Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene055984.t1 | XP_003625275.2 | 96 | 329 | 13 | 0 | 1 | 329 | 1 | 329 | 9.70E-174 | 619.4 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene055984.t1 | Q9LEH3 | 71.8 | 326 | 90 | 1 | 2 | 327 | 4 | 327 | 3.1e-128 | 459.5 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene055984.t1 | G7KVF1 | 96.0 | 329 | 13 | 0 | 1 | 329 | 45 | 373 | 7.0e-174 | 619.4 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene85260 | MS.gene055984 | PPI |
MS.gene006133 | MS.gene055984 | PPI |
MS.gene055984 | MS.gene012253 | PPI |
MS.gene055984 | MS.gene88899 | PPI |
MS.gene055984 | MS.gene012254 | PPI |
MS.gene055984 | MS.gene026111 | PPI |
MS.gene055984 | MS.gene051844 | PPI |
MS.gene055984 | MS.gene025145 | PPI |
MS.gene055984 | MS.gene041122 | PPI |
MS.gene055984 | MS.gene047665 | PPI |
MS.gene055984 | MS.gene60708 | PPI |
MS.gene055984 | MS.gene010390 | PPI |
MS.gene055984 | MS.gene71395 | PPI |
MS.gene055984 | MS.gene006132 | PPI |
MS.gene055984 | MS.gene032194 | PPI |
MS.gene055984 | MS.gene051232 | PPI |
MS.gene055984 | MS.gene24862 | PPI |
MS.gene055984 | MS.gene85778 | PPI |
MS.gene055984 | MS.gene047667 | PPI |
MS.gene055984 | MS.gene041124 | PPI |
MS.gene055984 | MS.gene71393 | PPI |
MS.gene055984 | MS.gene010392 | PPI |
MS.gene001264 | MS.gene055984 | PPI |
MS.gene055984 | MS.gene61089 | PPI |
MS.gene051996 | MS.gene055984 | PPI |
MS.gene055984 | MS.gene052951 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene055984.t1 | MTR_7g093370 | 96.049 | 329 | 13 | 0 | 1 | 329 | 45 | 373 | 0.0 | 644 |
MS.gene055984.t1 | MTR_1g054205 | 75.988 | 329 | 78 | 1 | 1 | 329 | 1 | 328 | 0.0 | 508 |
MS.gene055984.t1 | MTR_2g029815 | 62.013 | 308 | 116 | 1 | 20 | 327 | 24 | 330 | 6.81e-135 | 387 |
MS.gene055984.t1 | MTR_2g029820 | 59.283 | 307 | 124 | 1 | 21 | 327 | 25 | 330 | 5.65e-131 | 377 |
MS.gene055984.t1 | MTR_2g029830 | 60.586 | 307 | 120 | 1 | 21 | 327 | 24 | 329 | 1.86e-130 | 376 |
MS.gene055984.t1 | MTR_2g029800 | 56.402 | 328 | 140 | 2 | 2 | 327 | 4 | 330 | 4.90e-129 | 372 |
MS.gene055984.t1 | MTR_2g029860 | 60.065 | 308 | 122 | 1 | 21 | 328 | 25 | 331 | 6.58e-128 | 370 |
MS.gene055984.t1 | MTR_2g029750 | 58.958 | 307 | 125 | 1 | 21 | 327 | 25 | 330 | 3.94e-126 | 365 |
MS.gene055984.t1 | MTR_2g028980 | 57.585 | 323 | 136 | 1 | 5 | 327 | 9 | 330 | 4.40e-126 | 365 |
MS.gene055984.t1 | MTR_2g029850 | 56.839 | 329 | 139 | 2 | 2 | 328 | 4 | 331 | 7.02e-126 | 364 |
MS.gene055984.t1 | MTR_2g029560 | 57.508 | 313 | 132 | 1 | 16 | 328 | 15 | 326 | 2.07e-125 | 363 |
MS.gene055984.t1 | MTR_2g029740 | 57.655 | 307 | 129 | 1 | 21 | 327 | 25 | 330 | 1.45e-124 | 361 |
MS.gene055984.t1 | MTR_4g125940 | 54.878 | 328 | 143 | 2 | 2 | 327 | 5 | 329 | 2.54e-123 | 357 |
MS.gene055984.t1 | MTR_2g040000 | 54.012 | 324 | 143 | 2 | 7 | 327 | 11 | 331 | 5.77e-122 | 353 |
MS.gene055984.t1 | MTR_2g029910 | 55.623 | 329 | 142 | 3 | 2 | 327 | 5 | 332 | 5.63e-121 | 352 |
MS.gene055984.t1 | MTR_2g029730 | 56.550 | 313 | 135 | 1 | 16 | 328 | 16 | 327 | 4.85e-120 | 349 |
MS.gene055984.t1 | MTR_3g094650 | 54.462 | 325 | 134 | 6 | 5 | 327 | 10 | 322 | 5.64e-118 | 343 |
MS.gene055984.t1 | MTR_3g094670 | 54.517 | 321 | 134 | 5 | 9 | 327 | 12 | 322 | 5.03e-113 | 330 |
MS.gene055984.t1 | MTR_5g021060 | 52.475 | 303 | 142 | 2 | 25 | 327 | 30 | 330 | 1.02e-112 | 330 |
MS.gene055984.t1 | MTR_5g017850 | 52.500 | 320 | 147 | 4 | 9 | 327 | 11 | 326 | 9.06e-111 | 325 |
MS.gene055984.t1 | MTR_4g125940 | 58.696 | 276 | 109 | 2 | 54 | 327 | 2 | 274 | 6.48e-110 | 321 |
MS.gene055984.t1 | MTR_3g094630 | 53.894 | 321 | 136 | 5 | 9 | 327 | 12 | 322 | 8.17e-110 | 322 |
MS.gene055984.t1 | MTR_8g076820 | 51.485 | 303 | 145 | 2 | 25 | 327 | 30 | 330 | 1.07e-107 | 317 |
MS.gene055984.t1 | MTR_2g029830 | 60.311 | 257 | 101 | 1 | 71 | 327 | 6 | 261 | 3.09e-107 | 315 |
MS.gene055984.t1 | MTR_5g017860 | 50.938 | 320 | 152 | 4 | 9 | 327 | 11 | 326 | 3.32e-107 | 316 |
MS.gene055984.t1 | MTR_3g072190 | 51.645 | 304 | 137 | 3 | 24 | 327 | 25 | 318 | 6.13e-106 | 312 |
MS.gene055984.t1 | MTR_5g083860 | 48.750 | 320 | 152 | 5 | 10 | 327 | 16 | 325 | 6.46e-105 | 310 |
MS.gene055984.t1 | MTR_2g084080 | 48.308 | 325 | 156 | 4 | 5 | 327 | 3 | 317 | 3.89e-104 | 308 |
MS.gene055984.t1 | MTR_3g466200 | 49.695 | 328 | 151 | 7 | 3 | 327 | 4 | 320 | 6.50e-104 | 307 |
MS.gene055984.t1 | MTR_2g084000 | 47.059 | 323 | 160 | 4 | 6 | 327 | 7 | 319 | 2.46e-101 | 301 |
MS.gene055984.t1 | MTR_2g084020 | 48.000 | 325 | 158 | 4 | 5 | 327 | 3 | 318 | 3.29e-101 | 300 |
MS.gene055984.t1 | MTR_2g084110 | 48.773 | 326 | 153 | 5 | 5 | 327 | 3 | 317 | 1.60e-100 | 298 |
MS.gene055984.t1 | MTR_4g083710 | 47.975 | 321 | 156 | 4 | 10 | 327 | 12 | 324 | 1.76e-100 | 299 |
MS.gene055984.t1 | MTR_2g084010 | 48.308 | 325 | 157 | 4 | 5 | 327 | 3 | 318 | 1.86e-100 | 298 |
MS.gene055984.t1 | MTR_4g029170 | 47.432 | 331 | 160 | 6 | 1 | 327 | 1 | 321 | 2.31e-100 | 298 |
MS.gene055984.t1 | MTR_5g074970 | 47.368 | 323 | 154 | 6 | 10 | 327 | 15 | 326 | 1.04e-98 | 294 |
MS.gene055984.t1 | MTR_7g072510 | 45.455 | 319 | 164 | 3 | 9 | 327 | 4 | 312 | 5.34e-98 | 292 |
MS.gene055984.t1 | MTR_2g084090 | 47.239 | 326 | 159 | 5 | 5 | 327 | 3 | 318 | 1.35e-97 | 291 |
MS.gene055984.t1 | MTR_1g022970 | 47.525 | 303 | 158 | 1 | 25 | 327 | 46 | 347 | 1.62e-95 | 287 |
MS.gene055984.t1 | MTR_4g029200 | 45.741 | 317 | 162 | 3 | 11 | 327 | 32 | 338 | 3.20e-95 | 286 |
MS.gene055984.t1 | MTR_4g074995 | 47.678 | 323 | 141 | 6 | 10 | 327 | 9 | 308 | 1.93e-94 | 283 |
MS.gene055984.t1 | MTR_1g115900 | 44.753 | 324 | 166 | 6 | 6 | 327 | 9 | 321 | 4.05e-94 | 283 |
MS.gene055984.t1 | MTR_5g074740 | 45.370 | 324 | 165 | 5 | 7 | 327 | 7 | 321 | 1.27e-93 | 281 |
MS.gene055984.t1 | MTR_5g074760 | 45.062 | 324 | 166 | 5 | 7 | 327 | 7 | 321 | 1.44e-93 | 281 |
MS.gene055984.t1 | MTR_5g014100 | 47.557 | 307 | 156 | 3 | 25 | 327 | 26 | 331 | 1.56e-93 | 281 |
MS.gene055984.t1 | MTR_5g074860 | 45.370 | 324 | 165 | 5 | 6 | 326 | 10 | 324 | 6.16e-93 | 280 |
MS.gene055984.t1 | MTR_5g074710 | 44.860 | 321 | 165 | 5 | 10 | 327 | 10 | 321 | 1.69e-92 | 278 |
MS.gene055984.t1 | MTR_4g030890 | 45.603 | 307 | 161 | 4 | 21 | 327 | 96 | 396 | 1.77e-92 | 281 |
MS.gene055984.t1 | MTR_4g031140 | 43.344 | 323 | 172 | 5 | 11 | 328 | 9 | 325 | 3.19e-92 | 278 |
MS.gene055984.t1 | MTR_7g072480 | 46.519 | 316 | 159 | 3 | 12 | 327 | 11 | 316 | 3.76e-92 | 277 |
MS.gene055984.t1 | MTR_4g122640 | 45.875 | 303 | 160 | 3 | 25 | 327 | 38 | 336 | 1.52e-91 | 276 |
MS.gene055984.t1 | MTR_4g029180 | 47.176 | 301 | 147 | 5 | 29 | 327 | 31 | 321 | 3.88e-91 | 275 |
MS.gene055984.t1 | MTR_3g466180 | 45.141 | 319 | 165 | 3 | 9 | 327 | 15 | 323 | 2.15e-90 | 273 |
MS.gene055984.t1 | MTR_4g046713 | 41.768 | 328 | 186 | 4 | 1 | 327 | 3 | 326 | 5.65e-89 | 270 |
MS.gene055984.t1 | MTR_2g088770 | 44.237 | 321 | 171 | 6 | 10 | 327 | 10 | 325 | 1.07e-87 | 266 |
MS.gene055984.t1 | MTR_3g467600 | 43.692 | 325 | 172 | 4 | 6 | 327 | 8 | 324 | 2.56e-87 | 265 |
MS.gene055984.t1 | MTR_3g092990 | 42.462 | 325 | 177 | 4 | 7 | 327 | 8 | 326 | 3.27e-87 | 265 |
MS.gene055984.t1 | MTR_4g074990 | 44.548 | 321 | 151 | 4 | 10 | 327 | 9 | 305 | 3.72e-87 | 264 |
MS.gene055984.t1 | MTR_3g072190 | 51.154 | 260 | 117 | 3 | 68 | 327 | 2 | 251 | 6.98e-87 | 261 |
MS.gene055984.t1 | MTR_4g114210 | 45.031 | 322 | 161 | 7 | 13 | 327 | 8 | 320 | 1.23e-86 | 263 |
MS.gene055984.t1 | MTR_5g049280 | 41.617 | 334 | 186 | 7 | 1 | 327 | 6 | 337 | 1.59e-86 | 264 |
MS.gene055984.t1 | MTR_7g107520 | 43.653 | 323 | 174 | 6 | 6 | 327 | 5 | 320 | 1.97e-84 | 258 |
MS.gene055984.t1 | MTR_4g029190 | 44.231 | 312 | 166 | 4 | 16 | 327 | 37 | 340 | 2.85e-84 | 258 |
MS.gene055984.t1 | MTR_7g086820 | 43.607 | 305 | 162 | 6 | 23 | 327 | 18 | 312 | 9.65e-84 | 256 |
MS.gene055984.t1 | MTR_0155s0040 | 43.648 | 307 | 155 | 8 | 23 | 327 | 25 | 315 | 2.15e-82 | 252 |
MS.gene055984.t1 | MTR_1g009750 | 42.296 | 331 | 184 | 5 | 1 | 327 | 1 | 328 | 8.11e-81 | 249 |
MS.gene055984.t1 | MTR_2g008710 | 42.342 | 333 | 178 | 7 | 1 | 327 | 1 | 325 | 2.46e-80 | 247 |
MS.gene055984.t1 | MTR_6g027440 | 43.125 | 320 | 172 | 8 | 9 | 327 | 4 | 314 | 2.77e-80 | 247 |
MS.gene055984.t1 | MTR_5g022870 | 41.956 | 317 | 173 | 8 | 12 | 327 | 10 | 316 | 4.30e-80 | 246 |
MS.gene055984.t1 | MTR_1g101830 | 40.615 | 325 | 179 | 7 | 4 | 327 | 11 | 322 | 6.49e-80 | 246 |
MS.gene055984.t1 | MTR_7g026990 | 41.176 | 323 | 178 | 5 | 7 | 328 | 12 | 323 | 1.11e-79 | 246 |
MS.gene055984.t1 | MTR_2g099175 | 41.424 | 309 | 168 | 6 | 24 | 327 | 35 | 335 | 1.39e-79 | 246 |
MS.gene055984.t1 | MTR_1g077000 | 40.557 | 323 | 178 | 6 | 5 | 327 | 19 | 327 | 1.39e-78 | 243 |
MS.gene055984.t1 | MTR_8g075100 | 42.763 | 304 | 163 | 8 | 25 | 327 | 26 | 319 | 5.72e-78 | 241 |
MS.gene055984.t1 | MTR_4g074980 | 42.633 | 319 | 149 | 6 | 10 | 327 | 9 | 294 | 2.99e-77 | 238 |
MS.gene055984.t1 | MTR_3g092990 | 41.159 | 328 | 166 | 6 | 7 | 327 | 8 | 315 | 2.14e-76 | 237 |
MS.gene055984.t1 | MTR_6g043280 | 40.179 | 336 | 178 | 8 | 2 | 327 | 10 | 332 | 2.81e-76 | 237 |
MS.gene055984.t1 | MTR_4g133800 | 41.806 | 299 | 162 | 6 | 30 | 327 | 46 | 333 | 1.86e-75 | 235 |
MS.gene055984.t1 | MTR_2g437770 | 41.830 | 306 | 163 | 9 | 25 | 328 | 50 | 342 | 2.33e-75 | 235 |
MS.gene055984.t1 | MTR_4g127670 | 42.857 | 308 | 165 | 4 | 24 | 327 | 23 | 323 | 9.10e-75 | 233 |
MS.gene055984.t1 | MTR_1g025980 | 40.823 | 316 | 177 | 7 | 9 | 323 | 8 | 314 | 1.23e-74 | 233 |
MS.gene055984.t1 | MTR_7g029030 | 40.566 | 318 | 178 | 5 | 12 | 327 | 12 | 320 | 4.74e-74 | 231 |
MS.gene055984.t1 | MTR_1g086320 | 40.240 | 333 | 185 | 7 | 6 | 327 | 4 | 333 | 2.17e-73 | 230 |
MS.gene055984.t1 | MTR_4g074980 | 46.825 | 252 | 123 | 4 | 10 | 257 | 9 | 253 | 2.79e-73 | 227 |
MS.gene055984.t1 | MTR_5g074860 | 40.615 | 325 | 142 | 6 | 6 | 327 | 10 | 286 | 3.59e-73 | 228 |
MS.gene055984.t1 | MTR_1g038680 | 40.924 | 303 | 172 | 5 | 29 | 327 | 33 | 332 | 1.15e-72 | 228 |
MS.gene055984.t1 | MTR_4g087965 | 37.941 | 340 | 189 | 7 | 3 | 323 | 6 | 342 | 1.28e-72 | 228 |
MS.gene055984.t1 | MTR_2g067440 | 38.806 | 335 | 170 | 7 | 25 | 329 | 60 | 389 | 6.75e-72 | 228 |
MS.gene055984.t1 | MTR_1g086490 | 39.412 | 340 | 185 | 8 | 6 | 327 | 4 | 340 | 1.24e-71 | 226 |
MS.gene055984.t1 | MTR_4g095450 | 41.121 | 321 | 174 | 7 | 9 | 323 | 9 | 320 | 2.13e-71 | 224 |
MS.gene055984.t1 | MTR_5g016010 | 38.750 | 320 | 188 | 5 | 8 | 323 | 10 | 325 | 2.50e-71 | 224 |
MS.gene055984.t1 | MTR_2g078610 | 38.438 | 333 | 171 | 6 | 25 | 326 | 76 | 405 | 3.58e-71 | 226 |
MS.gene055984.t1 | MTR_2g077990 | 38.438 | 333 | 171 | 6 | 25 | 326 | 76 | 405 | 1.03e-70 | 225 |
MS.gene055984.t1 | MTR_6g043240 | 40.708 | 339 | 170 | 10 | 5 | 328 | 10 | 332 | 1.52e-70 | 223 |
MS.gene055984.t1 | MTR_1g009750 | 39.818 | 329 | 178 | 6 | 1 | 327 | 1 | 311 | 1.71e-70 | 222 |
MS.gene055984.t1 | MTR_7g086870 | 39.869 | 306 | 169 | 7 | 23 | 327 | 20 | 311 | 6.52e-70 | 220 |
MS.gene055984.t1 | MTR_1g090760 | 36.585 | 328 | 204 | 3 | 2 | 327 | 5 | 330 | 3.01e-69 | 219 |
MS.gene055984.t1 | MTR_2g008160 | 39.048 | 315 | 179 | 7 | 18 | 327 | 17 | 323 | 3.54e-68 | 216 |
MS.gene055984.t1 | MTR_2g008730 | 39.692 | 325 | 158 | 7 | 9 | 327 | 9 | 301 | 1.68e-66 | 211 |
MS.gene055984.t1 | MTR_2g078280 | 38.245 | 319 | 163 | 6 | 25 | 312 | 76 | 391 | 5.07e-66 | 213 |
MS.gene055984.t1 | MTR_8g062780 | 37.383 | 321 | 196 | 4 | 9 | 327 | 7 | 324 | 1.26e-65 | 210 |
MS.gene055984.t1 | MTR_5g033470 | 36.538 | 312 | 190 | 5 | 21 | 327 | 69 | 377 | 5.98e-64 | 207 |
MS.gene055984.t1 | MTR_2g067450 | 38.835 | 309 | 172 | 6 | 25 | 326 | 11 | 309 | 3.65e-63 | 203 |
MS.gene055984.t1 | MTR_3g105790 | 37.888 | 322 | 189 | 5 | 9 | 327 | 9 | 322 | 9.29e-63 | 202 |
MS.gene055984.t1 | MTR_2g029880 | 54.211 | 190 | 77 | 2 | 138 | 327 | 9 | 188 | 2.08e-62 | 197 |
MS.gene055984.t1 | MTR_1g066710 | 36.570 | 309 | 184 | 6 | 23 | 328 | 25 | 324 | 3.58e-62 | 201 |
MS.gene055984.t1 | MTR_6g043460 | 37.705 | 305 | 178 | 6 | 20 | 323 | 31 | 324 | 7.11e-60 | 196 |
MS.gene055984.t1 | MTR_0286s0010 | 35.962 | 317 | 195 | 5 | 14 | 327 | 23 | 334 | 1.90e-59 | 194 |
MS.gene055984.t1 | MTR_6g008075 | 35.962 | 317 | 195 | 5 | 14 | 327 | 23 | 334 | 1.90e-59 | 194 |
MS.gene055984.t1 | MTR_0147s0010 | 34.161 | 322 | 175 | 5 | 25 | 326 | 77 | 381 | 3.81e-59 | 194 |
MS.gene055984.t1 | MTR_1g066380 | 35.599 | 309 | 187 | 6 | 23 | 328 | 25 | 324 | 1.35e-58 | 191 |
MS.gene055984.t1 | MTR_1g066640 | 35.922 | 309 | 186 | 6 | 23 | 328 | 25 | 324 | 4.95e-58 | 190 |
MS.gene055984.t1 | MTR_1g066680 | 35.783 | 313 | 188 | 7 | 19 | 328 | 21 | 323 | 6.10e-58 | 190 |
MS.gene055984.t1 | MTR_4g132490 | 35.410 | 305 | 191 | 4 | 24 | 327 | 28 | 327 | 1.79e-57 | 189 |
MS.gene055984.t1 | MTR_4g132110 | 35.314 | 303 | 182 | 6 | 25 | 323 | 32 | 324 | 5.53e-57 | 187 |
MS.gene055984.t1 | MTR_4g132110 | 36.039 | 308 | 178 | 8 | 25 | 323 | 32 | 329 | 3.65e-56 | 186 |
MS.gene055984.t1 | MTR_3g072210 | 46.354 | 192 | 94 | 3 | 137 | 327 | 55 | 238 | 1.61e-51 | 171 |
MS.gene055984.t1 | MTR_2g008160 | 34.286 | 315 | 159 | 7 | 18 | 327 | 17 | 288 | 4.10e-51 | 171 |
MS.gene055984.t1 | MTR_5g074700 | 40.948 | 232 | 112 | 5 | 99 | 327 | 5 | 214 | 3.00e-50 | 166 |
MS.gene055984.t1 | MTR_1g066380 | 35.741 | 263 | 157 | 6 | 69 | 328 | 3 | 256 | 1.03e-46 | 159 |
MS.gene055984.t1 | MTR_2g008160 | 43.103 | 174 | 94 | 3 | 18 | 191 | 17 | 185 | 2.70e-42 | 145 |
MS.gene055984.t1 | MTR_3g105790 | 35.857 | 251 | 151 | 4 | 80 | 327 | 3 | 246 | 2.12e-39 | 139 |
MS.gene055984.t1 | MTR_3g072260 | 54.198 | 131 | 52 | 2 | 10 | 133 | 4 | 133 | 6.84e-39 | 135 |
MS.gene055984.t1 | MTR_7g072490 | 37.200 | 250 | 93 | 5 | 71 | 320 | 2 | 187 | 2.55e-36 | 130 |
MS.gene055984.t1 | MTR_2g077980 | 29.856 | 278 | 151 | 7 | 88 | 326 | 11 | 283 | 9.70e-35 | 128 |
MS.gene055984.t1 | MTR_2g078560 | 31.364 | 220 | 118 | 4 | 135 | 323 | 99 | 316 | 1.10e-31 | 121 |
MS.gene055984.t1 | MTR_7g086790 | 35.789 | 190 | 99 | 5 | 72 | 261 | 17 | 183 | 1.83e-26 | 103 |
MS.gene055984.t1 | MTR_5g058120 | 37.654 | 162 | 88 | 3 | 162 | 323 | 7 | 155 | 1.28e-24 | 100 |
MS.gene055984.t1 | MTR_4g031040 | 34.483 | 174 | 70 | 3 | 86 | 259 | 2 | 131 | 5.27e-22 | 90.5 |
MS.gene055984.t1 | MTR_3g462850 | 36.620 | 142 | 85 | 5 | 190 | 327 | 9 | 149 | 5.59e-21 | 88.2 |
MS.gene055984.t1 | MTR_1g098320 | 50.000 | 76 | 36 | 1 | 248 | 323 | 47 | 120 | 8.77e-20 | 84.7 |
MS.gene055984.t1 | MTR_6g048160 | 56.944 | 72 | 26 | 2 | 64 | 135 | 22 | 88 | 2.08e-18 | 79.3 |
MS.gene055984.t1 | MTR_5g074770 | 40.860 | 93 | 54 | 1 | 234 | 326 | 17 | 108 | 1.25e-17 | 77.8 |
MS.gene055984.t1 | MTR_4g114220 | 48.235 | 85 | 33 | 2 | 51 | 135 | 29 | 102 | 5.02e-17 | 77.0 |
MS.gene055984.t1 | MTR_1g089005 | 38.655 | 119 | 65 | 3 | 25 | 137 | 15 | 131 | 3.33e-16 | 75.1 |
MS.gene055984.t1 | MTR_2g029930 | 45.631 | 103 | 27 | 4 | 21 | 109 | 15 | 102 | 8.02e-16 | 72.8 |
MS.gene055984.t1 | MTR_7g086810 | 31.707 | 123 | 57 | 1 | 21 | 143 | 2 | 97 | 5.19e-15 | 73.6 |
MS.gene055984.t1 | MTR_7g086785 | 34.074 | 135 | 87 | 2 | 71 | 205 | 4 | 136 | 4.72e-14 | 68.9 |
MS.gene055984.t1 | MTR_7g107500 | 46.429 | 84 | 42 | 2 | 244 | 327 | 17 | 97 | 5.71e-14 | 67.4 |
MS.gene055984.t1 | MTR_4g012865 | 43.478 | 69 | 38 | 1 | 25 | 93 | 77 | 144 | 1.30e-13 | 67.8 |
MS.gene055984.t1 | MTR_3g088160 | 28.000 | 200 | 110 | 6 | 119 | 309 | 180 | 354 | 1.82e-13 | 70.9 |
MS.gene055984.t1 | MTR_3g088160 | 28.000 | 200 | 110 | 6 | 119 | 309 | 180 | 354 | 2.27e-13 | 70.9 |
MS.gene055984.t1 | MTR_3g107060 | 26.275 | 255 | 137 | 8 | 57 | 308 | 106 | 312 | 7.48e-13 | 68.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene055984.t1 | AT5G06720 | 70.303 | 330 | 93 | 2 | 4 | 329 | 7 | 335 | 1.69e-167 | 469 |
MS.gene055984.t1 | AT5G06730 | 67.901 | 324 | 101 | 2 | 7 | 328 | 13 | 335 | 2.07e-158 | 447 |
MS.gene055984.t1 | AT2G38380 | 56.024 | 332 | 139 | 5 | 2 | 327 | 3 | 333 | 7.49e-125 | 362 |
MS.gene055984.t1 | AT2G38390 | 55.844 | 308 | 134 | 2 | 21 | 327 | 27 | 333 | 1.59e-123 | 358 |
MS.gene055984.t1 | AT5G19880 | 55.663 | 309 | 135 | 2 | 21 | 327 | 21 | 329 | 9.63e-122 | 353 |
MS.gene055984.t1 | AT3G32980 | 54.955 | 333 | 142 | 5 | 2 | 327 | 3 | 334 | 3.31e-121 | 352 |
MS.gene055984.t1 | AT4G08780 | 54.693 | 309 | 137 | 3 | 21 | 327 | 20 | 327 | 3.44e-121 | 352 |
MS.gene055984.t1 | AT4G08770 | 54.369 | 309 | 138 | 3 | 21 | 327 | 20 | 327 | 2.39e-118 | 345 |
MS.gene055984.t1 | AT5G19890 | 54.103 | 329 | 140 | 5 | 1 | 327 | 8 | 327 | 2.68e-118 | 344 |
MS.gene055984.t1 | AT3G49110 | 54.154 | 325 | 141 | 4 | 10 | 327 | 13 | 336 | 4.57e-118 | 345 |
MS.gene055984.t1 | AT3G49120 | 53.846 | 325 | 145 | 4 | 7 | 327 | 12 | 335 | 8.50e-118 | 344 |
MS.gene055984.t1 | AT2G18140 | 52.824 | 301 | 140 | 2 | 29 | 329 | 39 | 337 | 2.59e-113 | 332 |
MS.gene055984.t1 | AT5G66390 | 51.792 | 307 | 146 | 2 | 21 | 327 | 29 | 333 | 4.19e-113 | 331 |
MS.gene055984.t1 | AT2G18150 | 53.488 | 301 | 138 | 2 | 29 | 329 | 40 | 338 | 4.43e-113 | 332 |
MS.gene055984.t1 | AT4G36430 | 52.787 | 305 | 142 | 2 | 23 | 327 | 28 | 330 | 1.10e-112 | 330 |
MS.gene055984.t1 | AT3G50990 | 50.814 | 307 | 149 | 2 | 21 | 327 | 37 | 341 | 1.08e-108 | 320 |
MS.gene055984.t1 | AT5G05340 | 51.299 | 308 | 138 | 5 | 22 | 327 | 27 | 324 | 6.55e-105 | 310 |
MS.gene055984.t1 | AT1G44970 | 49.673 | 306 | 153 | 1 | 22 | 327 | 42 | 346 | 2.43e-100 | 299 |
MS.gene055984.t1 | AT1G49570 | 49.338 | 302 | 147 | 4 | 25 | 323 | 48 | 346 | 9.98e-100 | 298 |
MS.gene055984.t1 | AT2G35380 | 50.489 | 307 | 147 | 4 | 25 | 327 | 30 | 335 | 1.00e-97 | 292 |
MS.gene055984.t1 | AT1G14550 | 45.342 | 322 | 167 | 4 | 7 | 327 | 8 | 321 | 6.75e-97 | 290 |
MS.gene055984.t1 | AT5G58390 | 48.447 | 322 | 153 | 6 | 9 | 327 | 5 | 316 | 1.16e-95 | 286 |
MS.gene055984.t1 | AT1G14540 | 45.652 | 322 | 165 | 4 | 8 | 327 | 2 | 315 | 8.28e-95 | 284 |
MS.gene055984.t1 | AT5G58400 | 46.894 | 322 | 158 | 6 | 9 | 327 | 14 | 325 | 6.65e-94 | 282 |
MS.gene055984.t1 | AT2G22420 | 43.574 | 319 | 174 | 4 | 9 | 327 | 7 | 319 | 9.82e-93 | 279 |
MS.gene055984.t1 | AT5G17820 | 44.340 | 318 | 163 | 6 | 11 | 327 | 9 | 313 | 1.01e-90 | 273 |
MS.gene055984.t1 | AT5G17820 | 44.340 | 318 | 163 | 6 | 11 | 327 | 62 | 366 | 1.57e-89 | 272 |
MS.gene055984.t1 | AT3G03670 | 45.938 | 320 | 167 | 4 | 10 | 327 | 6 | 321 | 1.94e-89 | 271 |
MS.gene055984.t1 | AT1G68850 | 44.156 | 308 | 165 | 7 | 25 | 327 | 30 | 335 | 2.98e-89 | 271 |
MS.gene055984.t1 | AT4G16270 | 45.333 | 300 | 158 | 5 | 29 | 327 | 54 | 348 | 5.41e-87 | 265 |
MS.gene055984.t1 | AT5G64120 | 46.823 | 299 | 150 | 6 | 29 | 327 | 39 | 328 | 1.78e-86 | 263 |
MS.gene055984.t1 | AT2G18980 | 44.308 | 325 | 169 | 5 | 7 | 327 | 7 | 323 | 5.48e-86 | 262 |
MS.gene055984.t1 | AT3G21770 | 43.450 | 313 | 168 | 6 | 14 | 323 | 18 | 324 | 1.02e-85 | 261 |
MS.gene055984.t1 | AT2G41480 | 42.813 | 327 | 173 | 7 | 7 | 327 | 10 | 328 | 4.04e-84 | 257 |
MS.gene055984.t1 | AT4G11290 | 42.724 | 323 | 179 | 5 | 8 | 327 | 7 | 326 | 6.32e-84 | 257 |
MS.gene055984.t1 | AT1G05260 | 42.138 | 318 | 175 | 6 | 13 | 327 | 14 | 325 | 2.48e-83 | 255 |
MS.gene055984.t1 | AT5G39580 | 46.273 | 322 | 160 | 9 | 10 | 327 | 7 | 319 | 5.58e-83 | 254 |
MS.gene055984.t1 | AT4G30170 | 43.042 | 309 | 164 | 5 | 23 | 327 | 25 | 325 | 4.18e-81 | 249 |
MS.gene055984.t1 | AT3G01190 | 41.009 | 317 | 179 | 6 | 12 | 327 | 12 | 321 | 3.56e-80 | 247 |
MS.gene055984.t1 | AT5G15180 | 39.319 | 323 | 187 | 6 | 9 | 327 | 12 | 329 | 6.71e-80 | 246 |
MS.gene055984.t1 | AT4G37530 | 44.089 | 313 | 169 | 4 | 18 | 327 | 20 | 329 | 2.09e-79 | 245 |
MS.gene055984.t1 | AT4G25980 | 40.938 | 320 | 177 | 5 | 13 | 327 | 14 | 326 | 7.97e-79 | 244 |
MS.gene055984.t1 | AT5G51890 | 40.248 | 323 | 183 | 7 | 6 | 327 | 9 | 322 | 1.85e-78 | 243 |
MS.gene055984.t1 | AT5G42180 | 41.456 | 316 | 175 | 7 | 12 | 326 | 10 | 316 | 1.14e-77 | 240 |
MS.gene055984.t1 | AT3G49960 | 43.125 | 320 | 174 | 6 | 12 | 327 | 14 | 329 | 3.50e-77 | 239 |
MS.gene055984.t1 | AT5G14130 | 40.000 | 325 | 189 | 4 | 4 | 327 | 11 | 330 | 4.43e-77 | 239 |
MS.gene055984.t1 | AT1G77100 | 42.154 | 325 | 173 | 6 | 8 | 327 | 5 | 319 | 7.15e-77 | 238 |
MS.gene055984.t1 | AT5G14130 | 40.000 | 325 | 189 | 4 | 4 | 327 | 52 | 371 | 9.98e-77 | 240 |
MS.gene055984.t1 | AT4G37520 | 42.105 | 304 | 170 | 4 | 23 | 323 | 25 | 325 | 5.96e-76 | 236 |
MS.gene055984.t1 | AT2G39040 | 42.308 | 312 | 170 | 6 | 22 | 327 | 43 | 350 | 2.73e-75 | 235 |
MS.gene055984.t1 | AT1G05240 | 40.134 | 299 | 168 | 5 | 29 | 323 | 30 | 321 | 1.70e-74 | 233 |
MS.gene055984.t1 | AT1G05250 | 40.134 | 299 | 168 | 5 | 29 | 323 | 30 | 321 | 1.70e-74 | 233 |
MS.gene055984.t1 | AT1G71695 | 42.951 | 305 | 163 | 6 | 25 | 327 | 44 | 339 | 1.78e-74 | 233 |
MS.gene055984.t1 | AT4G33420 | 40.994 | 322 | 170 | 8 | 12 | 327 | 18 | 325 | 2.04e-74 | 232 |
MS.gene055984.t1 | AT5G64110 | 41.337 | 329 | 176 | 7 | 7 | 327 | 11 | 330 | 4.49e-74 | 231 |
MS.gene055984.t1 | AT4G33420 | 40.994 | 322 | 170 | 8 | 12 | 327 | 65 | 372 | 7.90e-74 | 232 |
MS.gene055984.t1 | AT2G43480 | 39.185 | 319 | 178 | 8 | 16 | 327 | 26 | 335 | 9.23e-74 | 231 |
MS.gene055984.t1 | AT4G37520 | 41.447 | 304 | 169 | 5 | 23 | 323 | 25 | 322 | 3.21e-73 | 229 |
MS.gene055984.t1 | AT5G64100 | 42.000 | 300 | 164 | 6 | 29 | 327 | 41 | 331 | 5.49e-73 | 229 |
MS.gene055984.t1 | AT4G33870 | 36.283 | 339 | 177 | 5 | 22 | 325 | 65 | 399 | 5.97e-72 | 228 |
MS.gene055984.t1 | AT2G35380 | 50.000 | 246 | 119 | 3 | 86 | 327 | 2 | 247 | 8.01e-72 | 223 |
MS.gene055984.t1 | AT5G24070 | 39.937 | 318 | 174 | 9 | 18 | 328 | 29 | 336 | 2.24e-71 | 225 |
MS.gene055984.t1 | AT2G34060 | 38.436 | 307 | 183 | 5 | 22 | 324 | 39 | 343 | 2.27e-71 | 225 |
MS.gene055984.t1 | AT5G67400 | 40.367 | 327 | 185 | 8 | 2 | 323 | 4 | 325 | 2.97e-71 | 224 |
MS.gene055984.t1 | AT4G37530 | 46.360 | 261 | 136 | 3 | 18 | 275 | 20 | 279 | 7.87e-71 | 222 |
MS.gene055984.t1 | AT4G26010 | 40.000 | 320 | 168 | 9 | 13 | 327 | 9 | 309 | 4.69e-69 | 218 |
MS.gene055984.t1 | AT4G26010 | 40.000 | 320 | 168 | 9 | 13 | 327 | 37 | 337 | 7.70e-69 | 218 |
MS.gene055984.t1 | AT1G34510 | 38.486 | 317 | 177 | 7 | 13 | 327 | 9 | 309 | 2.50e-68 | 216 |
MS.gene055984.t1 | AT5G22410 | 40.498 | 321 | 173 | 11 | 12 | 324 | 12 | 322 | 3.70e-67 | 214 |
MS.gene055984.t1 | AT4G17690 | 38.158 | 304 | 180 | 3 | 25 | 327 | 26 | 322 | 6.18e-67 | 213 |
MS.gene055984.t1 | AT2G24800 | 39.159 | 309 | 176 | 5 | 23 | 327 | 29 | 329 | 8.63e-67 | 213 |
MS.gene055984.t1 | AT1G30870 | 38.961 | 308 | 170 | 9 | 25 | 327 | 51 | 345 | 1.72e-66 | 213 |
MS.gene055984.t1 | AT4G31760 | 38.889 | 324 | 183 | 6 | 11 | 327 | 11 | 326 | 3.15e-66 | 211 |
MS.gene055984.t1 | AT5G47000 | 35.061 | 328 | 204 | 5 | 2 | 327 | 10 | 330 | 6.77e-66 | 211 |
MS.gene055984.t1 | AT1G24110 | 36.364 | 319 | 195 | 6 | 13 | 327 | 8 | 322 | 3.22e-63 | 204 |
MS.gene055984.t1 | AT4G21960 | 36.964 | 303 | 177 | 6 | 25 | 323 | 31 | 323 | 9.99e-62 | 200 |
MS.gene055984.t1 | AT3G28200 | 33.871 | 310 | 192 | 4 | 21 | 327 | 17 | 316 | 1.95e-60 | 196 |
MS.gene055984.t1 | AT5G40150 | 34.740 | 308 | 193 | 3 | 21 | 327 | 28 | 328 | 4.30e-58 | 190 |
MS.gene055984.t1 | AT2G37130 | 33.442 | 308 | 192 | 5 | 24 | 327 | 29 | 327 | 1.12e-54 | 181 |
MS.gene055984.t1 | AT2G37130 | 33.663 | 303 | 188 | 5 | 29 | 327 | 3 | 296 | 1.86e-54 | 180 |
MS.gene055984.t1 | AT3G17070 | 34.169 | 319 | 177 | 8 | 25 | 327 | 38 | 339 | 1.23e-50 | 171 |
MS.gene055984.t1 | AT4G25980 | 45.355 | 183 | 95 | 3 | 13 | 195 | 59 | 236 | 2.27e-47 | 161 |
MS.gene055984.t1 | AT5G39580 | 46.939 | 196 | 95 | 6 | 10 | 202 | 7 | 196 | 1.47e-45 | 155 |
MS.gene055984.t1 | AT2G24800 | 40.462 | 173 | 98 | 1 | 23 | 195 | 29 | 196 | 1.75e-36 | 132 |
MS.gene055984.t1 | AT3G17070 | 31.615 | 291 | 165 | 9 | 53 | 327 | 4 | 276 | 1.57e-35 | 130 |
MS.gene055984.t1 | AT4G35970 | 27.734 | 256 | 132 | 10 | 59 | 309 | 33 | 240 | 3.42e-15 | 75.1 |
MS.gene055984.t1 | AT3G42570 | 35.398 | 113 | 71 | 2 | 82 | 193 | 38 | 149 | 1.04e-14 | 70.9 |
MS.gene055984.t1 | AT1G77490 | 26.515 | 264 | 151 | 11 | 59 | 309 | 106 | 339 | 6.46e-14 | 72.4 |
MS.gene055984.t1 | AT1G77490 | 26.515 | 264 | 151 | 11 | 59 | 309 | 106 | 339 | 8.03e-14 | 72.4 |
MS.gene055984.t1 | AT4G35970 | 29.798 | 198 | 91 | 7 | 82 | 275 | 55 | 208 | 4.54e-13 | 68.2 |
MS.gene055984.t1 | AT4G08390 | 24.046 | 262 | 160 | 8 | 59 | 309 | 126 | 359 | 2.04e-12 | 67.8 |
MS.gene055984.t1 | AT4G08390 | 24.046 | 262 | 160 | 8 | 59 | 309 | 127 | 360 | 2.35e-12 | 67.8 |
MS.gene055984.t1 | AT4G08390 | 24.046 | 262 | 160 | 8 | 59 | 309 | 127 | 360 | 2.35e-12 | 67.8 |
MS.gene055984.t1 | AT4G08390 | 24.046 | 262 | 160 | 8 | 59 | 309 | 127 | 360 | 2.35e-12 | 67.8 |
Find 62 sgRNAs with CRISPR-Local
Find 93 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCTCCTTGACTTCCCATTAA+TGG | 0.180025 | 7.1:+14189906 | None:intergenic |
GGGTAATATCAGTCCATTAA+TGG | 0.236886 | 7.1:-14189919 | MS.gene055984:CDS |
AGTGATCTTGTTGCATTATC+TGG | 0.246387 | 7.1:-14190644 | MS.gene055984:intron |
TGCTGAAGCTTCTGTATCTT+TGG | 0.257038 | 7.1:-14191060 | MS.gene055984:intron |
TAAGCCAACAGCAGCAAATT+TGG | 0.265842 | 7.1:+14190673 | None:intergenic |
TCCAATTGTAGGAAAGTTAA+TGG | 0.269235 | 7.1:-14189876 | MS.gene055984:CDS |
AGAAACATTGGGGCATGTTT+TGG | 0.272122 | 7.1:+14191434 | None:intergenic |
TCCATTAACTTTCCTACAAT+TGG | 0.278391 | 7.1:+14189875 | None:intergenic |
TGTGTCTTGTGCTGATATTT+TGG | 0.287910 | 7.1:-14191090 | MS.gene055984:CDS |
GATTATTAGCACTGTGAAAA+TGG | 0.288329 | 7.1:+14191503 | None:intergenic |
TAGTTGTTGTCGAAATTATT+TGG | 0.298058 | 7.1:+14190092 | None:intergenic |
GAATTAGGTGCACATACTTT+TGG | 0.305338 | 7.1:-14190272 | MS.gene055984:intron |
GCTAAGCTTTCAGTTGGATT+AGG | 0.331908 | 7.1:+14190707 | None:intergenic |
CATTAGTGGAAAACAATTCT+TGG | 0.347221 | 7.1:+14190027 | None:intergenic |
CCACGAGCTGAATTATTGTT+AGG | 0.354824 | 7.1:+14191167 | None:intergenic |
CTGAACAGCATTTCTCACTA+TGG | 0.374100 | 7.1:+14191410 | None:intergenic |
TGCAGTCAGGAGGTCCTTCA+TGG | 0.392241 | 7.1:-14190793 | MS.gene055984:intron |
CACTGAAGTTGAATAGTCTT+TGG | 0.398801 | 7.1:+14190225 | None:intergenic |
TCGAAATTATTTGGTGATGA+AGG | 0.400046 | 7.1:+14190101 | None:intergenic |
GGTAATATCAGTCCATTAAT+GGG | 0.424844 | 7.1:-14189918 | MS.gene055984:CDS |
ACCGCCAAATTTGCTGCTGT+TGG | 0.433009 | 7.1:-14190677 | MS.gene055984:CDS |
CTCACTATGGAAGAAACATT+GGG | 0.436946 | 7.1:+14191423 | None:intergenic |
GTTGAATTCAGTGTTGGATC+AGG | 0.449005 | 7.1:+14190191 | None:intergenic |
GATTGTAGCAGCACCATTAG+TGG | 0.460308 | 7.1:+14190013 | None:intergenic |
GAGAAATTAGATCCAATTGT+AGG | 0.464574 | 7.1:-14189887 | MS.gene055984:CDS |
AGCAAATTTGGCGGTGACAT+TGG | 0.471266 | 7.1:+14190685 | None:intergenic |
CGAAATTATTTGGTGATGAA+GGG | 0.477837 | 7.1:+14190102 | None:intergenic |
GATATTACCCATGTTAATCA+TGG | 0.480311 | 7.1:+14189932 | None:intergenic |
GGTCTGATTGCAAACCAATC+TGG | 0.483029 | 7.1:-14190746 | MS.gene055984:CDS |
GCTTTCAGTTGGATTAGGAA+TGG | 0.497949 | 7.1:+14190712 | None:intergenic |
TCTCACTATGGAAGAAACAT+TGG | 0.503003 | 7.1:+14191422 | None:intergenic |
ACATTGGCTAAGCTTTCAGT+TGG | 0.503769 | 7.1:+14190701 | None:intergenic |
AAATCAAGGTCTTCTTCAAA+CGG | 0.509165 | 7.1:-14190051 | MS.gene055984:CDS |
CCTTCATGGAATGTACTACT+TGG | 0.512650 | 7.1:-14190779 | MS.gene055984:CDS |
CTATTCAACTTCAGTGGCAC+AGG | 0.520255 | 7.1:-14190218 | MS.gene055984:CDS |
GAGCATGTGATGGATTAAGA+AGG | 0.529837 | 7.1:+14191478 | None:intergenic |
TGTTCAGTCCATGATTAACA+TGG | 0.539490 | 7.1:-14189940 | MS.gene055984:CDS |
AGATATGTTGAATTCAGTGT+TGG | 0.541731 | 7.1:+14190185 | None:intergenic |
CATGAAACTGAAGACGGGTT+AGG | 0.549547 | 7.1:+14191352 | None:intergenic |
GCCAACAGCAGCAAATTTGG+CGG | 0.551525 | 7.1:+14190676 | None:intergenic |
AAATGTCCACAAAATGGAAG+TGG | 0.559942 | 7.1:-14190146 | MS.gene055984:CDS |
CATGTGATGGATTAAGAAGG+AGG | 0.571412 | 7.1:+14191481 | None:intergenic |
GAGGTTAGTTGAGCATGTGA+TGG | 0.579020 | 7.1:+14191468 | None:intergenic |
GTTCAGTCCATGATTAACAT+GGG | 0.587414 | 7.1:-14189939 | MS.gene055984:CDS |
GGAATGTACTACTTGGCAGA+AGG | 0.592126 | 7.1:-14190772 | MS.gene055984:CDS |
GTACTACTTGGCAGAAGGGA+CGG | 0.592958 | 7.1:-14190767 | MS.gene055984:CDS |
GAATGTACTACTTGGCAGAA+GGG | 0.593239 | 7.1:-14190771 | MS.gene055984:CDS |
GCTTGCAAAGTTGTTAACAA+TGG | 0.593422 | 7.1:+14189989 | None:intergenic |
GCAATCATGAAACTGAAGAC+GGG | 0.594589 | 7.1:+14191347 | None:intergenic |
AGTCCATTAATGGGAAGTCA+AGG | 0.598007 | 7.1:-14189909 | MS.gene055984:CDS |
AGCAATCATGAAACTGAAGA+CGG | 0.599227 | 7.1:+14191346 | None:intergenic |
TGGATGTGTTGGCACCAGAT+TGG | 0.602779 | 7.1:+14190732 | None:intergenic |
CCAAGTAGTACATTCCATGA+AGG | 0.604615 | 7.1:+14190779 | None:intergenic |
GTTAATCATGGACTGAACAA+AGG | 0.607469 | 7.1:+14189944 | None:intergenic |
TGGATTAGGAATGGATGTGT+TGG | 0.616961 | 7.1:+14190721 | None:intergenic |
CAAAGACTATTCAACTTCAG+TGG | 0.618577 | 7.1:-14190224 | MS.gene055984:CDS |
CTGAAGACGGGTTAGGCTCG+CGG | 0.619803 | 7.1:+14191359 | None:intergenic |
CCTAACAATAATTCAGCTCG+TGG | 0.620664 | 7.1:-14191167 | MS.gene055984:CDS |
TCAGCACAAGACACAACAGC+AGG | 0.630251 | 7.1:+14191098 | None:intergenic |
AATGTATATTTGCAGTCAGG+AGG | 0.632669 | 7.1:-14190803 | MS.gene055984:intron |
GTTAGGCTCGCGGTAATACG+AGG | 0.667312 | 7.1:+14191369 | None:intergenic |
TCACTATGGAAGAAACATTG+GGG | 0.713143 | 7.1:+14191424 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TAATTAACTAAATATGAATT+AGG | + | chr7.1:14190362-14190381 | None:intergenic | 10.0% |
!! | AAATTCAAAATTAATGTTTG+CGG | + | chr7.1:14190912-14190931 | None:intergenic | 15.0% |
!!! | TTATTAATTTGTGTATTTCA+GGG | - | chr7.1:14190140-14190159 | MS.gene055984:CDS | 15.0% |
!! | AAAAATCTTCTCAAAAATCA+AGG | - | chr7.1:14191329-14191348 | MS.gene055984:intron | 20.0% |
!! | TAATTAAATTGCATAACCAA+TGG | + | chr7.1:14190510-14190529 | None:intergenic | 20.0% |
!! | TAGCAAACTAATATTTATCA+AGG | - | chr7.1:14190445-14190464 | MS.gene055984:intron | 20.0% |
!!! | GTTATTAATTTGTGTATTTC+AGG | - | chr7.1:14190139-14190158 | MS.gene055984:CDS | 20.0% |
!!! | TTATTGATTTCATTATGTGT+AGG | - | chr7.1:14191051-14191070 | MS.gene055984:intron | 20.0% |
! | AATCCTTAATTGATACTGTA+CGG | + | chr7.1:14190481-14190500 | None:intergenic | 25.0% |
! | GTGAAAATGGAATAAAAAGT+AGG | + | chr7.1:14189881-14189900 | None:intergenic | 25.0% |
! | TAATTTGAGTATGTTGGATT+AGG | - | chr7.1:14190799-14190818 | MS.gene055984:intron | 25.0% |
! | TAGTTGTTGTCGAAATTATT+TGG | + | chr7.1:14191305-14191324 | None:intergenic | 25.0% |
!! | TAACTATTTGTTGACACAAA+TGG | - | chr7.1:14191091-14191110 | MS.gene055984:CDS | 25.0% |
!!! | AGACTTTAATTTGAGTATGT+TGG | - | chr7.1:14190793-14190812 | MS.gene055984:intron | 25.0% |
AAATCAAGGTCTTCTTCAAA+CGG | - | chr7.1:14191343-14191362 | MS.gene055984:CDS | 30.0% | |
AGATATGTTGAATTCAGTGT+TGG | + | chr7.1:14191212-14191231 | None:intergenic | 30.0% | |
ATTAAGGATTATGACACCAT+TGG | - | chr7.1:14190491-14190510 | MS.gene055984:intron | 30.0% | |
ATTTCGACAATTGTATCTGA+TGG | - | chr7.1:14190966-14190985 | MS.gene055984:intron | 30.0% | |
CAAAATTAATGTTTGCGGAA+TGG | + | chr7.1:14190907-14190926 | None:intergenic | 30.0% | |
CAAATGGATCAACTTGAATT+AGG | - | chr7.1:14191107-14191126 | MS.gene055984:CDS | 30.0% | |
CAACAAAAATGTCCACAAAA+TGG | - | chr7.1:14191242-14191261 | MS.gene055984:intron | 30.0% | |
CATAAACTCATGCATTAACT+AGG | - | chr7.1:14190871-14190890 | MS.gene055984:intron | 30.0% | |
CATTAGTGGAAAACAATTCT+TGG | + | chr7.1:14191370-14191389 | None:intergenic | 30.0% | |
GAGAAATTAGATCCAATTGT+AGG | - | chr7.1:14191507-14191526 | MS.gene055984:CDS | 30.0% | |
GATAATGTATATTTGCAGTC+AGG | - | chr7.1:14190588-14190607 | MS.gene055984:intron | 30.0% | |
GATATTACCCATGTTAATCA+TGG | + | chr7.1:14191465-14191484 | None:intergenic | 30.0% | |
GATTATTAGCACTGTGAAAA+TGG | + | chr7.1:14189894-14189913 | None:intergenic | 30.0% | |
GGTAATATCAGTCCATTAAT+GGG | - | chr7.1:14191476-14191495 | MS.gene055984:CDS | 30.0% | |
TCCAATTGTAGGAAAGTTAA+TGG | - | chr7.1:14191518-14191537 | MS.gene055984:CDS | 30.0% | |
TCCATTAACTTTCCTACAAT+TGG | + | chr7.1:14191522-14191541 | None:intergenic | 30.0% | |
TGATTAATGAGCTAGAGTTT+AGG | - | chr7.1:14190097-14190116 | MS.gene055984:CDS | 30.0% | |
! | CAAGAATTGTTTTCCACTAA+TGG | - | chr7.1:14191368-14191387 | MS.gene055984:CDS | 30.0% |
! | CATTTTGTGGACATTTTTGT+TGG | + | chr7.1:14191244-14191263 | None:intergenic | 30.0% |
! | GCATCTCTTTTATTAGATCA+AGG | - | chr7.1:14190170-14190189 | MS.gene055984:CDS | 30.0% |
! | TCTCTTTTATTAGATCAAGG+TGG | - | chr7.1:14190173-14190192 | MS.gene055984:CDS | 30.0% |
!! | CGAAATTATTTGGTGATGAA+GGG | + | chr7.1:14191295-14191314 | None:intergenic | 30.0% |
!! | TCGAAATTATTTGGTGATGA+AGG | + | chr7.1:14191296-14191315 | None:intergenic | 30.0% |
AAATGTCCACAAAATGGAAG+TGG | - | chr7.1:14191248-14191267 | MS.gene055984:intron | 35.0% | |
AATGTATATTTGCAGTCAGG+AGG | - | chr7.1:14190591-14190610 | MS.gene055984:intron | 35.0% | |
AGCAATCATGAAACTGAAGA+CGG | + | chr7.1:14190051-14190070 | None:intergenic | 35.0% | |
AGGCTTCAAAAAAAGCTGTT+TGG | + | chr7.1:14191433-14191452 | None:intergenic | 35.0% | |
AGTGATCTTGTTGCATTATC+TGG | - | chr7.1:14190750-14190769 | MS.gene055984:CDS | 35.0% | |
CAAAGACTATTCAACTTCAG+TGG | - | chr7.1:14191170-14191189 | MS.gene055984:CDS | 35.0% | |
CACTGAAGTTGAATAGTCTT+TGG | + | chr7.1:14191172-14191191 | None:intergenic | 35.0% | |
CTCACTATGGAAGAAACATT+GGG | + | chr7.1:14189974-14189993 | None:intergenic | 35.0% | |
GCTTGCAAAGTTGTTAACAA+TGG | + | chr7.1:14191408-14191427 | None:intergenic | 35.0% | |
GGGTAATATCAGTCCATTAA+TGG | - | chr7.1:14191475-14191494 | MS.gene055984:CDS | 35.0% | |
GTTCAGTCCATGATTAACAT+GGG | - | chr7.1:14191455-14191474 | MS.gene055984:CDS | 35.0% | |
TCACTATGGAAGAAACATTG+GGG | + | chr7.1:14189973-14189992 | None:intergenic | 35.0% | |
TCTCACTATGGAAGAAACAT+TGG | + | chr7.1:14189975-14189994 | None:intergenic | 35.0% | |
TGTCCGTACAGTATCAATTA+AGG | - | chr7.1:14190475-14190494 | MS.gene055984:intron | 35.0% | |
TGTTCAGTCCATGATTAACA+TGG | - | chr7.1:14191454-14191473 | MS.gene055984:CDS | 35.0% | |
! | AGGACATGAATTTTCAACAG+AGG | + | chr7.1:14190279-14190298 | None:intergenic | 35.0% |
! | GAATTAGGTGCACATACTTT+TGG | - | chr7.1:14191122-14191141 | MS.gene055984:CDS | 35.0% |
! | GTTAATCATGGACTGAACAA+AGG | + | chr7.1:14191453-14191472 | None:intergenic | 35.0% |
!! | TGTGTCTTGTGCTGATATTT+TGG | - | chr7.1:14190304-14190323 | MS.gene055984:intron | 35.0% |
!!! | TGTTTTGGAGTAGAATGTTG+AGG | + | chr7.1:14189948-14189967 | None:intergenic | 35.0% |
AGTCCATTAATGGGAAGTCA+AGG | - | chr7.1:14191485-14191504 | MS.gene055984:CDS | 40.0% | |
CCAAGTAGTACATTCCATGA+AGG | + | chr7.1:14190618-14190637 | None:intergenic | 40.0% | |
CCACGAGCTGAATTATTGTT+AGG | + | chr7.1:14190230-14190249 | None:intergenic | 40.0% | |
CCTAACAATAATTCAGCTCG+TGG | - | chr7.1:14190227-14190246 | MS.gene055984:CDS | 40.0% | |
CCTTCATGGAATGTACTACT+TGG | - | chr7.1:14190615-14190634 | MS.gene055984:intron | 40.0% | |
CTGAACAGCATTTCTCACTA+TGG | + | chr7.1:14189987-14190006 | None:intergenic | 40.0% | |
GAATGTACTACTTGGCAGAA+GGG | - | chr7.1:14190623-14190642 | MS.gene055984:intron | 40.0% | |
GCAATCATGAAACTGAAGAC+GGG | + | chr7.1:14190050-14190069 | None:intergenic | 40.0% | |
GCTAAGCTTTCAGTTGGATT+AGG | + | chr7.1:14190690-14190709 | None:intergenic | 40.0% | |
TAAGCCAACAGCAGCAAATT+TGG | + | chr7.1:14190724-14190743 | None:intergenic | 40.0% | |
TCTCCTTGACTTCCCATTAA+TGG | + | chr7.1:14191491-14191510 | None:intergenic | 40.0% | |
TGCTGAAGCTTCTGTATCTT+TGG | - | chr7.1:14190334-14190353 | MS.gene055984:intron | 40.0% | |
TTAGCTAGATGTGTCAAAGC+AGG | + | chr7.1:14190536-14190555 | None:intergenic | 40.0% | |
! | ACATTGGCTAAGCTTTCAGT+TGG | + | chr7.1:14190696-14190715 | None:intergenic | 40.0% |
! | AGAAACATTGGGGCATGTTT+TGG | + | chr7.1:14189963-14189982 | None:intergenic | 40.0% |
! | GCTTTCAGTTGGATTAGGAA+TGG | + | chr7.1:14190685-14190704 | None:intergenic | 40.0% |
! | GTGTTACCACTTCCATTTTG+TGG | + | chr7.1:14191257-14191276 | None:intergenic | 40.0% |
! | GTTGAATTCAGTGTTGGATC+AGG | + | chr7.1:14191206-14191225 | None:intergenic | 40.0% |
! | TGGATTAGGAATGGATGTGT+TGG | + | chr7.1:14190676-14190695 | None:intergenic | 40.0% |
!! | CATGTGATGGATTAAGAAGG+AGG | + | chr7.1:14189916-14189935 | None:intergenic | 40.0% |
!! | GAGCATGTGATGGATTAAGA+AGG | + | chr7.1:14189919-14189938 | None:intergenic | 40.0% |
AGCAAATTTGGCGGTGACAT+TGG | + | chr7.1:14190712-14190731 | None:intergenic | 45.0% | |
CTATTCAACTTCAGTGGCAC+AGG | - | chr7.1:14191176-14191195 | MS.gene055984:CDS | 45.0% | |
GATTGTAGCAGCACCATTAG+TGG | + | chr7.1:14191384-14191403 | None:intergenic | 45.0% | |
GGAATGTACTACTTGGCAGA+AGG | - | chr7.1:14190622-14190641 | MS.gene055984:intron | 45.0% | |
GGTCTGATTGCAAACCAATC+TGG | - | chr7.1:14190648-14190667 | MS.gene055984:CDS | 45.0% | |
! | CATGAAACTGAAGACGGGTT+AGG | + | chr7.1:14190045-14190064 | None:intergenic | 45.0% |
! | GAGGTTAGTTGAGCATGTGA+TGG | + | chr7.1:14189929-14189948 | None:intergenic | 45.0% |
GCCAACAGCAGCAAATTTGG+CGG | + | chr7.1:14190721-14190740 | None:intergenic | 50.0% | |
GTACTACTTGGCAGAAGGGA+CGG | - | chr7.1:14190627-14190646 | MS.gene055984:intron | 50.0% | |
TCAGCACAAGACACAACAGC+AGG | + | chr7.1:14190299-14190318 | None:intergenic | 50.0% | |
! | TGGATGTGTTGGCACCAGAT+TGG | + | chr7.1:14190665-14190684 | None:intergenic | 50.0% |
!! | ACCGCCAAATTTGCTGCTGT+TGG | - | chr7.1:14190717-14190736 | MS.gene055984:CDS | 50.0% |
GTTAGGCTCGCGGTAATACG+AGG | + | chr7.1:14190028-14190047 | None:intergenic | 55.0% | |
TGCAGTCAGGAGGTCCTTCA+TGG | - | chr7.1:14190601-14190620 | MS.gene055984:intron | 55.0% | |
!! | CTGAAGACGGGTTAGGCTCG+CGG | + | chr7.1:14190038-14190057 | None:intergenic | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.1 | gene | 14189869 | 14191547 | 14189869 | ID=MS.gene055984 |
chr7.1 | mRNA | 14189869 | 14191547 | 14189869 | ID=MS.gene055984.t1;Parent=MS.gene055984 |
chr7.1 | exon | 14191338 | 14191547 | 14191338 | ID=MS.gene055984.t1.exon1;Parent=MS.gene055984.t1 |
chr7.1 | CDS | 14191338 | 14191547 | 14191338 | ID=cds.MS.gene055984.t1;Parent=MS.gene055984.t1 |
chr7.1 | exon | 14191061 | 14191255 | 14191061 | ID=MS.gene055984.t1.exon2;Parent=MS.gene055984.t1 |
chr7.1 | CDS | 14191061 | 14191255 | 14191061 | ID=cds.MS.gene055984.t1;Parent=MS.gene055984.t1 |
chr7.1 | exon | 14190645 | 14190810 | 14190645 | ID=MS.gene055984.t1.exon3;Parent=MS.gene055984.t1 |
chr7.1 | CDS | 14190645 | 14190810 | 14190645 | ID=cds.MS.gene055984.t1;Parent=MS.gene055984.t1 |
chr7.1 | exon | 14189869 | 14190287 | 14189869 | ID=MS.gene055984.t1.exon4;Parent=MS.gene055984.t1 |
chr7.1 | CDS | 14189869 | 14190287 | 14189869 | ID=cds.MS.gene055984.t1;Parent=MS.gene055984.t1 |
Gene Sequence |
Protein sequence |