051844 | PPI |
MS.gene37256 | MS.gene051232 | PPI |
MS.gene37256 | MS.gene24862 | PPI |
MS.gene37256 | MS.gene012253 | PPI |
MS.gene37256 | MS.gene010392 | PPI |
MS.gene37256 | MS.gene041122 | PPI |
MS.gene37256 | MS.gene052951 | PPI |
MS.gene37256 | MS.gene047665 | PPI |
MS.gene37256 | MS.gene88899 | PPI |
MS.gene37256 | MS.gene010390 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene37256.t1 | MTR_1g054205 | 97.297 | 259 | 7 | 0 | 14 | 272 | 70 | 328 | 0.0 | 511 |
MS.gene37256.t1 | MTR_7g093370 | 80.695 | 259 | 50 | 0 | 14 | 272 | 115 | 373 | 3.97e-152 | 429 |
MS.gene37256.t1 | MTR_2g029820 | 59.922 | 257 | 102 | 1 | 14 | 270 | 75 | 330 | 1.07e-106 | 313 |
MS.gene37256.t1 | MTR_2g029830 | 59.922 | 257 | 102 | 1 | 14 | 270 | 6 | 261 | 2.28e-106 | 310 |
MS.gene37256.t1 | MTR_2g029830 | 60.078 | 258 | 102 | 1 | 13 | 270 | 73 | 329 | 5.43e-106 | 311 |
MS.gene37256.t1 | MTR_2g029815 | 59.922 | 257 | 102 | 1 | 14 | 270 | 75 | 330 | 3.70e-105 | 309 |
MS.gene37256.t1 | MTR_2g029800 | 58.527 | 258 | 106 | 1 | 13 | 270 | 74 | 330 | 5.64e-104 | 306 |
MS.gene37256.t1 | MTR_2g029860 | 60.853 | 258 | 100 | 1 | 14 | 271 | 75 | 331 | 1.36e-103 | 305 |
MS.gene37256.t1 | MTR_2g028980 | 59.533 | 257 | 103 | 1 | 14 | 270 | 75 | 330 | 8.04e-103 | 303 |
MS.gene37256.t1 | MTR_2g040000 | 58.462 | 260 | 102 | 2 | 14 | 270 | 75 | 331 | 1.17e-101 | 300 |
MS.gene37256.t1 | MTR_4g125940 | 58.301 | 259 | 103 | 2 | 14 | 270 | 19 | 274 | 2.08e-101 | 297 |
MS.gene37256.t1 | MTR_4g125940 | 58.301 | 259 | 103 | 2 | 14 | 270 | 74 | 329 | 7.99e-101 | 298 |
MS.gene37256.t1 | MTR_2g029750 | 57.588 | 257 | 108 | 1 | 14 | 270 | 75 | 330 | 3.81e-99 | 294 |
MS.gene37256.t1 | MTR_2g029740 | 57.588 | 257 | 108 | 1 | 14 | 270 | 75 | 330 | 5.11e-99 | 294 |
MS.gene37256.t1 | MTR_2g029850 | 60.078 | 258 | 102 | 1 | 14 | 271 | 75 | 331 | 6.03e-99 | 293 |
MS.gene37256.t1 | MTR_2g029560 | 55.039 | 258 | 115 | 1 | 14 | 271 | 70 | 326 | 5.28e-97 | 288 |
MS.gene37256.t1 | MTR_2g029730 | 55.814 | 258 | 113 | 1 | 14 | 271 | 71 | 327 | 3.44e-93 | 279 |
MS.gene37256.t1 | MTR_2g029910 | 57.364 | 258 | 108 | 2 | 14 | 270 | 76 | 332 | 9.26e-93 | 278 |
MS.gene37256.t1 | MTR_3g094650 | 53.077 | 260 | 108 | 5 | 14 | 270 | 74 | 322 | 7.38e-85 | 256 |
MS.gene37256.t1 | MTR_8g076820 | 50.973 | 257 | 124 | 2 | 14 | 270 | 76 | 330 | 2.30e-84 | 256 |
MS.gene37256.t1 | MTR_5g021060 | 49.805 | 257 | 127 | 2 | 14 | 270 | 76 | 330 | 2.31e-83 | 253 |
MS.gene37256.t1 | MTR_5g017860 | 50.775 | 258 | 122 | 4 | 14 | 270 | 73 | 326 | 1.63e-81 | 248 |
MS.gene37256.t1 | MTR_5g017850 | 51.163 | 258 | 121 | 4 | 14 | 270 | 73 | 326 | 1.81e-81 | 248 |
MS.gene37256.t1 | MTR_3g072190 | 49.416 | 257 | 120 | 3 | 14 | 270 | 5 | 251 | 4.02e-81 | 244 |
MS.gene37256.t1 | MTR_2g084080 | 50.195 | 257 | 118 | 3 | 14 | 270 | 71 | 317 | 1.01e-80 | 246 |
MS.gene37256.t1 | MTR_3g072190 | 49.416 | 257 | 120 | 3 | 14 | 270 | 72 | 318 | 2.21e-80 | 245 |
MS.gene37256.t1 | MTR_3g094670 | 53.462 | 260 | 107 | 5 | 14 | 270 | 74 | 322 | 2.22e-79 | 243 |
MS.gene37256.t1 | MTR_4g029200 | 48.638 | 257 | 122 | 3 | 14 | 270 | 92 | 338 | 1.98e-78 | 241 |
MS.gene37256.t1 | MTR_5g074970 | 49.808 | 261 | 117 | 5 | 14 | 270 | 76 | 326 | 2.22e-78 | 240 |
MS.gene37256.t1 | MTR_2g084020 | 48.638 | 257 | 123 | 3 | 14 | 270 | 71 | 318 | 3.85e-78 | 239 |
MS.gene37256.t1 | MTR_2g084110 | 49.027 | 257 | 121 | 3 | 14 | 270 | 71 | 317 | 3.99e-78 | 239 |
MS.gene37256.t1 | MTR_2g084010 | 48.638 | 257 | 123 | 3 | 14 | 270 | 71 | 318 | 3.72e-77 | 237 |
MS.gene37256.t1 | MTR_5g083860 | 48.846 | 260 | 119 | 5 | 14 | 270 | 77 | 325 | 3.91e-77 | 237 |
MS.gene37256.t1 | MTR_3g094630 | 52.308 | 260 | 110 | 5 | 14 | 270 | 74 | 322 | 4.72e-76 | 234 |
MS.gene37256.t1 | MTR_1g022970 | 47.471 | 257 | 134 | 1 | 14 | 270 | 92 | 347 | 7.92e-76 | 234 |
MS.gene37256.t1 | MTR_4g029170 | 48.263 | 259 | 122 | 5 | 14 | 270 | 73 | 321 | 9.58e-76 | 233 |
MS.gene37256.t1 | MTR_2g084000 | 48.450 | 258 | 122 | 4 | 14 | 270 | 72 | 319 | 1.33e-75 | 233 |
MS.gene37256.t1 | MTR_7g072510 | 46.304 | 257 | 128 | 3 | 14 | 270 | 66 | 312 | 1.74e-75 | 232 |
MS.gene37256.t1 | MTR_3g466200 | 48.077 | 260 | 122 | 6 | 14 | 270 | 71 | 320 | 2.81e-75 | 232 |
MS.gene37256.t1 | MTR_5g074860 | 46.154 | 260 | 128 | 5 | 14 | 270 | 75 | 325 | 6.72e-74 | 229 |
MS.gene37256.t1 | MTR_4g122640 | 47.471 | 257 | 131 | 3 | 14 | 270 | 84 | 336 | 2.75e-73 | 228 |
MS.gene37256.t1 | MTR_3g466180 | 48.638 | 257 | 122 | 3 | 14 | 270 | 77 | 323 | 2.98e-73 | 227 |
MS.gene37256.t1 | MTR_4g029190 | 47.860 | 257 | 126 | 4 | 14 | 270 | 92 | 340 | 4.91e-73 | 227 |
MS.gene37256.t1 | MTR_5g014100 | 46.183 | 262 | 136 | 3 | 13 | 270 | 71 | 331 | 2.77e-72 | 225 |
MS.gene37256.t1 | MTR_4g029180 | 46.332 | 259 | 127 | 5 | 14 | 270 | 73 | 321 | 5.13e-72 | 224 |
MS.gene37256.t1 | MTR_2g084090 | 46.899 | 258 | 126 | 4 | 14 | 270 | 71 | 318 | 8.16e-72 | 223 |
MS.gene37256.t1 | MTR_4g083710 | 46.923 | 260 | 127 | 4 | 14 | 270 | 73 | 324 | 8.37e-72 | 223 |
MS.gene37256.t1 | MTR_3g467600 | 45.385 | 260 | 131 | 4 | 14 | 270 | 73 | 324 | 1.58e-70 | 220 |
MS.gene37256.t1 | MTR_7g072480 | 44.747 | 257 | 132 | 3 | 14 | 270 | 70 | 316 | 1.74e-68 | 214 |
MS.gene37256.t1 | MTR_1g115900 | 45.594 | 261 | 128 | 6 | 14 | 271 | 73 | 322 | 2.12e-68 | 215 |
MS.gene37256.t1 | MTR_2g088770 | 43.243 | 259 | 140 | 5 | 14 | 270 | 72 | 325 | 4.69e-68 | 214 |
MS.gene37256.t1 | MTR_5g074740 | 44.615 | 260 | 132 | 5 | 14 | 270 | 71 | 321 | 4.74e-68 | 214 |
MS.gene37256.t1 | MTR_5g074760 | 44.615 | 260 | 132 | 5 | 14 | 270 | 71 | 321 | 8.05e-68 | 213 |
MS.gene37256.t1 | MTR_4g046713 | 43.023 | 258 | 142 | 4 | 14 | 270 | 73 | 326 | 8.69e-68 | 213 |
MS.gene37256.t1 | MTR_4g074995 | 46.538 | 260 | 115 | 5 | 14 | 270 | 70 | 308 | 2.14e-67 | 211 |
MS.gene37256.t1 | MTR_3g092990 | 42.963 | 270 | 148 | 4 | 3 | 270 | 50 | 315 | 6.51e-67 | 211 |
MS.gene37256.t1 | MTR_5g074710 | 43.846 | 260 | 134 | 5 | 14 | 270 | 71 | 321 | 6.35e-66 | 208 |
MS.gene37256.t1 | MTR_4g074990 | 45.385 | 260 | 115 | 4 | 14 | 270 | 70 | 305 | 1.28e-65 | 207 |
MS.gene37256.t1 | MTR_7g107520 | 44.358 | 257 | 136 | 5 | 14 | 270 | 71 | 320 | 2.25e-65 | 207 |
MS.gene37256.t1 | MTR_4g031140 | 41.085 | 258 | 146 | 4 | 14 | 271 | 74 | 325 | 2.46e-65 | 207 |
MS.gene37256.t1 | MTR_3g092990 | 43.243 | 259 | 141 | 4 | 14 | 270 | 72 | 326 | 3.52e-65 | 206 |
MS.gene37256.t1 | MTR_4g030890 | 41.634 | 257 | 144 | 4 | 14 | 270 | 146 | 396 | 4.15e-64 | 206 |
MS.gene37256.t1 | MTR_5g022870 | 43.023 | 258 | 136 | 8 | 14 | 270 | 69 | 316 | 6.72e-64 | 203 |
MS.gene37256.t1 | MTR_4g114210 | 42.366 | 262 | 138 | 5 | 14 | 270 | 67 | 320 | 9.87e-64 | 202 |
MS.gene37256.t1 | MTR_1g101830 | 42.248 | 258 | 140 | 6 | 14 | 270 | 73 | 322 | 1.15e-63 | 202 |
MS.gene37256.t1 | MTR_2g008710 | 43.295 | 261 | 136 | 5 | 14 | 270 | 73 | 325 | 1.71e-63 | 202 |
MS.gene37256.t1 | MTR_6g043280 | 45.560 | 259 | 126 | 7 | 14 | 270 | 87 | 332 | 7.07e-63 | 201 |
MS.gene37256.t1 | MTR_5g049280 | 41.762 | 261 | 146 | 6 | 14 | 270 | 79 | 337 | 7.09e-63 | 201 |
MS.gene37256.t1 | MTR_4g133800 | 43.411 | 258 | 134 | 6 | 14 | 270 | 87 | 333 | 1.55e-62 | 200 |
MS.gene37256.t1 | MTR_2g008730 | 44.082 | 245 | 129 | 4 | 30 | 270 | 61 | 301 | 6.16e-62 | 197 |
MS.gene37256.t1 | MTR_7g026990 | 42.248 | 258 | 138 | 4 | 14 | 271 | 77 | 323 | 6.93e-62 | 198 |
MS.gene37256.t1 | MTR_2g029880 | 51.777 | 197 | 85 | 2 | 74 | 270 | 2 | 188 | 3.12e-61 | 192 |
MS.gene37256.t1 | MTR_7g086820 | 41.245 | 257 | 141 | 6 | 14 | 270 | 66 | 312 | 2.93e-60 | 193 |
MS.gene37256.t1 | MTR_2g099175 | 40.458 | 262 | 143 | 6 | 14 | 270 | 82 | 335 | 4.41e-59 | 191 |
MS.gene37256.t1 | MTR_7g029030 | 41.473 | 258 | 142 | 4 | 14 | 270 | 71 | 320 | 9.83e-59 | 190 |
MS.gene37256.t1 | MTR_0155s0040 | 40.078 | 257 | 140 | 7 | 14 | 270 | 73 | 315 | 4.08e-58 | 188 |
MS.gene37256.t1 | MTR_6g027440 | 42.412 | 257 | 139 | 7 | 14 | 270 | 67 | 314 | 5.19e-58 | 188 |
MS.gene37256.t1 | MTR_8g075100 | 41.538 | 260 | 137 | 9 | 14 | 270 | 72 | 319 | 9.18e-58 | 187 |
MS.gene37256.t1 | MTR_1g009750 | 40.385 | 260 | 148 | 4 | 14 | 270 | 73 | 328 | 1.19e-57 | 187 |
MS.gene37256.t1 | MTR_4g074980 | 43.191 | 257 | 113 | 6 | 14 | 270 | 71 | 294 | 2.80e-57 | 185 |
MS.gene37256.t1 | MTR_5g074860 | 42.308 | 260 | 99 | 7 | 14 | 270 | 75 | 286 | 3.63e-57 | 184 |
MS.gene37256.t1 | MTR_1g077000 | 41.634 | 257 | 136 | 6 | 14 | 270 | 85 | 327 | 8.44e-57 | 185 |
MS.gene37256.t1 | MTR_2g437770 | 40.154 | 259 | 142 | 5 | 14 | 271 | 96 | 342 | 1.74e-56 | 184 |
MS.gene37256.t1 | MTR_4g127670 | 40.996 | 261 | 143 | 3 | 14 | 270 | 70 | 323 | 5.85e-56 | 182 |
MS.gene37256.t1 | MTR_2g067440 | 37.716 | 289 | 145 | 7 | 14 | 272 | 106 | 389 | 2.62e-55 | 183 |
MS.gene37256.t1 | MTR_6g043240 | 42.085 | 259 | 135 | 6 | 14 | 271 | 88 | 332 | 3.78e-55 | 181 |
MS.gene37256.t1 | MTR_4g087965 | 40.467 | 257 | 147 | 5 | 14 | 266 | 88 | 342 | 2.14e-54 | 179 |
MS.gene37256.t1 | MTR_2g077990 | 37.153 | 288 | 145 | 7 | 14 | 269 | 122 | 405 | 3.85e-54 | 180 |
MS.gene37256.t1 | MTR_1g090760 | 38.550 | 262 | 151 | 4 | 14 | 270 | 74 | 330 | 8.91e-54 | 177 |
MS.gene37256.t1 | MTR_2g078610 | 36.552 | 290 | 150 | 6 | 14 | 272 | 122 | 408 | 1.76e-53 | 179 |
MS.gene37256.t1 | MTR_1g025980 | 39.535 | 258 | 146 | 7 | 14 | 270 | 70 | 318 | 1.79e-53 | 176 |
MS.gene37256.t1 | MTR_4g095450 | 41.634 | 257 | 137 | 6 | 14 | 266 | 73 | 320 | 6.93e-53 | 175 |
MS.gene37256.t1 | MTR_2g067450 | 37.984 | 258 | 154 | 4 | 14 | 269 | 56 | 309 | 2.63e-51 | 170 |
MS.gene37256.t1 | MTR_4g074980 | 47.895 | 190 | 89 | 3 | 14 | 200 | 71 | 253 | 7.30e-51 | 167 |
MS.gene37256.t1 | MTR_5g016010 | 37.109 | 256 | 155 | 4 | 14 | 266 | 73 | 325 | 3.36e-50 | 168 |
MS.gene37256.t1 | MTR_1g038680 | 40.000 | 260 | 151 | 4 | 14 | 270 | 75 | 332 | 4.65e-50 | 167 |
MS.gene37256.t1 | MTR_3g072210 | 44.792 | 192 | 97 | 3 | 80 | 270 | 55 | 238 | 6.45e-50 | 164 |
MS.gene37256.t1 | MTR_8g062780 | 39.768 | 259 | 151 | 4 | 14 | 270 | 69 | 324 | 6.68e-50 | 167 |
MS.gene37256.t1 | MTR_7g086870 | 38.760 | 258 | 143 | 7 | 14 | 270 | 68 | 311 | 2.09e-49 | 166 |
MS.gene37256.t1 | MTR_6g043460 | 39.147 | 258 | 137 | 7 | 14 | 266 | 82 | 324 | 4.33e-49 | 166 |
MS.gene37256.t1 | MTR_2g008160 | 38.023 | 263 | 148 | 8 | 14 | 270 | 70 | 323 | 1.21e-48 | 164 |
MS.gene37256.t1 | MTR_1g066710 | 35.185 | 270 | 160 | 5 | 8 | 271 | 64 | 324 | 2.32e-48 | 163 |
MS.gene37256.t1 | MTR_1g009750 | 37.743 | 257 | 142 | 5 | 14 | 270 | 73 | 311 | 5.87e-48 | 162 |
MS.gene37256.t1 | MTR_0147s0010 | 37.849 | 251 | 133 | 4 | 39 | 269 | 134 | 381 | 1.05e-47 | 163 |
MS.gene37256.t1 | MTR_1g086320 | 37.500 | 264 | 152 | 7 | 14 | 270 | 76 | 333 | 1.34e-47 | 161 |
MS.gene37256.t1 | MTR_5g074700 | 38.362 | 232 | 118 | 5 | 42 | 270 | 5 | 214 | 2.17e-47 | 157 |
MS.gene37256.t1 | MTR_2g078280 | 36.727 | 275 | 138 | 7 | 14 | 256 | 122 | 392 | 2.59e-47 | 162 |
MS.gene37256.t1 | MTR_5g033470 | 36.122 | 263 | 160 | 5 | 13 | 270 | 118 | 377 | 7.79e-47 | 160 |
MS.gene37256.t1 | MTR_3g105790 | 39.615 | 260 | 146 | 5 | 14 | 270 | 71 | 322 | 2.11e-46 | 158 |
MS.gene37256.t1 | MTR_4g132110 | 34.317 | 271 | 161 | 6 | 3 | 266 | 64 | 324 | 3.20e-46 | 158 |
MS.gene37256.t1 | MTR_1g086490 | 36.803 | 269 | 154 | 7 | 14 | 270 | 76 | 340 | 1.81e-45 | 156 |
MS.gene37256.t1 | MTR_1g066680 | 35.294 | 272 | 161 | 7 | 6 | 271 | 61 | 323 | 4.36e-45 | 154 |
MS.gene37256.t1 | MTR_4g132110 | 35.145 | 276 | 157 | 8 | 3 | 266 | 64 | 329 | 4.73e-45 | 155 |
MS.gene37256.t1 | MTR_1g066380 | 35.769 | 260 | 155 | 6 | 15 | 271 | 6 | 256 | 7.10e-45 | 152 |
MS.gene37256.t1 | MTR_1g066380 | 35.556 | 270 | 159 | 7 | 8 | 271 | 64 | 324 | 1.12e-44 | 154 |
MS.gene37256.t1 | MTR_3g105790 | 38.645 | 251 | 144 | 4 | 23 | 270 | 3 | 246 | 1.35e-43 | 149 |
MS.gene37256.t1 | MTR_0286s0010 | 36.803 | 269 | 159 | 7 | 6 | 270 | 73 | 334 | 1.99e-43 | 150 |
MS.gene37256.t1 | MTR_6g008075 | 36.803 | 269 | 159 | 7 | 6 | 270 | 73 | 334 | 1.99e-43 | 150 |
MS.gene37256.t1 | MTR_1g066640 | 34.815 | 270 | 161 | 7 | 8 | 271 | 64 | 324 | 2.60e-43 | 150 |
MS.gene37256.t1 | MTR_4g132490 | 36.398 | 261 | 154 | 5 | 14 | 270 | 75 | 327 | 6.06e-42 | 146 |
MS.gene37256.t1 | MTR_7g072490 | 37.698 | 252 | 93 | 6 | 13 | 264 | 1 | 188 | 8.20e-37 | 130 |
MS.gene37256.t1 | MTR_2g077980 | 31.522 | 276 | 149 | 9 | 31 | 269 | 11 | 283 | 3.43e-35 | 128 |
MS.gene37256.t1 | MTR_2g078560 | 31.390 | 223 | 120 | 5 | 78 | 269 | 99 | 319 | 2.38e-31 | 119 |
MS.gene37256.t1 | MTR_2g008160 | 31.939 | 263 | 129 | 8 | 14 | 270 | 70 | 288 | 1.01e-30 | 116 |
MS.gene37256.t1 | MTR_5g058120 | 38.272 | 162 | 87 | 3 | 105 | 266 | 7 | 155 | 1.78e-27 | 107 |
MS.gene37256.t1 | MTR_7g086790 | 34.896 | 192 | 102 | 5 | 15 | 206 | 17 | 185 | 5.50e-25 | 99.0 |
MS.gene37256.t1 | MTR_2g008160 | 42.623 | 122 | 63 | 4 | 14 | 134 | 70 | 185 | 1.13e-22 | 92.8 |
MS.gene37256.t1 | MTR_4g031040 | 32.558 | 172 | 72 | 3 | 31 | 202 | 4 | 131 | 6.70e-20 | 83.6 |
MS.gene37256.t1 | MTR_5g074770 | 44.595 | 74 | 41 | 0 | 196 | 269 | 35 | 108 | 1.31e-17 | 76.6 |
MS.gene37256.t1 | MTR_3g462850 | 34.507 | 142 | 88 | 5 | 133 | 270 | 9 | 149 | 3.12e-17 | 77.0 |
MS.gene37256.t1 | MTR_3g072260 | 63.492 | 63 | 22 | 1 | 14 | 76 | 72 | 133 | 3.79e-16 | 73.9 |
MS.gene37256.t1 | MTR_1g098320 | 44.444 | 72 | 38 | 1 | 195 | 266 | 51 | 120 | 9.89e-15 | 70.1 |
MS.gene37256.t1 | MTR_7g107500 | 45.238 | 84 | 43 | 2 | 187 | 270 | 17 | 97 | 9.13e-14 | 66.2 |
MS.gene37256.t1 | MTR_6g048160 | 53.846 | 65 | 25 | 2 | 14 | 78 | 29 | 88 | 4.54e-13 | 63.9 |
MS.gene37256.t1 | MTR_7g086785 | 46.575 | 73 | 37 | 2 | 14 | 86 | 4 | 74 | 4.52e-12 | 62.8 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene37256.t1 | AT5G06720 | 75.290 | 259 | 63 | 1 | 14 | 272 | 78 | 335 | 2.97e-137 | 390 |
MS.gene37256.t1 | AT5G06730 | 70.155 | 258 | 76 | 1 | 14 | 271 | 79 | 335 | 2.41e-126 | 363 |
MS.gene37256.t1 | AT2G38380 | 56.589 | 258 | 110 | 2 | 14 | 270 | 77 | 333 | 1.15e-100 | 298 |
MS.gene37256.t1 | AT2G38390 | 55.039 | 258 | 114 | 2 | 14 | 270 | 77 | 333 | 5.50e-99 | 293 |
MS.gene37256.t1 | AT5G19880 | 55.212 | 259 | 114 | 2 | 14 | 270 | 71 | 329 | 9.32e-97 | 287 |
MS.gene37256.t1 | AT3G32980 | 54.440 | 259 | 115 | 3 | 14 | 270 | 77 | 334 | 1.17e-95 | 285 |
MS.gene37256.t1 | AT5G19890 | 56.757 | 259 | 103 | 4 | 14 | 270 | 76 | 327 | 1.26e-95 | 284 |
MS.gene37256.t1 | AT3G49110 | 53.282 | 259 | 118 | 3 | 14 | 270 | 79 | 336 | 5.44e-93 | 278 |
MS.gene37256.t1 | AT3G49120 | 53.282 | 259 | 118 | 3 | 14 | 270 | 78 | 335 | 4.75e-92 | 276 |
MS.gene37256.t1 | AT4G08770 | 51.737 | 259 | 122 | 3 | 14 | 270 | 70 | 327 | 7.91e-92 | 275 |
MS.gene37256.t1 | AT2G18150 | 52.510 | 259 | 121 | 2 | 14 | 272 | 82 | 338 | 2.60e-90 | 271 |
MS.gene37256.t1 | AT4G36430 | 52.529 | 257 | 120 | 2 | 14 | 270 | 76 | 330 | 1.51e-89 | 269 |
MS.gene37256.t1 | AT2G18140 | 52.124 | 259 | 122 | 2 | 14 | 272 | 81 | 337 | 4.64e-89 | 268 |
MS.gene37256.t1 | AT4G08780 | 49.807 | 259 | 127 | 3 | 14 | 270 | 70 | 327 | 5.27e-89 | 268 |
MS.gene37256.t1 | AT5G66390 | 52.140 | 257 | 121 | 2 | 14 | 270 | 79 | 333 | 8.83e-89 | 267 |
MS.gene37256.t1 | AT3G50990 | 51.362 | 257 | 123 | 2 | 14 | 270 | 87 | 341 | 3.96e-86 | 261 |
MS.gene37256.t1 | AT5G05340 | 53.077 | 260 | 108 | 5 | 14 | 270 | 76 | 324 | 2.69e-85 | 258 |
MS.gene37256.t1 | AT1G44970 | 50.195 | 257 | 127 | 1 | 14 | 270 | 91 | 346 | 1.19e-79 | 244 |
MS.gene37256.t1 | AT1G49570 | 49.219 | 256 | 124 | 4 | 14 | 266 | 94 | 346 | 5.35e-79 | 243 |
MS.gene37256.t1 | AT5G58390 | 47.692 | 260 | 123 | 6 | 14 | 270 | 67 | 316 | 2.93e-74 | 229 |
MS.gene37256.t1 | AT2G35380 | 48.092 | 262 | 131 | 4 | 13 | 270 | 75 | 335 | 1.82e-72 | 226 |
MS.gene37256.t1 | AT1G14550 | 46.124 | 258 | 130 | 4 | 14 | 270 | 72 | 321 | 3.14e-71 | 222 |
MS.gene37256.t1 | AT5G58400 | 47.126 | 261 | 123 | 6 | 14 | 270 | 76 | 325 | 1.99e-68 | 215 |
MS.gene37256.t1 | AT1G68850 | 43.511 | 262 | 141 | 7 | 14 | 270 | 76 | 335 | 5.69e-68 | 214 |
MS.gene37256.t1 | AT2G22420 | 42.412 | 257 | 142 | 4 | 14 | 270 | 69 | 319 | 6.72e-68 | 214 |
MS.gene37256.t1 | AT5G39580 | 49.225 | 258 | 121 | 7 | 14 | 270 | 71 | 319 | 1.13e-67 | 213 |
MS.gene37256.t1 | AT4G16270 | 45.349 | 258 | 135 | 5 | 14 | 270 | 96 | 348 | 1.48e-67 | 213 |
MS.gene37256.t1 | AT2G35380 | 47.347 | 245 | 125 | 3 | 30 | 270 | 3 | 247 | 1.13e-66 | 208 |
MS.gene37256.t1 | AT1G05260 | 42.308 | 260 | 141 | 6 | 14 | 270 | 72 | 325 | 2.09e-66 | 209 |
MS.gene37256.t1 | AT5G64120 | 46.304 | 257 | 129 | 6 | 14 | 270 | 81 | 328 | 2.10e-66 | 210 |
MS.gene37256.t1 | AT3G01190 | 41.634 | 257 | 143 | 5 | 14 | 270 | 72 | 321 | 2.11e-66 | 209 |
MS.gene37256.t1 | AT1G14540 | 43.969 | 257 | 136 | 3 | 14 | 270 | 67 | 315 | 4.35e-66 | 208 |
MS.gene37256.t1 | AT4G11290 | 42.857 | 259 | 143 | 4 | 14 | 270 | 71 | 326 | 1.56e-65 | 207 |
MS.gene37256.t1 | AT5G15180 | 39.300 | 257 | 151 | 4 | 14 | 270 | 78 | 329 | 9.75e-64 | 203 |
MS.gene37256.t1 | AT2G41480 | 43.130 | 262 | 136 | 6 | 14 | 270 | 75 | 328 | 8.48e-63 | 201 |
MS.gene37256.t1 | AT5G17820 | 41.634 | 257 | 137 | 5 | 14 | 270 | 70 | 313 | 2.07e-62 | 199 |
MS.gene37256.t1 | AT3G03670 | 42.412 | 257 | 144 | 3 | 14 | 270 | 69 | 321 | 1.56e-61 | 197 |
MS.gene37256.t1 | AT5G17820 | 41.634 | 257 | 137 | 5 | 14 | 270 | 123 | 366 | 1.86e-61 | 198 |
MS.gene37256.t1 | AT5G14130 | 42.248 | 258 | 143 | 4 | 14 | 270 | 78 | 330 | 9.34e-61 | 195 |
MS.gene37256.t1 | AT2G18980 | 44.061 | 261 | 134 | 5 | 14 | 270 | 71 | 323 | 1.08e-60 | 195 |
MS.gene37256.t1 | AT5G14130 | 42.248 | 258 | 143 | 4 | 14 | 270 | 119 | 371 | 2.36e-60 | 196 |
MS.gene37256.t1 | AT5G51890 | 40.698 | 258 | 145 | 6 | 14 | 270 | 72 | 322 | 3.24e-60 | 194 |
MS.gene37256.t1 | AT4G30170 | 42.692 | 260 | 139 | 4 | 14 | 270 | 73 | 325 | 7.03e-60 | 193 |
MS.gene37256.t1 | AT3G21770 | 41.016 | 256 | 142 | 6 | 14 | 266 | 75 | 324 | 8.01e-60 | 193 |
MS.gene37256.t1 | AT5G24070 | 41.455 | 275 | 147 | 7 | 2 | 271 | 71 | 336 | 1.70e-59 | 192 |
MS.gene37256.t1 | AT5G64110 | 43.462 | 260 | 135 | 6 | 14 | 270 | 80 | 330 | 2.81e-59 | 191 |
MS.gene37256.t1 | AT1G05240 | 39.062 | 256 | 147 | 6 | 14 | 266 | 72 | 321 | 4.25e-58 | 188 |
MS.gene37256.t1 | AT1G05250 | 39.062 | 256 | 147 | 6 | 14 | 266 | 72 | 321 | 4.25e-58 | 188 |
MS.gene37256.t1 | AT1G71695 | 42.085 | 259 | 139 | 6 | 14 | 270 | 90 | 339 | 1.90e-57 | 187 |
MS.gene37256.t1 | AT2G39040 | 42.586 | 263 | 141 | 6 | 14 | 270 | 92 | 350 | 1.92e-57 | 187 |
MS.gene37256.t1 | AT2G43480 | 39.051 | 274 | 153 | 7 | 2 | 270 | 71 | 335 | 2.46e-57 | 187 |
MS.gene37256.t1 | AT4G25980 | 38.931 | 262 | 148 | 5 | 14 | 270 | 72 | 326 | 3.84e-56 | 183 |
MS.gene37256.t1 | AT5G42180 | 39.300 | 257 | 146 | 7 | 14 | 269 | 69 | 316 | 1.18e-54 | 179 |
MS.gene37256.t1 | AT3G49960 | 40.769 | 260 | 148 | 5 | 14 | 270 | 73 | 329 | 4.39e-54 | 178 |
MS.gene37256.t1 | AT4G33870 | 35.739 | 291 | 146 | 6 | 14 | 268 | 114 | 399 | 7.58e-54 | 179 |
MS.gene37256.t1 | AT4G37530 | 39.231 | 260 | 152 | 4 | 14 | 270 | 73 | 329 | 1.05e-53 | 177 |
MS.gene37256.t1 | AT4G33420 | 39.623 | 265 | 143 | 7 | 9 | 270 | 75 | 325 | 2.04e-53 | 176 |
MS.gene37256.t1 | AT5G64100 | 38.760 | 258 | 148 | 6 | 14 | 270 | 83 | 331 | 3.55e-53 | 176 |
MS.gene37256.t1 | AT1G30870 | 39.231 | 260 | 144 | 6 | 14 | 270 | 97 | 345 | 4.22e-53 | 176 |
MS.gene37256.t1 | AT4G37520 | 38.462 | 260 | 154 | 4 | 14 | 270 | 73 | 329 | 5.77e-53 | 175 |
MS.gene37256.t1 | AT4G33420 | 39.623 | 265 | 143 | 7 | 9 | 270 | 122 | 372 | 1.00e-52 | 176 |
MS.gene37256.t1 | AT5G67400 | 40.234 | 256 | 147 | 5 | 14 | 266 | 73 | 325 | 8.69e-52 | 172 |
MS.gene37256.t1 | AT4G37520 | 37.692 | 260 | 153 | 5 | 14 | 270 | 73 | 326 | 5.24e-50 | 167 |
MS.gene37256.t1 | AT2G34060 | 37.452 | 259 | 154 | 6 | 14 | 267 | 88 | 343 | 1.36e-49 | 167 |
MS.gene37256.t1 | AT4G17690 | 38.462 | 260 | 148 | 6 | 14 | 270 | 72 | 322 | 1.51e-48 | 164 |
MS.gene37256.t1 | AT4G21960 | 34.926 | 272 | 158 | 6 | 3 | 266 | 63 | 323 | 1.83e-48 | 164 |
MS.gene37256.t1 | AT1G77100 | 39.464 | 261 | 143 | 7 | 14 | 270 | 70 | 319 | 8.20e-48 | 162 |
MS.gene37256.t1 | AT5G22410 | 37.452 | 259 | 147 | 10 | 14 | 267 | 74 | 322 | 1.08e-47 | 162 |
MS.gene37256.t1 | AT4G26010 | 37.209 | 258 | 145 | 7 | 14 | 270 | 68 | 309 | 1.09e-46 | 158 |
MS.gene37256.t1 | AT4G26010 | 37.209 | 258 | 145 | 7 | 14 | 270 | 96 | 337 | 1.67e-46 | 159 |
MS.gene37256.t1 | AT5G47000 | 36.538 | 260 | 154 | 6 | 14 | 270 | 79 | 330 | 8.44e-46 | 157 |
MS.gene37256.t1 | AT2G24800 | 36.823 | 277 | 159 | 7 | 2 | 270 | 61 | 329 | 1.08e-45 | 156 |
MS.gene37256.t1 | AT1G24110 | 36.923 | 260 | 156 | 6 | 14 | 270 | 68 | 322 | 2.42e-45 | 155 |
MS.gene37256.t1 | AT4G31760 | 36.538 | 260 | 154 | 5 | 14 | 270 | 75 | 326 | 2.48e-45 | 155 |
MS.gene37256.t1 | AT2G37130 | 34.191 | 272 | 163 | 6 | 6 | 270 | 34 | 296 | 9.45e-45 | 153 |
MS.gene37256.t1 | AT4G37530 | 39.904 | 208 | 121 | 3 | 14 | 218 | 73 | 279 | 9.50e-45 | 152 |
MS.gene37256.t1 | AT2G37130 | 34.191 | 272 | 163 | 6 | 6 | 270 | 65 | 327 | 1.98e-44 | 153 |
MS.gene37256.t1 | AT1G34510 | 35.659 | 258 | 149 | 7 | 14 | 270 | 68 | 309 | 2.36e-44 | 152 |
MS.gene37256.t1 | AT5G40150 | 34.749 | 259 | 159 | 5 | 14 | 270 | 78 | 328 | 6.56e-42 | 146 |
MS.gene37256.t1 | AT3G28200 | 32.184 | 261 | 162 | 6 | 14 | 270 | 67 | 316 | 4.54e-39 | 139 |
MS.gene37256.t1 | AT3G17070 | 32.308 | 260 | 171 | 4 | 13 | 270 | 20 | 276 | 7.15e-33 | 121 |
MS.gene37256.t1 | AT3G17070 | 31.365 | 271 | 181 | 4 | 2 | 270 | 72 | 339 | 2.90e-32 | 121 |
MS.gene37256.t1 | AT5G39580 | 51.515 | 132 | 58 | 4 | 14 | 145 | 71 | 196 | 1.28e-30 | 114 |
MS.gene37256.t1 | AT4G25980 | 43.200 | 125 | 66 | 3 | 14 | 138 | 117 | 236 | 7.06e-25 | 100 |
MS.gene37256.t1 | AT2G24800 | 35.461 | 141 | 82 | 3 | 2 | 138 | 61 | 196 | 1.71e-16 | 77.0 |
MS.gene37256.t1 | AT1G77490 | 29.500 | 200 | 107 | 8 | 62 | 252 | 165 | 339 | 1.31e-14 | 73.6 |
MS.gene37256.t1 | AT1G77490 | 29.500 | 200 | 107 | 8 | 62 | 252 | 165 | 339 | 1.62e-14 | 73.2 |
MS.gene37256.t1 | AT3G42570 | 40.000 | 80 | 46 | 1 | 41 | 120 | 53 | 130 | 1.09e-11 | 62.0 |
Find 58 sgRNAs with CRISPR-Local
Find 137 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AAGTAGATCCGTTTCCATTT+TGG | 0.152829 | 1.2:-40373113 | None:intergenic |
CACCAATCTTCTAACCAAAA+TGG | 0.186383 | 1.2:+40373185 | MS.gene37256:CDS |
TGCTCAATCAATGATCAATA+TGG | 0.245564 | 1.2:+40373311 | MS.gene37256:CDS |
CGTTTGGAGAAGACCCATTT+TGG | 0.266541 | 1.2:-40373199 | None:intergenic |
TTGCTAAATAGGTTGTGTTT+AGG | 0.275276 | 1.2:-40373071 | None:intergenic |
CACTGAAGTTGAATAGTCTT+TGG | 0.281803 | 1.2:-40373026 | None:intergenic |
TGATCATTGATTGAGCAAAT+TGG | 0.294809 | 1.2:-40373305 | None:intergenic |
GTTGTGTTTAGGGTTGGATC+TGG | 0.301999 | 1.2:-40373060 | None:intergenic |
TGCTAAATAGGTTGTGTTTA+GGG | 0.307122 | 1.2:-40373070 | None:intergenic |
TTGTTGAAGTGTTGCTAAAT+AGG | 0.319158 | 1.2:-40373082 | None:intergenic |
CAACAAAATTGTCCCCAAAA+TGG | 0.326346 | 1.2:+40373099 | MS.gene37256:CDS |
TAACCTTGACACTACTGATA+TGG | 0.329060 | 1.2:+40371313 | MS.gene37256:CDS |
TTTATAGGTGCACACACATT+TGG | 0.358621 | 1.2:+40372979 | MS.gene37256:intron |
CCACGAATGGAATTAACATT+TGG | 0.362905 | 1.2:-40370943 | None:intergenic |
CTACAATCTGATTCACGAAT+TGG | 0.365865 | 1.2:+40370694 | MS.gene37256:CDS |
GTTAATTCCATTCGTGGATT+CGG | 0.390117 | 1.2:+40370949 | MS.gene37256:CDS |
CCAAATGTTAATTCCATTCG+TGG | 0.404259 | 1.2:+40370943 | MS.gene37256:CDS |
GCTATTAACAATTGAGATAG+TGG | 0.405538 | 1.2:-40373253 | None:intergenic |
TCTCCTTGAGTACCCGTTAA+GGG | 0.417333 | 1.2:-40373345 | None:intergenic |
TTCTCCTTGAGTACCCGTTA+AGG | 0.418744 | 1.2:-40373346 | None:intergenic |
ACTGAAGTTGAATAGTCTTT+GGG | 0.419409 | 1.2:-40373025 | None:intergenic |
CTATTCAACTTCAGTGGTAC+TGG | 0.423548 | 1.2:+40373033 | MS.gene37256:CDS |
ACCAATCTTCTAACCAAAAT+GGG | 0.423614 | 1.2:+40373186 | MS.gene37256:CDS |
GGGTAATATTAGCCCCTTAA+CGG | 0.428612 | 1.2:+40373332 | MS.gene37256:CDS |
TTTGTGTGATGTTTCCTCCT+TGG | 0.431614 | 1.2:-40370903 | None:intergenic |
ACTGATATGGTTGCATTGTC+AGG | 0.437074 | 1.2:+40371326 | MS.gene37256:CDS |
TTGTGTTTAGGGTTGGATCT+GGG | 0.444167 | 1.2:-40373059 | None:intergenic |
TCGAATGTGTCTCGAGTTGA+TGG | 0.447568 | 1.2:-40373150 | None:intergenic |
AAATAGGTTGTGTTTAGGGT+TGG | 0.456087 | 1.2:-40373066 | None:intergenic |
CCTTCATGGAATGTACTACT+TGG | 0.463746 | 1.2:+40371191 | MS.gene37256:CDS |
GGTAATATTAGCCCCTTAAC+GGG | 0.465814 | 1.2:+40373333 | MS.gene37256:CDS |
GCTCAATCAATGATCAATAT+GGG | 0.468721 | 1.2:+40373312 | MS.gene37256:CDS |
AGCAGAATCTTCTGTGTCCT+TGG | 0.471737 | 1.2:+40371050 | MS.gene37256:CDS |
ATTGACTGTAAGAAAGTCAA+TGG | 0.483590 | 1.2:+40373375 | MS.gene37256:CDS |
TCTCTTGAAAGTTCATGCTC+TGG | 0.512392 | 1.2:+40370994 | MS.gene37256:CDS |
TGAGATAGTGGAAGAACCAT+TGG | 0.524139 | 1.2:-40373241 | None:intergenic |
GCTCTCAAATGGAGAGGGAA+TGG | 0.524931 | 1.2:-40371258 | None:intergenic |
CACAGAAGATTCTGCTGCAA+GGG | 0.531206 | 1.2:-40371043 | None:intergenic |
CAAAATGGGTCTTCTCCAAA+CGG | 0.536674 | 1.2:+40373200 | MS.gene37256:CDS |
ACATTGGCTAGGCTCTCAAA+TGG | 0.539156 | 1.2:-40371269 | None:intergenic |
GATGGTTTAACAGCAAATCA+AGG | 0.542662 | 1.2:+40371221 | MS.gene37256:CDS |
GTACTACTTGGAAGAAGAGA+TGG | 0.542903 | 1.2:+40371203 | MS.gene37256:CDS |
CTCCTTGAGTACCCGTTAAG+GGG | 0.548987 | 1.2:-40373344 | None:intergenic |
AATTGTCCCCAAAATGGAAA+CGG | 0.549402 | 1.2:+40373105 | MS.gene37256:CDS |
ATTTAGATGTAACATTGGCT+AGG | 0.563686 | 1.2:-40371280 | None:intergenic |
AGCCCCTTAACGGGTACTCA+AGG | 0.575325 | 1.2:+40373342 | MS.gene37256:CDS |
AGAGAATTTAGATGTAACAT+TGG | 0.578600 | 1.2:-40371285 | None:intergenic |
ACACAGAAGATTCTGCTGCA+AGG | 0.581239 | 1.2:-40371044 | None:intergenic |
AACCACACCGAATCCACGAA+TGG | 0.596214 | 1.2:-40370956 | None:intergenic |
CCAAGTAGTACATTCCATGA+AGG | 0.596279 | 1.2:-40371191 | None:intergenic |
TTCCATTCGTGGATTCGGTG+TGG | 0.600076 | 1.2:+40370954 | MS.gene37256:CDS |
CAAAGACTATTCAACTTCAG+TGG | 0.603781 | 1.2:+40373027 | MS.gene37256:CDS |
GGCTAGGCTCTCAAATGGAG+AGG | 0.610190 | 1.2:-40371264 | None:intergenic |
CAACCATATCAGTAGTGTCA+AGG | 0.611707 | 1.2:-40371316 | None:intergenic |
GCTAGGCTCTCAAATGGAGA+GGG | 0.615063 | 1.2:-40371263 | None:intergenic |
CGAATGTGTCTCGAGTTGAT+GGG | 0.637579 | 1.2:-40373149 | None:intergenic |
GAGTGAAAATTGCAGTCAGG+GGG | 0.672593 | 1.2:+40371167 | MS.gene37256:intron |
GGTTTAACAGCAAATCAAGG+TGG | 0.762041 | 1.2:+40371224 | MS.gene37256:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TGTTAATTATTTCATTTATT+TGG | + | chr1.2:40371123-40371142 | MS.gene37256:intron | 10.0% |
!!! | ACAAAATTTAACTTAAAATT+AGG | + | chr1.2:40372243-40372262 | MS.gene37256:intron | 10.0% |
!!! | ATTTTAAATCATTGTAATTT+AGG | + | chr1.2:40371524-40371543 | MS.gene37256:intron | 10.0% |
!!! | CAAAATTTAACTTAAAATTA+GGG | + | chr1.2:40372244-40372263 | MS.gene37256:intron | 10.0% |
!!! | TTTTCTATTTAATCTTTAAA+TGG | + | chr1.2:40371377-40371396 | MS.gene37256:intron | 10.0% |
!! | TAATGATTAATTGAAATGTA+TGG | + | chr1.2:40372954-40372973 | MS.gene37256:intron | 15.0% |
!!! | AAACTTTTTAGAGTTAAATA+TGG | - | chr1.2:40372368-40372387 | None:intergenic | 15.0% |
!!! | ATATGAATTTACTTTAAAAG+AGG | - | chr1.2:40371954-40371973 | None:intergenic | 15.0% |
!!! | GAACAATTTTAAGTAATAAT+TGG | - | chr1.2:40371492-40371511 | None:intergenic | 15.0% |
!!! | GATATAATTTTAAAATCTCA+TGG | - | chr1.2:40371424-40371443 | None:intergenic | 15.0% |
!!! | TAGTGATTGAAAATTTTATA+GGG | + | chr1.2:40372275-40372294 | MS.gene37256:intron | 15.0% |
!!! | TATGAATTTACTTTAAAAGA+GGG | - | chr1.2:40371953-40371972 | None:intergenic | 15.0% |
!! | AAATTTCAAAGTAATTACCA+AGG | - | chr1.2:40371070-40371089 | None:intergenic | 20.0% |
!! | AATCATTTGTCTTTACTTAT+AGG | - | chr1.2:40372648-40372667 | None:intergenic | 20.0% |
!! | ACATATAGTTAGAAAATTAG+AGG | - | chr1.2:40371106-40371125 | None:intergenic | 20.0% |
!! | AGAAAGATTGGTATATTTAT+CGG | + | chr1.2:40372334-40372353 | MS.gene37256:intron | 20.0% |
!! | ATAAATCGTATTTGTTCATT+AGG | + | chr1.2:40370855-40370874 | MS.gene37256:intron | 20.0% |
!! | CATATAGTTAGAAAATTAGA+GGG | - | chr1.2:40371105-40371124 | None:intergenic | 20.0% |
!! | TAAATCGTATTTGTTCATTA+GGG | + | chr1.2:40370856-40370875 | MS.gene37256:intron | 20.0% |
!! | TTGAAATGTATGGAATTTAT+AGG | + | chr1.2:40372964-40372983 | MS.gene37256:intron | 20.0% |
!!! | AAATTTTCAATCACTACTTT+TGG | - | chr1.2:40372271-40372290 | None:intergenic | 20.0% |
!!! | CATGTTTAACTCTAAAAATA+TGG | + | chr1.2:40372471-40372490 | MS.gene37256:intron | 20.0% |
!!! | GAAAAGTTGACATATTTTTA+GGG | - | chr1.2:40371862-40371881 | None:intergenic | 20.0% |
!!! | GTAGTGATTGAAAATTTTAT+AGG | + | chr1.2:40372274-40372293 | MS.gene37256:intron | 20.0% |
!!! | TCCATTTTTTGTAAAAAGTT+GGG | + | chr1.2:40371819-40371838 | MS.gene37256:intron | 20.0% |
!!! | TGAAAAGTTGACATATTTTT+AGG | - | chr1.2:40371863-40371882 | None:intergenic | 20.0% |
!!! | TTCCATTTTTTGTAAAAAGT+TGG | + | chr1.2:40371818-40371837 | MS.gene37256:intron | 20.0% |
! | AAATCGTATTTGTTCATTAG+GGG | + | chr1.2:40370857-40370876 | MS.gene37256:intron | 25.0% |
! | AGAACATGTATTCAAAAGTA+GGG | + | chr1.2:40371720-40371739 | MS.gene37256:intron | 25.0% |
! | AGAGAATTTAGATGTAACAT+TGG | - | chr1.2:40371288-40371307 | None:intergenic | 25.0% |
! | ATCAAATCATGAGTCAATAT+GGG | - | chr1.2:40371644-40371663 | None:intergenic | 25.0% |
! | ATTGGTTAAAAAATGCTGTT+TGG | - | chr1.2:40373290-40373309 | None:intergenic | 25.0% |
! | GAAAGATTGGTATATTTATC+GGG | + | chr1.2:40372335-40372354 | MS.gene37256:intron | 25.0% |
! | TAGAACATGTATTCAAAAGT+AGG | + | chr1.2:40371719-40371738 | MS.gene37256:intron | 25.0% |
! | TATATTAGAACTAGTCAACT+AGG | - | chr1.2:40372902-40372921 | None:intergenic | 25.0% |
!! | ACCCAACTTTTTACAAAAAA+TGG | - | chr1.2:40371823-40371842 | None:intergenic | 25.0% |
!! | AGTTGGGTTAAATATGTTTT+TGG | + | chr1.2:40371835-40371854 | MS.gene37256:intron | 25.0% |
!! | GTCACTATTTTCATTTTAGA+AGG | + | chr1.2:40371774-40371793 | MS.gene37256:intron | 25.0% |
!! | TTGAAAACTCGTAATTTTGT+AGG | + | chr1.2:40372439-40372458 | MS.gene37256:intron | 25.0% |
!!! | ATTTTAGAAGGACTATTTTG+GGG | + | chr1.2:40371786-40371805 | MS.gene37256:intron | 25.0% |
!!! | CATTTTAGAAGGACTATTTT+GGG | + | chr1.2:40371785-40371804 | MS.gene37256:intron | 25.0% |
!!! | TCATTTTAGAAGGACTATTT+TGG | + | chr1.2:40371784-40371803 | MS.gene37256:intron | 25.0% |
AAGAACCATTGGTAGAAAAA+AGG | - | chr1.2:40373233-40373252 | None:intergenic | 30.0% | |
ACCAATCTTCTAACCAAAAT+GGG | + | chr1.2:40373186-40373205 | MS.gene37256:CDS | 30.0% | |
ACTGAAGTTGAATAGTCTTT+GGG | - | chr1.2:40373028-40373047 | None:intergenic | 30.0% | |
ATCACATTAGTCAGTTTGAA+TGG | + | chr1.2:40371465-40371484 | MS.gene37256:intron | 30.0% | |
ATTCAAACTGACTAATGTGA+TGG | - | chr1.2:40371466-40371485 | None:intergenic | 30.0% | |
ATTGACTGTAAGAAAGTCAA+TGG | + | chr1.2:40373375-40373394 | MS.gene37256:CDS | 30.0% | |
CAAAGCAATCATGAAAATGA+AGG | - | chr1.2:40370735-40370754 | None:intergenic | 30.0% | |
CATCAAATCATGAGTCAATA+TGG | - | chr1.2:40371645-40371664 | None:intergenic | 30.0% | |
GAGAGACTAAAAAGAAAGAT+TGG | + | chr1.2:40372322-40372341 | MS.gene37256:intron | 30.0% | |
GCTATTAACAATTGAGATAG+TGG | - | chr1.2:40373256-40373275 | None:intergenic | 30.0% | |
GCTCAATCAATGATCAATAT+GGG | + | chr1.2:40373312-40373331 | MS.gene37256:CDS | 30.0% | |
TCATCTAATAATAGAGCATG+TGG | + | chr1.2:40371680-40371699 | MS.gene37256:intron | 30.0% | |
TGCTAAATAGGTTGTGTTTA+GGG | - | chr1.2:40373073-40373092 | None:intergenic | 30.0% | |
TGCTCAATCAATGATCAATA+TGG | + | chr1.2:40373311-40373330 | MS.gene37256:CDS | 30.0% | |
TTGCTAAATAGGTTGTGTTT+AGG | - | chr1.2:40373074-40373093 | None:intergenic | 30.0% | |
! | AAAAAATGCTGTTTGGTTGT+TGG | - | chr1.2:40373283-40373302 | None:intergenic | 30.0% |
! | AAGTGAAGATGACAAACTTT+TGG | - | chr1.2:40371925-40371944 | None:intergenic | 30.0% |
! | AGTGAAGATGACAAACTTTT+GGG | - | chr1.2:40371924-40371943 | None:intergenic | 30.0% |
! | ATAGTCTTTGGGAGAAAAAT+TGG | - | chr1.2:40373017-40373036 | None:intergenic | 30.0% |
! | ATTTAGATGTAACATTGGCT+AGG | - | chr1.2:40371283-40371302 | None:intergenic | 30.0% |
! | CATGCACTGTTTTGTAATTT+CGG | + | chr1.2:40372501-40372520 | MS.gene37256:intron | 30.0% |
! | TGATCATTGATTGAGCAAAT+TGG | - | chr1.2:40373308-40373327 | None:intergenic | 30.0% |
! | TGTCGATTGAAATTTAGACA+TGG | + | chr1.2:40371614-40371633 | MS.gene37256:intron | 30.0% |
!! | TTGTTGAAGTGTTGCTAAAT+AGG | - | chr1.2:40373085-40373104 | None:intergenic | 30.0% |
!! | TTTTAGAAGGACTATTTTGG+GGG | + | chr1.2:40371787-40371806 | MS.gene37256:intron | 30.0% |
!!! | TAATCAAAGTTTTGAAAGCG+AGG | - | chr1.2:40372575-40372594 | None:intergenic | 30.0% |
AAGAGTGAAAATTGCAGTCA+GGG | + | chr1.2:40371165-40371184 | MS.gene37256:intron | 35.0% | |
AATTGTCCCCAAAATGGAAA+CGG | + | chr1.2:40373105-40373124 | MS.gene37256:CDS | 35.0% | |
CAAAGACTATTCAACTTCAG+TGG | + | chr1.2:40373027-40373046 | MS.gene37256:CDS | 35.0% | |
CAACAAAATTGTCCCCAAAA+TGG | + | chr1.2:40373099-40373118 | MS.gene37256:CDS | 35.0% | |
CACCAATCTTCTAACCAAAA+TGG | + | chr1.2:40373185-40373204 | MS.gene37256:CDS | 35.0% | |
CACTGAAGTTGAATAGTCTT+TGG | - | chr1.2:40373029-40373048 | None:intergenic | 35.0% | |
CCAAATGTTAATTCCATTCG+TGG | + | chr1.2:40370943-40370962 | MS.gene37256:CDS | 35.0% | |
CCACGAATGGAATTAACATT+TGG | - | chr1.2:40370946-40370965 | None:intergenic | 35.0% | |
CTACAATCTGATTCACGAAT+TGG | + | chr1.2:40370694-40370713 | MS.gene37256:CDS | 35.0% | |
GATGGTTTAACAGCAAATCA+AGG | + | chr1.2:40371221-40371240 | MS.gene37256:CDS | 35.0% | |
GTTAATTCCATTCGTGGATT+CGG | + | chr1.2:40370949-40370968 | MS.gene37256:CDS | 35.0% | |
TAACCTTGACACTACTGATA+TGG | + | chr1.2:40371313-40371332 | MS.gene37256:CDS | 35.0% | |
TAAGAGTGAAAATTGCAGTC+AGG | + | chr1.2:40371164-40371183 | MS.gene37256:intron | 35.0% | |
TGCTTGTCAAGAAAAAGACT+TGG | - | chr1.2:40372927-40372946 | None:intergenic | 35.0% | |
TTTATAGGTGCACACACATT+TGG | + | chr1.2:40372979-40372998 | MS.gene37256:intron | 35.0% | |
! | AAATAGGTTGTGTTTAGGGT+TGG | - | chr1.2:40373069-40373088 | None:intergenic | 35.0% |
! | AAGTAGATCCGTTTCCATTT+TGG | - | chr1.2:40373116-40373135 | None:intergenic | 35.0% |
! | ACTTTCAAGAGAGCTTTTGA+TGG | - | chr1.2:40370986-40371005 | None:intergenic | 35.0% |
! | AGTAGATCCGTTTCCATTTT+GGG | - | chr1.2:40373115-40373134 | None:intergenic | 35.0% |
! | CATTGGTAGAAAAAAGGTGT+TGG | - | chr1.2:40373227-40373246 | None:intergenic | 35.0% |
! | GTGAAGATGACAAACTTTTG+GGG | - | chr1.2:40371923-40371942 | None:intergenic | 35.0% |
! | TGAAGATGACAAACTTTTGG+GGG | - | chr1.2:40371922-40371941 | None:intergenic | 35.0% |
!!! | ACCCATTTTGGTTAGAAGAT+TGG | - | chr1.2:40373190-40373209 | None:intergenic | 35.0% |
!!! | CAACACCTTTTTTCTACCAA+TGG | + | chr1.2:40373225-40373244 | MS.gene37256:CDS | 35.0% |
ACTGATATGGTTGCATTGTC+AGG | + | chr1.2:40371326-40371345 | MS.gene37256:CDS | 40.0% | |
AGAGTGAAAATTGCAGTCAG+GGG | + | chr1.2:40371166-40371185 | MS.gene37256:intron | 40.0% | |
CAAAATGGGTCTTCTCCAAA+CGG | + | chr1.2:40373200-40373219 | MS.gene37256:CDS | 40.0% | |
CAACCATATCAGTAGTGTCA+AGG | - | chr1.2:40371319-40371338 | None:intergenic | 40.0% | |
CCAAGTAGTACATTCCATGA+AGG | - | chr1.2:40371194-40371213 | None:intergenic | 40.0% | |
CCTTCATGGAATGTACTACT+TGG | + | chr1.2:40371191-40371210 | MS.gene37256:CDS | 40.0% | |
CTATTCAACTTCAGTGGTAC+TGG | + | chr1.2:40373033-40373052 | MS.gene37256:CDS | 40.0% | |
GGGTAATATTAGCCCCTTAA+CGG | + | chr1.2:40373332-40373351 | MS.gene37256:CDS | 40.0% | |
GGTAATATTAGCCCCTTAAC+GGG | + | chr1.2:40373333-40373352 | MS.gene37256:CDS | 40.0% | |
GGTTTAACAGCAAATCAAGG+TGG | + | chr1.2:40371224-40371243 | MS.gene37256:CDS | 40.0% | |
GTACTACTTGGAAGAAGAGA+TGG | + | chr1.2:40371203-40371222 | MS.gene37256:CDS | 40.0% | |
TCTCTTGAAAGTTCATGCTC+TGG | + | chr1.2:40370994-40371013 | MS.gene37256:CDS | 40.0% | |
TTTGTGTGATGTTTCCTCCT+TGG | - | chr1.2:40370906-40370925 | None:intergenic | 40.0% | |
! | GTAGATCCGTTTCCATTTTG+GGG | - | chr1.2:40373114-40373133 | None:intergenic | 40.0% |
! | TCGATTTTGTTAGACCAAGG+AGG | + | chr1.2:40370889-40370908 | MS.gene37256:CDS | 40.0% |
! | TTGTGTTTAGGGTTGGATCT+GGG | - | chr1.2:40373062-40373081 | None:intergenic | 40.0% |
!! | AAAAAAGGTGTTGGTCCGTT+TGG | - | chr1.2:40373218-40373237 | None:intergenic | 40.0% |
!! | TGAGATAGTGGAAGAACCAT+TGG | - | chr1.2:40373244-40373263 | None:intergenic | 40.0% |
ACACAGAAGATTCTGCTGCA+AGG | - | chr1.2:40371047-40371066 | None:intergenic | 45.0% | |
AGCAGAATCTTCTGTGTCCT+TGG | + | chr1.2:40371050-40371069 | MS.gene37256:CDS | 45.0% | |
CACAGAAGATTCTGCTGCAA+GGG | - | chr1.2:40371046-40371065 | None:intergenic | 45.0% | |
GAGTGAAAATTGCAGTCAGG+GGG | + | chr1.2:40371167-40371186 | MS.gene37256:intron | 45.0% | |
TCTCCTTGAGTACCCGTTAA+GGG | - | chr1.2:40373348-40373367 | None:intergenic | 45.0% | |
TTCTCCTTGAGTACCCGTTA+AGG | - | chr1.2:40373349-40373368 | None:intergenic | 45.0% | |
! | ACATTGGCTAGGCTCTCAAA+TGG | - | chr1.2:40371272-40371291 | None:intergenic | 45.0% |
! | CGTTTGGAGAAGACCCATTT+TGG | - | chr1.2:40373202-40373221 | None:intergenic | 45.0% |
! | GTTGTGTTTAGGGTTGGATC+TGG | - | chr1.2:40373063-40373082 | None:intergenic | 45.0% |
!! | CGAATGTGTCTCGAGTTGAT+GGG | - | chr1.2:40373152-40373171 | None:intergenic | 45.0% |
!! | TCGAATGTGTCTCGAGTTGA+TGG | - | chr1.2:40373153-40373172 | None:intergenic | 45.0% |
!!! | GCGTCGATTTTGTTAGACCA+AGG | + | chr1.2:40370886-40370905 | MS.gene37256:CDS | 45.0% |
!! | AAAAAAAAAAAAAAAAAACT+AGG | - | chr1.2:40372863-40372882 | None:intergenic | 5.0% |
!! | AAATAAATAAAAATATAAGA+AGG | - | chr1.2:40370822-40370841 | None:intergenic | 5.0% |
!!! | AAAAATTCTATTTTTTTTTT+TGG | + | chr1.2:40372170-40372189 | MS.gene37256:intron | 5.0% |
!!! | ATGAATTTTTATATTTTTTA+CGG | + | chr1.2:40372115-40372134 | MS.gene37256:intron | 5.0% |
!!! | TAAAAATTTCTAATTTTTTT+GGG | - | chr1.2:40372077-40372096 | None:intergenic | 5.0% |
!!! | TTAAAAATTTCTAATTTTTT+TGG | - | chr1.2:40372078-40372097 | None:intergenic | 5.0% |
!!! | TTATATTTTTATTTATTTAG+AGG | + | chr1.2:40370824-40370843 | MS.gene37256:intron | 5.0% |
AACCACACCGAATCCACGAA+TGG | - | chr1.2:40370959-40370978 | None:intergenic | 50.0% | |
CTCCTTGAGTACCCGTTAAG+GGG | - | chr1.2:40373347-40373366 | None:intergenic | 50.0% | |
GCTAGGCTCTCAAATGGAGA+GGG | - | chr1.2:40371266-40371285 | None:intergenic | 50.0% | |
GCTCTCAAATGGAGAGGGAA+TGG | - | chr1.2:40371261-40371280 | None:intergenic | 50.0% | |
!! | TTCCATTCGTGGATTCGGTG+TGG | + | chr1.2:40370954-40370973 | MS.gene37256:CDS | 50.0% |
GGCTAGGCTCTCAAATGGAG+AGG | - | chr1.2:40371267-40371286 | None:intergenic | 55.0% | |
! | AGCCCCTTAACGGGTACTCA+AGG | + | chr1.2:40373342-40373361 | MS.gene37256:CDS | 55.0% |
TGCAGTCAGGGGGTCCTTCA+TGG | + | chr1.2:40371177-40371196 | MS.gene37256:intron | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.2 | gene | 40370677 | 40373404 | 40370677 | ID=MS.gene37256 |
chr1.2 | mRNA | 40370677 | 40373404 | 40370677 | ID=MS.gene37256.t1;Parent=MS.gene37256 |
chr1.2 | exon | 40370677 | 40370715 | 40370677 | ID=MS.gene37256.t1.exon1;Parent=MS.gene37256.t1 |
chr1.2 | CDS | 40370677 | 40370715 | 40370677 | ID=cds.MS.gene37256.t1;Parent=MS.gene37256.t1 |
chr1.2 | exon | 40370877 | 40371071 | 40370877 | ID=MS.gene37256.t1.exon2;Parent=MS.gene37256.t1 |
chr1.2 | CDS | 40370877 | 40371071 | 40370877 | ID=cds.MS.gene37256.t1;Parent=MS.gene37256.t1 |
chr1.2 | exon | 40371182 | 40371347 | 40371182 | ID=MS.gene37256.t1.exon3;Parent=MS.gene37256.t1 |
chr1.2 | CDS | 40371182 | 40371347 | 40371182 | ID=cds.MS.gene37256.t1;Parent=MS.gene37256.t1 |
chr1.2 | exon | 40372986 | 40373404 | 40372986 | ID=MS.gene37256.t1.exon4;Parent=MS.gene37256.t1 |
chr1.2 | CDS | 40372986 | 40373404 | 40372986 | ID=cds.MS.gene37256.t1;Parent=MS.gene37256.t1 |
Gene Sequence |
Protein sequence |