Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene032321.t1 | XP_024628351.1 | 96.7 | 450 | 15 | 0 | 1 | 450 | 1 | 450 | 2.10E-243 | 851.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene032321.t1 | F4KGE8 | 30.5 | 407 | 238 | 14 | 63 | 436 | 161 | 555 | 6.5e-36 | 153.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene032321.t1 | A0A072TQI5 | 96.7 | 450 | 15 | 0 | 1 | 450 | 1 | 450 | 1.5e-243 | 851.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene45832 | MS.gene032321 | PPI |
| MS.gene032321 | MS.gene058492 | PPI |
| MS.gene023604 | MS.gene032321 | PPI |
| MS.gene032321 | MS.gene48940 | PPI |
| MS.gene059205 | MS.gene032321 | PPI |
| MS.gene032321 | MS.gene48223 | PPI |
| MS.gene032321 | MS.gene27831 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene032321.t1 | MTR_8g059485 | 97.333 | 450 | 12 | 0 | 1 | 450 | 1 | 450 | 0.0 | 902 |
| MS.gene032321.t1 | MTR_8g059485 | 97.333 | 450 | 12 | 0 | 1 | 450 | 10 | 459 | 0.0 | 901 |
| MS.gene032321.t1 | MTR_2g075910 | 60.537 | 484 | 146 | 13 | 1 | 453 | 1 | 470 | 0.0 | 528 |
| MS.gene032321.t1 | MTR_8g087400 | 43.319 | 464 | 231 | 8 | 1 | 437 | 1 | 459 | 9.30e-120 | 358 |
| MS.gene032321.t1 | MTR_4g025420 | 41.131 | 389 | 212 | 8 | 61 | 439 | 34 | 415 | 1.92e-88 | 276 |
| MS.gene032321.t1 | MTR_0178s0030 | 34.010 | 394 | 236 | 9 | 59 | 437 | 139 | 523 | 9.98e-60 | 204 |
| MS.gene032321.t1 | MTR_3g462150 | 30.488 | 410 | 251 | 11 | 52 | 436 | 77 | 477 | 1.55e-48 | 173 |
| MS.gene032321.t1 | MTR_5g075180 | 32.021 | 381 | 224 | 9 | 65 | 438 | 89 | 441 | 3.00e-46 | 166 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene032321.t1 | AT1G53380 | 53.407 | 455 | 190 | 8 | 1 | 437 | 1 | 451 | 5.37e-165 | 473 |
| MS.gene032321.t1 | AT1G53380 | 53.407 | 455 | 190 | 8 | 1 | 437 | 1 | 451 | 5.37e-165 | 473 |
| MS.gene032321.t1 | AT1G53380 | 53.407 | 455 | 190 | 8 | 1 | 437 | 1 | 451 | 5.37e-165 | 473 |
| MS.gene032321.t1 | AT1G53380 | 53.407 | 455 | 190 | 8 | 1 | 437 | 1 | 451 | 5.37e-165 | 473 |
| MS.gene032321.t1 | AT1G53380 | 53.407 | 455 | 190 | 8 | 1 | 437 | 1 | 451 | 5.37e-165 | 473 |
| MS.gene032321.t1 | AT3G14870 | 51.702 | 470 | 194 | 11 | 1 | 441 | 5 | 470 | 1.34e-158 | 457 |
| MS.gene032321.t1 | AT3G14870 | 51.702 | 470 | 194 | 11 | 1 | 441 | 1 | 466 | 2.18e-158 | 456 |
| MS.gene032321.t1 | AT3G14870 | 51.702 | 470 | 194 | 11 | 1 | 441 | 1 | 466 | 2.18e-158 | 456 |
| MS.gene032321.t1 | AT3G14870 | 51.702 | 470 | 194 | 11 | 1 | 441 | 1 | 466 | 2.18e-158 | 456 |
| MS.gene032321.t1 | AT3G14870 | 51.702 | 470 | 194 | 11 | 1 | 441 | 2 | 467 | 2.36e-158 | 456 |
| MS.gene032321.t1 | AT1G29300 | 41.365 | 469 | 226 | 9 | 1 | 437 | 1 | 452 | 1.72e-110 | 334 |
| MS.gene032321.t1 | AT2G45260 | 39.589 | 389 | 215 | 8 | 63 | 437 | 37 | 419 | 1.11e-86 | 271 |
| MS.gene032321.t1 | AT3G60680 | 34.715 | 386 | 229 | 10 | 64 | 437 | 120 | 494 | 6.99e-60 | 204 |
| MS.gene032321.t1 | AT2G30380 | 33.598 | 378 | 205 | 9 | 66 | 438 | 76 | 412 | 1.65e-49 | 174 |
| MS.gene032321.t1 | AT4G34080 | 36.397 | 272 | 160 | 5 | 63 | 324 | 13 | 281 | 1.12e-47 | 166 |
| MS.gene032321.t1 | AT5G58960 | 31.436 | 404 | 238 | 13 | 63 | 436 | 86 | 480 | 3.06e-46 | 167 |
| MS.gene032321.t1 | AT5G58960 | 31.436 | 404 | 238 | 13 | 63 | 436 | 86 | 480 | 3.06e-46 | 167 |
| MS.gene032321.t1 | AT5G58960 | 31.436 | 404 | 238 | 13 | 63 | 436 | 161 | 555 | 1.32e-45 | 167 |
| MS.gene032321.t1 | AT4G33320 | 33.784 | 296 | 172 | 7 | 45 | 329 | 5 | 287 | 6.25e-43 | 153 |
| MS.gene032321.t1 | AT2G32130 | 45.600 | 125 | 66 | 1 | 64 | 188 | 35 | 157 | 3.07e-25 | 101 |
| MS.gene032321.t1 | AT4G36100 | 41.935 | 93 | 49 | 2 | 63 | 152 | 13 | 103 | 5.45e-15 | 74.7 |
| MS.gene032321.t1 | AT1G12330 | 24.590 | 244 | 150 | 5 | 207 | 438 | 252 | 473 | 6.06e-11 | 64.7 |
Find 62 sgRNAs with CRISPR-Local
Find 79 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTAAAGAAAATGTTGTTTAT+AGG | 0.198493 | 8.2:+48223886 | MS.gene032321:CDS |
| AAGATGGCAAAAGGTGATTT+TGG | 0.202616 | 8.2:-48224092 | None:intergenic |
| AAAGAATGATGCCTCCATTT+TGG | 0.219724 | 8.2:-48224147 | None:intergenic |
| GCTCTTCATCTTCTTCTTCA+TGG | 0.223159 | 8.2:-48223299 | None:intergenic |
| AATTGTTGCAGCCGAATTAA+AGG | 0.260563 | 8.2:+48223545 | MS.gene032321:CDS |
| TCATTGTGATTATCGAAATA+AGG | 0.260665 | 8.2:-48223978 | None:intergenic |
| CAAGCTGAAATATTTCAAAT+AGG | 0.275982 | 8.2:+48224290 | MS.gene032321:CDS |
| GTTCACTTCATTTGCTGAAA+TGG | 0.292950 | 8.2:+48224220 | MS.gene032321:CDS |
| AAAATGGAGGCATCATTCTT+TGG | 0.328174 | 8.2:+48224149 | MS.gene032321:CDS |
| GTTTCTTAAAGAGAAGTTAG+AGG | 0.364153 | 8.2:+48223650 | MS.gene032321:CDS |
| GTTGCTTTCACCGTAGTTCC+AGG | 0.367607 | 8.2:+48224398 | MS.gene032321:CDS |
| AAGCTGAAATATTTCAAATA+GGG | 0.377206 | 8.2:+48224291 | MS.gene032321:CDS |
| AGAATCGAAGTCGCTTCTTA+AGG | 0.377855 | 8.2:+48223614 | MS.gene032321:CDS |
| GAGACTAGTTCACTCCAAAA+TGG | 0.381698 | 8.2:+48224133 | MS.gene032321:CDS |
| TTATGACCGTGATGGAATTC+AGG | 0.383293 | 8.2:+48223422 | MS.gene032321:CDS |
| ACTCTTCAGCTCCTTTAATT+CGG | 0.393760 | 8.2:-48223556 | None:intergenic |
| CTTGATAATCTACACATCTC+AGG | 0.410680 | 8.2:+48223735 | MS.gene032321:CDS |
| TCGAAGCTTTGTGAAGTTGT+TGG | 0.425314 | 8.2:+48223809 | MS.gene032321:CDS |
| GAATTCCATCACGGTCATAA+GGG | 0.426429 | 8.2:-48223419 | None:intergenic |
| TGAATTCCATCACGGTCATA+AGG | 0.426822 | 8.2:-48223420 | None:intergenic |
| GTGAACAAGTTGTTGTCATC+AGG | 0.434944 | 8.2:-48224203 | None:intergenic |
| ATAATAACCCATAAAATTGT+GGG | 0.445312 | 8.2:+48223582 | MS.gene032321:CDS |
| CATTGTGATTATCGAAATAA+GGG | 0.448793 | 8.2:-48223977 | None:intergenic |
| CTGAAATGGCTAAGAGGGTA+TGG | 0.458646 | 8.2:+48224234 | MS.gene032321:CDS |
| TATAATAACCCATAAAATTG+TGG | 0.465583 | 8.2:+48223581 | MS.gene032321:CDS |
| AATCTTAAAACCTGGAACTA+CGG | 0.469034 | 8.2:-48224408 | None:intergenic |
| GTTTATGAAATGAGATCTGC+TGG | 0.469447 | 8.2:+48223831 | MS.gene032321:CDS |
| ACTGGAGTTGCACAAGTTGA+TGG | 0.474543 | 8.2:+48223243 | MS.gene032321:CDS |
| TGAAATGAGATCTGCTGGTT+GGG | 0.479878 | 8.2:+48223836 | MS.gene032321:CDS |
| CATTTGCTGAAATGGCTAAG+AGG | 0.480109 | 8.2:+48224228 | MS.gene032321:CDS |
| TAGCTGAGTTAAAGCAATGT+TGG | 0.501226 | 8.2:+48223481 | MS.gene032321:CDS |
| TGCTGATAAATTAATAGTCT+CGG | 0.502363 | 8.2:+48223446 | MS.gene032321:CDS |
| ACCCAACAAAAGATGGCAAA+AGG | 0.514310 | 8.2:-48224101 | None:intergenic |
| ACAATTGCTCCCTCCGGTGA+AGG | 0.525485 | 8.2:-48223528 | None:intergenic |
| GCTGCAACAATTGCTCCCTC+CGG | 0.528419 | 8.2:-48223534 | None:intergenic |
| GACATGAAACAAAGGAATGT+TGG | 0.529644 | 8.2:+48224173 | MS.gene032321:CDS |
| ATTTGCTGAAATGGCTAAGA+GGG | 0.540204 | 8.2:+48224229 | MS.gene032321:CDS |
| GAAATATTTCAAATAGGGAA+AGG | 0.542615 | 8.2:+48224296 | MS.gene032321:CDS |
| AACAGAACAAGTTAATTGAA+AGG | 0.567554 | 8.2:+48223682 | MS.gene032321:CDS |
| GTATTTCACCCAACAAAAGA+TGG | 0.568758 | 8.2:-48224108 | None:intergenic |
| CTTCGTGTAAAATCAATGAC+TGG | 0.569128 | 8.2:+48223225 | MS.gene032321:CDS |
| AGAGAAGATATAAAATGTGT+AGG | 0.571896 | 8.2:-48223765 | None:intergenic |
| ATTTGAAATATTTCAGCTTG+AGG | 0.572451 | 8.2:-48224287 | None:intergenic |
| ATGAAATGAGATCTGCTGGT+TGG | 0.574092 | 8.2:+48223835 | MS.gene032321:CDS |
| ACATTGCTTTAACTCAGCTA+AGG | 0.585709 | 8.2:-48223478 | None:intergenic |
| TAGATTCTCTGATGTATACA+TGG | 0.592423 | 8.2:+48224322 | MS.gene032321:CDS |
| TATATCTTCTCTTCGCCACA+CGG | 0.595428 | 8.2:+48223776 | MS.gene032321:CDS |
| TTGATAATCTACACATCTCA+GGG | 0.598936 | 8.2:+48223736 | MS.gene032321:CDS |
| TCTTAAAGAGAAGTTAGAGG+AGG | 0.599840 | 8.2:+48223653 | MS.gene032321:CDS |
| AATTCCATCACGGTCATAAG+GGG | 0.601774 | 8.2:-48223418 | None:intergenic |
| CGAGCTAGTTTACTCTTGTG+TGG | 0.604460 | 8.2:-48223186 | None:intergenic |
| GAAAGGAGGTTAAATCAAAG+TGG | 0.604775 | 8.2:+48223699 | MS.gene032321:CDS |
| AGAACAAGTTAATTGAAAGG+AGG | 0.617633 | 8.2:+48223685 | MS.gene032321:CDS |
| GTTAAAATCAGTGAATGCAA+AGG | 0.621096 | 8.2:+48224052 | MS.gene032321:CDS |
| GAATCCCCTTATGACCGTGA+TGG | 0.621817 | 8.2:+48223414 | MS.gene032321:CDS |
| TAATAACCCATAAAATTGTG+GGG | 0.649171 | 8.2:+48223583 | MS.gene032321:CDS |
| TCTTTGGTGACATGAAACAA+AGG | 0.654420 | 8.2:+48224165 | MS.gene032321:CDS |
| TTCGAATTGATTTAACCGTG+TGG | 0.660124 | 8.2:-48223791 | None:intergenic |
| TGTGATTATCGAAATAAGGG+AGG | 0.664917 | 8.2:-48223974 | None:intergenic |
| CAGCATCCTGAATTCCATCA+CGG | 0.672142 | 8.2:-48223428 | None:intergenic |
| ACTAGTTCACTCCAAAATGG+AGG | 0.674833 | 8.2:+48224136 | MS.gene032321:CDS |
| GTGGCTGTAATAACTGTGAG+AGG | 0.692386 | 8.2:-48224460 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTAAAGAAAATGTTGTTTAT+AGG | + | chr8.2:48223886-48223905 | MS.gene032321:CDS | 15.0% |
| !! | AAGCTGAAATATTTCAAATA+GGG | + | chr8.2:48224291-48224310 | MS.gene032321:CDS | 20.0% |
| !! | ATAATAACCCATAAAATTGT+GGG | + | chr8.2:48223582-48223601 | MS.gene032321:CDS | 20.0% |
| !! | TATAATAACCCATAAAATTG+TGG | + | chr8.2:48223581-48223600 | MS.gene032321:CDS | 20.0% |
| !!! | AACAAAACACAATTTTTCTT+TGG | + | chr8.2:48224017-48224036 | MS.gene032321:CDS | 20.0% |
| !!! | AATTGTGTTTTGTTTTTATC+AGG | - | chr8.2:48224011-48224030 | None:intergenic | 20.0% |
| !!! | ACAAAACACAATTTTTCTTT+GGG | + | chr8.2:48224018-48224037 | MS.gene032321:CDS | 20.0% |
| ! | AACAGAACAAGTTAATTGAA+AGG | + | chr8.2:48223682-48223701 | MS.gene032321:CDS | 25.0% |
| ! | AGAGAAGATATAAAATGTGT+AGG | - | chr8.2:48223768-48223787 | None:intergenic | 25.0% |
| ! | CAAGCTGAAATATTTCAAAT+AGG | + | chr8.2:48224290-48224309 | MS.gene032321:CDS | 25.0% |
| ! | CATTGTGATTATCGAAATAA+GGG | - | chr8.2:48223980-48223999 | None:intergenic | 25.0% |
| ! | GAAATATTTCAAATAGGGAA+AGG | + | chr8.2:48224296-48224315 | MS.gene032321:CDS | 25.0% |
| ! | TAATAACCCATAAAATTGTG+GGG | + | chr8.2:48223583-48223602 | MS.gene032321:CDS | 25.0% |
| ! | TCATTGTGATTATCGAAATA+AGG | - | chr8.2:48223981-48224000 | None:intergenic | 25.0% |
| ! | TGCTGATAAATTAATAGTCT+CGG | + | chr8.2:48223446-48223465 | MS.gene032321:CDS | 25.0% |
| !! | ATTTGAAATATTTCAGCTTG+AGG | - | chr8.2:48224290-48224309 | None:intergenic | 25.0% |
| AATCTTAAAACCTGGAACTA+CGG | - | chr8.2:48224411-48224430 | None:intergenic | 30.0% | |
| AGAACAAGTTAATTGAAAGG+AGG | + | chr8.2:48223685-48223704 | MS.gene032321:CDS | 30.0% | |
| GTTAAAATCAGTGAATGCAA+AGG | + | chr8.2:48224052-48224071 | MS.gene032321:CDS | 30.0% | |
| GTTTCTTAAAGAGAAGTTAG+AGG | + | chr8.2:48223650-48223669 | MS.gene032321:CDS | 30.0% | |
| TAGATTCTCTGATGTATACA+TGG | + | chr8.2:48224322-48224341 | MS.gene032321:CDS | 30.0% | |
| TGAAGAGCTTAAGAAAAAAG+TGG | + | chr8.2:48223314-48223333 | MS.gene032321:CDS | 30.0% | |
| ! | AAACACAATTTTTCTTTGGG+AGG | + | chr8.2:48224021-48224040 | MS.gene032321:CDS | 30.0% |
| ! | GTTTTACCAATCTTAAAACC+TGG | - | chr8.2:48224419-48224438 | None:intergenic | 30.0% |
| ! | TTGATAATCTACACATCTCA+GGG | + | chr8.2:48223736-48223755 | MS.gene032321:CDS | 30.0% |
| !! | AATTGAGTCTTTTGTTTGCA+GGG | + | chr8.2:48223932-48223951 | MS.gene032321:CDS | 30.0% |
| !! | ATTCAATTTTGATCCTTCAC+CGG | + | chr8.2:48223515-48223534 | MS.gene032321:CDS | 30.0% |
| AATTGTTGCAGCCGAATTAA+AGG | + | chr8.2:48223545-48223564 | MS.gene032321:CDS | 35.0% | |
| ACATTGCTTTAACTCAGCTA+AGG | - | chr8.2:48223481-48223500 | None:intergenic | 35.0% | |
| ACTCTTCAGCTCCTTTAATT+CGG | - | chr8.2:48223559-48223578 | None:intergenic | 35.0% | |
| CTTCGTGTAAAATCAATGAC+TGG | + | chr8.2:48223225-48223244 | MS.gene032321:CDS | 35.0% | |
| GAAAGGAGGTTAAATCAAAG+TGG | + | chr8.2:48223699-48223718 | MS.gene032321:CDS | 35.0% | |
| GACATGAAACAAAGGAATGT+TGG | + | chr8.2:48224173-48224192 | MS.gene032321:CDS | 35.0% | |
| GTATTTCACCCAACAAAAGA+TGG | - | chr8.2:48224111-48224130 | None:intergenic | 35.0% | |
| GTTTATGAAATGAGATCTGC+TGG | + | chr8.2:48223831-48223850 | MS.gene032321:CDS | 35.0% | |
| TAGCTGAGTTAAAGCAATGT+TGG | + | chr8.2:48223481-48223500 | MS.gene032321:CDS | 35.0% | |
| TCTTAAAGAGAAGTTAGAGG+AGG | + | chr8.2:48223653-48223672 | MS.gene032321:CDS | 35.0% | |
| TGTGATTATCGAAATAAGGG+AGG | - | chr8.2:48223977-48223996 | None:intergenic | 35.0% | |
| ! | AAAGAATGATGCCTCCATTT+TGG | - | chr8.2:48224150-48224169 | None:intergenic | 35.0% |
| ! | AAGATGGCAAAAGGTGATTT+TGG | - | chr8.2:48224095-48224114 | None:intergenic | 35.0% |
| ! | ACCTTTTGCCATCTTTTGTT+GGG | + | chr8.2:48224100-48224119 | MS.gene032321:CDS | 35.0% |
| ! | ACTTCTTCCCCACAATTTTA+TGG | - | chr8.2:48223593-48223612 | None:intergenic | 35.0% |
| ! | ATTTGCTGAAATGGCTAAGA+GGG | + | chr8.2:48224229-48224248 | MS.gene032321:CDS | 35.0% |
| ! | CTTCTTCCCCACAATTTTAT+GGG | - | chr8.2:48223592-48223611 | None:intergenic | 35.0% |
| ! | CTTGATAATCTACACATCTC+AGG | + | chr8.2:48223735-48223754 | MS.gene032321:CDS | 35.0% |
| ! | GTTCACTTCATTTGCTGAAA+TGG | + | chr8.2:48224220-48224239 | MS.gene032321:CDS | 35.0% |
| ! | TCTTTGGTGACATGAAACAA+AGG | + | chr8.2:48224165-48224184 | MS.gene032321:CDS | 35.0% |
| ! | TTCGAATTGATTTAACCGTG+TGG | - | chr8.2:48223794-48223813 | None:intergenic | 35.0% |
| ! | TTTCTTTTCACTTGAGCTTG+TGG | - | chr8.2:48224482-48224501 | None:intergenic | 35.0% |
| !! | AAAATGGAGGCATCATTCTT+TGG | + | chr8.2:48224149-48224168 | MS.gene032321:CDS | 35.0% |
| !! | CAATTGAGTCTTTTGTTTGC+AGG | + | chr8.2:48223931-48223950 | MS.gene032321:CDS | 35.0% |
| !!! | GTAGTTCCAGGTTTTAAGAT+TGG | + | chr8.2:48224410-48224429 | MS.gene032321:CDS | 35.0% |
| AATTCCATCACGGTCATAAG+GGG | - | chr8.2:48223421-48223440 | None:intergenic | 40.0% | |
| ACCCAACAAAAGATGGCAAA+AGG | - | chr8.2:48224104-48224123 | None:intergenic | 40.0% | |
| ACTAGTTCACTCCAAAATGG+AGG | + | chr8.2:48224136-48224155 | MS.gene032321:CDS | 40.0% | |
| AGAATCGAAGTCGCTTCTTA+AGG | + | chr8.2:48223614-48223633 | MS.gene032321:CDS | 40.0% | |
| ATGAAATGAGATCTGCTGGT+TGG | + | chr8.2:48223835-48223854 | MS.gene032321:CDS | 40.0% | |
| GAATTCCATCACGGTCATAA+GGG | - | chr8.2:48223422-48223441 | None:intergenic | 40.0% | |
| GCTCTTCATCTTCTTCTTCA+TGG | - | chr8.2:48223302-48223321 | None:intergenic | 40.0% | |
| GTGAACAAGTTGTTGTCATC+AGG | - | chr8.2:48224206-48224225 | None:intergenic | 40.0% | |
| TATATCTTCTCTTCGCCACA+CGG | + | chr8.2:48223776-48223795 | MS.gene032321:CDS | 40.0% | |
| TGAATTCCATCACGGTCATA+AGG | - | chr8.2:48223423-48223442 | None:intergenic | 40.0% | |
| ! | CACCTTTTGCCATCTTTTGT+TGG | + | chr8.2:48224099-48224118 | MS.gene032321:CDS | 40.0% |
| ! | CATTTGCTGAAATGGCTAAG+AGG | + | chr8.2:48224228-48224247 | MS.gene032321:CDS | 40.0% |
| ! | GAGACTAGTTCACTCCAAAA+TGG | + | chr8.2:48224133-48224152 | MS.gene032321:CDS | 40.0% |
| ! | TCGAAGCTTTGTGAAGTTGT+TGG | + | chr8.2:48223809-48223828 | MS.gene032321:CDS | 40.0% |
| ! | TGAAATGAGATCTGCTGGTT+GGG | + | chr8.2:48223836-48223855 | MS.gene032321:CDS | 40.0% |
| ! | TTATGACCGTGATGGAATTC+AGG | + | chr8.2:48223422-48223441 | MS.gene032321:CDS | 40.0% |
| !! | AATTTTGATCCTTCACCGGA+GGG | + | chr8.2:48223519-48223538 | MS.gene032321:CDS | 40.0% |
| CAGCATCCTGAATTCCATCA+CGG | - | chr8.2:48223431-48223450 | None:intergenic | 45.0% | |
| CTGAAATGGCTAAGAGGGTA+TGG | + | chr8.2:48224234-48224253 | MS.gene032321:CDS | 45.0% | |
| GTGGCTGTAATAACTGTGAG+AGG | - | chr8.2:48224463-48224482 | None:intergenic | 45.0% | |
| ! | ACTGGAGTTGCACAAGTTGA+TGG | + | chr8.2:48223243-48223262 | MS.gene032321:CDS | 45.0% |
| ! | CGAGCTAGTTTACTCTTGTG+TGG | - | chr8.2:48223189-48223208 | None:intergenic | 45.0% |
| !! | CAATTTTGATCCTTCACCGG+AGG | + | chr8.2:48223518-48223537 | MS.gene032321:CDS | 45.0% |
| GAATCCCCTTATGACCGTGA+TGG | + | chr8.2:48223414-48223433 | MS.gene032321:CDS | 50.0% | |
| ! | GTTGCTTTCACCGTAGTTCC+AGG | + | chr8.2:48224398-48224417 | MS.gene032321:CDS | 50.0% |
| ACAATTGCTCCCTCCGGTGA+AGG | - | chr8.2:48223531-48223550 | None:intergenic | 55.0% | |
| GCTGCAACAATTGCTCCCTC+CGG | - | chr8.2:48223537-48223556 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.2 | gene | 48223156 | 48224517 | 48223156 | ID=MS.gene032321 |
| chr8.2 | mRNA | 48223156 | 48224517 | 48223156 | ID=MS.gene032321.t1;Parent=MS.gene032321 |
| chr8.2 | exon | 48223156 | 48224517 | 48223156 | ID=MS.gene032321.t1.exon1;Parent=MS.gene032321.t1 |
| chr8.2 | CDS | 48223156 | 48224517 | 48223156 | ID=cds.MS.gene032321.t1;Parent=MS.gene032321.t1 |
| Gene Sequence |
| Protein sequence |
