Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene023604.t1 | RHN42672.1 | 97.4 | 466 | 12 | 0 | 1 | 466 | 14 | 479 | 4.50E-249 | 870.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene023604.t1 | F4KGE8 | 29.3 | 406 | 251 | 7 | 79 | 458 | 160 | 555 | 1.8e-33 | 145.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene023604.t1 | G7L787 | 97.4 | 466 | 12 | 0 | 1 | 466 | 1 | 466 | 3.2e-249 | 870.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene023604 | MS.gene48940 | PPI |
| MS.gene023604 | MS.gene026867 | PPI |
| MS.gene023604 | MS.gene32238 | PPI |
| MS.gene023604 | MS.gene032321 | PPI |
| MS.gene023604 | MS.gene45832 | PPI |
| MS.gene023604 | MS.gene48223 | PPI |
| MS.gene023604 | MS.gene63724 | PPI |
| MS.gene023604 | MS.gene059205 | PPI |
| MS.gene007857 | MS.gene023604 | PPI |
| MS.gene59941 | MS.gene023604 | PPI |
| MS.gene38998 | MS.gene023604 | PPI |
| MS.gene060213 | MS.gene023604 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene023604.t1 | MTR_8g087400 | 97.854 | 466 | 10 | 0 | 1 | 466 | 1 | 466 | 0.0 | 942 |
| MS.gene023604.t1 | MTR_2g075910 | 44.156 | 462 | 245 | 6 | 1 | 458 | 1 | 453 | 1.20e-121 | 363 |
| MS.gene023604.t1 | MTR_8g059485 | 43.226 | 465 | 230 | 9 | 1 | 459 | 10 | 446 | 5.67e-117 | 351 |
| MS.gene023604.t1 | MTR_8g059485 | 43.226 | 465 | 230 | 9 | 1 | 459 | 1 | 437 | 6.17e-117 | 350 |
| MS.gene023604.t1 | MTR_4g025420 | 39.000 | 400 | 214 | 5 | 74 | 459 | 30 | 413 | 1.18e-94 | 292 |
| MS.gene023604.t1 | MTR_0178s0030 | 33.656 | 413 | 245 | 6 | 62 | 459 | 125 | 523 | 5.75e-64 | 216 |
| MS.gene023604.t1 | MTR_3g462150 | 28.967 | 397 | 255 | 5 | 79 | 458 | 91 | 477 | 4.20e-51 | 180 |
| MS.gene023604.t1 | MTR_5g075180 | 30.526 | 475 | 279 | 12 | 4 | 465 | 10 | 446 | 2.96e-50 | 177 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene023604.t1 | AT1G29300 | 53.846 | 481 | 185 | 9 | 1 | 466 | 1 | 459 | 2.20e-167 | 479 |
| MS.gene023604.t1 | AT3G14870 | 44.872 | 468 | 243 | 8 | 1 | 459 | 5 | 466 | 2.55e-130 | 385 |
| MS.gene023604.t1 | AT3G14870 | 44.872 | 468 | 243 | 8 | 1 | 459 | 2 | 463 | 3.24e-130 | 385 |
| MS.gene023604.t1 | AT3G14870 | 44.872 | 468 | 243 | 8 | 1 | 459 | 1 | 462 | 3.31e-130 | 385 |
| MS.gene023604.t1 | AT3G14870 | 44.872 | 468 | 243 | 8 | 1 | 459 | 1 | 462 | 3.31e-130 | 385 |
| MS.gene023604.t1 | AT3G14870 | 44.872 | 468 | 243 | 8 | 1 | 459 | 1 | 462 | 3.31e-130 | 385 |
| MS.gene023604.t1 | AT1G53380 | 43.803 | 468 | 239 | 5 | 1 | 460 | 1 | 452 | 3.04e-128 | 380 |
| MS.gene023604.t1 | AT1G53380 | 43.803 | 468 | 239 | 5 | 1 | 460 | 1 | 452 | 3.04e-128 | 380 |
| MS.gene023604.t1 | AT1G53380 | 43.803 | 468 | 239 | 5 | 1 | 460 | 1 | 452 | 3.04e-128 | 380 |
| MS.gene023604.t1 | AT1G53380 | 43.803 | 468 | 239 | 5 | 1 | 460 | 1 | 452 | 3.04e-128 | 380 |
| MS.gene023604.t1 | AT1G53380 | 43.803 | 468 | 239 | 5 | 1 | 460 | 1 | 452 | 3.04e-128 | 380 |
| MS.gene023604.t1 | AT2G45260 | 40.351 | 399 | 219 | 4 | 74 | 461 | 31 | 421 | 2.09e-97 | 300 |
| MS.gene023604.t1 | AT3G60680 | 34.625 | 387 | 233 | 5 | 81 | 459 | 120 | 494 | 5.09e-73 | 239 |
| MS.gene023604.t1 | AT2G30380 | 32.915 | 398 | 216 | 8 | 67 | 459 | 60 | 411 | 1.05e-56 | 193 |
| MS.gene023604.t1 | AT4G34080 | 36.727 | 275 | 163 | 3 | 74 | 337 | 7 | 281 | 3.42e-54 | 183 |
| MS.gene023604.t1 | AT4G33320 | 35.821 | 268 | 160 | 4 | 74 | 329 | 7 | 274 | 6.31e-49 | 169 |
| MS.gene023604.t1 | AT5G58960 | 29.803 | 406 | 249 | 7 | 79 | 458 | 85 | 480 | 4.17e-45 | 164 |
| MS.gene023604.t1 | AT5G58960 | 29.803 | 406 | 249 | 7 | 79 | 458 | 85 | 480 | 4.17e-45 | 164 |
| MS.gene023604.t1 | AT5G58960 | 29.803 | 406 | 249 | 7 | 79 | 458 | 160 | 555 | 1.66e-44 | 164 |
| MS.gene023604.t1 | AT2G32130 | 57.724 | 123 | 52 | 0 | 80 | 202 | 34 | 156 | 6.35e-43 | 149 |
| MS.gene023604.t1 | AT4G36100 | 43.636 | 110 | 57 | 2 | 74 | 178 | 7 | 116 | 6.30e-21 | 92.0 |
Find 58 sgRNAs with CRISPR-Local
Find 78 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCTTGTTCATTGCTGATTT+TGG | 0.079747 | 4.4:-13324505 | None:intergenic |
| TTCTAATTCCGGCGAGTTTC+GGG | 0.120775 | 4.4:+13325776 | MS.gene023604:CDS |
| ATGGACAACTTGATGATATT+TGG | 0.163563 | 4.4:-13325496 | None:intergenic |
| ATTCTAATTCCGGCGAGTTT+CGG | 0.208130 | 4.4:+13325775 | MS.gene023604:CDS |
| ATTTGTCAAAATAGTGATTT+TGG | 0.234573 | 4.4:-13325395 | None:intergenic |
| GATTCTATTGATTCTAATTC+CGG | 0.300156 | 4.4:+13325765 | MS.gene023604:CDS |
| CGGAGATGGCAAAGCGCGTT+TGG | 0.317538 | 4.4:+13325613 | MS.gene023604:CDS |
| TTCTCCTTGAAGCTTCTTGA+TGG | 0.321429 | 4.4:-13324980 | None:intergenic |
| CTTCTTGATGGTGATTTCAT+AGG | 0.327494 | 4.4:-13324968 | None:intergenic |
| TTCTTATTGATCTCAAAGTA+TGG | 0.329293 | 4.4:-13325170 | None:intergenic |
| GAGTCAGGTTTATCTGTCTT+TGG | 0.330222 | 4.4:+13325848 | MS.gene023604:CDS |
| CAGAGGAAGCTAGTGAATTC+TGG | 0.337395 | 4.4:+13325555 | MS.gene023604:CDS |
| TCAAGTTGTCCATGCTAAAA+TGG | 0.340049 | 4.4:+13325506 | MS.gene023604:CDS |
| GAAACTTATGATTGAAGAAA+TGG | 0.349019 | 4.4:+13325200 | MS.gene023604:CDS |
| TCAGTTTCAACTTCATGTTC+AGG | 0.353607 | 4.4:+13325741 | MS.gene023604:CDS |
| AAAATGGAGTGTTCTTTGTT+TGG | 0.368125 | 4.4:+13325522 | MS.gene023604:CDS |
| AAGAAATGGAATCAGCAAAC+TGG | 0.369176 | 4.4:+13325214 | MS.gene023604:CDS |
| CGTTTGGACACTGCATTACT+TGG | 0.373882 | 4.4:+13325629 | MS.gene023604:CDS |
| GATTCAACATTGAAAGTTCA+AGG | 0.402308 | 4.4:-13325122 | None:intergenic |
| AACTTGGCAAAAGATGAGTT+TGG | 0.414833 | 4.4:-13325465 | None:intergenic |
| TTCTAACCTTGTTCTTCTGT+TGG | 0.416097 | 4.4:-13324690 | None:intergenic |
| GGTTAGAAACAAAGCAGTTA+TGG | 0.418035 | 4.4:+13324705 | MS.gene023604:CDS |
| GGTTTGGTGAAAACTGCATT+TGG | 0.434711 | 4.4:-13325267 | None:intergenic |
| AAAACAACGATGACTTGGTT+TGG | 0.448235 | 4.4:-13325283 | None:intergenic |
| GTTTGCATAACAATGTTTGA+AGG | 0.448726 | 4.4:+13325321 | MS.gene023604:CDS |
| ATCATATGCAGAACTTCAAA+TGG | 0.451722 | 4.4:+13324774 | MS.gene023604:CDS |
| TAGGTTCTCTGAGGTTTACA+TGG | 0.451972 | 4.4:+13325701 | MS.gene023604:CDS |
| ATCACCATCAAGAAGCTTCA+AGG | 0.452355 | 4.4:+13324976 | MS.gene023604:CDS |
| CAGAATTCACTAGCTTCCTC+TGG | 0.453524 | 4.4:-13325554 | None:intergenic |
| CAGTTTCAACTTCATGTTCA+GGG | 0.460825 | 4.4:+13325742 | MS.gene023604:CDS |
| TGTATTGAATCATTGTTGTA+AGG | 0.470099 | 4.4:-13324805 | None:intergenic |
| TAAGACAGTGATACAGAGTC+AGG | 0.472174 | 4.4:+13325833 | MS.gene023604:CDS |
| TCAGGTTTATCTGTCTTTGG+TGG | 0.472612 | 4.4:+13325851 | MS.gene023604:CDS |
| TTCAGGTCAAGAAGAATACT+AGG | 0.473719 | 4.4:+13325682 | MS.gene023604:CDS |
| CCATCTCAGAATTGAAAAGA+AGG | 0.510329 | 4.4:+13324863 | MS.gene023604:CDS |
| AAAGCAAAACAACGATGACT+TGG | 0.515541 | 4.4:-13325288 | None:intergenic |
| AGAAATGGAATCAGCAAACT+GGG | 0.539408 | 4.4:+13325215 | MS.gene023604:CDS |
| TTTGGTGAATATTGTGAAGA+GGG | 0.541008 | 4.4:-13325377 | None:intergenic |
| CAAAATCAGCAATGAACAAG+AGG | 0.553083 | 4.4:+13324506 | MS.gene023604:CDS |
| TGGTGAAAACTGCATTTGGA+TGG | 0.559887 | 4.4:-13325263 | None:intergenic |
| GTGGTGCCTGGTTTCAACAT+TGG | 0.564074 | 4.4:+13325810 | MS.gene023604:CDS |
| TAATTCCGGCGAGTTTCGGG+TGG | 0.572386 | 4.4:+13325779 | MS.gene023604:CDS |
| AGCAGCTGATCAAGCAGTGG+TGG | 0.584305 | 4.4:+13324828 | MS.gene023604:CDS |
| GAAAACCACCCGAAACTCGC+CGG | 0.587240 | 4.4:-13325784 | None:intergenic |
| ATTTGATGGTGATCTGTGAA+AGG | 0.594388 | 4.4:-13324649 | None:intergenic |
| AGTTTCAACTTCATGTTCAG+GGG | 0.594405 | 4.4:+13325743 | MS.gene023604:CDS |
| CAACTCACATCTCAAAGTGA+AGG | 0.600233 | 4.4:+13324615 | MS.gene023604:CDS |
| TGTTTGGAAATTTGAACCAG+AGG | 0.621071 | 4.4:+13325538 | MS.gene023604:CDS |
| ATTTGCAAAGACATTCCAGA+AGG | 0.624146 | 4.4:+13324537 | MS.gene023604:CDS |
| TTATGGAGGCTCTAATAGCA+AGG | 0.629498 | 4.4:+13324722 | MS.gene023604:CDS |
| AGGAAGCTAGTGAATTCTGG+AGG | 0.632294 | 4.4:+13325558 | MS.gene023604:CDS |
| GCTAGCATTATAGTAACTTG+AGG | 0.633614 | 4.4:-13324913 | None:intergenic |
| GTCTTACCAATGTTGAAACC+AGG | 0.633731 | 4.4:-13325816 | None:intergenic |
| TAGAAACAAAGCAGTTATGG+AGG | 0.646650 | 4.4:+13324708 | MS.gene023604:CDS |
| GAAGAATACTAGGTTCTCTG+AGG | 0.672182 | 4.4:+13325692 | MS.gene023604:CDS |
| GGAAGCTAGTGAATTCTGGA+GGG | 0.675270 | 4.4:+13325559 | MS.gene023604:CDS |
| ACAAGCAGCTGATCAAGCAG+TGG | 0.679340 | 4.4:+13324825 | MS.gene023604:CDS |
| TAAGCACCAACAGAAGAACA+AGG | 0.710444 | 4.4:+13324684 | MS.gene023604:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ACAAAAATTGCTTCAAATAA+TGG | + | chr4.4:13324580-13324599 | MS.gene023604:CDS | 20.0% |
| !!! | ATATTTGGATTTTAGAAACT+TGG | - | chr4.4:13325484-13325503 | None:intergenic | 20.0% |
| !!! | ATTTGTCAAAATAGTGATTT+TGG | - | chr4.4:13325398-13325417 | None:intergenic | 20.0% |
| !!! | TACTATTAGTTTTCATTTGA+TGG | - | chr4.4:13324666-13324685 | None:intergenic | 20.0% |
| ! | GAAACTTATGATTGAAGAAA+TGG | + | chr4.4:13325200-13325219 | MS.gene023604:CDS | 25.0% |
| ! | TGTATTGAATCATTGTTGTA+AGG | - | chr4.4:13324808-13324827 | None:intergenic | 25.0% |
| ! | TTCTTATTGATCTCAAAGTA+TGG | - | chr4.4:13325173-13325192 | None:intergenic | 25.0% |
| !!! | ACTATTTTGACAAATTCAAG+AGG | + | chr4.4:13325403-13325422 | MS.gene023604:CDS | 25.0% |
| !!! | GATTCTATTGATTCTAATTC+CGG | + | chr4.4:13325765-13325784 | MS.gene023604:CDS | 25.0% |
| !!! | TTGTTTTCTAAGTACTGTTT+TGG | - | chr4.4:13325444-13325463 | None:intergenic | 25.0% |
| ATCATATGCAGAACTTCAAA+TGG | + | chr4.4:13324774-13324793 | MS.gene023604:CDS | 30.0% | |
| GATTCAACATTGAAAGTTCA+AGG | - | chr4.4:13325125-13325144 | None:intergenic | 30.0% | |
| GTTTGCATAACAATGTTTGA+AGG | + | chr4.4:13325321-13325340 | MS.gene023604:CDS | 30.0% | |
| TTTGGTGAATATTGTGAAGA+GGG | - | chr4.4:13325380-13325399 | None:intergenic | 30.0% | |
| ! | AAAATGGAGTGTTCTTTGTT+TGG | + | chr4.4:13325522-13325541 | MS.gene023604:CDS | 30.0% |
| ! | AGAAGATGTTAGCATTTTTC+AGG | + | chr4.4:13325665-13325684 | MS.gene023604:CDS | 30.0% |
| ! | ATGGACAACTTGATGATATT+TGG | - | chr4.4:13325499-13325518 | None:intergenic | 30.0% |
| ! | TTCTGCATATGATGCTTTTA+TGG | - | chr4.4:13324767-13324786 | None:intergenic | 30.0% |
| ! | TTTTGGTGAATATTGTGAAG+AGG | - | chr4.4:13325381-13325400 | None:intergenic | 30.0% |
| !!! | ACTCATCAAGTTTTTTTCTG+AGG | - | chr4.4:13325035-13325054 | None:intergenic | 30.0% |
| !!! | AGCTTTTTTCTTAGCTTTTG+CGG | + | chr4.4:13325593-13325612 | MS.gene023604:CDS | 30.0% |
| !!! | CTCATCAAGTTTTTTTCTGA+GGG | - | chr4.4:13325034-13325053 | None:intergenic | 30.0% |
| AAAGCAAAACAACGATGACT+TGG | - | chr4.4:13325291-13325310 | None:intergenic | 35.0% | |
| AACTTGGCAAAAGATGAGTT+TGG | - | chr4.4:13325468-13325487 | None:intergenic | 35.0% | |
| AAGAAATGGAATCAGCAAAC+TGG | + | chr4.4:13325214-13325233 | MS.gene023604:CDS | 35.0% | |
| AGAAATGGAATCAGCAAACT+GGG | + | chr4.4:13325215-13325234 | MS.gene023604:CDS | 35.0% | |
| AGTTTCAACTTCATGTTCAG+GGG | + | chr4.4:13325743-13325762 | MS.gene023604:CDS | 35.0% | |
| ATTTGCAAAGACATTCCAGA+AGG | + | chr4.4:13324537-13324556 | MS.gene023604:CDS | 35.0% | |
| CAAAATCAGCAATGAACAAG+AGG | + | chr4.4:13324506-13324525 | MS.gene023604:CDS | 35.0% | |
| CAGTTTCAACTTCATGTTCA+GGG | + | chr4.4:13325742-13325761 | MS.gene023604:CDS | 35.0% | |
| CCATCTCAGAATTGAAAAGA+AGG | + | chr4.4:13324863-13324882 | MS.gene023604:CDS | 35.0% | |
| GCTAAGAAAAAAGCTGAATC+TGG | - | chr4.4:13325588-13325607 | None:intergenic | 35.0% | |
| GCTAGCATTATAGTAACTTG+AGG | - | chr4.4:13324916-13324935 | None:intergenic | 35.0% | |
| GGTTAGAAACAAAGCAGTTA+TGG | + | chr4.4:13324705-13324724 | MS.gene023604:CDS | 35.0% | |
| TAGAAACAAAGCAGTTATGG+AGG | + | chr4.4:13324708-13324727 | MS.gene023604:CDS | 35.0% | |
| TCAGTTTCAACTTCATGTTC+AGG | + | chr4.4:13325741-13325760 | MS.gene023604:CDS | 35.0% | |
| TGTTTGGAAATTTGAACCAG+AGG | + | chr4.4:13325538-13325557 | MS.gene023604:CDS | 35.0% | |
| TTCAGGTCAAGAAGAATACT+AGG | + | chr4.4:13325682-13325701 | MS.gene023604:CDS | 35.0% | |
| TTCTAACCTTGTTCTTCTGT+TGG | - | chr4.4:13324693-13324712 | None:intergenic | 35.0% | |
| ! | TCAAGTTGTCCATGCTAAAA+TGG | + | chr4.4:13325506-13325525 | MS.gene023604:CDS | 35.0% |
| !! | AAAACAACGATGACTTGGTT+TGG | - | chr4.4:13325286-13325305 | None:intergenic | 35.0% |
| !! | AAGAACACTCCATTTTAGCA+TGG | - | chr4.4:13325518-13325537 | None:intergenic | 35.0% |
| !! | ATTTGATGGTGATCTGTGAA+AGG | - | chr4.4:13324652-13324671 | None:intergenic | 35.0% |
| !! | CCTTCTTTTCAATTCTGAGA+TGG | - | chr4.4:13324866-13324885 | None:intergenic | 35.0% |
| !! | CTTCTTGATGGTGATTTCAT+AGG | - | chr4.4:13324971-13324990 | None:intergenic | 35.0% |
| !!! | CTCTTGTTCATTGCTGATTT+TGG | - | chr4.4:13324508-13324527 | None:intergenic | 35.0% |
| !!! | TTTTGAGACTAATCACCTTC+TGG | - | chr4.4:13324555-13324574 | None:intergenic | 35.0% |
| ATCACCATCAAGAAGCTTCA+AGG | + | chr4.4:13324976-13324995 | MS.gene023604:CDS | 40.0% | |
| ATTCTAATTCCGGCGAGTTT+CGG | + | chr4.4:13325775-13325794 | MS.gene023604:CDS | 40.0% | |
| CAACTCACATCTCAAAGTGA+AGG | + | chr4.4:13324615-13324634 | MS.gene023604:CDS | 40.0% | |
| GAAGAATACTAGGTTCTCTG+AGG | + | chr4.4:13325692-13325711 | MS.gene023604:CDS | 40.0% | |
| GAGTCAGGTTTATCTGTCTT+TGG | + | chr4.4:13325848-13325867 | MS.gene023604:CDS | 40.0% | |
| GTCTTACCAATGTTGAAACC+AGG | - | chr4.4:13325819-13325838 | None:intergenic | 40.0% | |
| TAAGACAGTGATACAGAGTC+AGG | + | chr4.4:13325833-13325852 | MS.gene023604:CDS | 40.0% | |
| TAAGCACCAACAGAAGAACA+AGG | + | chr4.4:13324684-13324703 | MS.gene023604:CDS | 40.0% | |
| TCAGGTTTATCTGTCTTTGG+TGG | + | chr4.4:13325851-13325870 | MS.gene023604:CDS | 40.0% | |
| TGGTGAAAACTGCATTTGGA+TGG | - | chr4.4:13325266-13325285 | None:intergenic | 40.0% | |
| TTCTCCTTGAAGCTTCTTGA+TGG | - | chr4.4:13324983-13325002 | None:intergenic | 40.0% | |
| ! | CTAATAGCAAGGCTTTTTGC+TGG | + | chr4.4:13324733-13324752 | MS.gene023604:CDS | 40.0% |
| ! | TTATGGAGGCTCTAATAGCA+AGG | + | chr4.4:13324722-13324741 | MS.gene023604:CDS | 40.0% |
| !! | GGTTTGGTGAAAACTGCATT+TGG | - | chr4.4:13325270-13325289 | None:intergenic | 40.0% |
| !! | TAGGTTCTCTGAGGTTTACA+TGG | + | chr4.4:13325701-13325720 | MS.gene023604:CDS | 40.0% |
| !! | TTTCTTAGCTTTTGCGGAGA+TGG | + | chr4.4:13325599-13325618 | MS.gene023604:CDS | 40.0% |
| AGGAAGCTAGTGAATTCTGG+AGG | + | chr4.4:13325558-13325577 | MS.gene023604:CDS | 45.0% | |
| CAGAGGAAGCTAGTGAATTC+TGG | + | chr4.4:13325555-13325574 | MS.gene023604:CDS | 45.0% | |
| CGTTTGGACACTGCATTACT+TGG | + | chr4.4:13325629-13325648 | MS.gene023604:CDS | 45.0% | |
| GGAAGCTAGTGAATTCTGGA+GGG | + | chr4.4:13325559-13325578 | MS.gene023604:CDS | 45.0% | |
| TTCTAATTCCGGCGAGTTTC+GGG | + | chr4.4:13325776-13325795 | MS.gene023604:CDS | 45.0% | |
| ! | CAGAATTCACTAGCTTCCTC+TGG | - | chr4.4:13325557-13325576 | None:intergenic | 45.0% |
| ACAAGCAGCTGATCAAGCAG+TGG | + | chr4.4:13324825-13324844 | MS.gene023604:CDS | 50.0% | |
| GTGGTGCCTGGTTTCAACAT+TGG | + | chr4.4:13325810-13325829 | MS.gene023604:CDS | 50.0% | |
| !! | CGAGTTTCGGGTGGTTTTCA+CGG | + | chr4.4:13325788-13325807 | MS.gene023604:CDS | 50.0% |
| AGCAGCTGATCAAGCAGTGG+TGG | + | chr4.4:13324828-13324847 | MS.gene023604:CDS | 55.0% | |
| GAAAACCACCCGAAACTCGC+CGG | - | chr4.4:13325787-13325806 | None:intergenic | 55.0% | |
| TAATTCCGGCGAGTTTCGGG+TGG | + | chr4.4:13325779-13325798 | MS.gene023604:CDS | 55.0% | |
| !! | GTTTCGGGTGGTTTTCACGG+TGG | + | chr4.4:13325791-13325810 | MS.gene023604:CDS | 55.0% |
| CGGAGATGGCAAAGCGCGTT+TGG | + | chr4.4:13325613-13325632 | MS.gene023604:CDS | 60.0% | |
| ! | GTGGTTTTCACGGTGGTGCC+TGG | + | chr4.4:13325798-13325817 | MS.gene023604:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 13324490 | 13325893 | 13324490 | ID=MS.gene023604 |
| chr4.4 | mRNA | 13324490 | 13325893 | 13324490 | ID=MS.gene023604.t1;Parent=MS.gene023604 |
| chr4.4 | exon | 13324490 | 13325893 | 13324490 | ID=MS.gene023604.t1.exon1;Parent=MS.gene023604.t1 |
| chr4.4 | CDS | 13324490 | 13325893 | 13324490 | ID=cds.MS.gene023604.t1;Parent=MS.gene023604.t1 |
| Gene Sequence |
| Protein sequence |
