Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene037458.t1 | XP_003604658.1 | 97.3 | 440 | 11 | 1 | 1 | 439 | 1 | 440 | 3.70E-253 | 883.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene037458.t1 | P48620 | 76.3 | 447 | 97 | 3 | 1 | 438 | 1 | 447 | 1.7e-206 | 719.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene037458.t1 | G7JN29 | 97.3 | 440 | 11 | 1 | 1 | 439 | 1 | 440 | 2.6e-253 | 883.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene037458 | MS.gene000112 | PPI |
| MS.gene017981 | MS.gene037458 | PPI |
| MS.gene037458 | MS.gene034496 | PPI |
| MS.gene072400 | MS.gene037458 | PPI |
| MS.gene037458 | MS.gene52655 | PPI |
| MS.gene037458 | MS.gene37076 | PPI |
| MS.gene037458 | MS.gene04619 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene037458.t1 | MTR_4g015630 | 97.955 | 440 | 8 | 1 | 1 | 439 | 1 | 440 | 0.0 | 889 |
| MS.gene037458.t1 | MTR_7g068780 | 74.273 | 447 | 106 | 2 | 1 | 439 | 1 | 446 | 0.0 | 690 |
| MS.gene037458.t1 | MTR_5g071170 | 68.617 | 376 | 110 | 1 | 65 | 432 | 10 | 385 | 0.0 | 555 |
| MS.gene037458.t1 | MTR_3g464330 | 71.508 | 358 | 102 | 0 | 82 | 439 | 26 | 383 | 0.0 | 540 |
| MS.gene037458.t1 | MTR_7g068780 | 71.765 | 340 | 87 | 2 | 1 | 332 | 1 | 339 | 1.03e-177 | 500 |
| MS.gene037458.t1 | MTR_1g054035 | 38.509 | 322 | 180 | 5 | 85 | 390 | 26 | 345 | 2.90e-68 | 222 |
| MS.gene037458.t1 | MTR_7g093200 | 36.932 | 352 | 193 | 8 | 58 | 391 | 56 | 396 | 3.03e-65 | 216 |
| MS.gene037458.t1 | MTR_1g111880 | 35.093 | 322 | 178 | 7 | 85 | 391 | 23 | 328 | 2.92e-54 | 185 |
| MS.gene037458.t1 | MTR_4g130980 | 29.118 | 340 | 215 | 12 | 62 | 392 | 75 | 397 | 4.54e-33 | 130 |
| MS.gene037458.t1 | MTR_2g460790 | 29.360 | 344 | 214 | 12 | 60 | 392 | 73 | 398 | 3.65e-31 | 124 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene037458.t1 | AT5G05580 | 74.208 | 442 | 102 | 4 | 1 | 437 | 1 | 435 | 0.0 | 680 |
| MS.gene037458.t1 | AT3G11170 | 71.493 | 442 | 117 | 2 | 1 | 435 | 1 | 440 | 0.0 | 650 |
| MS.gene037458.t1 | AT5G05580 | 73.506 | 385 | 90 | 4 | 1 | 380 | 1 | 378 | 0.0 | 586 |
| MS.gene037458.t1 | AT2G29980 | 68.766 | 381 | 119 | 0 | 59 | 439 | 2 | 382 | 0.0 | 556 |
| MS.gene037458.t1 | AT2G29980 | 67.153 | 274 | 90 | 0 | 59 | 332 | 2 | 275 | 2.12e-134 | 388 |
| MS.gene037458.t1 | AT3G12120 | 37.654 | 324 | 182 | 8 | 85 | 391 | 25 | 345 | 5.48e-67 | 219 |
| MS.gene037458.t1 | AT3G12120 | 37.654 | 324 | 182 | 8 | 85 | 391 | 25 | 345 | 5.48e-67 | 219 |
| MS.gene037458.t1 | AT4G30950 | 29.586 | 338 | 215 | 12 | 59 | 389 | 74 | 395 | 1.42e-31 | 125 |
Find 100 sgRNAs with CRISPR-Local
Find 241 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTCAATTACTCAAGCTTTA+TGG | 0.136027 | 4.1:-80600928 | MS.gene037458:CDS |
| GGCACAAACAAGTCACTATT+TGG | 0.140954 | 4.1:+80601039 | None:intergenic |
| GGTTTGTTTGGCCACTTTAT+TGG | 0.187935 | 4.1:-80602628 | MS.gene037458:CDS |
| CTGCTCAAGGAACAATGTTT+TGG | 0.221412 | 4.1:-80602604 | MS.gene037458:CDS |
| GCTATGGCTGCTTTGCTTGT+AGG | 0.251364 | 4.1:-80600973 | MS.gene037458:CDS |
| TTGTGTTTGTTCTTGGTTTA+GGG | 0.253549 | 4.1:+80602981 | None:intergenic |
| CTTATATCACCTAATGTAAA+AGG | 0.263942 | 4.1:+80602767 | None:intergenic |
| GGTGCACCAGGGTCAAAATT+TGG | 0.265489 | 4.1:+80602794 | None:intergenic |
| AATGAAATTGTGTTTGTTCT+TGG | 0.270224 | 4.1:+80602974 | None:intergenic |
| ATTGTGTTTGTTCTTGGTTT+AGG | 0.275137 | 4.1:+80602980 | None:intergenic |
| GCTGCTTTGCTTGTAGGTTT+AGG | 0.278162 | 4.1:-80600967 | MS.gene037458:CDS |
| AATCTATGAGCTATGTTGTT+AGG | 0.285313 | 4.1:-80602703 | MS.gene037458:CDS |
| GGTAAAGGACTAGATTTCTT+TGG | 0.287183 | 4.1:+80599633 | None:intergenic |
| GTTTGTTTGGCCACTTTATT+GGG | 0.291498 | 4.1:-80602627 | MS.gene037458:CDS |
| TCTTCCTCTGCTACCCTTGA+AGG | 0.298684 | 4.1:+80602851 | None:intergenic |
| AAAGGGTATCTTCAGATCTA+AGG | 0.313778 | 4.1:-80602910 | MS.gene037458:CDS |
| AAAAGGTGGAGGGGTAGTTC+AGG | 0.318396 | 4.1:-80602822 | MS.gene037458:CDS |
| ATGTTAATAGTTGGTTTGTT+TGG | 0.321832 | 4.1:-80602640 | MS.gene037458:CDS |
| ACCATGGTAATTTGTCTTCA+TGG | 0.346135 | 4.1:+80600741 | None:intergenic |
| TCTTTGTTCTTGGTCATGAT+TGG | 0.352865 | 4.1:-80602577 | MS.gene037458:intron |
| CACCAGTGTCACTGACAAAA+TGG | 0.361992 | 4.1:+80599568 | None:intergenic |
| GCAGAGGAAGAAGAAGAAAA+AGG | 0.363282 | 4.1:-80602839 | MS.gene037458:CDS |
| ACCTAAACATTGTTGGGTTA+AGG | 0.363933 | 4.1:-80602735 | MS.gene037458:CDS |
| TAGATCTGAAGATACCCTTT+TGG | 0.370698 | 4.1:+80602913 | None:intergenic |
| GAGGCAGCTAAACCAGTTCT+TGG | 0.371883 | 4.1:-80599672 | MS.gene037458:CDS |
| TTGTAATATCTTCCAAGAAC+TGG | 0.377558 | 4.1:+80599660 | None:intergenic |
| TAAACATACCATCCATGATA+TGG | 0.377797 | 4.1:+80601929 | None:intergenic |
| ACAACTCTCGATCGTGACTA+TGG | 0.378968 | 4.1:-80600431 | MS.gene037458:CDS |
| CCTAAGTTAAACAGTGTTGC+GGG | 0.381423 | 4.1:-80601980 | MS.gene037458:CDS |
| CAGCTATACCTAAACATTGT+TGG | 0.384073 | 4.1:-80602742 | MS.gene037458:CDS |
| TAAAGCTTGAGTAATTGAAT+TGG | 0.388459 | 4.1:+80600931 | None:intergenic |
| GTAGAAGAGCCACTAAGGTT+AGG | 0.394730 | 4.1:+80599522 | None:intergenic |
| CAGGAATGGAGCTACCTTAG+AGG | 0.397812 | 4.1:-80600461 | MS.gene037458:CDS |
| GAGTTGTAAGTCCGCCTCTA+AGG | 0.398628 | 4.1:+80600447 | None:intergenic |
| ATTGTTGGGTTAAGGATCCT+TGG | 0.399359 | 4.1:-80602727 | MS.gene037458:CDS |
| AAGTGGTAGTGTGGGATTTG+AGG | 0.405657 | 4.1:+80600353 | None:intergenic |
| CCTTTACCATTTCACCTCCT+TGG | 0.406643 | 4.1:-80599618 | MS.gene037458:CDS |
| TCCTTAACCCAACAATGTTT+AGG | 0.408115 | 4.1:+80602734 | None:intergenic |
| TTGCTGCTTATGTTAATAGT+TGG | 0.419399 | 4.1:-80602649 | MS.gene037458:CDS |
| GTAGGTTTAGGATTTGTAAT+GGG | 0.420064 | 4.1:-80600955 | MS.gene037458:CDS |
| AGCTATACCTAAACATTGTT+GGG | 0.420218 | 4.1:-80602741 | MS.gene037458:CDS |
| GGAATGGAATTTACCACATA+AGG | 0.420459 | 4.1:+80600901 | None:intergenic |
| TGTAGGTTTAGGATTTGTAA+TGG | 0.421486 | 4.1:-80600956 | MS.gene037458:CDS |
| TAAGAGTGAGTGCTCCTTCA+AGG | 0.438496 | 4.1:-80602865 | MS.gene037458:CDS |
| AAATCTCCAAGGAGGTGAAA+TGG | 0.440919 | 4.1:+80599612 | None:intergenic |
| GCTTTATGGCATTCCTTATG+TGG | 0.442119 | 4.1:-80600914 | MS.gene037458:intron |
| GTAAAAGGTGGTGGTGCACC+AGG | 0.442471 | 4.1:+80602782 | None:intergenic |
| CAAACAGACCCTAACCTTAG+TGG | 0.442623 | 4.1:-80599531 | MS.gene037458:CDS |
| ATGGCCATGGTGATGCAAAT+AGG | 0.454958 | 4.1:+80600760 | None:intergenic |
| GCACAAACAAGTCACTATTT+GGG | 0.459556 | 4.1:+80601040 | None:intergenic |
| ATCTATGAGCTATGTTGTTA+GGG | 0.462681 | 4.1:-80602702 | MS.gene037458:CDS |
| GTGTTTGAATTCAGTGGAGC+AGG | 0.468799 | 4.1:-80601092 | MS.gene037458:intron |
| AGAGAAAATCTTCAAGAGCT+TGG | 0.481339 | 4.1:-80601431 | MS.gene037458:CDS |
| CCCGCAACACTGTTTAACTT+AGG | 0.489628 | 4.1:+80601980 | None:intergenic |
| TACTCACAGCTTCAATTAAG+TGG | 0.489994 | 4.1:+80600336 | None:intergenic |
| TAGAAGAGCCACTAAGGTTA+GGG | 0.494714 | 4.1:+80599523 | None:intergenic |
| TTCAGTGGAGCAGGAGTCCT+GGG | 0.495423 | 4.1:-80601083 | MS.gene037458:intron |
| ATTCAGTGGAGCAGGAGTCC+TGG | 0.502823 | 4.1:-80601084 | MS.gene037458:intron |
| TTTAAGCAAAACAACCAAAA+GGG | 0.507525 | 4.1:-80602927 | MS.gene037458:CDS |
| TGTTGTTAGGGATGTTGTTG+TGG | 0.508034 | 4.1:-80602690 | MS.gene037458:CDS |
| TAGAAAGGATATGCAAGCAT+TGG | 0.513379 | 4.1:+80601370 | None:intergenic |
| TTGATGTAGAAGAGCCACTA+AGG | 0.513464 | 4.1:+80599517 | None:intergenic |
| AAGTGAGAACCACTCTTCCC+AGG | 0.513601 | 4.1:+80601066 | None:intergenic |
| CCACTTTATTGGGCTGCTCA+AGG | 0.516126 | 4.1:-80602617 | MS.gene037458:CDS |
| GGATATGCAAGCATTGGAAA+AGG | 0.516624 | 4.1:+80601376 | None:intergenic |
| TTATTACCTCAACAGTATGT+TGG | 0.518216 | 4.1:-80600999 | MS.gene037458:CDS |
| GTTCTTGGTTTAGGGTACAA+TGG | 0.520187 | 4.1:+80602989 | None:intergenic |
| TTACAACTTACAAGGTAGAA+AGG | 0.522153 | 4.1:+80601355 | None:intergenic |
| TTAGGGTACAATGGTGGAAG+TGG | 0.522625 | 4.1:+80602998 | None:intergenic |
| ACCATCCATGATATGGTACT+AGG | 0.523521 | 4.1:+80601936 | None:intergenic |
| TCAATCCTAGTACCATATCA+TGG | 0.529822 | 4.1:-80601941 | MS.gene037458:CDS |
| AACAGTATGTTGGACAGCTA+TGG | 0.530932 | 4.1:-80600989 | MS.gene037458:CDS |
| TGCTCCTTCAAGGGTAGCAG+AGG | 0.533193 | 4.1:-80602855 | MS.gene037458:CDS |
| CCTTGAGCAGCCCAATAAAG+TGG | 0.543235 | 4.1:+80602617 | None:intergenic |
| AATAACATCCATCATGACAT+TGG | 0.543696 | 4.1:-80600401 | MS.gene037458:CDS |
| ATTACCATGGTATCGTGGAC+AGG | 0.548527 | 4.1:-80600729 | MS.gene037458:intron |
| CCAAGGAGGTGAAATGGTAA+AGG | 0.549624 | 4.1:+80599618 | None:intergenic |
| ATGTTGAAAATGATGAATCT+TGG | 0.550797 | 4.1:-80601766 | MS.gene037458:CDS |
| TCACCTAATGTAAAAGGTGG+TGG | 0.560118 | 4.1:+80602773 | None:intergenic |
| CTTCAATTAAGTGGTAGTGT+GGG | 0.565641 | 4.1:+80600345 | None:intergenic |
| TCCTAGTACCATATCATGGA+TGG | 0.566773 | 4.1:-80601937 | MS.gene037458:intron |
| TCCTAAGTTAAACAGTGTTG+CGG | 0.570080 | 4.1:-80601981 | MS.gene037458:CDS |
| GCTTCAATTAAGTGGTAGTG+TGG | 0.575416 | 4.1:+80600344 | None:intergenic |
| CATGAGTTCCAATGTCATGA+TGG | 0.588288 | 4.1:+80600393 | None:intergenic |
| AGCAGGAGTCCTGGGAAGAG+TGG | 0.590625 | 4.1:-80601075 | MS.gene037458:CDS |
| AAGAGTGAGTGCTCCTTCAA+GGG | 0.591398 | 4.1:-80602864 | MS.gene037458:CDS |
| GTGACCTATTTGCATCACCA+TGG | 0.611816 | 4.1:-80600764 | MS.gene037458:CDS |
| ATATCACCTAATGTAAAAGG+TGG | 0.614456 | 4.1:+80602770 | None:intergenic |
| GACAAATTACCATGGTATCG+TGG | 0.635203 | 4.1:-80600734 | MS.gene037458:CDS |
| ACATAGCTCATAGATTTCCA+AGG | 0.638388 | 4.1:+80602710 | None:intergenic |
| GTAATTTGTCTTCATGGCCA+TGG | 0.639785 | 4.1:+80600747 | None:intergenic |
| GATACCTGTCCACGATACCA+TGG | 0.640882 | 4.1:+80600725 | None:intergenic |
| AAATGATGAATCTTGGCACC+CGG | 0.642419 | 4.1:-80601759 | MS.gene037458:intron |
| CTTGGTTTAGGGTACAATGG+TGG | 0.643600 | 4.1:+80602992 | None:intergenic |
| AGCTGTCCAACATACTGTTG+AGG | 0.647019 | 4.1:+80600993 | None:intergenic |
| GAATGGAGCTACCTTAGAGG+CGG | 0.680144 | 4.1:-80600458 | MS.gene037458:CDS |
| AGAACACATCATCAAAACCA+TGG | 0.681922 | 4.1:-80601791 | MS.gene037458:CDS |
| TAAAAGGTGGTGGTGCACCA+GGG | 0.683201 | 4.1:+80602783 | None:intergenic |
| CTAAGTTAAACAGTGTTGCG+GGG | 0.690117 | 4.1:-80601979 | MS.gene037458:CDS |
| GCCATGAAGACAAATTACCA+TGG | 0.707625 | 4.1:-80600742 | MS.gene037458:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CTAAAAATAGATTAAAATAA+AGG | + | chr4.1:80601898-80601917 | None:intergenic | 10.0% |
| !! | TAAATTAATAGTATTAATCA+CGG | + | chr4.1:80602318-80602337 | None:intergenic | 10.0% |
| !! | TTAATTATCATAATATAAAC+TGG | + | chr4.1:80600491-80600510 | None:intergenic | 10.0% |
| !! | AAAAAAGAGTTAAAAAAAAG+TGG | + | chr4.1:80601696-80601715 | None:intergenic | 15.0% |
| !! | AAATTAATAGTATTAATCAC+GGG | + | chr4.1:80602317-80602336 | None:intergenic | 15.0% |
| !! | TAATACTATTAATTTACCTT+GGG | - | chr4.1:80602322-80602341 | MS.gene037458:intron | 15.0% |
| !! | TGAACAAAAATTAACATTAA+AGG | + | chr4.1:80600271-80600290 | None:intergenic | 15.0% |
| !! | TTAATACTATTAATTTACCT+TGG | - | chr4.1:80602321-80602340 | MS.gene037458:intron | 15.0% |
| !!! | AAATATGGTATTTTTATTCT+TGG | - | chr4.1:80600189-80600208 | MS.gene037458:intron | 15.0% |
| !!! | TAGTATATTTATGGTATTTT+AGG | - | chr4.1:80602486-80602505 | MS.gene037458:intron | 15.0% |
| !! | AACAATAGAAGCTTATAATT+AGG | - | chr4.1:80602455-80602474 | MS.gene037458:intron | 20.0% |
| !! | AAGTTTCTTATATGAAATCA+TGG | + | chr4.1:80600858-80600877 | None:intergenic | 20.0% |
| !! | ACAATAGAAGCTTATAATTA+GGG | - | chr4.1:80602456-80602475 | MS.gene037458:intron | 20.0% |
| !! | AGAATTTATAAGGAAAAGAA+TGG | + | chr4.1:80601852-80601871 | None:intergenic | 20.0% |
| !! | ATTTGATGAGAGAATTTATA+AGG | + | chr4.1:80601862-80601881 | None:intergenic | 20.0% |
| !! | CTAAATTTATTCCAAATGAA+AGG | + | chr4.1:80601943-80601962 | None:intergenic | 20.0% |
| !! | CTTAAAAATCTAATCTTTGA+AGG | + | chr4.1:80599605-80599624 | None:intergenic | 20.0% |
| !! | GAACTGAAAATCAATATTAA+AGG | + | chr4.1:80600036-80600055 | None:intergenic | 20.0% |
| !! | GCTATGATAATTGATAAATA+TGG | - | chr4.1:80600174-80600193 | MS.gene037458:intron | 20.0% |
| !! | TAAAGAAAAAACAACCAAAT+TGG | + | chr4.1:80600076-80600095 | None:intergenic | 20.0% |
| !! | TAGGTTGTTATAAATACTAA+TGG | - | chr4.1:80600218-80600237 | MS.gene037458:intron | 20.0% |
| !! | TGATAATTAATAATCATGTC+TGG | - | chr4.1:80600501-80600520 | MS.gene037458:intron | 20.0% |
| !! | TTGATGAATGAATAATTGAA+TGG | - | chr4.1:80602812-80602831 | MS.gene037458:CDS | 20.0% |
| !! | TTGTTAATCTTATCTTATGA+TGG | - | chr4.1:80601432-80601451 | MS.gene037458:CDS | 20.0% |
| !!! | AAGTTTATTTCTTGTTTATG+TGG | - | chr4.1:80602005-80602024 | MS.gene037458:CDS | 20.0% |
| !!! | AATTTGATGATATTTAAGAC+TGG | - | chr4.1:80602541-80602560 | MS.gene037458:intron | 20.0% |
| !!! | AGATTTGGAATTAAATGTAA+TGG | + | chr4.1:80601085-80601104 | None:intergenic | 20.0% |
| !!! | CTATTTCACAACATTTTTAA+TGG | + | chr4.1:80600958-80600977 | None:intergenic | 20.0% |
| !!! | GATTTTTGCTCAATTATTAT+TGG | - | chr4.1:80600110-80600129 | MS.gene037458:intron | 20.0% |
| !!! | TGTTGATTTTTTTTTCTTAG+TGG | - | chr4.1:80600300-80600319 | MS.gene037458:intron | 20.0% |
| !!! | TTTTGATGATTTTTTTTTCC+CGG | - | chr4.1:80600343-80600362 | MS.gene037458:CDS | 20.0% |
| !!! | TTTTTAAATAACTGCTAAAG+CGG | - | chr4.1:80600893-80600912 | MS.gene037458:intron | 20.0% |
| ! | AAGGTTTAAACCAAAAACAT+GGG | - | chr4.1:80599655-80599674 | MS.gene037458:CDS | 25.0% |
| ! | AATGAAATTGTGTTTGTTCT+TGG | + | chr4.1:80599575-80599594 | None:intergenic | 25.0% |
| ! | ACATAACAGATAGACTAAAT+TGG | + | chr4.1:80600244-80600263 | None:intergenic | 25.0% |
| ! | ATAATGCATATTATATGCAG+GGG | - | chr4.1:80600425-80600444 | MS.gene037458:CDS | 25.0% |
| ! | ATGTTGAAAATGATGAATCT+TGG | - | chr4.1:80600780-80600799 | MS.gene037458:CDS | 25.0% |
| ! | ATTCAATTACTCAAGCTTTA+TGG | - | chr4.1:80601618-80601637 | MS.gene037458:intron | 25.0% |
| ! | CAAAAACAGAGTTGAAATAT+GGG | + | chr4.1:80602674-80602693 | None:intergenic | 25.0% |
| ! | CAAACTATGGTAAAATAGTT+AGG | + | chr4.1:80601219-80601238 | None:intergenic | 25.0% |
| ! | CGGGTATATTTGAAAAAAAT+AGG | + | chr4.1:80602298-80602317 | None:intergenic | 25.0% |
| ! | CTTATATCACCTAATGTAAA+AGG | + | chr4.1:80599782-80599801 | None:intergenic | 25.0% |
| ! | GATAATGCATATTATATGCA+GGG | - | chr4.1:80600424-80600443 | MS.gene037458:CDS | 25.0% |
| ! | GGAATAAATTTAGAAGCAAT+TGG | - | chr4.1:80601950-80601969 | MS.gene037458:CDS | 25.0% |
| ! | GGACAAAAGTAGTATATTTA+TGG | - | chr4.1:80602477-80602496 | MS.gene037458:intron | 25.0% |
| ! | GGGAGATAAAAATTAAAGTT+GGG | - | chr4.1:80602342-80602361 | MS.gene037458:intron | 25.0% |
| ! | TAAAGCTTGAGTAATTGAAT+TGG | + | chr4.1:80601618-80601637 | None:intergenic | 25.0% |
| ! | TAAGGTTTAAACCAAAAACA+TGG | - | chr4.1:80599654-80599673 | MS.gene037458:CDS | 25.0% |
| ! | TATATTAACATCTTCCTATC+CGG | + | chr4.1:80600365-80600384 | None:intergenic | 25.0% |
| ! | TATCAAATAGCAGAAAATAG+AGG | + | chr4.1:80601025-80601044 | None:intergenic | 25.0% |
| ! | TGGGAGATAAAAATTAAAGT+TGG | - | chr4.1:80602341-80602360 | MS.gene037458:intron | 25.0% |
| ! | TTTAAGCAAAACAACCAAAA+GGG | - | chr4.1:80599619-80599638 | MS.gene037458:CDS | 25.0% |
| !! | AAGATTCATCATTTTCAACA+TGG | + | chr4.1:80600781-80600800 | None:intergenic | 25.0% |
| !! | ATAACATCTTTTCTCTCATT+TGG | + | chr4.1:80601531-80601550 | None:intergenic | 25.0% |
| !! | ATTTTCAGTTCAGTTACTAT+TGG | - | chr4.1:80600045-80600064 | MS.gene037458:intron | 25.0% |
| !! | GCTTTATCTTTCATTTTGTA+TGG | - | chr4.1:80602061-80602080 | MS.gene037458:intron | 25.0% |
| !! | TAATGTGACTATTTTGTGTA+TGG | + | chr4.1:80602400-80602419 | None:intergenic | 25.0% |
| !! | TATTTTCAGTGTTTACATGT+CGG | + | chr4.1:80601307-80601326 | None:intergenic | 25.0% |
| !! | TTTTAAGCAAAACAACCAAA+AGG | - | chr4.1:80599618-80599637 | MS.gene037458:CDS | 25.0% |
| !! | TTTTTATTAAATCTCCAAGG+AGG | + | chr4.1:80602945-80602964 | None:intergenic | 25.0% |
| !! | TTTTTATTCTTGGTCATGAT+AGG | - | chr4.1:80600199-80600218 | MS.gene037458:intron | 25.0% |
| !!! | ACAATGTTTTTATCAGAATG+TGG | - | chr4.1:80599518-80599537 | MS.gene037458:CDS | 25.0% |
| !!! | ACATGTTTTGCTATTAGTTA+TGG | - | chr4.1:80601240-80601259 | MS.gene037458:intron | 25.0% |
| !!! | ACTTTAATTTTTATCTCCCA+AGG | + | chr4.1:80602341-80602360 | None:intergenic | 25.0% |
| !!! | ATATTCACTGTTCTAGTTTA+TGG | - | chr4.1:80600817-80600836 | MS.gene037458:intron | 25.0% |
| !!! | ATGTTAATAGTTGGTTTGTT+TGG | - | chr4.1:80599906-80599925 | MS.gene037458:intron | 25.0% |
| !!! | TATAAACACGAGAGTATTTT+CGG | - | chr4.1:80602369-80602388 | MS.gene037458:intron | 25.0% |
| !!! | TGCTTTTTATTAAATCTCCA+AGG | + | chr4.1:80602948-80602967 | None:intergenic | 25.0% |
| AAAAAAAAGTGGCCAATTCA+TGG | + | chr4.1:80601685-80601704 | None:intergenic | 30.0% | |
| AAAAAACCAAGCCTTTCATT+TGG | - | chr4.1:80601929-80601948 | MS.gene037458:intron | 30.0% | |
| AACAGTGAATATAAGCTTAC+CGG | + | chr4.1:80600809-80600828 | None:intergenic | 30.0% | |
| AATAACATCCATCATGACAT+TGG | - | chr4.1:80602145-80602164 | MS.gene037458:intron | 30.0% | |
| AATCTATGAGCTATGTTGTT+AGG | - | chr4.1:80599843-80599862 | MS.gene037458:intron | 30.0% | |
| ACCACTAAATCAAGATTAGA+CGG | - | chr4.1:80602647-80602666 | MS.gene037458:CDS | 30.0% | |
| AGCAAAACATGTTCAAACTA+TGG | + | chr4.1:80601232-80601251 | None:intergenic | 30.0% | |
| AGCTATACCTAAACATTGTT+GGG | - | chr4.1:80599805-80599824 | MS.gene037458:intron | 30.0% | |
| ATATCACCTAATGTAAAAGG+TGG | + | chr4.1:80599779-80599798 | None:intergenic | 30.0% | |
| ATATTAACATCTTCCTATCC+GGG | + | chr4.1:80600364-80600383 | None:intergenic | 30.0% | |
| ATCTATGAGCTATGTTGTTA+GGG | - | chr4.1:80599844-80599863 | MS.gene037458:intron | 30.0% | |
| ATTGTGTTTGTTCTTGGTTT+AGG | + | chr4.1:80599569-80599588 | None:intergenic | 30.0% | |
| CCAAAAACAGAGTTGAAATA+TGG | + | chr4.1:80602675-80602694 | None:intergenic | 30.0% | |
| GGATAATGCATATTATATGC+AGG | - | chr4.1:80600423-80600442 | MS.gene037458:CDS | 30.0% | |
| GTTAGGTATTACAACTTACA+AGG | + | chr4.1:80601202-80601221 | None:intergenic | 30.0% | |
| TAAACATACCATCCATGATA+TGG | + | chr4.1:80600620-80600639 | None:intergenic | 30.0% | |
| TCATCAAGAATAGTGTAAAG+AGG | + | chr4.1:80602799-80602818 | None:intergenic | 30.0% | |
| TTACAACTTACAAGGTAGAA+AGG | + | chr4.1:80601194-80601213 | None:intergenic | 30.0% | |
| TTACATGCAATTACAAGTGT+CGG | - | chr4.1:80601347-80601366 | MS.gene037458:intron | 30.0% | |
| TTACTTATATTCAAGACCAG+AGG | - | chr4.1:80602583-80602602 | MS.gene037458:CDS | 30.0% | |
| TTATTACCTCAACAGTATGT+TGG | - | chr4.1:80601547-80601566 | MS.gene037458:intron | 30.0% | |
| TTCATGGTTAGAAAAAGTGA+TGG | + | chr4.1:80601669-80601688 | None:intergenic | 30.0% | |
| TTGTAATATCTTCCAAGAAC+TGG | + | chr4.1:80602889-80602908 | None:intergenic | 30.0% | |
| TTGTGTTTGTTCTTGGTTTA+GGG | + | chr4.1:80599568-80599587 | None:intergenic | 30.0% | |
| TTTATTCCAAATGAAAGGCT+TGG | + | chr4.1:80601938-80601957 | None:intergenic | 30.0% | |
| TTTGCTCAATTATTATTGGC+TGG | - | chr4.1:80600114-80600133 | MS.gene037458:intron | 30.0% | |
| ! | AATAATCATGTCTGGTGTTT+TGG | - | chr4.1:80600509-80600528 | MS.gene037458:intron | 30.0% |
| ! | ACTCTTAATTCCCATGTTTT+TGG | + | chr4.1:80599668-80599687 | None:intergenic | 30.0% |
| ! | ATCTTTCATTTTGTATGGAC+AGG | - | chr4.1:80602066-80602085 | MS.gene037458:intron | 30.0% |
| ! | CCATATTTCAACTCTGTTTT+TGG | - | chr4.1:80602672-80602691 | MS.gene037458:CDS | 30.0% |
| ! | GTAGGTTTAGGATTTGTAAT+GGG | - | chr4.1:80601591-80601610 | MS.gene037458:intron | 30.0% |
| ! | GTTTTGCTTATAATCAAGAG+CGG | + | chr4.1:80602262-80602281 | None:intergenic | 30.0% |
| ! | TGTAGGTTTAGGATTTGTAA+TGG | - | chr4.1:80601590-80601609 | MS.gene037458:intron | 30.0% |
| ! | TTGCTGCTTATGTTAATAGT+TGG | - | chr4.1:80599897-80599916 | MS.gene037458:intron | 30.0% |
| !! | TACTATTGGTTCAACCAATT+TGG | - | chr4.1:80600059-80600078 | MS.gene037458:intron | 30.0% |
| !! | TGGTGTTTTGGATATTTTAG+TGG | - | chr4.1:80600521-80600540 | MS.gene037458:intron | 30.0% |
| !!! | ATGATTTTTTTTTCCCGGAT+AGG | - | chr4.1:80600348-80600367 | MS.gene037458:CDS | 30.0% |
| !!! | CACTTTTTCTAACCATGAAT+TGG | - | chr4.1:80601670-80601689 | MS.gene037458:intron | 30.0% |
| !!! | GCTTGGTTTTTTCTTTCTAT+CGG | + | chr4.1:80601921-80601940 | None:intergenic | 30.0% |
| !!! | TTTGGATATTTTAGTGGTCA+TGG | - | chr4.1:80600527-80600546 | MS.gene037458:intron | 30.0% |
| AAGAAGAAGAAAAAGGTGGA+GGG | - | chr4.1:80599714-80599733 | MS.gene037458:intron | 35.0% | |
| ACAGTGAATATAAGCTTACC+GGG | + | chr4.1:80600808-80600827 | None:intergenic | 35.0% | |
| ACATAGCTCATAGATTTCCA+AGG | + | chr4.1:80599839-80599858 | None:intergenic | 35.0% | |
| ACCTAAACATTGTTGGGTTA+AGG | - | chr4.1:80599811-80599830 | MS.gene037458:intron | 35.0% | |
| AGAACACATCATCAAAACCA+TGG | - | chr4.1:80600755-80600774 | MS.gene037458:CDS | 35.0% | |
| AGAGAAAATCTTCAAGAGCT+TGG | - | chr4.1:80601115-80601134 | MS.gene037458:intron | 35.0% | |
| CAGCTATACCTAAACATTGT+TGG | - | chr4.1:80599804-80599823 | MS.gene037458:intron | 35.0% | |
| CATGGATGGTATGTTTATGT+AGG | - | chr4.1:80600623-80600642 | MS.gene037458:intron | 35.0% | |
| CCACTAAATCAAGATTAGAC+GGG | - | chr4.1:80602648-80602667 | MS.gene037458:CDS | 35.0% | |
| CTATAACGCTATAGTGTAGT+GGG | - | chr4.1:80600918-80600937 | MS.gene037458:CDS | 35.0% | |
| GCACAAACAAGTCACTATTT+GGG | + | chr4.1:80601509-80601528 | None:intergenic | 35.0% | |
| GGAATGGAATTTACCACATA+AGG | + | chr4.1:80601648-80601667 | None:intergenic | 35.0% | |
| GGTAAAGGACTAGATTTCTT+TGG | + | chr4.1:80602916-80602935 | None:intergenic | 35.0% | |
| GGTGTATGAATTGATCTATG+AGG | - | chr4.1:80601261-80601280 | MS.gene037458:intron | 35.0% | |
| TACTCACAGCTTCAATTAAG+TGG | + | chr4.1:80602213-80602232 | None:intergenic | 35.0% | |
| TAGAAAGGATATGCAAGCAT+TGG | + | chr4.1:80601179-80601198 | None:intergenic | 35.0% | |
| TAGCAGAAAATAGAGGTTAC+AGG | + | chr4.1:80601018-80601037 | None:intergenic | 35.0% | |
| TCAATCCTAGTACCATATCA+TGG | - | chr4.1:80600605-80600624 | MS.gene037458:intron | 35.0% | |
| TCCTAAGTTAAACAGTGTTG+CGG | - | chr4.1:80600565-80600584 | MS.gene037458:intron | 35.0% | |
| TCCTTAACCCAACAATGTTT+AGG | + | chr4.1:80599815-80599834 | None:intergenic | 35.0% | |
| TCTTTGTTCTTGGTCATGAT+TGG | - | chr4.1:80599969-80599988 | MS.gene037458:intron | 35.0% | |
| ! | AAGCTCTTGAAGATTTTCTC+TGG | + | chr4.1:80601116-80601135 | None:intergenic | 35.0% |
| ! | ACCATGGTAATTTGTCTTCA+TGG | + | chr4.1:80601808-80601827 | None:intergenic | 35.0% |
| ! | ACTTGAAGCTTTTTGTCATG+TGG | - | chr4.1:80601750-80601769 | MS.gene037458:intron | 35.0% |
| ! | ATGATGGTGTTTGAATTCAG+TGG | - | chr4.1:80601448-80601467 | MS.gene037458:intron | 35.0% |
| ! | CTTCAATTAAGTGGTAGTGT+GGG | + | chr4.1:80602204-80602223 | None:intergenic | 35.0% |
| ! | GGTTAGAAAAAGTGATGGAA+TGG | + | chr4.1:80601664-80601683 | None:intergenic | 35.0% |
| ! | GTTTGTTTGGCCACTTTATT+GGG | - | chr4.1:80599919-80599938 | MS.gene037458:intron | 35.0% |
| ! | TAGATCTGAAGATACCCTTT+TGG | + | chr4.1:80599636-80599655 | None:intergenic | 35.0% |
| ! | TCATTTTGTATGGACAGGAA+TGG | - | chr4.1:80602071-80602090 | MS.gene037458:intron | 35.0% |
| ! | TGCTCAAGGAACAATGTTTT+GGG | - | chr4.1:80599943-80599962 | MS.gene037458:intron | 35.0% |
| ! | TTTTGTCATGTGGTTGGATT+TGG | - | chr4.1:80601760-80601779 | MS.gene037458:CDS | 35.0% |
| !! | AAAGGGTATCTTCAGATCTA+AGG | - | chr4.1:80599636-80599655 | MS.gene037458:CDS | 35.0% |
| !! | GAATTTCCAAATTTTGACCC+TGG | - | chr4.1:80599746-80599765 | MS.gene037458:intron | 35.0% |
| !!! | TATTGGCTGGTATTTTTTCC+TGG | - | chr4.1:80600127-80600146 | MS.gene037458:intron | 35.0% |
| !!! | TGTTGTTGTGGTTTTTGGTT+TGG | - | chr4.1:80599868-80599887 | MS.gene037458:intron | 35.0% |
| AAAAGTCAAACTTTGCCACC+AGG | + | chr4.1:80600148-80600167 | None:intergenic | 40.0% | |
| AAATCTCCAAGGAGGTGAAA+TGG | + | chr4.1:80602937-80602956 | None:intergenic | 40.0% | |
| AAATGATGAATCTTGGCACC+CGG | - | chr4.1:80600787-80600806 | MS.gene037458:CDS | 40.0% | |
| AACAGTATGTTGGACAGCTA+TGG | - | chr4.1:80601557-80601576 | MS.gene037458:intron | 40.0% | |
| ACCAACTGAGTTAAGCTCAT+GGG | + | chr4.1:80600401-80600420 | None:intergenic | 40.0% | |
| ACCATCCATGATATGGTACT+AGG | + | chr4.1:80600613-80600632 | None:intergenic | 40.0% | |
| ACCGTCTGATCTTAATCCAA+CGG | - | chr4.1:80602722-80602741 | MS.gene037458:CDS | 40.0% | |
| ACCGTTGGATTAAGATCAGA+CGG | + | chr4.1:80602726-80602745 | None:intergenic | 40.0% | |
| AGAAGAAGAAAAAGGTGGAG+GGG | - | chr4.1:80599715-80599734 | MS.gene037458:intron | 40.0% | |
| ATGAGCTTAACTCAGTTGGT+AGG | - | chr4.1:80600401-80600420 | MS.gene037458:CDS | 40.0% | |
| ATTGTTGGGTTAAGGATCCT+TGG | - | chr4.1:80599819-80599838 | MS.gene037458:intron | 40.0% | |
| CATGAGTTCCAATGTCATGA+TGG | + | chr4.1:80602156-80602175 | None:intergenic | 40.0% | |
| CCCGTCTAATCTTGATTTAG+TGG | + | chr4.1:80602651-80602670 | None:intergenic | 40.0% | |
| CCTAAGTTAAACAGTGTTGC+GGG | - | chr4.1:80600566-80600585 | MS.gene037458:intron | 40.0% | |
| CTAAGTTAAACAGTGTTGCG+GGG | - | chr4.1:80600567-80600586 | MS.gene037458:intron | 40.0% | |
| GAAGAAGAAGAAAAAGGTGG+AGG | - | chr4.1:80599713-80599732 | MS.gene037458:intron | 40.0% | |
| GACAAATTACCATGGTATCG+TGG | - | chr4.1:80601812-80601831 | MS.gene037458:intron | 40.0% | |
| GAGGAAGAAGAAGAAAAAGG+TGG | - | chr4.1:80599710-80599729 | MS.gene037458:intron | 40.0% | |
| GCAGAGGAAGAAGAAGAAAA+AGG | - | chr4.1:80599707-80599726 | MS.gene037458:intron | 40.0% | |
| GCCATGAAGACAAATTACCA+TGG | - | chr4.1:80601804-80601823 | MS.gene037458:CDS | 40.0% | |
| GCTATAACGCTATAGTGTAG+TGG | - | chr4.1:80600917-80600936 | MS.gene037458:CDS | 40.0% | |
| GCTTTATGGCATTCCTTATG+TGG | - | chr4.1:80601632-80601651 | MS.gene037458:intron | 40.0% | |
| GGCACAAACAAGTCACTATT+TGG | + | chr4.1:80601510-80601529 | None:intergenic | 40.0% | |
| TACCAACTGAGTTAAGCTCA+TGG | + | chr4.1:80600402-80600421 | None:intergenic | 40.0% | |
| TAGAAGAGCCACTAAGGTTA+GGG | + | chr4.1:80603026-80603045 | None:intergenic | 40.0% | |
| TCACCTAATGTAAAAGGTGG+TGG | + | chr4.1:80599776-80599795 | None:intergenic | 40.0% | |
| TCCTAGTACCATATCATGGA+TGG | - | chr4.1:80600609-80600628 | MS.gene037458:intron | 40.0% | |
| TGCATATTATATGCAGGGGT+CGG | - | chr4.1:80600429-80600448 | MS.gene037458:CDS | 40.0% | |
| TGCTTATAATCAAGAGCGGA+CGG | + | chr4.1:80602258-80602277 | None:intergenic | 40.0% | |
| TGTTGTTAGGGATGTTGTTG+TGG | - | chr4.1:80599856-80599875 | MS.gene037458:intron | 40.0% | |
| TTCTTTCCTCTTGTAGACTG+AGG | - | chr4.1:80602855-80602874 | MS.gene037458:CDS | 40.0% | |
| TTGATGTAGAAGAGCCACTA+AGG | + | chr4.1:80603032-80603051 | None:intergenic | 40.0% | |
| ! | AGGGATGTTGTTGTGGTTTT+TGG | - | chr4.1:80599863-80599882 | MS.gene037458:intron | 40.0% |
| ! | CATCATTTTCAACATGGCCA+TGG | + | chr4.1:80600775-80600794 | None:intergenic | 40.0% |
| ! | CTGCTCAAGGAACAATGTTT+TGG | - | chr4.1:80599942-80599961 | MS.gene037458:intron | 40.0% |
| ! | GAAGCTTTTTGTCATGTGGT+TGG | - | chr4.1:80601754-80601773 | MS.gene037458:intron | 40.0% |
| ! | GCTTCAATTAAGTGGTAGTG+TGG | + | chr4.1:80602205-80602224 | None:intergenic | 40.0% |
| ! | GGTTTGTTTGGCCACTTTAT+TGG | - | chr4.1:80599918-80599937 | MS.gene037458:intron | 40.0% |
| ! | GTAATTTGTCTTCATGGCCA+TGG | + | chr4.1:80601802-80601821 | None:intergenic | 40.0% |
| ! | GTGCGTTTTACTAATTGTGC+AGG | - | chr4.1:80600720-80600739 | MS.gene037458:intron | 40.0% |
| ! | GTTCTTGGTTTAGGGTACAA+TGG | + | chr4.1:80599560-80599579 | None:intergenic | 40.0% |
| ! | TGAGCTTAACTCAGTTGGTA+GGG | - | chr4.1:80600402-80600421 | MS.gene037458:CDS | 40.0% |
| ! | TTTTGGGCTCTCTTTGTTCT+TGG | - | chr4.1:80599959-80599978 | MS.gene037458:intron | 40.0% |
| !! | GGATATGCAAGCATTGGAAA+AGG | + | chr4.1:80601173-80601192 | None:intergenic | 40.0% |
| AAGAGTGAGTGCTCCTTCAA+GGG | - | chr4.1:80599682-80599701 | MS.gene037458:intron | 45.0% | |
| ACAACTCTCGATCGTGACTA+TGG | - | chr4.1:80602115-80602134 | MS.gene037458:intron | 45.0% | |
| AGCTGTCCAACATACTGTTG+AGG | + | chr4.1:80601556-80601575 | None:intergenic | 45.0% | |
| ATTACCATGGTATCGTGGAC+AGG | - | chr4.1:80601817-80601836 | MS.gene037458:intron | 45.0% | |
| CAAACAGACCCTAACCTTAG+TGG | - | chr4.1:80603015-80603034 | MS.gene037458:CDS | 45.0% | |
| CAGTTACGCACATTTGACAC+AGG | + | chr4.1:80602761-80602780 | None:intergenic | 45.0% | |
| CATATTATATGCAGGGGTCG+GGG | - | chr4.1:80600431-80600450 | MS.gene037458:CDS | 45.0% | |
| CCAACTGAGTTAAGCTCATG+GGG | + | chr4.1:80600400-80600419 | None:intergenic | 45.0% | |
| CCAAGGAGGTGAAATGGTAA+AGG | + | chr4.1:80602931-80602950 | None:intergenic | 45.0% | |
| CCTTTACCATTTCACCTCCT+TGG | - | chr4.1:80602928-80602947 | MS.gene037458:CDS | 45.0% | |
| GCATATTATATGCAGGGGTC+GGG | - | chr4.1:80600430-80600449 | MS.gene037458:CDS | 45.0% | |
| GTAGAAGAGCCACTAAGGTT+AGG | + | chr4.1:80603027-80603046 | None:intergenic | 45.0% | |
| GTGACCTATTTGCATCACCA+TGG | - | chr4.1:80601782-80601801 | MS.gene037458:CDS | 45.0% | |
| GTGTTTGAATTCAGTGGAGC+AGG | - | chr4.1:80601454-80601473 | MS.gene037458:intron | 45.0% | |
| TAAGAGTGAGTGCTCCTTCA+AGG | - | chr4.1:80599681-80599700 | MS.gene037458:intron | 45.0% | |
| TAATCAAGAGCGGACGGATA+CGG | + | chr4.1:80602252-80602271 | None:intergenic | 45.0% | |
| TAGAATCCAAACACTGCCTC+TGG | + | chr4.1:80602602-80602621 | None:intergenic | 45.0% | |
| TCTCTGGCAACTGCAAGATT+TGG | + | chr4.1:80601100-80601119 | None:intergenic | 45.0% | |
| TGTAGCACAGACACTTCAGA+TGG | + | chr4.1:80601396-80601415 | None:intergenic | 45.0% | |
| ! | AAGTGGTAGTGTGGGATTTG+AGG | + | chr4.1:80602196-80602215 | None:intergenic | 45.0% |
| ! | ATGGCCATGGTGATGCAAAT+AGG | + | chr4.1:80601789-80601808 | None:intergenic | 45.0% |
| ! | CACCAGTGTCACTGACAAAA+TGG | + | chr4.1:80602981-80603000 | None:intergenic | 45.0% |
| ! | CCCGCAACACTGTTTAACTT+AGG | + | chr4.1:80600569-80600588 | None:intergenic | 45.0% |
| ! | CTTGGTTTAGGGTACAATGG+TGG | + | chr4.1:80599557-80599576 | None:intergenic | 45.0% |
| ! | GACCATTTTGTCAGTGACAC+TGG | - | chr4.1:80602976-80602995 | MS.gene037458:CDS | 45.0% |
| ! | GCACCACCACCTTTTACATT+AGG | - | chr4.1:80599770-80599789 | MS.gene037458:intron | 45.0% |
| ! | GCTGCTTTGCTTGTAGGTTT+AGG | - | chr4.1:80601579-80601598 | MS.gene037458:intron | 45.0% |
| ! | TTAGGGTACAATGGTGGAAG+TGG | + | chr4.1:80599551-80599570 | None:intergenic | 45.0% |
| !! | AAGTGTCGGTGTTGAACACT+CGG | - | chr4.1:80601361-80601380 | MS.gene037458:intron | 45.0% |
| !!! | TGGCTGGTATTTTTTCCTGG+TGG | - | chr4.1:80600130-80600149 | MS.gene037458:intron | 45.0% |
| AAAAGGTGGAGGGGTAGTTC+AGG | - | chr4.1:80599724-80599743 | MS.gene037458:intron | 50.0% | |
| AAGTGAGAACCACTCTTCCC+AGG | + | chr4.1:80601483-80601502 | None:intergenic | 50.0% | |
| ACTATAGCACTAGCGTGCAG+CGG | - | chr4.1:80600980-80600999 | MS.gene037458:CDS | 50.0% | |
| AGGCACGCTATCTTAACCGT+TGG | + | chr4.1:80602741-80602760 | None:intergenic | 50.0% | |
| CAGGAATGGAGCTACCTTAG+AGG | - | chr4.1:80602085-80602104 | MS.gene037458:intron | 50.0% | |
| CCACTTTATTGGGCTGCTCA+AGG | - | chr4.1:80599929-80599948 | MS.gene037458:intron | 50.0% | |
| CCCCATGAGCTTAACTCAGT+TGG | - | chr4.1:80600397-80600416 | MS.gene037458:CDS | 50.0% | |
| CCTTGAGCAGCCCAATAAAG+TGG | + | chr4.1:80599932-80599951 | None:intergenic | 50.0% | |
| GAATGGAGCTACCTTAGAGG+CGG | - | chr4.1:80602088-80602107 | MS.gene037458:intron | 50.0% | |
| GAGGCAGCTAAACCAGTTCT+TGG | - | chr4.1:80602874-80602893 | MS.gene037458:CDS | 50.0% | |
| GAGTTGTAAGTCCGCCTCTA+AGG | + | chr4.1:80602102-80602121 | None:intergenic | 50.0% | |
| GATACCTGTCCACGATACCA+TGG | + | chr4.1:80601824-80601843 | None:intergenic | 50.0% | |
| GGTGCACCAGGGTCAAAATT+TGG | + | chr4.1:80599755-80599774 | None:intergenic | 50.0% | |
| TAGCTGCCTCAGTCTACAAG+AGG | + | chr4.1:80602864-80602883 | None:intergenic | 50.0% | |
| TCAAGACCAGAGGCAGTGTT+TGG | - | chr4.1:80602593-80602612 | MS.gene037458:CDS | 50.0% | |
| TCTTCCTCTGCTACCCTTGA+AGG | + | chr4.1:80599698-80599717 | None:intergenic | 50.0% | |
| ! | GCTATGGCTGCTTTGCTTGT+AGG | - | chr4.1:80601573-80601592 | MS.gene037458:intron | 50.0% |
| ! | TAAAAGGTGGTGGTGCACCA+GGG | + | chr4.1:80599766-80599785 | None:intergenic | 50.0% |
| ATTCAGTGGAGCAGGAGTCC+TGG | - | chr4.1:80601462-80601481 | MS.gene037458:intron | 55.0% | |
| TGCTCCTTCAAGGGTAGCAG+AGG | - | chr4.1:80599691-80599710 | MS.gene037458:intron | 55.0% | |
| TTCAGTGGAGCAGGAGTCCT+GGG | - | chr4.1:80601463-80601482 | MS.gene037458:intron | 55.0% | |
| ! | GTAAAAGGTGGTGGTGCACC+AGG | + | chr4.1:80599767-80599786 | None:intergenic | 55.0% |
| AGCAGGAGTCCTGGGAAGAG+TGG | - | chr4.1:80601471-80601490 | MS.gene037458:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 80599512 | 80603056 | 80599512 | ID=MS.gene037458 |
| chr4.1 | mRNA | 80599512 | 80603056 | 80599512 | ID=MS.gene037458.t1;Parent=MS.gene037458 |
| chr4.1 | exon | 80602578 | 80603056 | 80602578 | ID=MS.gene037458.t1.exon1;Parent=MS.gene037458.t1 |
| chr4.1 | CDS | 80602578 | 80603056 | 80602578 | ID=cds.MS.gene037458.t1;Parent=MS.gene037458.t1 |
| chr4.1 | exon | 80601938 | 80602027 | 80601938 | ID=MS.gene037458.t1.exon2;Parent=MS.gene037458.t1 |
| chr4.1 | CDS | 80601938 | 80602027 | 80601938 | ID=cds.MS.gene037458.t1;Parent=MS.gene037458.t1 |
| chr4.1 | exon | 80601760 | 80601826 | 80601760 | ID=MS.gene037458.t1.exon3;Parent=MS.gene037458.t1 |
| chr4.1 | CDS | 80601760 | 80601826 | 80601760 | ID=cds.MS.gene037458.t1;Parent=MS.gene037458.t1 |
| chr4.1 | exon | 80601366 | 80601458 | 80601366 | ID=MS.gene037458.t1.exon4;Parent=MS.gene037458.t1 |
| chr4.1 | CDS | 80601366 | 80601458 | 80601366 | ID=cds.MS.gene037458.t1;Parent=MS.gene037458.t1 |
| chr4.1 | exon | 80600915 | 80601100 | 80600915 | ID=MS.gene037458.t1.exon5;Parent=MS.gene037458.t1 |
| chr4.1 | CDS | 80600915 | 80601100 | 80600915 | ID=cds.MS.gene037458.t1;Parent=MS.gene037458.t1 |
| chr4.1 | exon | 80600730 | 80600810 | 80600730 | ID=MS.gene037458.t1.exon6;Parent=MS.gene037458.t1 |
| chr4.1 | CDS | 80600730 | 80600810 | 80600730 | ID=cds.MS.gene037458.t1;Parent=MS.gene037458.t1 |
| chr4.1 | exon | 80600343 | 80600480 | 80600343 | ID=MS.gene037458.t1.exon7;Parent=MS.gene037458.t1 |
| chr4.1 | CDS | 80600343 | 80600480 | 80600343 | ID=cds.MS.gene037458.t1;Parent=MS.gene037458.t1 |
| chr4.1 | exon | 80599512 | 80599697 | 80599512 | ID=MS.gene037458.t1.exon8;Parent=MS.gene037458.t1 |
| chr4.1 | CDS | 80599512 | 80599697 | 80599512 | ID=cds.MS.gene037458.t1;Parent=MS.gene037458.t1 |
| Gene Sequence |
| Protein sequence |
