AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene40613

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene40613.t1 MTR_1g054205 97.256 328 9 0 1 328 1 328 0.0 644
MS.gene40613.t1 MTR_7g093370 80.062 321 62 1 10 328 53 373 0.0 521
MS.gene40613.t1 MTR_2g029815 60.256 312 123 1 15 326 20 330 8.08e-134 384
MS.gene40613.t1 MTR_2g029820 59.935 307 122 1 20 326 25 330 1.43e-132 381
MS.gene40613.t1 MTR_2g029830 59.935 307 122 1 20 326 24 329 7.24e-129 372
MS.gene40613.t1 MTR_2g028980 58.044 317 131 2 10 326 16 330 3.23e-127 368
MS.gene40613.t1 MTR_2g029860 58.716 327 133 2 2 327 6 331 4.37e-127 367
MS.gene40613.t1 MTR_2g029800 57.329 307 130 1 20 326 25 330 1.01e-126 367
MS.gene40613.t1 MTR_4g125940 58.497 306 122 2 23 326 27 329 8.85e-126 363
MS.gene40613.t1 MTR_2g040000 56.740 319 132 2 11 326 16 331 1.06e-124 360
MS.gene40613.t1 MTR_2g029850 60.065 308 122 1 20 327 25 331 8.32e-124 359
MS.gene40613.t1 MTR_2g029750 56.678 307 132 1 20 326 25 330 1.47e-121 353
MS.gene40613.t1 MTR_2g029560 52.905 327 153 1 1 327 1 326 4.62e-121 352
MS.gene40613.t1 MTR_2g029740 56.026 307 134 1 20 326 25 330 1.84e-120 351
MS.gene40613.t1 MTR_2g029910 57.468 308 129 2 20 326 26 332 1.47e-116 341
MS.gene40613.t1 MTR_2g029730 53.416 322 149 1 6 327 7 327 5.65e-116 339
MS.gene40613.t1 MTR_4g125940 60.145 276 105 2 53 326 2 274 1.24e-114 333
MS.gene40613.t1 MTR_3g094650 53.231 325 134 6 9 326 9 322 9.93e-111 325
MS.gene40613.t1 MTR_5g017860 51.250 320 150 5 9 326 11 326 4.11e-107 316
MS.gene40613.t1 MTR_5g017850 51.562 320 149 5 9 326 11 326 5.89e-107 315
MS.gene40613.t1 MTR_2g084080 51.111 315 143 4 12 326 14 317 7.19e-106 312
MS.gene40613.t1 MTR_2g029830 59.922 257 102 1 70 326 6 261 2.19e-105 310
MS.gene40613.t1 MTR_5g021060 49.835 303 150 2 24 326 30 330 3.89e-104 308
MS.gene40613.t1 MTR_3g094670 52.308 325 140 6 5 326 10 322 4.38e-104 308
MS.gene40613.t1 MTR_8g076820 49.211 317 157 3 12 326 16 330 2.88e-103 306
MS.gene40613.t1 MTR_2g084110 49.841 315 147 4 12 326 14 317 7.03e-103 305
MS.gene40613.t1 MTR_2g084020 49.367 316 150 4 11 326 13 318 1.89e-102 303
MS.gene40613.t1 MTR_3g072190 49.837 307 144 3 20 326 22 318 2.09e-102 303
MS.gene40613.t1 MTR_5g074970 49.068 322 150 5 9 326 15 326 3.78e-101 300
MS.gene40613.t1 MTR_2g084010 48.287 321 153 4 10 326 7 318 5.08e-101 300
MS.gene40613.t1 MTR_4g029200 48.701 308 148 3 19 326 41 338 6.80e-101 300
MS.gene40613.t1 MTR_3g094630 50.938 320 143 5 10 326 14 322 1.63e-100 299
MS.gene40613.t1 MTR_2g084000 48.580 317 152 4 11 326 13 319 7.47e-100 297
MS.gene40613.t1 MTR_3g466200 47.853 326 155 7 4 326 7 320 4.55e-99 295
MS.gene40613.t1 MTR_5g083860 47.432 331 157 6 2 326 6 325 9.85e-99 294
MS.gene40613.t1 MTR_4g029170 47.368 323 154 6 10 326 9 321 2.18e-98 293
MS.gene40613.t1 MTR_5g074860 45.921 331 163 6 3 326 4 325 4.77e-98 293
MS.gene40613.t1 MTR_2g084090 47.516 322 154 5 10 326 7 318 2.14e-97 291
MS.gene40613.t1 MTR_3g466180 48.598 321 151 4 10 326 13 323 6.49e-97 290
MS.gene40613.t1 MTR_7g072510 46.032 315 157 4 15 326 8 312 1.71e-96 288
MS.gene40613.t1 MTR_1g022970 47.855 303 157 1 24 326 46 347 7.64e-96 288
MS.gene40613.t1 MTR_4g083710 46.084 332 165 5 1 326 1 324 1.71e-95 286
MS.gene40613.t1 MTR_4g029180 47.841 301 145 5 28 326 31 321 4.78e-94 282
MS.gene40613.t1 MTR_4g122640 48.185 303 153 3 24 326 38 336 5.40e-94 283
MS.gene40613.t1 MTR_3g467600 45.171 321 165 4 9 326 12 324 4.73e-93 280
MS.gene40613.t1 MTR_1g115900 45.846 325 157 8 11 327 9 322 1.07e-91 276
MS.gene40613.t1 MTR_5g074740 43.939 330 171 6 2 326 1 321 1.95e-91 276
MS.gene40613.t1 MTR_4g074995 47.170 318 143 6 13 326 12 308 3.98e-91 274
MS.gene40613.t1 MTR_5g074760 43.333 330 173 6 2 326 1 321 8.73e-91 274
MS.gene40613.t1 MTR_5g014100 46.906 307 158 3 24 326 26 331 1.14e-90 274
MS.gene40613.t1 MTR_4g029190 47.541 305 151 5 23 326 44 340 3.75e-90 273
MS.gene40613.t1 MTR_7g072480 44.892 323 166 4 4 326 6 316 4.43e-90 272
MS.gene40613.t1 MTR_5g074710 43.807 331 170 7 2 326 1 321 5.47e-90 272
MS.gene40613.t1 MTR_4g074990 44.377 329 156 4 1 326 1 305 1.57e-89 270
MS.gene40613.t1 MTR_2g088770 41.615 322 177 6 11 326 9 325 1.22e-87 266
MS.gene40613.t1 MTR_4g046713 40.867 323 180 5 11 326 8 326 7.44e-86 261
MS.gene40613.t1 MTR_4g114210 44.051 311 161 5 21 326 18 320 1.09e-84 258
MS.gene40613.t1 MTR_7g107520 43.396 318 169 6 13 326 10 320 1.13e-84 258
MS.gene40613.t1 MTR_4g030890 42.997 307 169 4 20 326 96 396 1.40e-84 261
MS.gene40613.t1 MTR_7g026990 44.444 315 163 5 14 327 20 323 5.08e-84 257
MS.gene40613.t1 MTR_4g031140 41.776 304 171 4 24 327 28 325 7.35e-84 257
MS.gene40613.t1 MTR_5g049280 42.357 314 175 6 17 326 26 337 1.96e-82 253
MS.gene40613.t1 MTR_1g101830 40.439 319 181 6 9 326 12 322 1.00e-81 251
MS.gene40613.t1 MTR_3g092990 41.615 322 181 5 8 326 9 326 1.47e-81 251
MS.gene40613.t1 MTR_2g008710 44.554 303 156 5 28 326 31 325 1.54e-81 250
MS.gene40613.t1 MTR_5g074860 42.900 331 134 8 3 326 4 286 3.33e-81 248
MS.gene40613.t1 MTR_3g072190 48.846 260 123 3 67 326 2 251 6.43e-81 246
MS.gene40613.t1 MTR_4g074980 42.638 326 151 7 1 326 5 294 1.18e-80 247
MS.gene40613.t1 MTR_5g022870 42.188 320 169 10 9 326 11 316 1.77e-80 248
MS.gene40613.t1 MTR_6g043280 44.918 305 153 7 24 326 41 332 4.02e-80 247
MS.gene40613.t1 MTR_7g086820 41.639 305 168 6 22 326 18 312 1.77e-78 242
MS.gene40613.t1 MTR_6g027440 43.614 321 169 8 6 326 6 314 2.71e-78 242
MS.gene40613.t1 MTR_0155s0040 40.850 306 167 7 21 326 24 315 5.89e-78 241
MS.gene40613.t1 MTR_1g009750 42.020 307 171 4 23 326 26 328 7.22e-77 239
MS.gene40613.t1 MTR_4g133800 42.809 299 159 6 29 326 46 333 8.08e-77 239
MS.gene40613.t1 MTR_8g075100 42.157 306 162 9 24 326 26 319 1.89e-76 237
MS.gene40613.t1 MTR_1g077000 40.367 327 175 8 6 326 15 327 1.70e-75 235
MS.gene40613.t1 MTR_4g074980 45.946 259 127 4 1 256 5 253 1.81e-74 230
MS.gene40613.t1 MTR_2g437770 40.328 305 169 5 24 327 50 342 3.44e-74 232
MS.gene40613.t1 MTR_2g099175 39.157 332 180 7 9 326 12 335 4.45e-74 232
MS.gene40613.t1 MTR_4g127670 42.208 308 167 3 23 326 23 323 7.82e-74 231
MS.gene40613.t1 MTR_1g025980 39.144 327 188 8 2 326 1 318 8.82e-74 230
MS.gene40613.t1 MTR_7g029030 39.628 323 182 5 9 326 6 320 5.63e-73 228
MS.gene40613.t1 MTR_6g043240 41.613 310 166 6 19 327 37 332 6.68e-72 227
MS.gene40613.t1 MTR_2g067440 38.253 332 170 7 24 325 60 386 6.00e-71 225
MS.gene40613.t1 MTR_4g095450 42.284 324 169 8 8 322 6 320 6.99e-71 223
MS.gene40613.t1 MTR_2g008160 40.575 313 171 8 20 326 20 323 3.35e-70 221
MS.gene40613.t1 MTR_1g038680 41.722 302 171 4 28 326 33 332 1.37e-69 220
MS.gene40613.t1 MTR_3g092990 39.441 322 177 6 8 326 9 315 1.62e-69 219
MS.gene40613.t1 MTR_7g086870 39.869 306 169 7 22 326 20 311 3.55e-69 218
MS.gene40613.t1 MTR_5g016010 38.037 326 193 7 2 322 4 325 4.63e-69 219
MS.gene40613.t1 MTR_2g078610 37.237 333 175 6 24 325 76 405 7.44e-69 221
MS.gene40613.t1 MTR_4g087965 39.803 304 177 5 23 322 41 342 8.30e-69 218
MS.gene40613.t1 MTR_1g090760 37.538 325 190 5 10 326 11 330 1.46e-68 218
MS.gene40613.t1 MTR_2g077990 37.425 334 173 7 24 325 76 405 6.02e-68 218
MS.gene40613.t1 MTR_1g086320 38.138 333 193 7 1 326 7 333 2.03e-67 214
MS.gene40613.t1 MTR_1g009750 38.994 318 175 6 9 326 13 311 2.85e-67 213
MS.gene40613.t1 MTR_1g086490 37.574 338 195 7 1 326 7 340 1.60e-65 210
MS.gene40613.t1 MTR_2g008730 38.024 334 165 7 2 326 1 301 6.18e-65 207
MS.gene40613.t1 MTR_6g043460 38.511 309 170 7 19 322 31 324 4.00e-64 206
MS.gene40613.t1 MTR_2g078280 37.383 321 165 7 24 312 76 392 1.09e-62 204
MS.gene40613.t1 MTR_5g033470 36.538 312 190 5 20 326 69 377 2.77e-62 202
MS.gene40613.t1 MTR_3g105790 38.750 320 185 5 10 326 11 322 1.11e-61 199
MS.gene40613.t1 MTR_2g067450 37.829 304 182 5 24 325 11 309 2.95e-61 198
MS.gene40613.t1 MTR_2g029880 51.777 197 85 2 130 326 2 188 1.70e-60 192
MS.gene40613.t1 MTR_8g062780 37.143 315 193 4 14 326 13 324 3.90e-60 196
MS.gene40613.t1 MTR_1g066710 34.740 308 189 4 23 327 26 324 6.03e-60 195
MS.gene40613.t1 MTR_4g132490 36.688 308 183 5 23 326 28 327 2.23e-57 188
MS.gene40613.t1 MTR_0147s0010 35.077 325 174 6 21 325 74 381 8.26e-57 189
MS.gene40613.t1 MTR_1g066380 35.065 308 188 6 23 327 26 324 3.24e-56 185
MS.gene40613.t1 MTR_1g066640 35.065 308 188 6 23 327 26 324 1.91e-55 183
MS.gene40613.t1 MTR_1g066680 35.390 308 186 7 23 327 26 323 2.51e-55 183
MS.gene40613.t1 MTR_4g132110 32.628 331 197 7 7 322 5 324 7.27e-55 182
MS.gene40613.t1 MTR_0286s0010 36.923 325 190 11 9 326 18 334 1.30e-54 181
MS.gene40613.t1 MTR_6g008075 36.923 325 190 11 9 326 18 334 1.30e-54 181
MS.gene40613.t1 MTR_4g132110 33.333 336 193 9 7 322 5 329 7.09e-54 180
MS.gene40613.t1 MTR_2g008160 35.463 313 152 8 20 326 20 288 3.51e-52 174
MS.gene40613.t1 MTR_3g072210 44.792 192 97 3 136 326 55 238 1.81e-49 165
MS.gene40613.t1 MTR_5g074700 38.362 232 118 5 98 326 5 214 6.34e-47 158
MS.gene40613.t1 MTR_1g066380 35.361 263 158 6 68 327 3 256 2.60e-44 152
MS.gene40613.t1 MTR_2g008160 45.930 172 86 4 20 190 20 185 7.75e-44 149
MS.gene40613.t1 MTR_3g105790 38.645 251 144 4 79 326 3 246 4.48e-43 149
MS.gene40613.t1 MTR_3g072260 55.970 134 51 3 6 132 1 133 3.23e-39 135
MS.gene40613.t1 MTR_7g072490 37.849 251 92 6 70 320 2 188 3.65e-36 130
MS.gene40613.t1 MTR_2g077980 31.522 276 149 9 87 325 11 283 1.55e-34 127
MS.gene40613.t1 MTR_2g078560 31.390 223 120 5 134 325 99 319 7.18e-31 119
MS.gene40613.t1 MTR_5g058120 37.654 162 88 3 161 322 7 155 2.84e-26 105
MS.gene40613.t1 MTR_7g086790 34.896 192 102 5 71 262 17 185 1.34e-24 99.0
MS.gene40613.t1 MTR_4g031040 32.558 172 72 3 87 258 4 131 1.42e-19 84.0
MS.gene40613.t1 MTR_4g114220 51.765 85 30 2 50 134 29 102 3.03e-19 83.2
MS.gene40613.t1 MTR_1g089005 35.075 134 78 4 9 136 1 131 1.25e-18 82.0
MS.gene40613.t1 MTR_6g048160 56.944 72 26 2 63 134 22 88 4.42e-18 78.6
MS.gene40613.t1 MTR_2g029930 46.316 95 25 3 20 103 15 94 1.27e-17 77.4
MS.gene40613.t1 MTR_5g074770 44.595 74 41 0 252 325 35 108 2.06e-17 77.0
MS.gene40613.t1 MTR_3g462850 34.507 142 88 5 189 326 9 149 5.61e-17 77.0
MS.gene40613.t1 MTR_1g098320 43.243 74 40 1 249 322 49 120 1.49e-14 70.1
MS.gene40613.t1 MTR_7g086810 30.579 121 57 1 22 142 4 97 7.85e-14 70.5
MS.gene40613.t1 MTR_7g107500 45.238 84 43 2 243 326 17 97 1.07e-13 66.6
MS.gene40613.t1 MTR_4g012865 42.105 76 43 1 21 96 74 148 1.66e-13 67.8
MS.gene40613.t1 MTR_7g086785 46.575 73 37 2 70 142 4 74 6.69e-12 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene40613.t1 AT5G06720 72.644 329 84 2 5 328 8 335 1.87e-170 477
MS.gene40613.t1 AT5G06730 68.485 330 98 2 3 327 7 335 9.23e-160 451
MS.gene40613.t1 AT2G38380 55.692 325 141 3 4 326 10 333 4.66e-124 360
MS.gene40613.t1 AT5G19880 53.823 327 149 2 2 326 3 329 2.42e-123 357
MS.gene40613.t1 AT3G32980 55.663 309 134 3 20 326 27 334 9.92e-122 354
MS.gene40613.t1 AT2G38390 54.545 308 138 2 20 326 27 333 7.13e-121 352
MS.gene40613.t1 AT5G19890 55.660 318 131 5 12 326 17 327 9.69e-120 348
MS.gene40613.t1 AT3G49110 52.322 323 149 4 8 326 15 336 6.11e-118 344
MS.gene40613.t1 AT3G49120 54.369 309 138 3 20 326 28 335 1.25e-117 343
MS.gene40613.t1 AT4G08770 52.427 309 144 3 20 326 20 327 2.08e-115 338
MS.gene40613.t1 AT4G08780 51.456 309 147 3 20 326 20 327 5.01e-114 334
MS.gene40613.t1 AT4G36430 51.097 319 152 3 10 326 14 330 6.63e-112 328
MS.gene40613.t1 AT2G18150 52.117 307 145 2 22 328 34 338 3.06e-111 327
MS.gene40613.t1 AT5G66390 50.774 323 153 3 8 326 13 333 8.07e-111 325
MS.gene40613.t1 AT2G18140 52.159 301 142 2 28 328 39 337 2.48e-110 324
MS.gene40613.t1 AT5G05340 53.571 308 129 5 22 326 28 324 1.65e-107 317
MS.gene40613.t1 AT3G50990 51.815 303 144 2 24 326 41 341 2.06e-107 317
MS.gene40613.t1 AT1G49570 50.662 302 143 4 24 322 48 346 7.19e-103 306
MS.gene40613.t1 AT1G44970 48.571 315 153 2 20 326 33 346 1.48e-98 295
MS.gene40613.t1 AT1G14550 45.342 322 162 6 9 326 10 321 1.68e-92 278
MS.gene40613.t1 AT5G58390 46.894 322 158 6 8 326 5 316 4.53e-92 277
MS.gene40613.t1 AT5G58400 46.584 322 157 6 9 326 15 325 4.17e-91 275
MS.gene40613.t1 AT1G14540 44.860 321 169 3 6 326 3 315 6.28e-91 274
MS.gene40613.t1 AT2G22420 42.138 318 178 4 9 326 8 319 4.79e-90 272
MS.gene40613.t1 AT2G35380 47.855 303 153 4 28 326 34 335 1.77e-89 271
MS.gene40613.t1 AT4G16270 46.382 304 157 5 24 326 50 348 1.16e-87 267
MS.gene40613.t1 AT5G64120 47.492 299 148 6 28 326 39 328 1.04e-86 264
MS.gene40613.t1 AT5G39580 46.789 327 163 8 1 326 3 319 2.43e-86 263
MS.gene40613.t1 AT1G05260 41.304 322 180 6 8 326 10 325 4.20e-86 262
MS.gene40613.t1 AT1G68850 42.857 308 169 7 24 326 30 335 1.44e-85 261
MS.gene40613.t1 AT3G01190 41.640 317 177 6 11 326 12 321 1.89e-85 260
MS.gene40613.t1 AT3G03670 42.633 319 179 3 8 326 7 321 3.31e-84 257
MS.gene40613.t1 AT4G11290 41.667 324 177 5 5 326 13 326 1.45e-83 256
MS.gene40613.t1 AT5G15180 38.973 331 191 6 2 326 4 329 2.02e-83 255
MS.gene40613.t1 AT2G41480 43.210 324 170 6 9 326 13 328 1.40e-82 253
MS.gene40613.t1 AT5G17820 42.623 305 162 5 22 326 22 313 3.79e-82 251
MS.gene40613.t1 AT5G17820 42.623 305 162 5 22 326 75 366 4.20e-81 251
MS.gene40613.t1 AT2G18980 44.410 322 163 6 9 326 14 323 1.50e-80 248
MS.gene40613.t1 AT5G51890 40.062 322 185 6 6 326 8 322 2.27e-80 247
MS.gene40613.t1 AT4G30170 44.156 308 162 4 22 326 25 325 9.56e-80 246
MS.gene40613.t1 AT3G21770 40.645 310 175 6 16 322 21 324 5.72e-79 244
MS.gene40613.t1 AT5G14130 40.752 319 181 5 9 326 19 330 4.57e-77 239
MS.gene40613.t1 AT4G25980 40.683 322 174 6 10 326 17 326 6.89e-77 239
MS.gene40613.t1 AT5G14130 40.752 319 181 5 9 326 60 371 1.34e-76 239
MS.gene40613.t1 AT2G39040 41.987 312 171 6 21 326 43 350 3.61e-76 238
MS.gene40613.t1 AT1G71695 41.639 305 167 6 24 326 44 339 1.57e-75 236
MS.gene40613.t1 AT1G05240 39.073 302 175 6 24 322 26 321 4.90e-75 234
MS.gene40613.t1 AT1G05250 39.073 302 175 6 24 322 26 321 4.90e-75 234
MS.gene40613.t1 AT4G37530 41.613 310 175 4 20 326 23 329 5.46e-75 234
MS.gene40613.t1 AT5G42180 40.594 303 170 7 24 325 23 316 9.25e-75 233
MS.gene40613.t1 AT3G49960 42.581 310 172 5 20 326 23 329 2.71e-74 232
MS.gene40613.t1 AT5G64110 43.046 302 160 6 28 326 38 330 1.35e-73 230
MS.gene40613.t1 AT4G37520 40.584 308 177 4 22 326 25 329 3.66e-73 229
MS.gene40613.t1 AT2G43480 39.185 319 178 8 15 326 26 335 1.61e-71 225
MS.gene40613.t1 AT5G24070 41.584 303 163 7 30 327 43 336 2.21e-71 225
MS.gene40613.t1 AT4G33420 38.462 325 185 7 3 326 15 325 1.78e-70 222
MS.gene40613.t1 AT5G64100 40.333 300 169 6 28 326 41 331 2.67e-70 222
MS.gene40613.t1 AT4G37520 39.935 308 176 5 22 326 25 326 3.19e-70 221
MS.gene40613.t1 AT5G67400 42.020 307 170 7 20 322 23 325 3.52e-70 221
MS.gene40613.t1 AT4G33420 38.820 322 182 7 6 326 65 372 1.23e-69 221
MS.gene40613.t1 AT1G77100 40.606 330 181 7 1 326 1 319 1.35e-69 220
MS.gene40613.t1 AT1G30870 39.297 313 176 6 17 326 44 345 4.75e-69 219
MS.gene40613.t1 AT5G22410 39.329 328 180 12 4 323 6 322 3.86e-67 214
MS.gene40613.t1 AT4G33870 34.718 337 179 6 24 324 68 399 6.33e-67 216
MS.gene40613.t1 AT4G26010 38.558 319 178 8 10 326 7 309 8.08e-67 212
MS.gene40613.t1 AT4G26010 38.558 319 178 8 10 326 35 337 1.45e-66 213
MS.gene40613.t1 AT2G35380 47.347 245 125 3 86 326 3 247 3.64e-66 208
MS.gene40613.t1 AT4G37530 42.636 258 144 3 20 274 23 279 3.66e-66 209
MS.gene40613.t1 AT2G34060 35.174 344 199 8 1 323 3 343 6.44e-64 206
MS.gene40613.t1 AT4G31760 37.003 327 193 6 3 326 10 326 2.86e-62 201
MS.gene40613.t1 AT2G24800 38.511 309 178 5 22 326 29 329 3.47e-62 201
MS.gene40613.t1 AT4G17690 38.235 306 177 6 24 326 26 322 6.55e-62 200
MS.gene40613.t1 AT5G47000 36.000 325 193 7 9 326 14 330 1.15e-60 197
MS.gene40613.t1 AT1G34510 36.449 321 186 8 8 326 5 309 2.15e-60 196
MS.gene40613.t1 AT4G21960 35.526 304 180 5 24 322 31 323 4.54e-59 193
MS.gene40613.t1 AT2G37130 33.871 310 192 5 21 326 27 327 1.00e-56 187
MS.gene40613.t1 AT1G24110 35.962 317 185 8 18 326 16 322 5.95e-56 185
MS.gene40613.t1 AT5G40150 34.951 309 191 5 20 326 28 328 1.42e-55 184
MS.gene40613.t1 AT2G37130 33.663 303 188 5 28 326 3 296 1.03e-54 181
MS.gene40613.t1 AT3G28200 32.797 311 194 6 20 326 17 316 6.52e-54 179
MS.gene40613.t1 AT5G39580 46.766 201 100 5 1 201 3 196 1.11e-48 163
MS.gene40613.t1 AT3G17070 33.766 308 199 4 21 326 35 339 9.93e-47 161
MS.gene40613.t1 AT4G25980 46.286 175 89 3 20 194 67 236 9.74e-45 154
MS.gene40613.t1 AT3G17070 32.700 263 171 5 66 326 18 276 5.57e-33 123
MS.gene40613.t1 AT2G24800 38.728 173 101 1 22 194 29 196 1.14e-32 122
MS.gene40613.t1 AT1G77490 27.273 264 149 11 58 308 106 339 4.21e-15 75.9
MS.gene40613.t1 AT1G77490 27.273 264 149 11 58 308 106 339 5.92e-15 75.5
MS.gene40613.t1 AT4G08390 27.099 262 152 11 58 308 127 360 1.64e-13 70.9
MS.gene40613.t1 AT4G08390 27.099 262 152 11 58 308 127 360 1.64e-13 70.9
MS.gene40613.t1 AT4G08390 27.099 262 152 11 58 308 127 360 1.64e-13 70.9
MS.gene40613.t1 AT4G08390 27.099 262 152 11 58 308 126 359 1.65e-13 70.9
MS.gene40613.t1 AT3G42570 40.000 80 46 1 97 176 53 130 2.25e-11 61.6

Find 66 sgRNAs with CRISPR-Local

Find 147 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAGTAGATCCGTTTCCATTT+TGG 0.152829 1.3:-38259749 None:intergenic
ATTGATTGTAAGAAAGTTAA+TGG 0.180377 1.3:+38260011 MS.gene40613:CDS
CACCAATCTTCTAACCAAAA+TGG 0.186383 1.3:+38259821 MS.gene40613:CDS
TGCTCAATCAATGATCAATA+TGG 0.245564 1.3:+38259947 MS.gene40613:CDS
CGTTTGGAGAAGACCCATTT+TGG 0.266541 1.3:-38259835 None:intergenic
TTGCTAAATAGGTTGTGTTT+AGG 0.275276 1.3:-38259707 None:intergenic
CACTGAAGTTGAATAGTCTT+TGG 0.281803 1.3:-38259662 None:intergenic
TGATCATTGATTGAGCAAAT+TGG 0.294809 1.3:-38259941 None:intergenic
GTTGTGTTTAGGGTTGGATC+TGG 0.301999 1.3:-38259696 None:intergenic
TGCTAAATAGGTTGTGTTTA+GGG 0.307122 1.3:-38259706 None:intergenic
TTGTTGAAGTGTTGCTAAAT+AGG 0.319158 1.3:-38259718 None:intergenic
CAACAAAATTGTCCCCAAAA+TGG 0.326346 1.3:+38259735 MS.gene40613:CDS
TAACCTTGACACTACTGATA+TGG 0.329060 1.3:+38257947 MS.gene40613:CDS
CGGATCTACTTTGAACAACT+TGG 0.336230 1.3:+38259761 MS.gene40613:CDS
TTTATAGGTGCACACACATT+TGG 0.358621 1.3:+38259615 MS.gene40613:intron
CTCACAATGGATGACACATT+AGG 0.362069 1.3:-38257287 None:intergenic
CCACGAATGGAATTAACATT+TGG 0.362905 1.3:-38257578 None:intergenic
CTACAATCTGATTCACGAAT+TGG 0.365865 1.3:+38257329 MS.gene40613:CDS
TCACAATGGATGACACATTA+GGG 0.373517 1.3:-38257286 None:intergenic
ATCCTTCTTTGTCCTTCAAA+TGG 0.387366 1.3:+38257230 MS.gene40613:CDS
GTTAATTCCATTCGTGGATT+CGG 0.390117 1.3:+38257584 MS.gene40613:CDS
CCAAATGTTAATTCCATTCG+TGG 0.404259 1.3:+38257578 MS.gene40613:CDS
GCTATTAACAATTGAGATAG+TGG 0.405538 1.3:-38259889 None:intergenic
TCTCCTTGAGTACCCGTTAA+GGG 0.417333 1.3:-38259981 None:intergenic
TTCTCCTTGAGTACCCGTTA+AGG 0.418744 1.3:-38259982 None:intergenic
ACTGAAGTTGAATAGTCTTT+GGG 0.419409 1.3:-38259661 None:intergenic
CTATTCAACTTCAGTGGTAC+TGG 0.423548 1.3:+38259669 MS.gene40613:CDS
ACCAATCTTCTAACCAAAAT+GGG 0.423614 1.3:+38259822 MS.gene40613:CDS
GGGTAATATTAGCCCCTTAA+CGG 0.428612 1.3:+38259968 MS.gene40613:CDS
TCGAATGTGTCTTGAGTTGA+TGG 0.430880 1.3:-38259786 None:intergenic
TTTGTGTGATGTTTCCTCCT+TGG 0.431614 1.3:-38257538 None:intergenic
GCATTCAATTGTCCATTTGA+AGG 0.434841 1.3:-38257242 None:intergenic
ACTGATATGGTTGCATTGTC+AGG 0.437074 1.3:+38257960 MS.gene40613:CDS
TTGTGTTTAGGGTTGGATCT+GGG 0.444167 1.3:-38259695 None:intergenic
AAATAGGTTGTGTTTAGGGT+TGG 0.456087 1.3:-38259702 None:intergenic
CCTTCATGGAATGTACTACT+TGG 0.463746 1.3:+38257825 MS.gene40613:CDS
GGTAATATTAGCCCCTTAAC+GGG 0.465814 1.3:+38259969 MS.gene40613:CDS
GCTCAATCAATGATCAATAT+GGG 0.468721 1.3:+38259948 MS.gene40613:CDS
AGCAGAATCTTCTGTGTCCT+TGG 0.471737 1.3:+38257685 MS.gene40613:CDS
GTCCATTTGAAGGACAAAGA+AGG 0.488829 1.3:-38257232 None:intergenic
TCTCTTGAAAGTTCATGCTC+TGG 0.512392 1.3:+38257629 MS.gene40613:CDS
CAAAGCAATCATGAAAATGA+AGG 0.519577 1.3:-38257367 None:intergenic
TGAGATAGTGGAAGAACCAT+TGG 0.524139 1.3:-38259877 None:intergenic
GCTCTCAAATGGAGAGGGAA+TGG 0.524931 1.3:-38257892 None:intergenic
CACAGAAGATTCTGCTGCAA+GGG 0.531206 1.3:-38257678 None:intergenic
CAAAATGGGTCTTCTCCAAA+CGG 0.536674 1.3:+38259836 MS.gene40613:CDS
ACATTGGCTAGGCTCTCAAA+TGG 0.539156 1.3:-38257903 None:intergenic
GATGGTTTAACAGCAAATCA+AGG 0.542662 1.3:+38257855 MS.gene40613:CDS
GTACTACTTGGAAGAAGAGA+TGG 0.542903 1.3:+38257837 MS.gene40613:CDS
CTCCTTGAGTACCCGTTAAG+GGG 0.548987 1.3:-38259980 None:intergenic
AATTGTCCCCAAAATGGAAA+CGG 0.549402 1.3:+38259741 MS.gene40613:CDS
ATTTAGATGTAACATTGGCT+AGG 0.563686 1.3:-38257914 None:intergenic
AGCCCCTTAACGGGTACTCA+AGG 0.575325 1.3:+38259978 MS.gene40613:CDS
AGAGAATTTAGATGTAACAT+TGG 0.578600 1.3:-38257919 None:intergenic
ACACAGAAGATTCTGCTGCA+AGG 0.581239 1.3:-38257679 None:intergenic
AACCACACCGAATCCACGAA+TGG 0.596214 1.3:-38257591 None:intergenic
CCAAGTAGTACATTCCATGA+AGG 0.596279 1.3:-38257825 None:intergenic
TTCCATTCGTGGATTCGGTG+TGG 0.600076 1.3:+38257589 MS.gene40613:CDS
TTGAACAGCATTTCTCACAA+TGG 0.602243 1.3:-38257300 None:intergenic
CAAAGACTATTCAACTTCAG+TGG 0.603781 1.3:+38259663 MS.gene40613:CDS
GGCTAGGCTCTCAAATGGAG+AGG 0.610190 1.3:-38257898 None:intergenic
CAACCATATCAGTAGTGTCA+AGG 0.611707 1.3:-38257950 None:intergenic
GCTAGGCTCTCAAATGGAGA+GGG 0.615063 1.3:-38257897 None:intergenic
CGAATGTGTCTTGAGTTGAT+GGG 0.623368 1.3:-38259785 None:intergenic
GAGTGAAAATTGCAGTCAGG+GGG 0.672593 1.3:+38257801 MS.gene40613:intron
GGTTTAACAGCAAATCAAGG+TGG 0.762041 1.3:+38257858 MS.gene40613:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TGTTAATTATTTCATTTATT+TGG + chr1.3:38257757-38257776 MS.gene40613:intron 10.0%
!!! ACAAAATTTAACTTAAAATT+AGG + chr1.3:38258876-38258895 MS.gene40613:intron 10.0%
!!! CAAAATTTAACTTAAAATTA+GGG + chr1.3:38258877-38258896 MS.gene40613:intron 10.0%
!!! GTTAAAAAATTCTATTTTTT+TGG + chr1.3:38258803-38258822 MS.gene40613:intron 10.0%
!!! TTTTCTATTTAATCTTTAAA+TGG + chr1.3:38258011-38258030 MS.gene40613:intron 10.0%
!! AGAAAAATTGGTATATTTAT+AGG + chr1.3:38258967-38258986 MS.gene40613:intron 15.0%
!! GAAAAATTGGTATATTTATA+GGG + chr1.3:38258968-38258987 MS.gene40613:intron 15.0%
!! TAATGATTAATTGAAATGTA+TGG + chr1.3:38259590-38259609 MS.gene40613:intron 15.0%
!! TCAAAAAAAAAAAATCAACT+AGG - chr1.3:38259464-38259483 None:intergenic 15.0%
!!! AAATTTCCATTTTTTGTAAA+AGG + chr1.3:38258491-38258510 MS.gene40613:intron 15.0%
!!! ATATGAATTTACTTTAAAAG+AGG - chr1.3:38258631-38258650 None:intergenic 15.0%
!!! ATTTTAAATCATTGTCATTT+AGG + chr1.3:38258158-38258177 MS.gene40613:intron 15.0%
!!! GAACAATTTTAAGTAATAAT+TGG - chr1.3:38258126-38258145 None:intergenic 15.0%
!!! GATATAATTTTAAAATCTCA+TGG - chr1.3:38258058-38258077 None:intergenic 15.0%
!!! TATGAATTTACTTTAAAAGA+GGG - chr1.3:38258630-38258649 None:intergenic 15.0%
!!! TTTTTTTTGACAAGATAATT+AGG + chr1.3:38259474-38259493 MS.gene40613:intron 15.0%
!! AAATTTCAAAGTAATTACCA+AGG - chr1.3:38257705-38257724 None:intergenic 20.0%
!! AATCATTTGTCTTTACTTAT+AGG - chr1.3:38259281-38259300 None:intergenic 20.0%
!! ACATATAGTTAGAAAATTAG+AGG - chr1.3:38257740-38257759 None:intergenic 20.0%
!! ATTGATTGTAAGAAAGTTAA+TGG + chr1.3:38260011-38260030 MS.gene40613:CDS 20.0%
!! CATATAGTTAGAAAATTAGA+GGG - chr1.3:38257739-38257758 None:intergenic 20.0%
!! TTGAAATGTATGGAATTTAT+AGG + chr1.3:38259600-38259619 MS.gene40613:intron 20.0%
!!! AAATTTTCAATCACTACTTT+TGG - chr1.3:38258904-38258923 None:intergenic 20.0%
!!! AAGTTGAAGAAATTTTTTAG+AGG - chr1.3:38258571-38258590 None:intergenic 20.0%
!!! AGTAGTGATTGAAAATTTTA+TGG + chr1.3:38258906-38258925 MS.gene40613:intron 20.0%
!!! AGTTGAAGAAATTTTTTAGA+GGG - chr1.3:38258570-38258589 None:intergenic 20.0%
!!! CATGTTTAACTCTAAAAATA+TGG + chr1.3:38259104-38259123 MS.gene40613:intron 20.0%
!!! GAAAAGTTGACATATTTTAA+GGG - chr1.3:38258539-38258558 None:intergenic 20.0%
!!! GTAGTGATTGAAAATTTTAT+GGG + chr1.3:38258907-38258926 MS.gene40613:intron 20.0%
!!! TAGTGATTGAAAATTTTATG+GGG + chr1.3:38258908-38258927 MS.gene40613:intron 20.0%
!!! TGAAAAGTTGACATATTTTA+AGG - chr1.3:38258540-38258559 None:intergenic 20.0%
!!! TTTTAAGTTCCTACAAAATT+AGG - chr1.3:38259084-38259103 None:intergenic 20.0%
! AGAACATGTATTCAAAAGTA+GGG + chr1.3:38258354-38258373 MS.gene40613:intron 25.0%
! AGAGAATTTAGATGTAACAT+TGG - chr1.3:38257922-38257941 None:intergenic 25.0%
! ATAAATCGTATTCGTTCATT+AGG + chr1.3:38257490-38257509 MS.gene40613:intron 25.0%
! ATCAAATCATGAGTCAATAT+GGG - chr1.3:38258278-38258297 None:intergenic 25.0%
! ATTGGTTAAAAAATGCTGTT+TGG - chr1.3:38259926-38259945 None:intergenic 25.0%
! GAGAGACTAAAAAGAAAAAT+TGG + chr1.3:38258955-38258974 MS.gene40613:intron 25.0%
! TAAAAGCTTGTAACTTTGTA+GGG - chr1.3:38258397-38258416 None:intergenic 25.0%
! TAAATCGTATTCGTTCATTA+GGG + chr1.3:38257491-38257510 MS.gene40613:intron 25.0%
! TAGAACATGTATTCAAAAGT+AGG + chr1.3:38258353-38258372 MS.gene40613:intron 25.0%
! TATATTAGAACTAGTCAACT+AGG - chr1.3:38259501-38259520 None:intergenic 25.0%
! TTAAAAGCTTGTAACTTTGT+AGG - chr1.3:38258398-38258417 None:intergenic 25.0%
!! GTCACTATTTTCATTTTAGA+AGG + chr1.3:38258451-38258470 MS.gene40613:intron 25.0%
!! TTGAAAACTCCTAATTTTGT+AGG + chr1.3:38259072-38259091 MS.gene40613:intron 25.0%
!!! TCATTTTAGAAGGACTATTT+TGG + chr1.3:38258461-38258480 MS.gene40613:intron 25.0%
!!! TCCATTTTTTGTAAAAGGTT+GGG + chr1.3:38258496-38258515 MS.gene40613:intron 25.0%
!!! TTCCATTTTTTGTAAAAGGT+TGG + chr1.3:38258495-38258514 MS.gene40613:intron 25.0%
AAATCGTATTCGTTCATTAG+GGG + chr1.3:38257492-38257511 MS.gene40613:intron 30.0%
AAGAACCATTGGTAGAAAAA+AGG - chr1.3:38259869-38259888 None:intergenic 30.0%
ACCAATCTTCTAACCAAAAT+GGG + chr1.3:38259822-38259841 MS.gene40613:CDS 30.0%
ACTGAAGTTGAATAGTCTTT+GGG - chr1.3:38259664-38259683 None:intergenic 30.0%
ATCACATTAGTCAGTTTGAA+TGG + chr1.3:38258099-38258118 MS.gene40613:intron 30.0%
ATTCAAACTGACTAATGTGA+TGG - chr1.3:38258100-38258119 None:intergenic 30.0%
CAAAGCAATCATGAAAATGA+AGG - chr1.3:38257370-38257389 None:intergenic 30.0%
CATCAAATCATGAGTCAATA+TGG - chr1.3:38258279-38258298 None:intergenic 30.0%
GCTATTAACAATTGAGATAG+TGG - chr1.3:38259892-38259911 None:intergenic 30.0%
GCTCAATCAATGATCAATAT+GGG + chr1.3:38259948-38259967 MS.gene40613:CDS 30.0%
TCATCTAATAATAGAGCATG+TGG + chr1.3:38258314-38258333 MS.gene40613:intron 30.0%
TGCTAAATAGGTTGTGTTTA+GGG - chr1.3:38259709-38259728 None:intergenic 30.0%
TGCTCAATCAATGATCAATA+TGG + chr1.3:38259947-38259966 MS.gene40613:CDS 30.0%
TTGCTAAATAGGTTGTGTTT+AGG - chr1.3:38259710-38259729 None:intergenic 30.0%
! AAAAAATGCTGTTTGGTTGT+TGG - chr1.3:38259919-38259938 None:intergenic 30.0%
! AAGTGAAGATGACAAACTTT+TGG - chr1.3:38258602-38258621 None:intergenic 30.0%
! ACCCAACCTTTTACAAAAAA+TGG - chr1.3:38258500-38258519 None:intergenic 30.0%
! AGTGAAGATGACAAACTTTT+GGG - chr1.3:38258601-38258620 None:intergenic 30.0%
! ATAGTCTTTGGGAGAAAAAT+TGG - chr1.3:38259653-38259672 None:intergenic 30.0%
! ATTTAGATGTAACATTGGCT+AGG - chr1.3:38257917-38257936 None:intergenic 30.0%
! GGTTGGGTTAAATATGTTTT+TGG + chr1.3:38258512-38258531 MS.gene40613:intron 30.0%
! TGATCATTGATTGAGCAAAT+TGG - chr1.3:38259944-38259963 None:intergenic 30.0%
! TGTCGATTGAAATTTAGACA+TGG + chr1.3:38258248-38258267 MS.gene40613:intron 30.0%
!! TTGTTGAAGTGTTGCTAAAT+AGG - chr1.3:38259721-38259740 None:intergenic 30.0%
!! TTTTAGAAGGACTATTTTGG+AGG + chr1.3:38258464-38258483 MS.gene40613:intron 30.0%
!!! TAATCAAAGTTTTGAAAGCG+AGG - chr1.3:38259208-38259227 None:intergenic 30.0%
AAGAGTGAAAATTGCAGTCA+GGG + chr1.3:38257799-38257818 MS.gene40613:intron 35.0%
AATTGTCCCCAAAATGGAAA+CGG + chr1.3:38259741-38259760 MS.gene40613:CDS 35.0%
ATCCTTCTTTGTCCTTCAAA+TGG + chr1.3:38257230-38257249 MS.gene40613:CDS 35.0%
CAAAGACTATTCAACTTCAG+TGG + chr1.3:38259663-38259682 MS.gene40613:CDS 35.0%
CAACAAAATTGTCCCCAAAA+TGG + chr1.3:38259735-38259754 MS.gene40613:CDS 35.0%
CACCAATCTTCTAACCAAAA+TGG + chr1.3:38259821-38259840 MS.gene40613:CDS 35.0%
CACTGAAGTTGAATAGTCTT+TGG - chr1.3:38259665-38259684 None:intergenic 35.0%
CCAAATGTTAATTCCATTCG+TGG + chr1.3:38257578-38257597 MS.gene40613:CDS 35.0%
CCACGAATGGAATTAACATT+TGG - chr1.3:38257581-38257600 None:intergenic 35.0%
CTACAATCTGATTCACGAAT+TGG + chr1.3:38257329-38257348 MS.gene40613:CDS 35.0%
GATGGTTTAACAGCAAATCA+AGG + chr1.3:38257855-38257874 MS.gene40613:CDS 35.0%
GCATTCAATTGTCCATTTGA+AGG - chr1.3:38257245-38257264 None:intergenic 35.0%
GTTAATTCCATTCGTGGATT+CGG + chr1.3:38257584-38257603 MS.gene40613:CDS 35.0%
TAACCTTGACACTACTGATA+TGG + chr1.3:38257947-38257966 MS.gene40613:CDS 35.0%
TAAGAGTGAAAATTGCAGTC+AGG + chr1.3:38257798-38257817 MS.gene40613:intron 35.0%
TCACAATGGATGACACATTA+GGG - chr1.3:38257289-38257308 None:intergenic 35.0%
TGCTTGTCAAGAAAAAGACT+TGG - chr1.3:38259526-38259545 None:intergenic 35.0%
TTGAACAGCATTTCTCACAA+TGG - chr1.3:38257303-38257322 None:intergenic 35.0%
TTTATAGGTGCACACACATT+TGG + chr1.3:38259615-38259634 MS.gene40613:intron 35.0%
! AAATAGGTTGTGTTTAGGGT+TGG - chr1.3:38259705-38259724 None:intergenic 35.0%
! AAGTAGATCCGTTTCCATTT+TGG - chr1.3:38259752-38259771 None:intergenic 35.0%
! ACTTTCAAGAGAGCTTTTGA+TGG - chr1.3:38257621-38257640 None:intergenic 35.0%
! AGTAGATCCGTTTCCATTTT+GGG - chr1.3:38259751-38259770 None:intergenic 35.0%
! CATTGGTAGAAAAAAGGTGT+TGG - chr1.3:38259863-38259882 None:intergenic 35.0%
! GTGAAGATGACAAACTTTTG+GGG - chr1.3:38258600-38258619 None:intergenic 35.0%
! TGAAGATGACAAACTTTTGG+GGG - chr1.3:38258599-38258618 None:intergenic 35.0%
!!! ACCCATTTTGGTTAGAAGAT+TGG - chr1.3:38259826-38259845 None:intergenic 35.0%
!!! CAACACCTTTTTTCTACCAA+TGG + chr1.3:38259861-38259880 MS.gene40613:CDS 35.0%
ACTGATATGGTTGCATTGTC+AGG + chr1.3:38257960-38257979 MS.gene40613:CDS 40.0%
AGAGTGAAAATTGCAGTCAG+GGG + chr1.3:38257800-38257819 MS.gene40613:intron 40.0%
CAAAATGGGTCTTCTCCAAA+CGG + chr1.3:38259836-38259855 MS.gene40613:CDS 40.0%
CAACCATATCAGTAGTGTCA+AGG - chr1.3:38257953-38257972 None:intergenic 40.0%
CCAAGTAGTACATTCCATGA+AGG - chr1.3:38257828-38257847 None:intergenic 40.0%
CCTTCATGGAATGTACTACT+TGG + chr1.3:38257825-38257844 MS.gene40613:CDS 40.0%
CGGATCTACTTTGAACAACT+TGG + chr1.3:38259761-38259780 MS.gene40613:CDS 40.0%
CTATTCAACTTCAGTGGTAC+TGG + chr1.3:38259669-38259688 MS.gene40613:CDS 40.0%
CTCACAATGGATGACACATT+AGG - chr1.3:38257290-38257309 None:intergenic 40.0%
GGGTAATATTAGCCCCTTAA+CGG + chr1.3:38259968-38259987 MS.gene40613:CDS 40.0%
GGTAATATTAGCCCCTTAAC+GGG + chr1.3:38259969-38259988 MS.gene40613:CDS 40.0%
GGTTTAACAGCAAATCAAGG+TGG + chr1.3:38257858-38257877 MS.gene40613:CDS 40.0%
GTACTACTTGGAAGAAGAGA+TGG + chr1.3:38257837-38257856 MS.gene40613:CDS 40.0%
GTCCATTTGAAGGACAAAGA+AGG - chr1.3:38257235-38257254 None:intergenic 40.0%
TCTCTTGAAAGTTCATGCTC+TGG + chr1.3:38257629-38257648 MS.gene40613:CDS 40.0%
TTTGTGTGATGTTTCCTCCT+TGG - chr1.3:38257541-38257560 None:intergenic 40.0%
! GTAGATCCGTTTCCATTTTG+GGG - chr1.3:38259750-38259769 None:intergenic 40.0%
! TCGATTTTGTTAGACCAAGG+AGG + chr1.3:38257524-38257543 MS.gene40613:CDS 40.0%
! TTGTGTTTAGGGTTGGATCT+GGG - chr1.3:38259698-38259717 None:intergenic 40.0%
!! AAAAAAGGTGTTGGTCCGTT+TGG - chr1.3:38259854-38259873 None:intergenic 40.0%
!! CGAATGTGTCTTGAGTTGAT+GGG - chr1.3:38259788-38259807 None:intergenic 40.0%
!! TCGAATGTGTCTTGAGTTGA+TGG - chr1.3:38259789-38259808 None:intergenic 40.0%
!! TGAGATAGTGGAAGAACCAT+TGG - chr1.3:38259880-38259899 None:intergenic 40.0%
ACACAGAAGATTCTGCTGCA+AGG - chr1.3:38257682-38257701 None:intergenic 45.0%
AGCAGAATCTTCTGTGTCCT+TGG + chr1.3:38257685-38257704 MS.gene40613:CDS 45.0%
CACAGAAGATTCTGCTGCAA+GGG - chr1.3:38257681-38257700 None:intergenic 45.0%
GAGTGAAAATTGCAGTCAGG+GGG + chr1.3:38257801-38257820 MS.gene40613:intron 45.0%
TCTCCTTGAGTACCCGTTAA+GGG - chr1.3:38259984-38260003 None:intergenic 45.0%
TTCTCCTTGAGTACCCGTTA+AGG - chr1.3:38259985-38260004 None:intergenic 45.0%
! ACATTGGCTAGGCTCTCAAA+TGG - chr1.3:38257906-38257925 None:intergenic 45.0%
! CGTTTGGAGAAGACCCATTT+TGG - chr1.3:38259838-38259857 None:intergenic 45.0%
! GTTGTGTTTAGGGTTGGATC+TGG - chr1.3:38259699-38259718 None:intergenic 45.0%
!!! GCGTCGATTTTGTTAGACCA+AGG + chr1.3:38257521-38257540 MS.gene40613:CDS 45.0%
!! AAATAAATAAAAATATAAGA+AGG - chr1.3:38257457-38257476 None:intergenic 5.0%
!!! AAGTAAATAAAATTTTTATA+AGG - chr1.3:38258428-38258447 None:intergenic 5.0%
!!! ATGAATTTTTATATTTTTTA+CGG + chr1.3:38258751-38258770 MS.gene40613:intron 5.0%
!!! TTATATTTTTATTTATTTAG+AGG + chr1.3:38257459-38257478 MS.gene40613:intron 5.0%
AACCACACCGAATCCACGAA+TGG - chr1.3:38257594-38257613 None:intergenic 50.0%
CTCCTTGAGTACCCGTTAAG+GGG - chr1.3:38259983-38260002 None:intergenic 50.0%
GCTAGGCTCTCAAATGGAGA+GGG - chr1.3:38257900-38257919 None:intergenic 50.0%
GCTCTCAAATGGAGAGGGAA+TGG - chr1.3:38257895-38257914 None:intergenic 50.0%
!! TTCCATTCGTGGATTCGGTG+TGG + chr1.3:38257589-38257608 MS.gene40613:CDS 50.0%
GGCTAGGCTCTCAAATGGAG+AGG - chr1.3:38257901-38257920 None:intergenic 55.0%
! AGCCCCTTAACGGGTACTCA+AGG + chr1.3:38259978-38259997 MS.gene40613:CDS 55.0%
TGCAGTCAGGGGGTCCTTCA+TGG + chr1.3:38257811-38257830 MS.gene40613:intron 60.0%


Chromosome Type Strat End Strand Name
chr1.3 gene 38257188 38260040 38257188 ID=MS.gene40613
chr1.3 mRNA 38257188 38260040 38257188 ID=MS.gene40613.t1;Parent=MS.gene40613
chr1.3 exon 38257188 38257394 38257188 ID=MS.gene40613.t1.exon1;Parent=MS.gene40613.t1
chr1.3 CDS 38257188 38257394 38257188 ID=cds.MS.gene40613.t1;Parent=MS.gene40613.t1
chr1.3 exon 38257512 38257706 38257512 ID=MS.gene40613.t1.exon2;Parent=MS.gene40613.t1
chr1.3 CDS 38257512 38257706 38257512 ID=cds.MS.gene40613.t1;Parent=MS.gene40613.t1
chr1.3 exon 38257816 38257981 38257816 ID=MS.gene40613.t1.exon3;Parent=MS.gene40613.t1
chr1.3 CDS 38257816 38257981 38257816 ID=cds.MS.gene40613.t1;Parent=MS.gene40613.t1
chr1.3 exon 38259622 38260040 38259622 ID=MS.gene40613.t1.exon4;Parent=MS.gene40613.t1
chr1.3 CDS 38259622 38260040 38259622 ID=cds.MS.gene40613.t1;Parent=MS.gene40613.t1
Gene Sequence

>MS.gene40613

ATGCTTTCTTCAACTATACAAGCTATCATTTTCTTTTCGTTAATCCTTCTTTGTCCTTCAAATGGACAATTGAATGCAACTTTCTATTCTAACACATGCCCTAATGTGTCATCCATTGTGAGAAATGCTGTTCAACAAGCTCTACAATCTGATTCACGAATTGGTGCAAGCTTAACTCGCCTTCATTTTCATGATTGCTTTGTCAATGTAAATTTCATACAACTTCATTTTATTTTATTTTATTTTGTTTTCTTCAAGAATATTATCCTTCTTATATTTTTATTTATTTAGAGGACTAATTAATAAATCGTATTCGTTCATTAGGGGTGTGACGCGTCGATTTTGTTAGACCAAGGAGGAAACATCACACAAAGCGAGAAAAACGCAGCTCCAAATGTTAATTCCATTCGTGGATTCGGTGTGGTTGACACCATCAAAAGCTCTCTTGAAAGTTCATGCTCTGGCGTTGTATCTTGCGCTGATATTCTTGCCCTTGCAGCAGAATCTTCTGTGTCCTTGGTAATTACTTTGAAATTTCATTTTTTTTTCCCTCTAATTTTCTAACTATATGTTAATTATTTCATTTATTTGGAGTTAAATGACATTTAATTAAGAGTGAAAATTGCAGTCAGGGGGTCCTTCATGGAATGTACTACTTGGAAGAAGAGATGGTTTAACAGCAAATCAAGGTGGTGCGAATAGCTCCATTCCCTCTCCATTTGAGAGCCTAGCCAATGTTACATCTAAATTCTCTGCAGTTAACCTTGACACTACTGATATGGTTGCATTGTCAGGTAACAATATATGATATACAATAGTAACTTTTTCTATTTAATCTTTAAATGGTAGATCAGACAATATTTTGATCCATGAGATTTTAAAATTATATCAATAAATAAAAAAAAATGTCCATCACATTAGTCAGTTTGAATGGACCAATTATTACTTAAAATTGTTCAAGAAGATTTAGATTTTAAATCATTGTCATTTAGGAACTAAAATGATTAACTCTATATTAATTATTTGTGAATTTGCTGATATACTCAATTTTTTAGTAGACTGTCGATTGAAATTTAGACATGGTCAACCCATATTGACTCATGATTTGATGAATTTCACTTTAATTTCATCTAATAATAGAGCATGTGGTCTTTTTTACGTATAATAGAACATGTATTCAAAAGTAGGGTTAAGTAAGTTTTTAATCCCTACAAAGTTACAAGCTTTTAAATTTAGTCCTTATAAAAATTTTATTTACTTTTAGTCACTATTTTCATTTTAGAAGGACTATTTTGGAGGACTAAAATTTCCATTTTTTGTAAAAGGTTGGGTTAAATATGTTTTTGGTCCCTTAAAATATGTCAACTTTTCATTTTAGTCCCTCTAAAAAATTTCTTCAACTTTTATTCCCCCAAAAGTTTGTCATCTTCACTTTTGATCCCTCTTTTAAAGTAAATTCATATGCATAATTTATTTTTTTAATAAACTTTTGCAGAAAATATTTCTTTCAAAAAAATAAAAATAAACTTTTGCAAAAAAATTTATAATATTATAAGAATCTATATGAATTTTTATATTTTTTACGGTTGAAAATTCATATTTAATTTTATATTTTGTTAAAAAATTCTATTTTTTTGGAAAGATTTTTACAATATTCTACACATTTCTGCATAATTTCGTTAAAAAATACAAAATTTAACTTAAAATTAGGGACCAAAAGTAGTGATTGAAAATTTTATGGGGACTAAAAGTTGAAGAAAATTTTTAGAGAGACTAAAAAGAAAAATTGGTATATTTATAGGGAGCAAAAACATATTTAACTCTAAAAAGTTTTGAAAATAAAGACTATTCTTACATACTATTAAAATTTTATAAAGATTAAACTTGAAAACTCCTAATTTTGTAGGAACTTAAAACATGTTTAACTCTAAAAATATGGTAGTGCACATGCATTGTTTTGTAATTTCGCTTCATTTCTATTATATTTTGACTAATAATGATTACTACTTTTTTCTGACCTCGCTTTCAAAACTTTGATTAAGAAATAATATATGTAATTTTCATAAACAGAAAAAAGTGATATTTTTTTACCTATAAGTAAAGACAAATGATTATATCGCTTTCAAAACTTTGATTAAGAAATAATATATGTAAATTTCATAAACAGAAAAAAGTGATATTTTTATACCTATAAGTAAAGACAAATGATTATATAAAAGAAAAAGTCATCAATTTGTTTTTTGTAAAACATATAAAAAATTATACAATTAGTACCTAGTTGATTTTTTTTTTTTGACAAGATAATTAGGACCTAGTTGACTAGTTCTAATATATACCAAGTCTTTTTCTTGACAAGCACACAAACTAATGATTTTTTTTTTTTTTTTGACAAGCACACAAACTAATGATTAATTGAAATGTATGGAATTTATAGGTGCACACACATTTGGACGTGCTCAATGCCAATTTTTCTCCCAAAGACTATTCAACTTCAGTGGTACTGGAAGCCCAGATCCAACCCTAAACACAACCTATTTAGCAACACTTCAACAAAATTGTCCCCAAAATGGAAACGGATCTACTTTGAACAACTTGGACCCATCAACTCAAGACACATTCGACAACAACTACTTCACCAATCTTCTAACCAAAATGGGTCTTCTCCAAACGGACCAACACCTTTTTTCTACCAATGGTTCTTCCACTATCTCAATTGTTAATAGCTTTGCCAACAACCAAACAGCATTTTTTAACCAATTTGCTCAATCAATGATCAATATGGGTAATATTAGCCCCTTAACGGGTACTCAAGGAGAAATCAGAATTGATTGTAAGAAAGTTAATGGAAGTTGA
Protein sequence

>MS.gene40613.t1

MLSSTIQAIIFFSLILLCPSNGQLNATFYSNTCPNVSSIVRNAVQQALQSDSRIGASLTRLHFHDCFVNGCDASILLDQGGNITQSEKNAAPNVNSIRGFGVVDTIKSSLESSCSGVVSCADILALAAESSVSLSGGPSWNVLLGRRDGLTANQGGANSSIPSPFESLANVTSKFSAVNLDTTDMVALSGAHTFGRAQCQFFSQRLFNFSGTGSPDPTLNTTYLATLQQNCPQNGNGSTLNNLDPSTQDTFDNNYFTNLLTKMGLLQTDQHLFSTNGSSTISIVNSFANNQTAFFNQFAQSMINMGNISPLTGTQGEIRIDCKKVNGS