Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene04636.t1 | XP_003625275.2 | 96.7 | 329 | 11 | 0 | 1 | 329 | 1 | 329 | 1.10E-174 | 622.5 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene04636.t1 | Q9LEH3 | 72.1 | 326 | 89 | 1 | 2 | 327 | 4 | 327 | 8.1e-129 | 461.5 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene04636.t1 | G7KVF1 | 96.7 | 329 | 11 | 0 | 1 | 329 | 45 | 373 | 8.2e-175 | 622.5 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene001264 | MS.gene04636 | PPI |
MS.gene04636 | MS.gene041122 | PPI |
MS.gene04636 | MS.gene60708 | PPI |
MS.gene047667 | MS.gene04636 | PPI |
MS.gene61089 | MS.gene04636 | PPI |
MS.gene006133 | MS.gene04636 | PPI |
MS.gene71395 | MS.gene04636 | PPI |
MS.gene24862 | MS.gene04636 | PPI |
MS.gene04636 | MS.gene006132 | PPI |
MS.gene04636 | MS.gene032194 | PPI |
MS.gene041124 | MS.gene04636 | PPI |
MS.gene051996 | MS.gene04636 | PPI |
MS.gene025145 | MS.gene04636 | PPI |
MS.gene85260 | MS.gene04636 | PPI |
MS.gene04636 | MS.gene71393 | PPI |
MS.gene012254 | MS.gene04636 | PPI |
MS.gene04636 | MS.gene051232 | PPI |
MS.gene047665 | MS.gene04636 | PPI |
MS.gene052951 | MS.gene04636 | PPI |
MS.gene04636 | MS.gene85778 | PPI |
MS.gene051844 | MS.gene04636 | PPI |
MS.gene04636 | MS.gene010392 | PPI |
MS.gene04636 | MS.gene012253 | PPI |
MS.gene88899 | MS.gene04636 | PPI |
MS.gene04636 | MS.gene010390 | PPI |
MS.gene04636 | MS.gene026111 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene04636.t1 | MTR_7g093370 | 96.657 | 329 | 11 | 0 | 1 | 329 | 45 | 373 | 0.0 | 647 |
MS.gene04636.t1 | MTR_1g054205 | 75.684 | 329 | 79 | 1 | 1 | 329 | 1 | 328 | 0.0 | 507 |
MS.gene04636.t1 | MTR_2g029815 | 62.338 | 308 | 115 | 1 | 20 | 327 | 24 | 330 | 1.82e-135 | 389 |
MS.gene04636.t1 | MTR_2g029820 | 59.609 | 307 | 123 | 1 | 21 | 327 | 25 | 330 | 1.16e-131 | 379 |
MS.gene04636.t1 | MTR_2g029830 | 60.912 | 307 | 119 | 1 | 21 | 327 | 24 | 329 | 3.57e-131 | 378 |
MS.gene04636.t1 | MTR_2g029800 | 56.707 | 328 | 139 | 2 | 2 | 327 | 4 | 330 | 1.18e-129 | 374 |
MS.gene04636.t1 | MTR_2g029860 | 60.390 | 308 | 121 | 1 | 21 | 328 | 25 | 331 | 1.56e-128 | 371 |
MS.gene04636.t1 | MTR_2g029750 | 58.958 | 307 | 125 | 1 | 21 | 327 | 25 | 330 | 9.97e-127 | 367 |
MS.gene04636.t1 | MTR_2g028980 | 57.585 | 323 | 136 | 1 | 5 | 327 | 9 | 330 | 1.58e-126 | 366 |
MS.gene04636.t1 | MTR_2g029850 | 57.143 | 329 | 138 | 2 | 2 | 328 | 4 | 331 | 2.07e-126 | 366 |
MS.gene04636.t1 | MTR_2g029560 | 57.827 | 313 | 131 | 1 | 16 | 328 | 15 | 326 | 5.66e-126 | 364 |
MS.gene04636.t1 | MTR_2g029740 | 57.980 | 307 | 128 | 1 | 21 | 327 | 25 | 330 | 4.40e-125 | 362 |
MS.gene04636.t1 | MTR_4g125940 | 54.878 | 328 | 143 | 2 | 2 | 327 | 5 | 329 | 6.49e-123 | 356 |
MS.gene04636.t1 | MTR_2g040000 | 54.321 | 324 | 142 | 2 | 7 | 327 | 11 | 331 | 6.65e-122 | 353 |
MS.gene04636.t1 | MTR_2g029910 | 55.623 | 329 | 142 | 3 | 2 | 327 | 5 | 332 | 2.00e-121 | 353 |
MS.gene04636.t1 | MTR_2g029730 | 56.869 | 313 | 134 | 1 | 16 | 328 | 16 | 327 | 1.72e-120 | 350 |
MS.gene04636.t1 | MTR_3g094650 | 54.462 | 325 | 134 | 6 | 5 | 327 | 10 | 322 | 1.49e-117 | 342 |
MS.gene04636.t1 | MTR_5g021060 | 52.805 | 303 | 141 | 2 | 25 | 327 | 30 | 330 | 2.58e-113 | 332 |
MS.gene04636.t1 | MTR_3g094670 | 54.517 | 321 | 134 | 5 | 9 | 327 | 12 | 322 | 3.92e-113 | 331 |
MS.gene04636.t1 | MTR_5g017850 | 52.500 | 320 | 147 | 4 | 9 | 327 | 11 | 326 | 2.69e-110 | 324 |
MS.gene04636.t1 | MTR_4g125940 | 58.696 | 276 | 109 | 2 | 54 | 327 | 2 | 274 | 7.15e-110 | 321 |
MS.gene04636.t1 | MTR_3g094630 | 53.894 | 321 | 136 | 5 | 9 | 327 | 12 | 322 | 7.49e-110 | 323 |
MS.gene04636.t1 | MTR_8g076820 | 51.485 | 303 | 145 | 2 | 25 | 327 | 30 | 330 | 2.51e-108 | 319 |
MS.gene04636.t1 | MTR_2g029830 | 60.311 | 257 | 101 | 1 | 71 | 327 | 6 | 261 | 3.48e-107 | 315 |
MS.gene04636.t1 | MTR_5g017860 | 50.938 | 320 | 152 | 4 | 9 | 327 | 11 | 326 | 6.04e-107 | 315 |
MS.gene04636.t1 | MTR_3g072190 | 51.645 | 304 | 137 | 3 | 24 | 327 | 25 | 318 | 1.97e-105 | 311 |
MS.gene04636.t1 | MTR_5g083860 | 48.750 | 320 | 152 | 5 | 10 | 327 | 16 | 325 | 1.16e-104 | 310 |
MS.gene04636.t1 | MTR_3g466200 | 50.000 | 328 | 150 | 7 | 3 | 327 | 4 | 320 | 1.82e-104 | 309 |
MS.gene04636.t1 | MTR_2g084080 | 48.308 | 325 | 156 | 4 | 5 | 327 | 3 | 317 | 6.22e-104 | 307 |
MS.gene04636.t1 | MTR_2g084000 | 47.059 | 323 | 160 | 4 | 6 | 327 | 7 | 319 | 3.33e-101 | 300 |
MS.gene04636.t1 | MTR_4g029170 | 47.734 | 331 | 159 | 6 | 1 | 327 | 1 | 321 | 4.01e-101 | 300 |
MS.gene04636.t1 | MTR_2g084020 | 48.000 | 325 | 158 | 4 | 5 | 327 | 3 | 318 | 4.52e-101 | 300 |
MS.gene04636.t1 | MTR_4g083710 | 48.287 | 321 | 155 | 4 | 10 | 327 | 12 | 324 | 4.52e-101 | 300 |
MS.gene04636.t1 | MTR_2g084110 | 48.773 | 326 | 153 | 5 | 5 | 327 | 3 | 317 | 2.72e-100 | 298 |
MS.gene04636.t1 | MTR_2g084010 | 48.308 | 325 | 157 | 4 | 5 | 327 | 3 | 318 | 4.12e-100 | 298 |
MS.gene04636.t1 | MTR_5g074970 | 47.678 | 323 | 153 | 6 | 10 | 327 | 15 | 326 | 2.56e-99 | 296 |
MS.gene04636.t1 | MTR_7g072510 | 45.455 | 319 | 164 | 3 | 9 | 327 | 4 | 312 | 9.82e-98 | 291 |
MS.gene04636.t1 | MTR_2g084090 | 47.239 | 326 | 159 | 5 | 5 | 327 | 3 | 318 | 1.18e-97 | 291 |
MS.gene04636.t1 | MTR_1g022970 | 47.855 | 303 | 157 | 1 | 25 | 327 | 46 | 347 | 3.50e-96 | 289 |
MS.gene04636.t1 | MTR_4g029200 | 45.741 | 317 | 162 | 3 | 11 | 327 | 32 | 338 | 5.46e-95 | 285 |
MS.gene04636.t1 | MTR_5g074740 | 45.370 | 324 | 165 | 5 | 7 | 327 | 7 | 321 | 3.20e-94 | 283 |
MS.gene04636.t1 | MTR_5g074760 | 45.062 | 324 | 166 | 5 | 7 | 327 | 7 | 321 | 3.69e-94 | 283 |
MS.gene04636.t1 | MTR_4g074995 | 47.368 | 323 | 142 | 6 | 10 | 327 | 9 | 308 | 9.05e-94 | 281 |
MS.gene04636.t1 | MTR_1g115900 | 44.444 | 324 | 167 | 6 | 6 | 327 | 9 | 321 | 1.18e-93 | 281 |
MS.gene04636.t1 | MTR_5g074860 | 45.679 | 324 | 164 | 5 | 6 | 326 | 10 | 324 | 1.94e-93 | 281 |
MS.gene04636.t1 | MTR_5g014100 | 47.557 | 307 | 156 | 3 | 25 | 327 | 26 | 331 | 2.80e-93 | 281 |
MS.gene04636.t1 | MTR_4g030890 | 45.928 | 307 | 160 | 4 | 21 | 327 | 96 | 396 | 4.76e-93 | 283 |
MS.gene04636.t1 | MTR_4g031140 | 43.653 | 323 | 171 | 5 | 11 | 328 | 9 | 325 | 6.61e-93 | 280 |
MS.gene04636.t1 | MTR_5g074710 | 45.171 | 321 | 164 | 5 | 10 | 327 | 10 | 321 | 7.91e-93 | 279 |
MS.gene04636.t1 | MTR_7g072480 | 46.519 | 316 | 159 | 3 | 12 | 327 | 11 | 316 | 6.84e-92 | 276 |
MS.gene04636.t1 | MTR_4g029180 | 47.508 | 301 | 146 | 5 | 29 | 327 | 31 | 321 | 7.85e-92 | 276 |
MS.gene04636.t1 | MTR_4g122640 | 45.875 | 303 | 160 | 3 | 25 | 327 | 38 | 336 | 1.75e-91 | 276 |
MS.gene04636.t1 | MTR_3g466180 | 44.828 | 319 | 166 | 3 | 9 | 327 | 15 | 323 | 8.75e-90 | 271 |
MS.gene04636.t1 | MTR_4g046713 | 42.073 | 328 | 185 | 4 | 1 | 327 | 3 | 326 | 1.85e-89 | 271 |
MS.gene04636.t1 | MTR_3g467600 | 43.692 | 325 | 172 | 4 | 6 | 327 | 8 | 324 | 5.53e-88 | 267 |
MS.gene04636.t1 | MTR_2g088770 | 44.237 | 321 | 171 | 6 | 10 | 327 | 10 | 325 | 6.86e-88 | 267 |
MS.gene04636.t1 | MTR_3g092990 | 42.462 | 325 | 177 | 4 | 7 | 327 | 8 | 326 | 5.39e-87 | 265 |
MS.gene04636.t1 | MTR_3g072190 | 51.154 | 260 | 117 | 3 | 68 | 327 | 2 | 251 | 6.98e-87 | 261 |
MS.gene04636.t1 | MTR_4g074990 | 44.548 | 321 | 151 | 4 | 10 | 327 | 9 | 305 | 1.30e-86 | 263 |
MS.gene04636.t1 | MTR_4g114210 | 45.031 | 322 | 161 | 7 | 13 | 327 | 8 | 320 | 1.47e-86 | 263 |
MS.gene04636.t1 | MTR_5g049280 | 41.667 | 336 | 183 | 8 | 1 | 327 | 6 | 337 | 3.28e-86 | 263 |
MS.gene04636.t1 | MTR_7g107520 | 43.653 | 323 | 174 | 6 | 6 | 327 | 5 | 320 | 4.96e-85 | 259 |
MS.gene04636.t1 | MTR_7g086820 | 43.934 | 305 | 161 | 6 | 23 | 327 | 18 | 312 | 8.77e-85 | 258 |
MS.gene04636.t1 | MTR_4g029190 | 43.910 | 312 | 167 | 4 | 16 | 327 | 37 | 340 | 1.00e-83 | 256 |
MS.gene04636.t1 | MTR_0155s0040 | 43.648 | 307 | 155 | 8 | 23 | 327 | 25 | 315 | 4.39e-82 | 251 |
MS.gene04636.t1 | MTR_6g027440 | 43.438 | 320 | 171 | 8 | 9 | 327 | 4 | 314 | 4.54e-81 | 249 |
MS.gene04636.t1 | MTR_2g008710 | 42.342 | 333 | 178 | 7 | 1 | 327 | 1 | 325 | 2.57e-80 | 247 |
MS.gene04636.t1 | MTR_5g022870 | 41.433 | 321 | 177 | 8 | 8 | 327 | 6 | 316 | 4.39e-80 | 246 |
MS.gene04636.t1 | MTR_1g009750 | 41.994 | 331 | 185 | 5 | 1 | 327 | 1 | 328 | 5.40e-80 | 246 |
MS.gene04636.t1 | MTR_1g101830 | 40.615 | 325 | 179 | 7 | 4 | 327 | 11 | 322 | 9.80e-80 | 246 |
MS.gene04636.t1 | MTR_2g099175 | 41.424 | 309 | 168 | 6 | 24 | 327 | 35 | 335 | 2.15e-79 | 245 |
MS.gene04636.t1 | MTR_7g026990 | 40.867 | 323 | 179 | 5 | 7 | 328 | 12 | 323 | 5.78e-79 | 244 |
MS.gene04636.t1 | MTR_1g077000 | 40.557 | 323 | 178 | 6 | 5 | 327 | 19 | 327 | 6.19e-79 | 244 |
MS.gene04636.t1 | MTR_8g075100 | 42.763 | 304 | 163 | 8 | 25 | 327 | 26 | 319 | 4.18e-78 | 241 |
MS.gene04636.t1 | MTR_4g074980 | 42.633 | 319 | 149 | 6 | 10 | 327 | 9 | 294 | 1.02e-76 | 237 |
MS.gene04636.t1 | MTR_3g092990 | 40.615 | 325 | 172 | 5 | 7 | 327 | 8 | 315 | 3.60e-76 | 236 |
MS.gene04636.t1 | MTR_6g043280 | 40.179 | 336 | 178 | 8 | 2 | 327 | 10 | 332 | 4.78e-76 | 237 |
MS.gene04636.t1 | MTR_4g133800 | 41.806 | 299 | 162 | 6 | 30 | 327 | 46 | 333 | 4.23e-75 | 234 |
MS.gene04636.t1 | MTR_2g437770 | 41.830 | 306 | 163 | 9 | 25 | 328 | 50 | 342 | 4.87e-75 | 234 |
MS.gene04636.t1 | MTR_4g127670 | 42.532 | 308 | 166 | 4 | 24 | 327 | 23 | 323 | 4.00e-74 | 231 |
MS.gene04636.t1 | MTR_1g025980 | 40.506 | 316 | 178 | 7 | 9 | 323 | 8 | 314 | 6.31e-74 | 231 |
MS.gene04636.t1 | MTR_5g074860 | 40.923 | 325 | 141 | 6 | 6 | 327 | 10 | 286 | 1.10e-73 | 229 |
MS.gene04636.t1 | MTR_7g029030 | 40.252 | 318 | 179 | 5 | 12 | 327 | 12 | 320 | 2.73e-73 | 229 |
MS.gene04636.t1 | MTR_4g087965 | 38.235 | 340 | 188 | 7 | 3 | 323 | 6 | 342 | 4.50e-73 | 229 |
MS.gene04636.t1 | MTR_1g086320 | 39.940 | 333 | 186 | 7 | 6 | 327 | 4 | 333 | 8.94e-73 | 228 |
MS.gene04636.t1 | MTR_4g074980 | 46.825 | 252 | 123 | 4 | 10 | 257 | 9 | 253 | 9.70e-73 | 226 |
MS.gene04636.t1 | MTR_1g038680 | 40.594 | 303 | 173 | 5 | 29 | 327 | 33 | 332 | 9.14e-72 | 226 |
MS.gene04636.t1 | MTR_2g067440 | 38.507 | 335 | 171 | 7 | 25 | 329 | 60 | 389 | 2.76e-71 | 226 |
MS.gene04636.t1 | MTR_1g086490 | 39.118 | 340 | 186 | 8 | 6 | 327 | 4 | 340 | 6.04e-71 | 224 |
MS.gene04636.t1 | MTR_7g086870 | 40.196 | 306 | 168 | 7 | 23 | 327 | 20 | 311 | 9.33e-71 | 223 |
MS.gene04636.t1 | MTR_6g043240 | 40.708 | 339 | 170 | 10 | 5 | 328 | 10 | 332 | 1.31e-70 | 223 |
MS.gene04636.t1 | MTR_4g095450 | 40.810 | 321 | 175 | 7 | 9 | 323 | 9 | 320 | 1.55e-70 | 222 |
MS.gene04636.t1 | MTR_5g016010 | 38.438 | 320 | 189 | 5 | 8 | 323 | 10 | 325 | 1.71e-70 | 222 |
MS.gene04636.t1 | MTR_2g078610 | 38.138 | 333 | 172 | 6 | 25 | 326 | 76 | 405 | 1.87e-70 | 224 |
MS.gene04636.t1 | MTR_2g077990 | 38.138 | 333 | 172 | 6 | 25 | 326 | 76 | 405 | 3.04e-70 | 224 |
MS.gene04636.t1 | MTR_1g009750 | 39.514 | 329 | 179 | 6 | 1 | 327 | 1 | 311 | 1.12e-69 | 219 |
MS.gene04636.t1 | MTR_1g090760 | 36.585 | 328 | 204 | 3 | 2 | 327 | 5 | 330 | 4.08e-69 | 219 |
MS.gene04636.t1 | MTR_2g008160 | 39.365 | 315 | 178 | 7 | 18 | 327 | 17 | 323 | 9.91e-69 | 218 |
MS.gene04636.t1 | MTR_2g008730 | 39.692 | 325 | 158 | 7 | 9 | 327 | 9 | 301 | 1.86e-66 | 211 |
MS.gene04636.t1 | MTR_8g062780 | 37.383 | 321 | 196 | 4 | 9 | 327 | 7 | 324 | 1.46e-65 | 209 |
MS.gene04636.t1 | MTR_2g078280 | 37.931 | 319 | 164 | 6 | 25 | 312 | 76 | 391 | 2.40e-65 | 211 |
MS.gene04636.t1 | MTR_5g033470 | 36.218 | 312 | 191 | 5 | 21 | 327 | 69 | 377 | 3.32e-63 | 205 |
MS.gene04636.t1 | MTR_2g067450 | 38.511 | 309 | 173 | 6 | 25 | 326 | 11 | 309 | 1.76e-62 | 201 |
MS.gene04636.t1 | MTR_2g029880 | 54.211 | 190 | 77 | 2 | 138 | 327 | 9 | 188 | 2.61e-62 | 197 |
MS.gene04636.t1 | MTR_3g105790 | 37.578 | 322 | 190 | 5 | 9 | 327 | 9 | 322 | 4.14e-62 | 201 |
MS.gene04636.t1 | MTR_1g066710 | 36.570 | 309 | 184 | 6 | 23 | 328 | 25 | 324 | 5.88e-62 | 200 |
MS.gene04636.t1 | MTR_6g043460 | 37.705 | 305 | 178 | 6 | 20 | 323 | 31 | 324 | 1.49e-59 | 195 |
MS.gene04636.t1 | MTR_0286s0010 | 35.962 | 317 | 195 | 5 | 14 | 327 | 23 | 334 | 1.94e-59 | 194 |
MS.gene04636.t1 | MTR_6g008075 | 35.962 | 317 | 195 | 5 | 14 | 327 | 23 | 334 | 1.94e-59 | 194 |
MS.gene04636.t1 | MTR_0147s0010 | 34.161 | 322 | 175 | 5 | 25 | 326 | 77 | 381 | 3.46e-59 | 195 |
MS.gene04636.t1 | MTR_1g066380 | 35.922 | 309 | 186 | 6 | 23 | 328 | 25 | 324 | 8.71e-59 | 192 |
MS.gene04636.t1 | MTR_1g066640 | 36.246 | 309 | 185 | 6 | 23 | 328 | 25 | 324 | 3.26e-58 | 191 |
MS.gene04636.t1 | MTR_1g066680 | 36.102 | 313 | 187 | 7 | 19 | 328 | 21 | 323 | 3.68e-58 | 190 |
MS.gene04636.t1 | MTR_4g132490 | 35.410 | 305 | 191 | 4 | 24 | 327 | 28 | 327 | 3.56e-57 | 188 |
MS.gene04636.t1 | MTR_4g132110 | 35.314 | 303 | 182 | 6 | 25 | 323 | 32 | 324 | 1.16e-56 | 187 |
MS.gene04636.t1 | MTR_4g132110 | 36.039 | 308 | 178 | 8 | 25 | 323 | 32 | 329 | 7.16e-56 | 185 |
MS.gene04636.t1 | MTR_2g008160 | 34.603 | 315 | 158 | 7 | 18 | 327 | 17 | 288 | 1.25e-51 | 172 |
MS.gene04636.t1 | MTR_3g072210 | 46.354 | 192 | 94 | 3 | 137 | 327 | 55 | 238 | 1.64e-51 | 171 |
MS.gene04636.t1 | MTR_5g074700 | 40.948 | 232 | 112 | 5 | 99 | 327 | 5 | 214 | 3.31e-50 | 166 |
MS.gene04636.t1 | MTR_1g066380 | 36.122 | 263 | 156 | 6 | 69 | 328 | 3 | 256 | 3.82e-47 | 160 |
MS.gene04636.t1 | MTR_2g008160 | 43.678 | 174 | 93 | 3 | 18 | 191 | 17 | 185 | 6.12e-43 | 147 |
MS.gene04636.t1 | MTR_3g105790 | 35.857 | 251 | 151 | 4 | 80 | 327 | 3 | 246 | 2.26e-39 | 139 |
MS.gene04636.t1 | MTR_3g072260 | 54.198 | 131 | 52 | 2 | 10 | 133 | 4 | 133 | 2.49e-38 | 133 |
MS.gene04636.t1 | MTR_7g072490 | 37.600 | 250 | 92 | 5 | 71 | 320 | 2 | 187 | 2.78e-36 | 130 |
MS.gene04636.t1 | MTR_2g077980 | 29.856 | 278 | 151 | 7 | 88 | 326 | 11 | 283 | 1.08e-34 | 128 |
MS.gene04636.t1 | MTR_2g078560 | 31.364 | 220 | 118 | 4 | 135 | 323 | 99 | 316 | 9.03e-32 | 121 |
MS.gene04636.t1 | MTR_7g086790 | 35.789 | 190 | 99 | 5 | 72 | 261 | 17 | 183 | 1.97e-26 | 103 |
MS.gene04636.t1 | MTR_5g058120 | 38.272 | 162 | 87 | 3 | 162 | 323 | 7 | 155 | 4.54e-25 | 102 |
MS.gene04636.t1 | MTR_4g031040 | 34.483 | 174 | 70 | 3 | 86 | 259 | 2 | 131 | 5.73e-22 | 90.1 |
MS.gene04636.t1 | MTR_3g462850 | 36.620 | 142 | 85 | 5 | 190 | 327 | 9 | 149 | 7.23e-21 | 87.8 |
MS.gene04636.t1 | MTR_1g098320 | 50.000 | 76 | 36 | 1 | 248 | 323 | 47 | 120 | 6.72e-20 | 84.7 |
MS.gene04636.t1 | MTR_6g048160 | 56.944 | 72 | 26 | 2 | 64 | 135 | 22 | 88 | 2.25e-18 | 79.3 |
MS.gene04636.t1 | MTR_5g074770 | 40.860 | 93 | 54 | 1 | 234 | 326 | 17 | 108 | 1.15e-17 | 77.8 |
MS.gene04636.t1 | MTR_4g114220 | 48.235 | 85 | 33 | 2 | 51 | 135 | 29 | 102 | 4.77e-17 | 77.0 |
MS.gene04636.t1 | MTR_1g089005 | 38.655 | 119 | 65 | 3 | 25 | 137 | 15 | 131 | 5.61e-16 | 74.7 |
MS.gene04636.t1 | MTR_2g029930 | 45.631 | 103 | 27 | 4 | 21 | 109 | 15 | 102 | 9.05e-16 | 72.4 |
MS.gene04636.t1 | MTR_7g086810 | 32.520 | 123 | 56 | 1 | 21 | 143 | 2 | 97 | 1.50e-15 | 75.1 |
MS.gene04636.t1 | MTR_7g086785 | 34.074 | 135 | 87 | 2 | 71 | 205 | 4 | 136 | 4.10e-14 | 68.9 |
MS.gene04636.t1 | MTR_7g107500 | 46.429 | 84 | 42 | 2 | 244 | 327 | 17 | 97 | 5.71e-14 | 67.4 |
MS.gene04636.t1 | MTR_4g012865 | 43.478 | 69 | 38 | 1 | 25 | 93 | 77 | 144 | 1.42e-13 | 67.8 |
MS.gene04636.t1 | MTR_3g088160 | 28.000 | 200 | 110 | 6 | 119 | 309 | 180 | 354 | 1.64e-13 | 71.2 |
MS.gene04636.t1 | MTR_3g088160 | 28.000 | 200 | 110 | 6 | 119 | 309 | 180 | 354 | 2.29e-13 | 70.9 |
MS.gene04636.t1 | MTR_3g107060 | 26.275 | 255 | 137 | 8 | 57 | 308 | 106 | 312 | 6.94e-13 | 68.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene04636.t1 | AT5G06720 | 70.303 | 330 | 93 | 2 | 4 | 329 | 7 | 335 | 1.90e-167 | 469 |
MS.gene04636.t1 | AT5G06730 | 67.901 | 324 | 101 | 2 | 7 | 328 | 13 | 335 | 2.24e-158 | 447 |
MS.gene04636.t1 | AT2G38380 | 56.024 | 332 | 139 | 5 | 2 | 327 | 3 | 333 | 1.83e-125 | 363 |
MS.gene04636.t1 | AT2G38390 | 55.844 | 308 | 134 | 2 | 21 | 327 | 27 | 333 | 1.63e-123 | 358 |
MS.gene04636.t1 | AT5G19880 | 55.663 | 309 | 135 | 2 | 21 | 327 | 21 | 329 | 4.25e-122 | 354 |
MS.gene04636.t1 | AT4G08780 | 54.693 | 309 | 137 | 3 | 21 | 327 | 20 | 327 | 2.95e-121 | 352 |
MS.gene04636.t1 | AT3G32980 | 54.955 | 333 | 142 | 5 | 2 | 327 | 3 | 334 | 3.03e-121 | 353 |
MS.gene04636.t1 | AT4G08770 | 54.369 | 309 | 138 | 3 | 21 | 327 | 20 | 327 | 1.88e-118 | 345 |
MS.gene04636.t1 | AT3G49110 | 54.154 | 325 | 141 | 4 | 10 | 327 | 13 | 336 | 5.04e-118 | 345 |
MS.gene04636.t1 | AT5G19890 | 54.103 | 329 | 140 | 5 | 1 | 327 | 8 | 327 | 5.76e-118 | 343 |
MS.gene04636.t1 | AT3G49120 | 53.846 | 325 | 145 | 4 | 7 | 327 | 12 | 335 | 1.02e-117 | 344 |
MS.gene04636.t1 | AT2G18140 | 53.156 | 301 | 139 | 2 | 29 | 329 | 39 | 337 | 4.95e-114 | 334 |
MS.gene04636.t1 | AT2G18150 | 53.821 | 301 | 137 | 2 | 29 | 329 | 40 | 338 | 7.02e-114 | 333 |
MS.gene04636.t1 | AT5G66390 | 51.792 | 307 | 146 | 2 | 21 | 327 | 29 | 333 | 1.03e-113 | 333 |
MS.gene04636.t1 | AT4G36430 | 53.115 | 305 | 141 | 2 | 23 | 327 | 28 | 330 | 2.45e-113 | 332 |
MS.gene04636.t1 | AT3G50990 | 50.814 | 307 | 149 | 2 | 21 | 327 | 37 | 341 | 8.60e-109 | 321 |
MS.gene04636.t1 | AT5G05340 | 50.974 | 308 | 139 | 5 | 22 | 327 | 27 | 324 | 2.67e-104 | 308 |
MS.gene04636.t1 | AT1G44970 | 50.000 | 306 | 152 | 1 | 22 | 327 | 42 | 346 | 4.87e-101 | 301 |
MS.gene04636.t1 | AT1G49570 | 49.338 | 302 | 147 | 4 | 25 | 323 | 48 | 346 | 3.97e-99 | 296 |
MS.gene04636.t1 | AT2G35380 | 50.489 | 307 | 147 | 4 | 25 | 327 | 30 | 335 | 2.72e-97 | 291 |
MS.gene04636.t1 | AT1G14550 | 45.342 | 322 | 167 | 4 | 7 | 327 | 8 | 321 | 1.54e-96 | 289 |
MS.gene04636.t1 | AT5G58390 | 48.758 | 322 | 152 | 6 | 9 | 327 | 5 | 316 | 9.61e-96 | 286 |
MS.gene04636.t1 | AT5G58400 | 47.205 | 322 | 157 | 6 | 9 | 327 | 14 | 325 | 1.55e-94 | 284 |
MS.gene04636.t1 | AT1G14540 | 45.652 | 322 | 165 | 4 | 8 | 327 | 2 | 315 | 2.04e-94 | 283 |
MS.gene04636.t1 | AT2G22420 | 43.574 | 319 | 174 | 4 | 9 | 327 | 7 | 319 | 1.89e-92 | 278 |
MS.gene04636.t1 | AT5G17820 | 44.340 | 318 | 163 | 6 | 11 | 327 | 9 | 313 | 4.65e-91 | 275 |
MS.gene04636.t1 | AT5G17820 | 44.340 | 318 | 163 | 6 | 11 | 327 | 62 | 366 | 6.24e-90 | 273 |
MS.gene04636.t1 | AT3G03670 | 45.938 | 320 | 167 | 4 | 10 | 327 | 6 | 321 | 7.47e-90 | 271 |
MS.gene04636.t1 | AT1G68850 | 44.051 | 311 | 161 | 8 | 25 | 327 | 30 | 335 | 8.74e-89 | 270 |
MS.gene04636.t1 | AT4G16270 | 45.333 | 300 | 158 | 5 | 29 | 327 | 54 | 348 | 6.51e-87 | 265 |
MS.gene04636.t1 | AT5G64120 | 46.488 | 299 | 151 | 6 | 29 | 327 | 39 | 328 | 8.31e-86 | 261 |
MS.gene04636.t1 | AT3G21770 | 43.450 | 313 | 168 | 6 | 14 | 323 | 18 | 324 | 1.74e-85 | 261 |
MS.gene04636.t1 | AT2G18980 | 44.000 | 325 | 170 | 5 | 7 | 327 | 7 | 323 | 3.50e-85 | 260 |
MS.gene04636.t1 | AT4G11290 | 43.034 | 323 | 178 | 5 | 8 | 327 | 7 | 326 | 1.40e-84 | 258 |
MS.gene04636.t1 | AT2G41480 | 42.813 | 327 | 173 | 7 | 7 | 327 | 10 | 328 | 4.35e-84 | 257 |
MS.gene04636.t1 | AT1G05260 | 42.138 | 318 | 175 | 6 | 13 | 327 | 14 | 325 | 1.41e-83 | 256 |
MS.gene04636.t1 | AT5G39580 | 46.273 | 322 | 160 | 9 | 10 | 327 | 7 | 319 | 6.29e-83 | 254 |
MS.gene04636.t1 | AT3G01190 | 41.325 | 317 | 178 | 6 | 12 | 327 | 12 | 321 | 7.39e-81 | 249 |
MS.gene04636.t1 | AT4G30170 | 42.718 | 309 | 165 | 5 | 23 | 327 | 25 | 325 | 1.65e-80 | 248 |
MS.gene04636.t1 | AT4G25980 | 41.250 | 320 | 176 | 5 | 13 | 327 | 14 | 326 | 1.64e-79 | 245 |
MS.gene04636.t1 | AT5G15180 | 39.319 | 323 | 187 | 6 | 9 | 327 | 12 | 329 | 2.66e-79 | 245 |
MS.gene04636.t1 | AT5G51890 | 40.248 | 323 | 183 | 7 | 6 | 327 | 9 | 322 | 9.66e-79 | 243 |
MS.gene04636.t1 | AT4G37530 | 43.770 | 313 | 170 | 4 | 18 | 327 | 20 | 329 | 9.74e-79 | 243 |
MS.gene04636.t1 | AT1G77100 | 42.769 | 325 | 171 | 6 | 8 | 327 | 5 | 319 | 6.46e-78 | 241 |
MS.gene04636.t1 | AT5G42180 | 41.139 | 316 | 176 | 7 | 12 | 326 | 10 | 316 | 4.51e-77 | 239 |
MS.gene04636.t1 | AT5G14130 | 39.692 | 325 | 190 | 4 | 4 | 327 | 11 | 330 | 8.95e-77 | 238 |
MS.gene04636.t1 | AT5G14130 | 39.692 | 325 | 190 | 4 | 4 | 327 | 52 | 371 | 2.64e-76 | 239 |
MS.gene04636.t1 | AT3G49960 | 42.812 | 320 | 175 | 6 | 12 | 327 | 14 | 329 | 3.43e-76 | 237 |
MS.gene04636.t1 | AT2G39040 | 42.308 | 312 | 170 | 6 | 22 | 327 | 43 | 350 | 6.21e-76 | 237 |
MS.gene04636.t1 | AT4G37520 | 41.776 | 304 | 171 | 4 | 23 | 323 | 25 | 325 | 2.86e-75 | 234 |
MS.gene04636.t1 | AT1G05240 | 40.468 | 299 | 167 | 5 | 29 | 323 | 30 | 321 | 4.40e-75 | 234 |
MS.gene04636.t1 | AT1G05250 | 40.468 | 299 | 167 | 5 | 29 | 323 | 30 | 321 | 4.40e-75 | 234 |
MS.gene04636.t1 | AT5G64110 | 41.641 | 329 | 175 | 7 | 7 | 327 | 11 | 330 | 1.24e-74 | 233 |
MS.gene04636.t1 | AT1G71695 | 42.951 | 305 | 163 | 6 | 25 | 327 | 44 | 339 | 3.66e-74 | 233 |
MS.gene04636.t1 | AT4G33420 | 40.994 | 322 | 170 | 8 | 12 | 327 | 18 | 325 | 3.74e-74 | 231 |
MS.gene04636.t1 | AT2G43480 | 39.185 | 319 | 178 | 8 | 16 | 327 | 26 | 335 | 1.71e-73 | 230 |
MS.gene04636.t1 | AT5G64100 | 42.333 | 300 | 163 | 6 | 29 | 327 | 41 | 331 | 1.75e-73 | 230 |
MS.gene04636.t1 | AT4G33420 | 40.994 | 322 | 170 | 8 | 12 | 327 | 65 | 372 | 2.00e-73 | 231 |
MS.gene04636.t1 | AT4G37520 | 41.118 | 304 | 170 | 5 | 23 | 323 | 25 | 322 | 1.85e-72 | 227 |
MS.gene04636.t1 | AT2G34060 | 38.762 | 307 | 182 | 5 | 22 | 324 | 39 | 343 | 7.87e-72 | 226 |
MS.gene04636.t1 | AT5G67400 | 40.673 | 327 | 184 | 8 | 2 | 323 | 4 | 325 | 8.22e-72 | 226 |
MS.gene04636.t1 | AT2G35380 | 50.000 | 246 | 119 | 3 | 86 | 327 | 2 | 247 | 8.64e-72 | 223 |
MS.gene04636.t1 | AT4G33870 | 35.988 | 339 | 178 | 5 | 22 | 325 | 65 | 399 | 2.60e-71 | 227 |
MS.gene04636.t1 | AT5G24070 | 39.937 | 318 | 174 | 9 | 18 | 328 | 29 | 336 | 3.23e-71 | 224 |
MS.gene04636.t1 | AT4G37530 | 45.977 | 261 | 137 | 3 | 18 | 275 | 20 | 279 | 4.26e-70 | 220 |
MS.gene04636.t1 | AT4G26010 | 40.312 | 320 | 167 | 9 | 13 | 327 | 9 | 309 | 1.20e-69 | 219 |
MS.gene04636.t1 | AT4G26010 | 40.312 | 320 | 167 | 9 | 13 | 327 | 37 | 337 | 1.51e-69 | 220 |
MS.gene04636.t1 | AT1G34510 | 38.801 | 317 | 176 | 7 | 13 | 327 | 9 | 309 | 6.56e-69 | 218 |
MS.gene04636.t1 | AT5G22410 | 40.810 | 321 | 172 | 11 | 12 | 324 | 12 | 322 | 1.67e-67 | 215 |
MS.gene04636.t1 | AT2G24800 | 39.159 | 309 | 176 | 5 | 23 | 327 | 29 | 329 | 4.33e-67 | 214 |
MS.gene04636.t1 | AT4G17690 | 38.158 | 304 | 180 | 3 | 25 | 327 | 26 | 322 | 7.75e-67 | 213 |
MS.gene04636.t1 | AT4G31760 | 38.889 | 324 | 183 | 6 | 11 | 327 | 11 | 326 | 1.31e-66 | 212 |
MS.gene04636.t1 | AT1G30870 | 38.961 | 308 | 170 | 9 | 25 | 327 | 51 | 345 | 2.70e-66 | 212 |
MS.gene04636.t1 | AT5G47000 | 34.756 | 328 | 205 | 5 | 2 | 327 | 10 | 330 | 4.45e-65 | 209 |
MS.gene04636.t1 | AT1G24110 | 36.364 | 319 | 195 | 6 | 13 | 327 | 8 | 322 | 5.64e-64 | 206 |
MS.gene04636.t1 | AT4G21960 | 36.964 | 303 | 177 | 6 | 25 | 323 | 31 | 323 | 1.86e-61 | 199 |
MS.gene04636.t1 | AT3G28200 | 33.871 | 310 | 192 | 4 | 21 | 327 | 17 | 316 | 2.63e-60 | 196 |
MS.gene04636.t1 | AT5G40150 | 34.740 | 308 | 193 | 3 | 21 | 327 | 28 | 328 | 4.40e-58 | 190 |
MS.gene04636.t1 | AT2G37130 | 33.442 | 308 | 192 | 5 | 24 | 327 | 29 | 327 | 2.96e-54 | 181 |
MS.gene04636.t1 | AT2G37130 | 33.663 | 303 | 188 | 5 | 29 | 327 | 3 | 296 | 4.52e-54 | 179 |
MS.gene04636.t1 | AT3G17070 | 34.169 | 319 | 177 | 8 | 25 | 327 | 38 | 339 | 3.37e-50 | 170 |
MS.gene04636.t1 | AT4G25980 | 45.902 | 183 | 94 | 3 | 13 | 195 | 59 | 236 | 6.18e-48 | 163 |
MS.gene04636.t1 | AT5G39580 | 46.939 | 196 | 95 | 6 | 10 | 202 | 7 | 196 | 1.41e-45 | 155 |
MS.gene04636.t1 | AT2G24800 | 40.462 | 173 | 98 | 1 | 23 | 195 | 29 | 196 | 2.38e-36 | 131 |
MS.gene04636.t1 | AT3G17070 | 31.142 | 289 | 169 | 8 | 53 | 327 | 4 | 276 | 2.27e-35 | 130 |
MS.gene04636.t1 | AT4G35970 | 27.734 | 256 | 132 | 10 | 59 | 309 | 33 | 240 | 3.19e-15 | 75.1 |
MS.gene04636.t1 | AT3G42570 | 35.398 | 113 | 71 | 2 | 82 | 193 | 38 | 149 | 1.04e-14 | 70.9 |
MS.gene04636.t1 | AT1G77490 | 26.515 | 264 | 151 | 11 | 59 | 309 | 106 | 339 | 5.37e-14 | 72.8 |
MS.gene04636.t1 | AT1G77490 | 26.515 | 264 | 151 | 11 | 59 | 309 | 106 | 339 | 6.56e-14 | 72.4 |
MS.gene04636.t1 | AT4G35970 | 29.798 | 198 | 91 | 7 | 82 | 275 | 55 | 208 | 4.95e-13 | 67.8 |
MS.gene04636.t1 | AT4G08390 | 24.046 | 262 | 160 | 8 | 59 | 309 | 126 | 359 | 2.08e-12 | 67.8 |
MS.gene04636.t1 | AT4G08390 | 24.046 | 262 | 160 | 8 | 59 | 309 | 127 | 360 | 2.33e-12 | 67.8 |
MS.gene04636.t1 | AT4G08390 | 24.046 | 262 | 160 | 8 | 59 | 309 | 127 | 360 | 2.33e-12 | 67.8 |
MS.gene04636.t1 | AT4G08390 | 24.046 | 262 | 160 | 8 | 59 | 309 | 127 | 360 | 2.33e-12 | 67.8 |
Find 61 sgRNAs with CRISPR-Local
Find 91 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCTCCTTGACTTCCTATTAA+TGG | 0.177966 | 7.3:+17310323 | None:intergenic |
AGTGATCTTGTTGCATTATC+TGG | 0.246387 | 7.3:-17311061 | MS.gene04636:intron |
TGCTGAAGCTTCTGTATCTT+TGG | 0.257038 | 7.3:-17311477 | MS.gene04636:intron |
TAAGCCAACAGCAGCAAATT+TGG | 0.265842 | 7.3:+17311090 | None:intergenic |
TCCAATTGTAGGAAAGTTAA+TGG | 0.269235 | 7.3:-17310293 | MS.gene04636:CDS |
TCCATTAACTTTCCTACAAT+TGG | 0.278391 | 7.3:+17310292 | None:intergenic |
CGTGTCTTGTGCTGATATTT+TGG | 0.281472 | 7.3:-17311507 | MS.gene04636:CDS |
GATTATTAGCACTGTGAAAA+TGG | 0.288329 | 7.3:+17311920 | None:intergenic |
TAGTTGTTGTCGAAATTATT+TGG | 0.298058 | 7.3:+17310509 | None:intergenic |
GGTAATATCAGTCCATTAAT+AGG | 0.315159 | 7.3:-17310335 | MS.gene04636:CDS |
GCTAAGCTTTCAGTTGGATT+AGG | 0.331908 | 7.3:+17311124 | None:intergenic |
CATTAGTGGAAAACAATTCT+TGG | 0.347221 | 7.3:+17310444 | None:intergenic |
CTGAACAACATTTCTCACTA+TGG | 0.348902 | 7.3:+17311827 | None:intergenic |
CCACGAGCTGAATTATTGTT+AGG | 0.354824 | 7.3:+17311584 | None:intergenic |
TGCAGTCAGGAGGTCCTTCA+TGG | 0.392241 | 7.3:-17311210 | MS.gene04636:intron |
CACTGAAGTTGAATAGTCTT+TGG | 0.398801 | 7.3:+17310642 | None:intergenic |
TCGAAATTATTTGGTGATGA+AGG | 0.400046 | 7.3:+17310518 | None:intergenic |
GAATTAGGTGCACATACTTT+CGG | 0.400492 | 7.3:-17310689 | MS.gene04636:intron |
ACCGCCAAATTTGCTGCTGT+TGG | 0.433009 | 7.3:-17311094 | MS.gene04636:CDS |
CTCACTATGGAAGAAACATT+GGG | 0.436946 | 7.3:+17311840 | None:intergenic |
GTTGAATTCAGTGTTGGATC+AGG | 0.449005 | 7.3:+17310608 | None:intergenic |
GATTGTAGCAGCACCATTAG+TGG | 0.460308 | 7.3:+17310430 | None:intergenic |
GAGAAATTAGATCCAATTGT+AGG | 0.464574 | 7.3:-17310304 | MS.gene04636:CDS |
AGCAAATTTGGCGGTGACAT+TGG | 0.471266 | 7.3:+17311102 | None:intergenic |
CGAAATTATTTGGTGATGAA+GGG | 0.477837 | 7.3:+17310519 | None:intergenic |
GATATTACCCATGTTAATCA+TGG | 0.480311 | 7.3:+17310349 | None:intergenic |
GGTCTGATTGCAAACCAATC+TGG | 0.483029 | 7.3:-17311163 | MS.gene04636:CDS |
GCTTTCAGTTGGATTAGGAA+TGG | 0.497949 | 7.3:+17311129 | None:intergenic |
TCTCACTATGGAAGAAACAT+TGG | 0.503003 | 7.3:+17311839 | None:intergenic |
ACATTGGCTAAGCTTTCAGT+TGG | 0.503769 | 7.3:+17311118 | None:intergenic |
AAATCAAGGTCTTCTTCAAA+CGG | 0.509165 | 7.3:-17310468 | MS.gene04636:CDS |
CCTTCATGGAATGTACTACT+TGG | 0.512650 | 7.3:-17311196 | MS.gene04636:CDS |
GAGCATGTGATGGATTAAGA+AGG | 0.529837 | 7.3:+17311895 | None:intergenic |
TGTTCAGTCCATGATTAACA+TGG | 0.539490 | 7.3:-17310357 | MS.gene04636:CDS |
AGATATGTTGAATTCAGTGT+TGG | 0.541731 | 7.3:+17310602 | None:intergenic |
CTATTCAACTTCAGTGGCAC+GGG | 0.548890 | 7.3:-17310635 | MS.gene04636:CDS |
CATGAAACTGAAGACGGGTT+AGG | 0.549547 | 7.3:+17311769 | None:intergenic |
GCCAACAGCAGCAAATTTGG+CGG | 0.551525 | 7.3:+17311093 | None:intergenic |
AAATGTCCACAAAATGGAAG+TGG | 0.559942 | 7.3:-17310563 | MS.gene04636:CDS |
CATGTGATGGATTAAGAAGG+AGG | 0.571412 | 7.3:+17311898 | None:intergenic |
GAGGTTAGTTGAGCATGTGA+TGG | 0.579020 | 7.3:+17311885 | None:intergenic |
GTTCAGTCCATGATTAACAT+GGG | 0.587414 | 7.3:-17310356 | MS.gene04636:CDS |
GGAATGTACTACTTGGCAGA+AGG | 0.592126 | 7.3:-17311189 | MS.gene04636:CDS |
GTACTACTTGGCAGAAGGGA+CGG | 0.592958 | 7.3:-17311184 | MS.gene04636:CDS |
GAATGTACTACTTGGCAGAA+GGG | 0.593239 | 7.3:-17311188 | MS.gene04636:CDS |
GCTTGCAAAGTTGTTAACAA+TGG | 0.593422 | 7.3:+17310406 | None:intergenic |
GCAATCATGAAACTGAAGAC+GGG | 0.594589 | 7.3:+17311764 | None:intergenic |
AGCAATCATGAAACTGAAGA+CGG | 0.599227 | 7.3:+17311763 | None:intergenic |
TGGATGTGTTGGCACCAGAT+TGG | 0.602779 | 7.3:+17311149 | None:intergenic |
CCAAGTAGTACATTCCATGA+AGG | 0.604615 | 7.3:+17311196 | None:intergenic |
TCAGCACAAGACACGACAGC+AGG | 0.604846 | 7.3:+17311515 | None:intergenic |
ACTATTCAACTTCAGTGGCA+CGG | 0.605244 | 7.3:-17310636 | MS.gene04636:CDS |
GTTAATCATGGACTGAACAA+AGG | 0.607469 | 7.3:+17310361 | None:intergenic |
AGTCCATTAATAGGAAGTCA+AGG | 0.610410 | 7.3:-17310326 | MS.gene04636:CDS |
TGGATTAGGAATGGATGTGT+TGG | 0.616961 | 7.3:+17311138 | None:intergenic |
CAAAGACTATTCAACTTCAG+TGG | 0.618577 | 7.3:-17310641 | MS.gene04636:CDS |
CTGAAGACGGGTTAGGCTCG+CGG | 0.619803 | 7.3:+17311776 | None:intergenic |
CCTAACAATAATTCAGCTCG+TGG | 0.620664 | 7.3:-17311584 | MS.gene04636:CDS |
AATGTATATTTGCAGTCAGG+AGG | 0.632669 | 7.3:-17311220 | MS.gene04636:intron |
GTTAGGCTCGCGGTAATACG+AGG | 0.667312 | 7.3:+17311786 | None:intergenic |
TCACTATGGAAGAAACATTG+GGG | 0.713143 | 7.3:+17311841 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TAATTAACTAAATATGAATT+AGG | + | chr7.3:17310779-17310798 | None:intergenic | 10.0% |
!! | AAATTCAAAATTAATGTTTG+CGG | + | chr7.3:17311329-17311348 | None:intergenic | 15.0% |
!!! | TTATTAATTTGTGTATTTCA+GGG | - | chr7.3:17310557-17310576 | MS.gene04636:CDS | 15.0% |
!! | AAAAATCTTCTCAAAAATCA+AGG | - | chr7.3:17311746-17311765 | MS.gene04636:intron | 20.0% |
!! | TAATTAAATTGCATAACCAA+TGG | + | chr7.3:17310927-17310946 | None:intergenic | 20.0% |
!! | TAGCAAACTAATATTTATCA+AGG | - | chr7.3:17310862-17310881 | MS.gene04636:intron | 20.0% |
!!! | GTTATTAATTTGTGTATTTC+AGG | - | chr7.3:17310556-17310575 | MS.gene04636:CDS | 20.0% |
!!! | TTATTGATTTCATTATGTGT+AGG | - | chr7.3:17311468-17311487 | MS.gene04636:intron | 20.0% |
! | AATCCTTAATTGATACTGTA+CGG | + | chr7.3:17310898-17310917 | None:intergenic | 25.0% |
! | GTGAAAATGGAATAAAAAGT+AGG | + | chr7.3:17310298-17310317 | None:intergenic | 25.0% |
! | TAATTTGAGTATGTTGGATT+AGG | - | chr7.3:17311216-17311235 | MS.gene04636:intron | 25.0% |
! | TAGTTGTTGTCGAAATTATT+TGG | + | chr7.3:17311722-17311741 | None:intergenic | 25.0% |
!! | TAACTATTTGTTGACACAAA+TGG | - | chr7.3:17311508-17311527 | MS.gene04636:CDS | 25.0% |
!!! | AGACTTTAATTTGAGTATGT+TGG | - | chr7.3:17311210-17311229 | MS.gene04636:intron | 25.0% |
AAATCAAGGTCTTCTTCAAA+CGG | - | chr7.3:17311760-17311779 | MS.gene04636:CDS | 30.0% | |
AGATATGTTGAATTCAGTGT+TGG | + | chr7.3:17311629-17311648 | None:intergenic | 30.0% | |
ATTAAGGATTATGACACCAT+TGG | - | chr7.3:17310908-17310927 | MS.gene04636:intron | 30.0% | |
ATTTCGACAATTGTATCTGA+TGG | - | chr7.3:17311383-17311402 | MS.gene04636:intron | 30.0% | |
CAAAATTAATGTTTGCGGAA+TGG | + | chr7.3:17311324-17311343 | None:intergenic | 30.0% | |
CAAATGGATCAACTTGAATT+AGG | - | chr7.3:17311524-17311543 | MS.gene04636:CDS | 30.0% | |
CAACAAAAATGTCCACAAAA+TGG | - | chr7.3:17311659-17311678 | MS.gene04636:intron | 30.0% | |
CATTAGTGGAAAACAATTCT+TGG | + | chr7.3:17311787-17311806 | None:intergenic | 30.0% | |
GAGAAATTAGATCCAATTGT+AGG | - | chr7.3:17311924-17311943 | MS.gene04636:CDS | 30.0% | |
GATAATGTATATTTGCAGTC+AGG | - | chr7.3:17311005-17311024 | MS.gene04636:intron | 30.0% | |
GATATTACCCATGTTAATCA+TGG | + | chr7.3:17311882-17311901 | None:intergenic | 30.0% | |
GATTATTAGCACTGTGAAAA+TGG | + | chr7.3:17310311-17310330 | None:intergenic | 30.0% | |
GGTAATATCAGTCCATTAAT+AGG | - | chr7.3:17311893-17311912 | MS.gene04636:CDS | 30.0% | |
TCCAATTGTAGGAAAGTTAA+TGG | - | chr7.3:17311935-17311954 | MS.gene04636:CDS | 30.0% | |
TCCATTAACTTTCCTACAAT+TGG | + | chr7.3:17311939-17311958 | None:intergenic | 30.0% | |
TGATTAATGAGCTAGAGTTT+AGG | - | chr7.3:17310514-17310533 | MS.gene04636:CDS | 30.0% | |
! | CAAGAATTGTTTTCCACTAA+TGG | - | chr7.3:17311785-17311804 | MS.gene04636:CDS | 30.0% |
! | GCATCTCTTTTATTAGATCA+AGG | - | chr7.3:17310587-17310606 | MS.gene04636:CDS | 30.0% |
! | TCTCTTTTATTAGATCAAGG+TGG | - | chr7.3:17310590-17310609 | MS.gene04636:CDS | 30.0% |
!! | CGAAATTATTTGGTGATGAA+GGG | + | chr7.3:17311712-17311731 | None:intergenic | 30.0% |
!! | TCGAAATTATTTGGTGATGA+AGG | + | chr7.3:17311713-17311732 | None:intergenic | 30.0% |
AAATGTCCACAAAATGGAAG+TGG | - | chr7.3:17311665-17311684 | MS.gene04636:intron | 35.0% | |
AATGTATATTTGCAGTCAGG+AGG | - | chr7.3:17311008-17311027 | MS.gene04636:intron | 35.0% | |
AGCAATCATGAAACTGAAGA+CGG | + | chr7.3:17310468-17310487 | None:intergenic | 35.0% | |
AGGCTTCAAAAAAAGCTGTT+TGG | + | chr7.3:17311850-17311869 | None:intergenic | 35.0% | |
AGTCCATTAATAGGAAGTCA+AGG | - | chr7.3:17311902-17311921 | MS.gene04636:CDS | 35.0% | |
AGTGATCTTGTTGCATTATC+TGG | - | chr7.3:17311167-17311186 | MS.gene04636:CDS | 35.0% | |
CAAAGACTATTCAACTTCAG+TGG | - | chr7.3:17311587-17311606 | MS.gene04636:CDS | 35.0% | |
CACTGAAGTTGAATAGTCTT+TGG | + | chr7.3:17311589-17311608 | None:intergenic | 35.0% | |
CATAAACTCATGCGTTAACT+AGG | - | chr7.3:17311288-17311307 | MS.gene04636:intron | 35.0% | |
CTCACTATGGAAGAAACATT+GGG | + | chr7.3:17310391-17310410 | None:intergenic | 35.0% | |
CTGAACAACATTTCTCACTA+TGG | + | chr7.3:17310404-17310423 | None:intergenic | 35.0% | |
GAATTAGGTGCACATACTTT+CGG | - | chr7.3:17311539-17311558 | MS.gene04636:CDS | 35.0% | |
GCTTGCAAAGTTGTTAACAA+TGG | + | chr7.3:17311825-17311844 | None:intergenic | 35.0% | |
GTTCAGTCCATGATTAACAT+GGG | - | chr7.3:17311872-17311891 | MS.gene04636:CDS | 35.0% | |
TCACTATGGAAGAAACATTG+GGG | + | chr7.3:17310390-17310409 | None:intergenic | 35.0% | |
TCTCACTATGGAAGAAACAT+TGG | + | chr7.3:17310392-17310411 | None:intergenic | 35.0% | |
TCTCCTTGACTTCCTATTAA+TGG | + | chr7.3:17311908-17311927 | None:intergenic | 35.0% | |
TGTCCGTACAGTATCAATTA+AGG | - | chr7.3:17310892-17310911 | MS.gene04636:intron | 35.0% | |
TGTTCAGTCCATGATTAACA+TGG | - | chr7.3:17311871-17311890 | MS.gene04636:CDS | 35.0% | |
! | AGGACATGAATTTTCAACAG+AGG | + | chr7.3:17310696-17310715 | None:intergenic | 35.0% |
! | GTTAATCATGGACTGAACAA+AGG | + | chr7.3:17311870-17311889 | None:intergenic | 35.0% |
!!! | TGTTTTCGAGTAGAATGTTG+AGG | + | chr7.3:17310365-17310384 | None:intergenic | 35.0% |
ACTATTCAACTTCAGTGGCA+CGG | - | chr7.3:17311592-17311611 | MS.gene04636:CDS | 40.0% | |
CCAAGTAGTACATTCCATGA+AGG | + | chr7.3:17311035-17311054 | None:intergenic | 40.0% | |
CCACGAGCTGAATTATTGTT+AGG | + | chr7.3:17310647-17310666 | None:intergenic | 40.0% | |
CCTAACAATAATTCAGCTCG+TGG | - | chr7.3:17310644-17310663 | MS.gene04636:CDS | 40.0% | |
CCTTCATGGAATGTACTACT+TGG | - | chr7.3:17311032-17311051 | MS.gene04636:intron | 40.0% | |
GAATGTACTACTTGGCAGAA+GGG | - | chr7.3:17311040-17311059 | MS.gene04636:intron | 40.0% | |
GCAATCATGAAACTGAAGAC+GGG | + | chr7.3:17310467-17310486 | None:intergenic | 40.0% | |
GCTAAGCTTTCAGTTGGATT+AGG | + | chr7.3:17311107-17311126 | None:intergenic | 40.0% | |
TAAGCCAACAGCAGCAAATT+TGG | + | chr7.3:17311141-17311160 | None:intergenic | 40.0% | |
TGCTGAAGCTTCTGTATCTT+TGG | - | chr7.3:17310751-17310770 | MS.gene04636:intron | 40.0% | |
TTAGCTAGATGTGTCAAAGC+AGG | + | chr7.3:17310953-17310972 | None:intergenic | 40.0% | |
! | ACATTGGCTAAGCTTTCAGT+TGG | + | chr7.3:17311113-17311132 | None:intergenic | 40.0% |
! | GCTTTCAGTTGGATTAGGAA+TGG | + | chr7.3:17311102-17311121 | None:intergenic | 40.0% |
! | GTGTTACCACTTCCATTTTG+TGG | + | chr7.3:17311674-17311693 | None:intergenic | 40.0% |
! | GTTGAATTCAGTGTTGGATC+AGG | + | chr7.3:17311623-17311642 | None:intergenic | 40.0% |
! | TGGATTAGGAATGGATGTGT+TGG | + | chr7.3:17311093-17311112 | None:intergenic | 40.0% |
!! | CATGTGATGGATTAAGAAGG+AGG | + | chr7.3:17310333-17310352 | None:intergenic | 40.0% |
!! | CGTGTCTTGTGCTGATATTT+TGG | - | chr7.3:17310721-17310740 | MS.gene04636:intron | 40.0% |
!! | GAGCATGTGATGGATTAAGA+AGG | + | chr7.3:17310336-17310355 | None:intergenic | 40.0% |
AGCAAATTTGGCGGTGACAT+TGG | + | chr7.3:17311129-17311148 | None:intergenic | 45.0% | |
CTATTCAACTTCAGTGGCAC+GGG | - | chr7.3:17311593-17311612 | MS.gene04636:CDS | 45.0% | |
GATTGTAGCAGCACCATTAG+TGG | + | chr7.3:17311801-17311820 | None:intergenic | 45.0% | |
GGAATGTACTACTTGGCAGA+AGG | - | chr7.3:17311039-17311058 | MS.gene04636:intron | 45.0% | |
GGTCTGATTGCAAACCAATC+TGG | - | chr7.3:17311065-17311084 | MS.gene04636:CDS | 45.0% | |
! | CATGAAACTGAAGACGGGTT+AGG | + | chr7.3:17310462-17310481 | None:intergenic | 45.0% |
! | GAGGTTAGTTGAGCATGTGA+TGG | + | chr7.3:17310346-17310365 | None:intergenic | 45.0% |
GCCAACAGCAGCAAATTTGG+CGG | + | chr7.3:17311138-17311157 | None:intergenic | 50.0% | |
GTACTACTTGGCAGAAGGGA+CGG | - | chr7.3:17311044-17311063 | MS.gene04636:intron | 50.0% | |
! | TGGATGTGTTGGCACCAGAT+TGG | + | chr7.3:17311082-17311101 | None:intergenic | 50.0% |
!! | ACCGCCAAATTTGCTGCTGT+TGG | - | chr7.3:17311134-17311153 | MS.gene04636:CDS | 50.0% |
GTTAGGCTCGCGGTAATACG+AGG | + | chr7.3:17310445-17310464 | None:intergenic | 55.0% | |
TCAGCACAAGACACGACAGC+AGG | + | chr7.3:17310716-17310735 | None:intergenic | 55.0% | |
TGCAGTCAGGAGGTCCTTCA+TGG | - | chr7.3:17311018-17311037 | MS.gene04636:intron | 55.0% | |
!! | CTGAAGACGGGTTAGGCTCG+CGG | + | chr7.3:17310455-17310474 | None:intergenic | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.3 | gene | 17310286 | 17311964 | 17310286 | ID=MS.gene04636 |
chr7.3 | mRNA | 17310286 | 17311964 | 17310286 | ID=MS.gene04636.t1;Parent=MS.gene04636 |
chr7.3 | exon | 17311755 | 17311964 | 17311755 | ID=MS.gene04636.t1.exon1;Parent=MS.gene04636.t1 |
chr7.3 | CDS | 17311755 | 17311964 | 17311755 | ID=cds.MS.gene04636.t1;Parent=MS.gene04636.t1 |
chr7.3 | exon | 17311478 | 17311672 | 17311478 | ID=MS.gene04636.t1.exon2;Parent=MS.gene04636.t1 |
chr7.3 | CDS | 17311478 | 17311672 | 17311478 | ID=cds.MS.gene04636.t1;Parent=MS.gene04636.t1 |
chr7.3 | exon | 17311062 | 17311227 | 17311062 | ID=MS.gene04636.t1.exon3;Parent=MS.gene04636.t1 |
chr7.3 | CDS | 17311062 | 17311227 | 17311062 | ID=cds.MS.gene04636.t1;Parent=MS.gene04636.t1 |
chr7.3 | exon | 17310286 | 17310704 | 17310286 | ID=MS.gene04636.t1.exon4;Parent=MS.gene04636.t1 |
chr7.3 | CDS | 17310286 | 17310704 | 17310286 | ID=cds.MS.gene04636.t1;Parent=MS.gene04636.t1 |
Gene Sequence |
Protein sequence |