Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene69866.t1 | XP_013463890.1 | 96.3 | 537 | 20 | 0 | 1 | 537 | 1 | 537 | 0.00E+00 | 1076.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene69866.t1 | Q9FZP1 | 61.3 | 537 | 196 | 7 | 6 | 536 | 5 | 535 | 2.4e-194 | 679.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene69866.t1 | A0A072VIG5 | 96.3 | 537 | 20 | 0 | 1 | 537 | 1 | 537 | 0.0e+00 | 1076.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049501 | MS.gene69866 | 0.801639 | 8.19E-49 | -1.69E-46 |
| MS.gene050586 | MS.gene69866 | 0.807132 | 5.87E-50 | -1.69E-46 |
| MS.gene052020 | MS.gene69866 | 0.801654 | 8.13E-49 | -1.69E-46 |
| MS.gene052665 | MS.gene69866 | 0.806124 | 9.58E-50 | -1.69E-46 |
| MS.gene052732 | MS.gene69866 | 0.825513 | 4.50E-54 | -1.69E-46 |
| MS.gene053144 | MS.gene69866 | 0.812288 | 4.57E-51 | -1.69E-46 |
| MS.gene054550 | MS.gene69866 | 0.800052 | 1.73E-48 | -1.69E-46 |
| MS.gene054584 | MS.gene69866 | 0.810671 | 1.03E-50 | -1.69E-46 |
| MS.gene056553 | MS.gene69866 | 0.807857 | 4.12E-50 | -1.69E-46 |
| MS.gene056584 | MS.gene69866 | 0.810879 | 9.25E-51 | -1.69E-46 |
| MS.gene058906 | MS.gene69866 | 0.801163 | 1.03E-48 | -1.69E-46 |
| MS.gene059154 | MS.gene69866 | 0.805364 | 1.38E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene063475 | MS.gene69866 | PPI |
| MS.gene69866 | MS.gene95198 | PPI |
| MS.gene057928 | MS.gene69866 | PPI |
| MS.gene69866 | MS.gene057926 | PPI |
| MS.gene95196 | MS.gene69866 | PPI |
| MS.gene51808 | MS.gene69866 | PPI |
| MS.gene95198 | MS.gene69866 | PPI |
| MS.gene057926 | MS.gene69866 | PPI |
| MS.gene69310 | MS.gene69866 | PPI |
| MS.gene69866 | MS.gene063475 | PPI |
| MS.gene033078 | MS.gene69866 | PPI |
| MS.gene044430 | MS.gene69866 | PPI |
| MS.gene69866 | MS.gene95196 | PPI |
| MS.gene50879 | MS.gene69866 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene69866.t1 | MTR_2g451510 | 96.276 | 537 | 20 | 0 | 1 | 537 | 1 | 537 | 0.0 | 1068 |
| MS.gene69866.t1 | MTR_4g116070 | 66.034 | 527 | 164 | 4 | 12 | 536 | 15 | 528 | 0.0 | 701 |
| MS.gene69866.t1 | MTR_3g023700 | 47.925 | 530 | 252 | 5 | 13 | 537 | 5 | 515 | 6.10e-174 | 501 |
| MS.gene69866.t1 | MTR_4g109300 | 47.810 | 525 | 252 | 7 | 32 | 536 | 20 | 542 | 1.42e-173 | 501 |
| MS.gene69866.t1 | MTR_3g023710 | 47.655 | 533 | 253 | 6 | 12 | 537 | 4 | 517 | 3.44e-173 | 499 |
| MS.gene69866.t1 | MTR_3g023690 | 47.269 | 531 | 255 | 6 | 12 | 537 | 4 | 514 | 6.25e-170 | 491 |
| MS.gene69866.t1 | MTR_5g043710 | 49.000 | 500 | 229 | 4 | 41 | 536 | 26 | 503 | 4.05e-169 | 488 |
| MS.gene69866.t1 | MTR_4g109300 | 48.893 | 497 | 232 | 7 | 32 | 508 | 20 | 514 | 3.17e-168 | 488 |
| MS.gene69866.t1 | MTR_4g109300 | 44.902 | 559 | 252 | 8 | 32 | 536 | 20 | 576 | 3.66e-166 | 484 |
| MS.gene69866.t1 | MTR_4g116040 | 56.334 | 371 | 131 | 5 | 166 | 536 | 3 | 342 | 1.55e-139 | 407 |
| MS.gene69866.t1 | MTR_4g109300 | 47.236 | 398 | 188 | 7 | 159 | 536 | 2 | 397 | 6.69e-117 | 351 |
| MS.gene69866.t1 | MTR_3g023690 | 47.927 | 386 | 181 | 4 | 157 | 537 | 56 | 426 | 2.99e-115 | 348 |
| MS.gene69866.t1 | MTR_8g091920 | 36.257 | 342 | 118 | 11 | 183 | 508 | 2 | 259 | 2.54e-42 | 153 |
| MS.gene69866.t1 | MTR_8g091915 | 66.038 | 53 | 18 | 0 | 229 | 281 | 9 | 61 | 1.14e-19 | 83.2 |
| MS.gene69866.t1 | MTR_4g116050 | 65.306 | 49 | 17 | 0 | 96 | 144 | 29 | 77 | 1.05e-16 | 75.5 |
| MS.gene69866.t1 | MTR_4g109260 | 38.667 | 75 | 45 | 1 | 238 | 311 | 59 | 133 | 3.45e-11 | 61.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene69866.t1 | AT5G34940 | 60.813 | 541 | 200 | 7 | 3 | 537 | 2 | 536 | 0.0 | 682 |
| MS.gene69866.t1 | AT5G34940 | 62.344 | 401 | 146 | 3 | 142 | 537 | 1 | 401 | 0.0 | 522 |
| MS.gene69866.t1 | AT5G61250 | 47.399 | 519 | 261 | 3 | 30 | 536 | 20 | 538 | 2.13e-180 | 518 |
| MS.gene69866.t1 | AT5G61250 | 47.399 | 519 | 261 | 3 | 30 | 536 | 20 | 538 | 2.13e-180 | 518 |
| MS.gene69866.t1 | AT5G61250 | 47.399 | 519 | 261 | 3 | 30 | 536 | 20 | 538 | 2.13e-180 | 518 |
| MS.gene69866.t1 | AT5G07830 | 47.180 | 532 | 268 | 6 | 18 | 536 | 11 | 542 | 1.17e-175 | 506 |
| MS.gene69866.t1 | AT5G34940 | 61.399 | 386 | 141 | 5 | 3 | 386 | 2 | 381 | 1.33e-175 | 500 |
| MS.gene69866.t1 | AT5G34940 | 61.921 | 302 | 103 | 2 | 244 | 537 | 2 | 299 | 6.75e-135 | 393 |
Find 123 sgRNAs with CRISPR-Local
Find 260 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTTGATGCAACGTGGTTTA+AGG | 0.142167 | 2.2:+36656461 | MS.gene69866:CDS |
| TTTGGATTGAATGCCCTTTA+TGG | 0.158147 | 2.2:+36656071 | MS.gene69866:CDS |
| ATGCATTTGTGTATAGTTTC+TGG | 0.217121 | 2.2:+36656967 | MS.gene69866:CDS |
| TTGTATCATTAACAGGTATT+TGG | 0.223146 | 2.2:+36657223 | MS.gene69866:intron |
| GAGAAAGGAGCAATCCTTAT+TGG | 0.269954 | 2.2:-36658500 | None:intergenic |
| TTAAGAAAATCTTGTTGTTC+AGG | 0.281722 | 2.2:-36655574 | None:intergenic |
| TTGCAAGATGAACTGGTATA+TGG | 0.282033 | 2.2:+36655766 | MS.gene69866:CDS |
| ATATTTGCAGTGCTCTTCTT+TGG | 0.283909 | 2.2:+36658021 | MS.gene69866:intron |
| TACCTATAGTAGTCTGGATT+TGG | 0.289717 | 2.2:-36657344 | None:intergenic |
| GTCTGGATTTGGAAGGAAAT+TGG | 0.313849 | 2.2:-36657333 | None:intergenic |
| CCTCCTCAGAAATGTGATTA+TGG | 0.333661 | 2.2:+36654820 | MS.gene69866:CDS |
| TCTTGCTTCTCTTCTCAATC+TGG | 0.339803 | 2.2:+36654858 | MS.gene69866:CDS |
| TATTGCAGACAGAGTTTGAT+AGG | 0.355616 | 2.2:+36657284 | MS.gene69866:CDS |
| AGAAACACGTCTGCAATGTT+TGG | 0.381259 | 2.2:+36655826 | MS.gene69866:CDS |
| CGACGGTTGTGTTGTTGTCC+AGG | 0.381277 | 2.2:-36658244 | None:intergenic |
| GTAAGGCATCTTTCTATGTA+AGG | 0.381689 | 2.2:-36658294 | None:intergenic |
| TAAGCTCATCAAAGCCAATA+AGG | 0.386395 | 2.2:+36658486 | MS.gene69866:CDS |
| TATACCTGATGCTGTTGTTC+CGG | 0.386694 | 2.2:+36658538 | MS.gene69866:CDS |
| ACAGCATGGGTTGGTGAGTC+AGG | 0.398551 | 2.2:+36656909 | MS.gene69866:CDS |
| TTTGATGAGCTTACATATAG+AGG | 0.399936 | 2.2:-36658476 | None:intergenic |
| AAAGGGAATGTTATGATTGA+TGG | 0.402253 | 2.2:+36654739 | MS.gene69866:CDS |
| CCTCCAGGCGCAATGACTAA+TGG | 0.413718 | 2.2:-36656435 | None:intergenic |
| TCTTCTTTGGCACCGACTCA+TGG | 0.418252 | 2.2:+36658034 | MS.gene69866:CDS |
| TTCCACCCTGTGGAGTTAGA+TGG | 0.421853 | 2.2:-36658376 | None:intergenic |
| GAAATTCATGGATGGGAACT+TGG | 0.427992 | 2.2:+36656182 | MS.gene69866:CDS |
| AGTTCGTCCCATCTTGGCAT+TGG | 0.430937 | 2.2:-36655868 | None:intergenic |
| AGTTTGATAGGAGGAAACTA+TGG | 0.431640 | 2.2:+36657296 | MS.gene69866:CDS |
| GTTCGTCCCATCTTGGCATT+GGG | 0.433994 | 2.2:-36655867 | None:intergenic |
| TCACCATTGAAACTGAGATT+AGG | 0.436550 | 2.2:+36655736 | MS.gene69866:CDS |
| ACAACCGTCGAAGCGACATT+TGG | 0.448324 | 2.2:+36658257 | MS.gene69866:CDS |
| ATTTAATACCTATAGTAGTC+TGG | 0.451269 | 2.2:-36657350 | None:intergenic |
| GTACTATCAACTACCTTCTC+AGG | 0.451571 | 2.2:+36658065 | MS.gene69866:CDS |
| ACACACCACATTTATAGCCT+TGG | 0.452398 | 2.2:+36656522 | MS.gene69866:CDS |
| GTGATTATGGTACATGTAGT+TGG | 0.454586 | 2.2:+36654833 | MS.gene69866:CDS |
| TTCCAAATCCAGACTACTAT+AGG | 0.457974 | 2.2:+36657342 | MS.gene69866:CDS |
| TCTCAGTTTCAATGGTGAAA+AGG | 0.460420 | 2.2:-36655731 | None:intergenic |
| TTTGTGCAACTTTGGATTGG+TGG | 0.462446 | 2.2:+36654797 | MS.gene69866:CDS |
| TGGCAGTTTGCAAGATGAAC+TGG | 0.463605 | 2.2:+36655759 | MS.gene69866:CDS |
| TGATTGAGTTCGTCCCATCT+TGG | 0.466672 | 2.2:-36655874 | None:intergenic |
| ATTGATGGTAGTTCTGTGAT+TGG | 0.468602 | 2.2:+36654754 | MS.gene69866:CDS |
| ATGTACCGACTTTCCATAAA+GGG | 0.470291 | 2.2:-36656084 | None:intergenic |
| TGCAAGATGAACTGGTATAT+GGG | 0.470523 | 2.2:+36655767 | MS.gene69866:CDS |
| TCGTTTATTCAATACACTGT+TGG | 0.471428 | 2.2:+36656149 | MS.gene69866:CDS |
| TTATTTGTGCAACTTTGGAT+TGG | 0.472089 | 2.2:+36654794 | MS.gene69866:CDS |
| GTCCAGGTTGATCAATAGTA+TGG | 0.473426 | 2.2:-36658228 | None:intergenic |
| TGATTATGGTACATGTAGTT+GGG | 0.480870 | 2.2:+36654834 | MS.gene69866:CDS |
| CAAGCCGGAACAACAGCATC+AGG | 0.484868 | 2.2:-36658542 | None:intergenic |
| ATCTAATAAATCTGTGGATG+TGG | 0.485447 | 2.2:+36656497 | MS.gene69866:CDS |
| CCACCTAATCTCAGTTTCAA+TGG | 0.488877 | 2.2:-36655739 | None:intergenic |
| TTGAATAAACGATTCGGCAT+TGG | 0.492524 | 2.2:-36656138 | None:intergenic |
| GGAAAGAACTATGAAATTCA+TGG | 0.493133 | 2.2:+36656170 | MS.gene69866:CDS |
| GCAGACGTGTTTCTAACAAA+AGG | 0.497989 | 2.2:-36655817 | None:intergenic |
| AGCCAAGTCATGTTACTGAA+TGG | 0.504434 | 2.2:+36658407 | MS.gene69866:CDS |
| CTTCTTTGGCACCGACTCAT+GGG | 0.507966 | 2.2:+36658035 | MS.gene69866:CDS |
| CATGGGTTGGTGAGTCAGGA+GGG | 0.509443 | 2.2:+36656913 | MS.gene69866:CDS |
| AGTGTATTGAATAAACGATT+CGG | 0.509792 | 2.2:-36656144 | None:intergenic |
| CTTACATATAGAGGCTTCAA+AGG | 0.510130 | 2.2:-36658467 | None:intergenic |
| TATGTACCGACTTTCCATAA+AGG | 0.513953 | 2.2:-36656085 | None:intergenic |
| ATGATGAAGATGTGAAGAAA+GGG | 0.515453 | 2.2:+36654722 | MS.gene69866:CDS |
| GGTGCCTCCCAATGCCAAGA+TGG | 0.519720 | 2.2:+36655860 | MS.gene69866:CDS |
| AGAGACAAAACTACATTCAA+AGG | 0.521273 | 2.2:+36656849 | MS.gene69866:CDS |
| CACCATACTATTGATCAACC+TGG | 0.524123 | 2.2:+36658226 | MS.gene69866:CDS |
| TTCCATTCAGTAACATGACT+TGG | 0.524741 | 2.2:-36658409 | None:intergenic |
| TGAGAAAATACAATGGAGAA+AGG | 0.526211 | 2.2:-36658515 | None:intergenic |
| TATCTTGTTTGTTCCTGAGA+AGG | 0.526469 | 2.2:-36658078 | None:intergenic |
| GTGCCTCCCAATGCCAAGAT+GGG | 0.526853 | 2.2:+36655861 | MS.gene69866:CDS |
| AGAACTATGAAATTCATGGA+TGG | 0.527137 | 2.2:+36656174 | MS.gene69866:CDS |
| AAGCCATTAGTCATTGCGCC+TGG | 0.532443 | 2.2:+36656432 | MS.gene69866:CDS |
| TATGATGAAGATGTGAAGAA+AGG | 0.541363 | 2.2:+36654721 | MS.gene69866:CDS |
| GAACTATGAAATTCATGGAT+GGG | 0.542759 | 2.2:+36656175 | MS.gene69866:CDS |
| TGTGTATACACTATTTAGCA+TGG | 0.545669 | 2.2:+36654656 | MS.gene69866:CDS |
| GTTGCATCAAAGAAACCTCC+AGG | 0.545777 | 2.2:-36656450 | None:intergenic |
| CGTCCCATCTTGGCATTGGG+AGG | 0.551138 | 2.2:-36655864 | None:intergenic |
| GGCGCAATGACTAATGGCTT+AGG | 0.552752 | 2.2:-36656429 | None:intergenic |
| TGGCACCGACTCATGGGAAG+CGG | 0.557248 | 2.2:+36658041 | MS.gene69866:CDS |
| TGGCAGGCAATGAATTGAGT+GGG | 0.557347 | 2.2:+36656313 | MS.gene69866:intron |
| TTGTCTCTATCAAGATAGGA+AGG | 0.557907 | 2.2:-36656834 | None:intergenic |
| CAACATTGCTAGCCGCAAGC+CGG | 0.559036 | 2.2:-36658557 | None:intergenic |
| ATCGCCAAATGTCGCTTCGA+CGG | 0.560109 | 2.2:-36658261 | None:intergenic |
| TCGGCATTGGTGTAGTTCCA+AGG | 0.562201 | 2.2:-36656125 | None:intergenic |
| AGAGTACCATCTAACTCCAC+AGG | 0.562210 | 2.2:+36658370 | MS.gene69866:CDS |
| CACATTTATAGCCTTGGACC+AGG | 0.565926 | 2.2:+36656528 | MS.gene69866:CDS |
| GCATGGGTTGGTGAGTCAGG+AGG | 0.569855 | 2.2:+36656912 | MS.gene69866:CDS |
| TATGGAAAGTCGGTACATAG+TGG | 0.573643 | 2.2:+36656089 | MS.gene69866:CDS |
| ATGGGTTGGTGAGTCAGGAG+GGG | 0.574317 | 2.2:+36656914 | MS.gene69866:CDS |
| GCAATGTTTGGATTCTCACA+AGG | 0.576556 | 2.2:+36655838 | MS.gene69866:CDS |
| ACCAACCCATGCTGTTGCTG+AGG | 0.580019 | 2.2:-36656901 | None:intergenic |
| CAGGAACCTCAGCAACAGCA+TGG | 0.580368 | 2.2:+36656895 | MS.gene69866:CDS |
| ACCTCAGCAACAGCATGGGT+TGG | 0.582674 | 2.2:+36656900 | MS.gene69866:CDS |
| CCATTGAAACTGAGATTAGG+TGG | 0.583219 | 2.2:+36655739 | MS.gene69866:CDS |
| GTGGTTATACAGAAGGACCT+TGG | 0.583300 | 2.2:+36656108 | MS.gene69866:CDS |
| CTATGTATATTTCCACCCTG+TGG | 0.586599 | 2.2:-36658386 | None:intergenic |
| ATGCATCGGATACAAGATGA+TGG | 0.592109 | 2.2:-36656950 | None:intergenic |
| TTTCTAACAAAAGGAGTGCA+CGG | 0.594964 | 2.2:-36655808 | None:intergenic |
| GGCGAAAAGTACCTGGTCCA+AGG | 0.595921 | 2.2:-36656539 | None:intergenic |
| GATGCTGTTGTTCCGGCTTG+CGG | 0.598210 | 2.2:+36658545 | MS.gene69866:CDS |
| GAATGCCCTTTATGGAAAGT+CGG | 0.602404 | 2.2:+36656079 | MS.gene69866:CDS |
| GTACATAGTGGTTATACAGA+AGG | 0.609586 | 2.2:+36656101 | MS.gene69866:CDS |
| TGGATTTGGAAGGAAATTGG+TGG | 0.609819 | 2.2:-36657330 | None:intergenic |
| TATAGTAGTCTGGATTTGGA+AGG | 0.610207 | 2.2:-36657340 | None:intergenic |
| AAGCAAATCTAATAAATCTG+TGG | 0.613723 | 2.2:+36656491 | MS.gene69866:CDS |
| CTGGCAGGCAATGAATTGAG+TGG | 0.614470 | 2.2:+36656312 | MS.gene69866:intron |
| GAAACTATACACAAATGCAT+CGG | 0.619169 | 2.2:-36656964 | None:intergenic |
| TGCAGACAGAGTTTGATAGG+AGG | 0.621831 | 2.2:+36657287 | MS.gene69866:CDS |
| AACAGGTATTTGGATCAACT+CGG | 0.623593 | 2.2:+36657233 | MS.gene69866:intron |
| AGGAGTTGATACGCACCTTG+TGG | 0.627565 | 2.2:+36656797 | MS.gene69866:intron |
| CCATTAGTCATTGCGCCTGG+AGG | 0.629727 | 2.2:+36656435 | MS.gene69866:CDS |
| AGGAACCTCAGCAACAGCAT+GGG | 0.631168 | 2.2:+36656896 | MS.gene69866:CDS |
| CTGGTCCAAGGCTATAAATG+TGG | 0.631236 | 2.2:-36656527 | None:intergenic |
| CCATAATCACATTTCTGAGG+AGG | 0.634288 | 2.2:-36654820 | None:intergenic |
| AACACAGTGAGTGATGAAAG+TGG | 0.639208 | 2.2:+36654697 | MS.gene69866:CDS |
| ACATATAGAGGCTTCAAAGG+AGG | 0.639329 | 2.2:-36658464 | None:intergenic |
| CAATGTTTGGATTCTCACAA+GGG | 0.640318 | 2.2:+36655839 | MS.gene69866:CDS |
| GGCAGGCAATGAATTGAGTG+GGG | 0.653685 | 2.2:+36656314 | MS.gene69866:intron |
| GTACACCGCTTCCCATGAGT+CGG | 0.659571 | 2.2:-36658046 | None:intergenic |
| GATTATGGTACATGTAGTTG+GGG | 0.660234 | 2.2:+36654835 | MS.gene69866:CDS |
| GAGGTTTCTTTGATGCAACG+TGG | 0.664358 | 2.2:+36656454 | MS.gene69866:CDS |
| GTACCATAATCACATTTCTG+AGG | 0.667698 | 2.2:-36654823 | None:intergenic |
| TCAGGAGGGGCTTATAACAG+TGG | 0.681174 | 2.2:+36656927 | MS.gene69866:CDS |
| AGGTATATGAGAAAATACAA+TGG | 0.684429 | 2.2:-36658522 | None:intergenic |
| TACCATCTAACTCCACAGGG+TGG | 0.701843 | 2.2:+36658374 | MS.gene69866:CDS |
| GAGTACCATCTAACTCCACA+GGG | 0.705711 | 2.2:+36658371 | MS.gene69866:CDS |
| GCAGGCAATGAATTGAGTGG+GGG | 0.733139 | 2.2:+36656315 | MS.gene69866:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATAAAAAAGATAAAGAAAA+AGG | - | chr2.2:36654897-36654916 | None:intergenic | 10.0% |
| !! | ATTGTTTATTGTGATAAAAA+TGG | + | chr2.2:36655634-36655653 | MS.gene69866:intron | 15.0% |
| !!! | TTCATTATTTTTGAATTGTA+AGG | - | chr2.2:36658314-36658333 | None:intergenic | 15.0% |
| !! | AAAGATAAAGAAAAAGGAAA+AGG | - | chr2.2:36654891-36654910 | None:intergenic | 20.0% |
| !! | ATTGTTAAACTGTTTATGTT+AGG | + | chr2.2:36656036-36656055 | MS.gene69866:intron | 20.0% |
| !! | TTGTTAAACTGTTTATGTTA+GGG | + | chr2.2:36656037-36656056 | MS.gene69866:intron | 20.0% |
| !!! | ACAAACCTTATAACTATTTT+TGG | + | chr2.2:36657188-36657207 | MS.gene69866:intron | 20.0% |
| !!! | AGAAATAATTGATGATTTGA+AGG | - | chr2.2:36656753-36656772 | None:intergenic | 20.0% |
| ! | AAGCAAATCTAATAAATCTG+TGG | + | chr2.2:36656491-36656510 | MS.gene69866:CDS | 25.0% |
| ! | AATAAAATTCTTCTTGCCTA+AGG | + | chr2.2:36656257-36656276 | MS.gene69866:intron | 25.0% |
| ! | AGGTATATGAGAAAATACAA+TGG | - | chr2.2:36658525-36658544 | None:intergenic | 25.0% |
| ! | AGTGTATTGAATAAACGATT+CGG | - | chr2.2:36656147-36656166 | None:intergenic | 25.0% |
| ! | ATCACAATAAACAATAGAGA+TGG | - | chr2.2:36655629-36655648 | None:intergenic | 25.0% |
| ! | ATCAGCCAAAAATAGTTATA+AGG | - | chr2.2:36657196-36657215 | None:intergenic | 25.0% |
| ! | ATCATTCACTTGATATTCAT+AGG | - | chr2.2:36658154-36658173 | None:intergenic | 25.0% |
| ! | ATGTTACCATGAAAATACTA+TGG | - | chr2.2:36657976-36657995 | None:intergenic | 25.0% |
| ! | ATTTAATACCTATAGTAGTC+TGG | - | chr2.2:36657353-36657372 | None:intergenic | 25.0% |
| ! | CTTAATATATGTGTCATGTT+TGG | + | chr2.2:36657885-36657904 | MS.gene69866:intron | 25.0% |
| ! | TATTTGTCTTGAAATCTTCA+AGG | + | chr2.2:36654923-36654942 | MS.gene69866:intron | 25.0% |
| ! | TCATTCACTTGATATTCATA+GGG | - | chr2.2:36658153-36658172 | None:intergenic | 25.0% |
| ! | TTGTATCATTAACAGGTATT+TGG | + | chr2.2:36657223-36657242 | MS.gene69866:intron | 25.0% |
| !! | AAAAATGTTCTTGAAAGTAC+AGG | + | chr2.2:36656876-36656895 | MS.gene69866:CDS | 25.0% |
| !! | ATAATAATCCTGTTTTCTGT+AGG | + | chr2.2:36655432-36655451 | MS.gene69866:intron | 25.0% |
| !! | ATTTTCTTAAATGCAGTGAA+AGG | + | chr2.2:36655587-36655606 | MS.gene69866:CDS | 25.0% |
| !! | TAATAATCCTGTTTTCTGTA+GGG | + | chr2.2:36655433-36655452 | MS.gene69866:intron | 25.0% |
| !! | TACTTTCAAGAACATTTTTC+AGG | - | chr2.2:36656875-36656894 | None:intergenic | 25.0% |
| !! | TTTTCATGGTAACATTTTTG+TGG | + | chr2.2:36657981-36658000 | MS.gene69866:intron | 25.0% |
| !!! | ATCTTGTTTTCTACAAACAA+TGG | - | chr2.2:36655346-36655365 | None:intergenic | 25.0% |
| !!! | CAAAACATTGTTGCTTTTTA+TGG | - | chr2.2:36655295-36655314 | None:intergenic | 25.0% |
| !!! | TCTTGTTTTCTACAAACAAT+GGG | - | chr2.2:36655345-36655364 | None:intergenic | 25.0% |
| !!! | TGATTTTATTTGTGCAACTT+TGG | + | chr2.2:36654789-36654808 | MS.gene69866:CDS | 25.0% |
| !!! | TTAAGAAAATCTTGTTGTTC+AGG | - | chr2.2:36655577-36655596 | None:intergenic | 25.0% |
| !!! | TTTTCAATTGAACTTTGAAG+AGG | - | chr2.2:36658341-36658360 | None:intergenic | 25.0% |
| !!! | TTTTTATTTGCAGATTAGCT+TGG | - | chr2.2:36655269-36655288 | None:intergenic | 25.0% |
| AAAGGGAATGTTATGATTGA+TGG | + | chr2.2:36654739-36654758 | MS.gene69866:CDS | 30.0% | |
| AATCATTTCTTCCAAAAAGC+AGG | + | chr2.2:36655892-36655911 | MS.gene69866:CDS | 30.0% | |
| AGAACTATGAAATTCATGGA+TGG | + | chr2.2:36656174-36656193 | MS.gene69866:CDS | 30.0% | |
| AGAGACAAAACTACATTCAA+AGG | + | chr2.2:36656849-36656868 | MS.gene69866:CDS | 30.0% | |
| ATATGCTTGATCTTACAGAA+AGG | + | chr2.2:36658200-36658219 | MS.gene69866:intron | 30.0% | |
| ATCATTTCTTCCAAAAAGCA+GGG | + | chr2.2:36655893-36655912 | MS.gene69866:CDS | 30.0% | |
| ATCTAATAAATCTGTGGATG+TGG | + | chr2.2:36656497-36656516 | MS.gene69866:CDS | 30.0% | |
| ATGATGAAGATGTGAAGAAA+GGG | + | chr2.2:36654722-36654741 | MS.gene69866:CDS | 30.0% | |
| ATGATGAGAATCAAAGCTAA+GGG | - | chr2.2:36657642-36657661 | None:intergenic | 30.0% | |
| ATGCATTTGTGTATAGTTTC+TGG | + | chr2.2:36656967-36656986 | MS.gene69866:CDS | 30.0% | |
| CAGTGTTAAACTACTTTACA+CGG | - | chr2.2:36656637-36656656 | None:intergenic | 30.0% | |
| CCTTGATTTAGACACATTTA+GGG | + | chr2.2:36657011-36657030 | MS.gene69866:intron | 30.0% | |
| CTTGATTTAGACACATTTAG+GGG | + | chr2.2:36657012-36657031 | MS.gene69866:intron | 30.0% | |
| CTTTGATTCTCATCATATCA+CGG | + | chr2.2:36657646-36657665 | MS.gene69866:intron | 30.0% | |
| GAAACTATACACAAATGCAT+CGG | - | chr2.2:36656967-36656986 | None:intergenic | 30.0% | |
| GAACTATGAAATTCATGGAT+GGG | + | chr2.2:36656175-36656194 | MS.gene69866:CDS | 30.0% | |
| GATGTCATTGTATCATTAAC+AGG | + | chr2.2:36657216-36657235 | MS.gene69866:intron | 30.0% | |
| GGAAAATTCCCTATTTCAAA+TGG | + | chr2.2:36657944-36657963 | MS.gene69866:intron | 30.0% | |
| GGAAAGAACTATGAAATTCA+TGG | + | chr2.2:36656170-36656189 | MS.gene69866:CDS | 30.0% | |
| GTAATGAATATCAGCCAATT+CGG | - | chr2.2:36656563-36656582 | None:intergenic | 30.0% | |
| TACCATGAAAATACTATGGA+TGG | - | chr2.2:36657972-36657991 | None:intergenic | 30.0% | |
| TATGATGAAGATGTGAAGAA+AGG | + | chr2.2:36654721-36654740 | MS.gene69866:CDS | 30.0% | |
| TATGATGAGAATCAAAGCTA+AGG | - | chr2.2:36657643-36657662 | None:intergenic | 30.0% | |
| TCCTTGATTTAGACACATTT+AGG | + | chr2.2:36657010-36657029 | MS.gene69866:intron | 30.0% | |
| TCGTTTATTCAATACACTGT+TGG | + | chr2.2:36656149-36656168 | MS.gene69866:CDS | 30.0% | |
| TGAGAAAATACAATGGAGAA+AGG | - | chr2.2:36658518-36658537 | None:intergenic | 30.0% | |
| TGATTATGGTACATGTAGTT+GGG | + | chr2.2:36654834-36654853 | MS.gene69866:CDS | 30.0% | |
| TGTGTATACACTATTTAGCA+TGG | + | chr2.2:36654656-36654675 | MS.gene69866:CDS | 30.0% | |
| TTATTTGTGCAACTTTGGAT+TGG | + | chr2.2:36654794-36654813 | MS.gene69866:CDS | 30.0% | |
| TTCAGTGTAATTACAAGTGT+CGG | + | chr2.2:36655056-36655075 | MS.gene69866:intron | 30.0% | |
| TTTCAGATCATTAGTTGTGT+CGG | - | chr2.2:36655025-36655044 | None:intergenic | 30.0% | |
| TTTGATGAGCTTACATATAG+AGG | - | chr2.2:36658479-36658498 | None:intergenic | 30.0% | |
| ! | ATCCATCCATAGTATTTTCA+TGG | + | chr2.2:36657967-36657986 | MS.gene69866:intron | 30.0% |
| ! | GTTAGGGCTAAGATTATTTT+TGG | + | chr2.2:36656053-36656072 | MS.gene69866:intron | 30.0% |
| ! | TCAATGTGTTAGTCCATTTT+GGG | + | chr2.2:36657537-36657556 | MS.gene69866:intron | 30.0% |
| ! | TTCAATGTGTTAGTCCATTT+TGG | + | chr2.2:36657536-36657555 | MS.gene69866:intron | 30.0% |
| ! | TTGAAATAGGGAATTTTCCA+AGG | - | chr2.2:36657943-36657962 | None:intergenic | 30.0% |
| !! | ACTTAATTTGTCTTCTACAC+AGG | + | chr2.2:36656777-36656796 | MS.gene69866:intron | 30.0% |
| !! | AGTTTTGTCTCTATCAAGAT+AGG | - | chr2.2:36656841-36656860 | None:intergenic | 30.0% |
| !! | ATTATCATCAGTGTTGTTTC+TGG | + | chr2.2:36657149-36657168 | MS.gene69866:intron | 30.0% |
| !! | CTAAATTTTACCCTGCTTTT+TGG | - | chr2.2:36655906-36655925 | None:intergenic | 30.0% |
| !! | GTTTTAAGTGTAAACTCAGA+TGG | + | chr2.2:36658434-36658453 | MS.gene69866:CDS | 30.0% |
| !! | TGTTTTCGAAATGTTGTTTG+AGG | + | chr2.2:36655222-36655241 | MS.gene69866:intron | 30.0% |
| !!! | AAGTTCTTTATTTTGCCACA+TGG | - | chr2.2:36656685-36656704 | None:intergenic | 30.0% |
| !!! | GATTCAGAATTTTTTCCACA+AGG | - | chr2.2:36656815-36656834 | None:intergenic | 30.0% |
| AACAACGAGAAACATGGTTA+TGG | + | chr2.2:36657480-36657499 | MS.gene69866:intron | 35.0% | |
| AACAGGTATTTGGATCAACT+CGG | + | chr2.2:36657233-36657252 | MS.gene69866:intron | 35.0% | |
| ACATACAACTTTGTCTACCT+TGG | + | chr2.2:36657923-36657942 | MS.gene69866:intron | 35.0% | |
| AGTTTGATAGGAGGAAACTA+TGG | + | chr2.2:36657296-36657315 | MS.gene69866:CDS | 35.0% | |
| ATATTTGCAGTGCTCTTCTT+TGG | + | chr2.2:36658021-36658040 | MS.gene69866:intron | 35.0% | |
| ATGTTTCTCGTTGTTTAGCA+AGG | - | chr2.2:36657475-36657494 | None:intergenic | 35.0% | |
| CAATAAACCCTACAGAAAAC+AGG | - | chr2.2:36655443-36655462 | None:intergenic | 35.0% | |
| CAATGTTTGGATTCTCACAA+GGG | + | chr2.2:36655839-36655858 | MS.gene69866:CDS | 35.0% | |
| CCCTAAATGTGTCTAAATCA+AGG | - | chr2.2:36657014-36657033 | None:intergenic | 35.0% | |
| CTTACATATAGAGGCTTCAA+AGG | - | chr2.2:36658470-36658489 | None:intergenic | 35.0% | |
| GAATTGTAAGCTATGAAGCA+CGG | - | chr2.2:36655167-36655186 | None:intergenic | 35.0% | |
| GATTATGGTACATGTAGTTG+GGG | + | chr2.2:36654835-36654854 | MS.gene69866:CDS | 35.0% | |
| GGACTAACACATTGAAAAAG+TGG | - | chr2.2:36657532-36657551 | None:intergenic | 35.0% | |
| GTACATAGTGGTTATACAGA+AGG | + | chr2.2:36656101-36656120 | MS.gene69866:CDS | 35.0% | |
| GTACCATAATCACATTTCTG+AGG | - | chr2.2:36654826-36654845 | None:intergenic | 35.0% | |
| GTGATTATGGTACATGTAGT+TGG | + | chr2.2:36654833-36654852 | MS.gene69866:CDS | 35.0% | |
| TAAGCTCATCAAAGCCAATA+AGG | + | chr2.2:36658486-36658505 | MS.gene69866:CDS | 35.0% | |
| TACCTATAGTAGTCTGGATT+TGG | - | chr2.2:36657347-36657366 | None:intergenic | 35.0% | |
| TATAGTAGTCTGGATTTGGA+AGG | - | chr2.2:36657343-36657362 | None:intergenic | 35.0% | |
| TATTGCAGACAGAGTTTGAT+AGG | + | chr2.2:36657284-36657303 | MS.gene69866:CDS | 35.0% | |
| TCACCATTGAAACTGAGATT+AGG | + | chr2.2:36655736-36655755 | MS.gene69866:CDS | 35.0% | |
| TCTCAGTTTCAATGGTGAAA+AGG | - | chr2.2:36655734-36655753 | None:intergenic | 35.0% | |
| TCTGTTCTGTCATTGTTATG+TGG | - | chr2.2:36655382-36655401 | None:intergenic | 35.0% | |
| TGCAAGATGAACTGGTATAT+GGG | + | chr2.2:36655767-36655786 | MS.gene69866:CDS | 35.0% | |
| TGTGTCTAAATCAAGGATCA+AGG | - | chr2.2:36657007-36657026 | None:intergenic | 35.0% | |
| TTCCAAATCCAGACTACTAT+AGG | + | chr2.2:36657342-36657361 | MS.gene69866:CDS | 35.0% | |
| TTCCATTCAGTAACATGACT+TGG | - | chr2.2:36658412-36658431 | None:intergenic | 35.0% | |
| TTGAGGTTTGAATGCATGTT+GGG | + | chr2.2:36655239-36655258 | MS.gene69866:intron | 35.0% | |
| TTGCAAGATGAACTGGTATA+TGG | + | chr2.2:36655766-36655785 | MS.gene69866:CDS | 35.0% | |
| TTGCTAAACAACGAGAAACA+TGG | + | chr2.2:36657474-36657493 | MS.gene69866:intron | 35.0% | |
| TTGTCTCTATCAAGATAGGA+AGG | - | chr2.2:36656837-36656856 | None:intergenic | 35.0% | |
| TTTGGATTGAATGCCCTTTA+TGG | + | chr2.2:36656071-36656090 | MS.gene69866:CDS | 35.0% | |
| ! | ATTGATGGTAGTTCTGTGAT+TGG | + | chr2.2:36654754-36654773 | MS.gene69866:CDS | 35.0% |
| ! | CAATGTAGAGTATTCGAGTT+CGG | + | chr2.2:36657804-36657823 | MS.gene69866:intron | 35.0% |
| ! | GCATATTAGTTTCGATCTCA+AGG | - | chr2.2:36658186-36658205 | None:intergenic | 35.0% |
| ! | GGATGGATCCATTTGAAATA+GGG | - | chr2.2:36657955-36657974 | None:intergenic | 35.0% |
| ! | GTAAGGCATCTTTCTATGTA+AGG | - | chr2.2:36658297-36658316 | None:intergenic | 35.0% |
| ! | TATCTTGTTTGTTCCTGAGA+AGG | - | chr2.2:36658081-36658100 | None:intergenic | 35.0% |
| ! | TGGATGGATCCATTTGAAAT+AGG | - | chr2.2:36657956-36657975 | None:intergenic | 35.0% |
| ! | TGTGAGTGTTTTGTGACTAA+TGG | + | chr2.2:36655970-36655989 | MS.gene69866:intron | 35.0% |
| ! | TTAGTCCTCTATTTTCCATG+TGG | + | chr2.2:36656667-36656686 | MS.gene69866:intron | 35.0% |
| ! | TTGAATAAACGATTCGGCAT+TGG | - | chr2.2:36656141-36656160 | None:intergenic | 35.0% |
| ! | TTTCTAACAAAAGGAGTGCA+CGG | - | chr2.2:36655811-36655830 | None:intergenic | 35.0% |
| ! | TTTGAGGTTTGAATGCATGT+TGG | + | chr2.2:36655238-36655257 | MS.gene69866:intron | 35.0% |
| ! | TTTTGCCACATGGAAAATAG+AGG | - | chr2.2:36656675-36656694 | None:intergenic | 35.0% |
| !! | ATGTACCGACTTTCCATAAA+GGG | - | chr2.2:36656087-36656106 | None:intergenic | 35.0% |
| !! | TATGTACCGACTTTCCATAA+AGG | - | chr2.2:36656088-36656107 | None:intergenic | 35.0% |
| !! | TGAGTTCTAGAATGTTTGCT+TGG | + | chr2.2:36654946-36654965 | MS.gene69866:intron | 35.0% |
| !!! | CATTTTTTTTCATCTCGTGC+AGG | + | chr2.2:36655550-36655569 | MS.gene69866:intron | 35.0% |
| AACACAGTGAGTGATGAAAG+TGG | + | chr2.2:36654697-36654716 | MS.gene69866:CDS | 40.0% | |
| ACACACCACATTTATAGCCT+TGG | + | chr2.2:36656522-36656541 | MS.gene69866:CDS | 40.0% | |
| ACATATAGAGGCTTCAAAGG+AGG | - | chr2.2:36658467-36658486 | None:intergenic | 40.0% | |
| ACTCAATGTACTCAAGCCTT+AGG | - | chr2.2:36656276-36656295 | None:intergenic | 40.0% | |
| AGAAACACGTCTGCAATGTT+TGG | + | chr2.2:36655826-36655845 | MS.gene69866:CDS | 40.0% | |
| AGACATTTGATTCCCACAGA+CGG | + | chr2.2:36657730-36657749 | MS.gene69866:intron | 40.0% | |
| AGCCAAGTCATGTTACTGAA+TGG | + | chr2.2:36658407-36658426 | MS.gene69866:CDS | 40.0% | |
| AGCTTACACAAGACCCAAAA+TGG | - | chr2.2:36657553-36657572 | None:intergenic | 40.0% | |
| ATGCATCGGATACAAGATGA+TGG | - | chr2.2:36656953-36656972 | None:intergenic | 40.0% | |
| ATTCACACATGCTAGCTGAA+AGG | - | chr2.2:36657709-36657728 | None:intergenic | 40.0% | |
| CACCATACTATTGATCAACC+TGG | + | chr2.2:36658226-36658245 | MS.gene69866:CDS | 40.0% | |
| CATTCTACGAAGCACAGATA+CGG | + | chr2.2:36654977-36654996 | MS.gene69866:intron | 40.0% | |
| CCACCTAATCTCAGTTTCAA+TGG | - | chr2.2:36655742-36655761 | None:intergenic | 40.0% | |
| CCATTGAAACTGAGATTAGG+TGG | + | chr2.2:36655739-36655758 | MS.gene69866:CDS | 40.0% | |
| CCTCCTCAGAAATGTGATTA+TGG | + | chr2.2:36654820-36654839 | MS.gene69866:CDS | 40.0% | |
| CTATGTATATTTCCACCCTG+TGG | - | chr2.2:36658389-36658408 | None:intergenic | 40.0% | |
| CTTTGATGCAACGTGGTTTA+AGG | + | chr2.2:36656461-36656480 | MS.gene69866:CDS | 40.0% | |
| GAAATTCATGGATGGGAACT+TGG | + | chr2.2:36656182-36656201 | MS.gene69866:CDS | 40.0% | |
| GAATGCCCTTTATGGAAAGT+CGG | + | chr2.2:36656079-36656098 | MS.gene69866:CDS | 40.0% | |
| GAGAAAGGAGCAATCCTTAT+TGG | - | chr2.2:36658503-36658522 | None:intergenic | 40.0% | |
| GCAATGTTTGGATTCTCACA+AGG | + | chr2.2:36655838-36655857 | MS.gene69866:CDS | 40.0% | |
| GCATAGTTTACAAGTCCAGA+AGG | - | chr2.2:36656001-36656020 | None:intergenic | 40.0% | |
| GTACTATCAACTACCTTCTC+AGG | + | chr2.2:36658065-36658084 | MS.gene69866:CDS | 40.0% | |
| GTCTGGATTTGGAAGGAAAT+TGG | - | chr2.2:36657336-36657355 | None:intergenic | 40.0% | |
| TATACCTGATGCTGTTGTTC+CGG | + | chr2.2:36658538-36658557 | MS.gene69866:CDS | 40.0% | |
| TATGGAAAGTCGGTACATAG+TGG | + | chr2.2:36656089-36656108 | MS.gene69866:CDS | 40.0% | |
| TCTTGCTTCTCTTCTCAATC+TGG | + | chr2.2:36654858-36654877 | MS.gene69866:CDS | 40.0% | |
| TGGATTTGGAAGGAAATTGG+TGG | - | chr2.2:36657333-36657352 | None:intergenic | 40.0% | |
| TTGAACGTAACCACATGTGT+CGG | - | chr2.2:36657111-36657130 | None:intergenic | 40.0% | |
| ! | ACTTCAGATTGAAGGCATGT+CGG | + | chr2.2:36657059-36657078 | MS.gene69866:intron | 40.0% |
| ! | ATGCCTTCAATCTGAAGTGT+CGG | - | chr2.2:36657057-36657076 | None:intergenic | 40.0% |
| ! | CCATAATCACATTTCTGAGG+AGG | - | chr2.2:36654823-36654842 | None:intergenic | 40.0% |
| ! | GCAGACGTGTTTCTAACAAA+AGG | - | chr2.2:36655820-36655839 | None:intergenic | 40.0% |
| ! | TTTGTGCAACTTTGGATTGG+TGG | + | chr2.2:36654797-36654816 | MS.gene69866:CDS | 40.0% |
| !! | ATCAGTGTTGTTTCTGGTGT+TGG | + | chr2.2:36657155-36657174 | MS.gene69866:intron | 40.0% |
| !! | CGGTTTTGTCCGTAGTTAAT+AGG | + | chr2.2:36657577-36657596 | MS.gene69866:intron | 40.0% |
| !! | GTCCAGGTTGATCAATAGTA+TGG | - | chr2.2:36658231-36658250 | None:intergenic | 40.0% |
| AAAGTGGTGTAGCAGACTTG+AGG | - | chr2.2:36657516-36657535 | None:intergenic | 45.0% | |
| ACACCGACACTTCAGATTGA+AGG | + | chr2.2:36657051-36657070 | MS.gene69866:intron | 45.0% | |
| ATACGACATGTGTTCGACAC+CGG | + | chr2.2:36655118-36655137 | MS.gene69866:intron | 45.0% | |
| ATGTTCCATGTGTGAGAGGA+AGG | + | chr2.2:36657758-36657777 | MS.gene69866:intron | 45.0% | |
| ATTCATTGCCTGCCAGTGAA+AGG | - | chr2.2:36656308-36656327 | None:intergenic | 45.0% | |
| CTGGTCCAAGGCTATAAATG+TGG | - | chr2.2:36656530-36656549 | None:intergenic | 45.0% | |
| GAGGTTTCTTTGATGCAACG+TGG | + | chr2.2:36656454-36656473 | MS.gene69866:CDS | 45.0% | |
| GAGTACCATCTAACTCCACA+GGG | + | chr2.2:36658371-36658390 | MS.gene69866:CDS | 45.0% | |
| GCTAATGTTCCATGTGTGAG+AGG | + | chr2.2:36657754-36657773 | MS.gene69866:intron | 45.0% | |
| GTGGTTATACAGAAGGACCT+TGG | + | chr2.2:36656108-36656127 | MS.gene69866:CDS | 45.0% | |
| GTTGCATCAAAGAAACCTCC+AGG | - | chr2.2:36656453-36656472 | None:intergenic | 45.0% | |
| TAGTTAATAGGCACCTCGGT+GGG | + | chr2.2:36657589-36657608 | MS.gene69866:intron | 45.0% | |
| TCCGTAGTTAATAGGCACCT+CGG | + | chr2.2:36657585-36657604 | MS.gene69866:intron | 45.0% | |
| TGATTGAGTTCGTCCCATCT+TGG | - | chr2.2:36655877-36655896 | None:intergenic | 45.0% | |
| TGCAGACAGAGTTTGATAGG+AGG | + | chr2.2:36657287-36657306 | MS.gene69866:CDS | 45.0% | |
| TGGCAGGCAATGAATTGAGT+GGG | + | chr2.2:36656313-36656332 | MS.gene69866:intron | 45.0% | |
| TGGCAGTTTGCAAGATGAAC+TGG | + | chr2.2:36655759-36655778 | MS.gene69866:CDS | 45.0% | |
| ! | ACCGAGGTGCCTATTAACTA+CGG | - | chr2.2:36657589-36657608 | None:intergenic | 45.0% |
| ! | AGAGTACCATCTAACTCCAC+AGG | + | chr2.2:36658370-36658389 | MS.gene69866:CDS | 45.0% |
| ! | CACATTTATAGCCTTGGACC+AGG | + | chr2.2:36656528-36656547 | MS.gene69866:CDS | 45.0% |
| ! | GAGTATTCGAGTTCGGAACA+TGG | + | chr2.2:36657811-36657830 | MS.gene69866:intron | 45.0% |
| !! | TGACTAATGGATTCGCCTTC+TGG | + | chr2.2:36655983-36656002 | MS.gene69866:intron | 45.0% |
| AAGCCATTAGTCATTGCGCC+TGG | + | chr2.2:36656432-36656451 | MS.gene69866:CDS | 50.0% | |
| ACAACCGTCGAAGCGACATT+TGG | + | chr2.2:36658257-36658276 | MS.gene69866:CDS | 50.0% | |
| AGGAACCTCAGCAACAGCAT+GGG | + | chr2.2:36656896-36656915 | MS.gene69866:CDS | 50.0% | |
| AGTGAGCTAGCTCCTTTCAC+TGG | + | chr2.2:36656293-36656312 | MS.gene69866:intron | 50.0% | |
| AGTTCGTCCCATCTTGGCAT+TGG | - | chr2.2:36655871-36655890 | None:intergenic | 50.0% | |
| CTGGCAGGCAATGAATTGAG+TGG | + | chr2.2:36656312-36656331 | MS.gene69866:intron | 50.0% | |
| GAAGGTCCAACTGTCTGTGT+CGG | + | chr2.2:36657776-36657795 | MS.gene69866:intron | 50.0% | |
| GCACAGATACGGATACGACA+CGG | + | chr2.2:36654988-36655007 | MS.gene69866:intron | 50.0% | |
| GCAGGCAATGAATTGAGTGG+GGG | + | chr2.2:36656315-36656334 | MS.gene69866:intron | 50.0% | |
| GGCAGGCAATGAATTGAGTG+GGG | + | chr2.2:36656314-36656333 | MS.gene69866:intron | 50.0% | |
| GGCGCAATGACTAATGGCTT+AGG | - | chr2.2:36656432-36656451 | None:intergenic | 50.0% | |
| GTAGTTAATAGGCACCTCGG+TGG | + | chr2.2:36657588-36657607 | MS.gene69866:intron | 50.0% | |
| GTTCGTCCCATCTTGGCATT+GGG | - | chr2.2:36655870-36655889 | None:intergenic | 50.0% | |
| TACCATCTAACTCCACAGGG+TGG | + | chr2.2:36658374-36658393 | MS.gene69866:CDS | 50.0% | |
| TACGACATGTGTTCGACACC+GGG | + | chr2.2:36655119-36655138 | MS.gene69866:intron | 50.0% | |
| TAGCCCACTGTCAAGGCTAA+GGG | + | chr2.2:36657674-36657693 | MS.gene69866:intron | 50.0% | |
| TATGAAGCACGGACACTCCT+CGG | - | chr2.2:36655156-36655175 | None:intergenic | 50.0% | |
| TCAGGAGGGGCTTATAACAG+TGG | + | chr2.2:36656927-36656946 | MS.gene69866:CDS | 50.0% | |
| TGGTGTAGCAGACTTGAGGT+CGG | - | chr2.2:36657512-36657531 | None:intergenic | 50.0% | |
| TGTCAAGGCTAAGGGGCTAA+AGG | + | chr2.2:36657682-36657701 | MS.gene69866:intron | 50.0% | |
| TTCCACCCTGTGGAGTTAGA+TGG | - | chr2.2:36658379-36658398 | None:intergenic | 50.0% | |
| TTGGACCTTCCTCTCACACA+TGG | - | chr2.2:36657766-36657785 | None:intergenic | 50.0% | |
| ! | ATCGCCAAATGTCGCTTCGA+CGG | - | chr2.2:36658264-36658283 | None:intergenic | 50.0% |
| ! | CCAGGTACTTTTCGCCGAAT+TGG | + | chr2.2:36656546-36656565 | MS.gene69866:intron | 50.0% |
| ! | GCTTTTCCGACACAGACAGT+TGG | - | chr2.2:36657785-36657804 | None:intergenic | 50.0% |
| ! | GGGTCTTGTGTAAGCTGTCA+CGG | + | chr2.2:36657557-36657576 | MS.gene69866:intron | 50.0% |
| ! | TGTCGGTGTTCGACACTTGT+TGG | + | chr2.2:36657076-36657095 | MS.gene69866:intron | 50.0% |
| !! | AGGAGTTGATACGCACCTTG+TGG | + | chr2.2:36656797-36656816 | MS.gene69866:intron | 50.0% |
| !! | CCAATTCGGCGAAAAGTACC+TGG | - | chr2.2:36656549-36656568 | None:intergenic | 50.0% |
| !! | CTTCTTTGGCACCGACTCAT+GGG | + | chr2.2:36658035-36658054 | MS.gene69866:CDS | 50.0% |
| !! | TACAAGTGTCGGTGTCGTGA+CGG | + | chr2.2:36655067-36655086 | MS.gene69866:intron | 50.0% |
| !! | TCGGCATTGGTGTAGTTCCA+AGG | - | chr2.2:36656128-36656147 | None:intergenic | 50.0% |
| !! | TCTTCTTTGGCACCGACTCA+TGG | + | chr2.2:36658034-36658053 | MS.gene69866:CDS | 50.0% |
| ACCAACCCATGCTGTTGCTG+AGG | - | chr2.2:36656904-36656923 | None:intergenic | 55.0% | |
| ACCTCAGCAACAGCATGGGT+TGG | + | chr2.2:36656900-36656919 | MS.gene69866:CDS | 55.0% | |
| AGCCCACTGTCAAGGCTAAG+GGG | + | chr2.2:36657675-36657694 | MS.gene69866:intron | 55.0% | |
| AGCTAGCTCCTTTCACTGGC+AGG | + | chr2.2:36656297-36656316 | MS.gene69866:intron | 55.0% | |
| CAAGCCGGAACAACAGCATC+AGG | - | chr2.2:36658545-36658564 | None:intergenic | 55.0% | |
| CAGGAACCTCAGCAACAGCA+TGG | + | chr2.2:36656895-36656914 | MS.gene69866:CDS | 55.0% | |
| CCATTAGTCATTGCGCCTGG+AGG | + | chr2.2:36656435-36656454 | MS.gene69866:CDS | 55.0% | |
| CCTCCAGGCGCAATGACTAA+TGG | - | chr2.2:36656438-36656457 | None:intergenic | 55.0% | |
| CTCGGTGGGTAGATTAGGGT+GGG | + | chr2.2:36657603-36657622 | MS.gene69866:intron | 55.0% | |
| GAATTGAGTGGGGGTGGAGT+TGG | + | chr2.2:36656324-36656343 | MS.gene69866:CDS | 55.0% | |
| GACACGAGACGTGTCAGTGT+CGG | + | chr2.2:36655095-36655114 | MS.gene69866:intron | 55.0% | |
| GCACCTCGGTGGGTAGATTA+GGG | + | chr2.2:36657599-36657618 | MS.gene69866:intron | 55.0% | |
| GGAACAGTAGCCCACTGTCA+AGG | + | chr2.2:36657667-36657686 | MS.gene69866:intron | 55.0% | |
| GGAACATTAGCGCCGTCTGT+GGG | - | chr2.2:36657745-36657764 | None:intergenic | 55.0% | |
| GGCAATGAATTGAGTGGGGG+TGG | + | chr2.2:36656318-36656337 | MS.gene69866:intron | 55.0% | |
| GTACACCGCTTCCCATGAGT+CGG | - | chr2.2:36658049-36658068 | None:intergenic | 55.0% | |
| GTAGCCCACTGTCAAGGCTA+AGG | + | chr2.2:36657673-36657692 | MS.gene69866:intron | 55.0% | |
| GTATCTCACGCCGACACATG+TGG | + | chr2.2:36657098-36657117 | MS.gene69866:intron | 55.0% | |
| GTGCCTCCCAATGCCAAGAT+GGG | + | chr2.2:36655861-36655880 | MS.gene69866:CDS | 55.0% | |
| TGGAACATTAGCGCCGTCTG+TGG | - | chr2.2:36657746-36657765 | None:intergenic | 55.0% | |
| ! | CGACGGTTGTGTTGTTGTCC+AGG | - | chr2.2:36658247-36658266 | None:intergenic | 55.0% |
| ! | GATGCTGTTGTTCCGGCTTG+CGG | + | chr2.2:36658545-36658564 | MS.gene69866:CDS | 55.0% |
| !! | ACAGCATGGGTTGGTGAGTC+AGG | + | chr2.2:36656909-36656928 | MS.gene69866:CDS | 55.0% |
| !! | AGCCCCTTAGCCTTGACAGT+GGG | - | chr2.2:36657680-36657699 | None:intergenic | 55.0% |
| !! | ATGGGTTGGTGAGTCAGGAG+GGG | + | chr2.2:36656914-36656933 | MS.gene69866:CDS | 55.0% |
| !! | CATGGGTTGGTGAGTCAGGA+GGG | + | chr2.2:36656913-36656932 | MS.gene69866:CDS | 55.0% |
| !! | GGCGAAAAGTACCTGGTCCA+AGG | - | chr2.2:36656542-36656561 | None:intergenic | 55.0% |
| !! | TAGCCCCTTAGCCTTGACAG+TGG | - | chr2.2:36657681-36657700 | None:intergenic | 55.0% |
| CCACCCTAATCTACCCACCG+AGG | - | chr2.2:36657605-36657624 | None:intergenic | 60.0% | |
| CCTCGGTGGGTAGATTAGGG+TGG | + | chr2.2:36657602-36657621 | MS.gene69866:intron | 60.0% | |
| GCACGGACACTCCTCGGATT+AGG | - | chr2.2:36655150-36655169 | None:intergenic | 60.0% | |
| GGCACCTCGGTGGGTAGATT+AGG | + | chr2.2:36657598-36657617 | MS.gene69866:intron | 60.0% | |
| GGTGCCTCCCAATGCCAAGA+TGG | + | chr2.2:36655860-36655879 | MS.gene69866:CDS | 60.0% | |
| ! | CGTCCCATCTTGGCATTGGG+AGG | - | chr2.2:36655867-36655886 | None:intergenic | 60.0% |
| ! | TCCTCGGATTAGGCGTGTCC+CGG | - | chr2.2:36655140-36655159 | None:intergenic | 60.0% |
| !! | GCATGGGTTGGTGAGTCAGG+AGG | + | chr2.2:36656912-36656931 | MS.gene69866:CDS | 60.0% |
| !! | TGGCACCGACTCATGGGAAG+CGG | + | chr2.2:36658041-36658060 | MS.gene69866:CDS | 60.0% |
| !! | TGTCGGTGTCGTGACGGTGT+CGG | + | chr2.2:36655073-36655092 | MS.gene69866:intron | 60.0% |
| ACCGGGACACGCCTAATCCG+AGG | + | chr2.2:36655136-36655155 | MS.gene69866:intron | 65.0% | |
| GTGTGCACTCGCACGAGCGC+AGG | + | chr2.2:36655941-36655960 | MS.gene69866:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.2 | gene | 36654634 | 36658571 | 36654634 | ID=MS.gene69866 |
| chr2.2 | mRNA | 36654634 | 36658571 | 36654634 | ID=MS.gene69866.t1;Parent=MS.gene69866 |
| chr2.2 | exon | 36654634 | 36654879 | 36654634 | ID=MS.gene69866.t1.exon1;Parent=MS.gene69866.t1 |
| chr2.2 | CDS | 36654634 | 36654879 | 36654634 | ID=cds.MS.gene69866.t1;Parent=MS.gene69866.t1 |
| chr2.2 | exon | 36655572 | 36655608 | 36655572 | ID=MS.gene69866.t1.exon2;Parent=MS.gene69866.t1 |
| chr2.2 | CDS | 36655572 | 36655608 | 36655572 | ID=cds.MS.gene69866.t1;Parent=MS.gene69866.t1 |
| chr2.2 | exon | 36655731 | 36655914 | 36655731 | ID=MS.gene69866.t1.exon3;Parent=MS.gene69866.t1 |
| chr2.2 | CDS | 36655731 | 36655914 | 36655731 | ID=cds.MS.gene69866.t1;Parent=MS.gene69866.t1 |
| chr2.2 | exon | 36656058 | 36656203 | 36656058 | ID=MS.gene69866.t1.exon4;Parent=MS.gene69866.t1 |
| chr2.2 | CDS | 36656058 | 36656203 | 36656058 | ID=cds.MS.gene69866.t1;Parent=MS.gene69866.t1 |
| chr2.2 | exon | 36656319 | 36656549 | 36656319 | ID=MS.gene69866.t1.exon5;Parent=MS.gene69866.t1 |
| chr2.2 | CDS | 36656319 | 36656549 | 36656319 | ID=cds.MS.gene69866.t1;Parent=MS.gene69866.t1 |
| chr2.2 | exon | 36656799 | 36656988 | 36656799 | ID=MS.gene69866.t1.exon6;Parent=MS.gene69866.t1 |
| chr2.2 | CDS | 36656799 | 36656988 | 36656799 | ID=cds.MS.gene69866.t1;Parent=MS.gene69866.t1 |
| chr2.2 | exon | 36657238 | 36657363 | 36657238 | ID=MS.gene69866.t1.exon7;Parent=MS.gene69866.t1 |
| chr2.2 | CDS | 36657238 | 36657363 | 36657238 | ID=cds.MS.gene69866.t1;Parent=MS.gene69866.t1 |
| chr2.2 | exon | 36658031 | 36658130 | 36658031 | ID=MS.gene69866.t1.exon8;Parent=MS.gene69866.t1 |
| chr2.2 | CDS | 36658031 | 36658130 | 36658031 | ID=cds.MS.gene69866.t1;Parent=MS.gene69866.t1 |
| chr2.2 | exon | 36658218 | 36658571 | 36658218 | ID=MS.gene69866.t1.exon9;Parent=MS.gene69866.t1 |
| chr2.2 | CDS | 36658218 | 36658571 | 36658218 | ID=cds.MS.gene69866.t1;Parent=MS.gene69866.t1 |
| Gene Sequence |
| Protein sequence |
