Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene037665.t1 | XP_013454911.1 | 95.3 | 532 | 25 | 0 | 1 | 532 | 1 | 532 | 2.50E-304 | 1053.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene037665.t1 | Q3HRQ2 | 71.8 | 514 | 140 | 2 | 22 | 531 | 9 | 521 | 2.2e-224 | 779.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene037665.t1 | A0A072UGT2 | 95.3 | 532 | 25 | 0 | 1 | 532 | 1 | 532 | 1.8e-304 | 1053.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene42280 | MS.gene037665 | PPI |
| MS.gene014446 | MS.gene037665 | PPI |
| MS.gene27027 | MS.gene037665 | PPI |
| MS.gene69423 | MS.gene037665 | PPI |
| MS.gene064736 | MS.gene037665 | PPI |
| MS.gene63972 | MS.gene037665 | PPI |
| MS.gene037665 | MS.gene82837 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene037665.t1 | MTR_4g019520 | 95.301 | 532 | 25 | 0 | 1 | 532 | 1 | 532 | 0.0 | 1003 |
| MS.gene037665.t1 | MTR_1g023570 | 45.192 | 520 | 262 | 9 | 28 | 531 | 30 | 542 | 4.32e-153 | 449 |
| MS.gene037665.t1 | MTR_7g114530 | 47.137 | 524 | 254 | 13 | 28 | 531 | 49 | 569 | 1.07e-151 | 446 |
| MS.gene037665.t1 | MTR_6g004960 | 44.894 | 519 | 263 | 11 | 32 | 531 | 1 | 515 | 1.45e-148 | 436 |
| MS.gene037665.t1 | MTR_5g038410 | 44.052 | 538 | 250 | 14 | 42 | 531 | 1 | 535 | 7.42e-148 | 435 |
| MS.gene037665.t1 | MTR_3g113210 | 44.402 | 527 | 265 | 13 | 28 | 531 | 33 | 554 | 3.39e-145 | 429 |
| MS.gene037665.t1 | MTR_3g075520 | 43.137 | 510 | 270 | 10 | 42 | 532 | 1 | 509 | 1.63e-137 | 408 |
| MS.gene037665.t1 | MTR_8g102900 | 40.684 | 526 | 287 | 10 | 28 | 532 | 112 | 633 | 2.01e-135 | 407 |
| MS.gene037665.t1 | MTR_6g088300 | 41.165 | 532 | 284 | 11 | 28 | 532 | 56 | 585 | 5.72e-133 | 399 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene037665.t1 | AT3G53950 | 68.927 | 531 | 156 | 4 | 8 | 531 | 15 | 543 | 0.0 | 763 |
| MS.gene037665.t1 | AT1G75620 | 48.263 | 518 | 250 | 11 | 28 | 532 | 35 | 547 | 6.95e-160 | 466 |
| MS.gene037665.t1 | AT3G57620 | 46.228 | 517 | 256 | 12 | 30 | 531 | 37 | 546 | 3.01e-157 | 459 |
| MS.gene037665.t1 | AT1G19900 | 44.894 | 519 | 269 | 10 | 28 | 531 | 31 | 547 | 7.30e-150 | 441 |
| MS.gene037665.t1 | AT1G14430 | 45.242 | 557 | 263 | 16 | 6 | 531 | 19 | 564 | 7.32e-148 | 436 |
| MS.gene037665.t1 | AT5G19580 | 42.155 | 529 | 281 | 13 | 22 | 531 | 71 | 593 | 1.51e-132 | 398 |
| MS.gene037665.t1 | AT1G67290 | 41.905 | 525 | 280 | 13 | 27 | 531 | 95 | 614 | 4.36e-131 | 395 |
Find 160 sgRNAs with CRISPR-Local
Find 203 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCGCAACCACGCCGCTTGGC+GGG | 0.243395 | 4.3:-79298099 | None:intergenic |
| GGAATTATTGAAGTGAATTT+AGG | 0.266676 | 4.3:+79297965 | MS.gene037665:CDS |
| ACCGGTTGGGTTACGGTTCA+TGG | 0.288813 | 4.3:+79297673 | MS.gene037665:CDS |
| AATCACACGGGTTGAATATT+CGG | 0.293301 | 4.3:-79296986 | None:intergenic |
| AGTGTGGCACGTGCTGATTT+TGG | 0.296052 | 4.3:-79296651 | None:intergenic |
| TAACGAAAACCGTGTGGTTC+GGG | 0.306132 | 4.3:+79297292 | MS.gene037665:CDS |
| AGCGGCGTGGTTGCGCCGCC+AGG | 0.308188 | 4.3:+79298106 | MS.gene037665:CDS |
| TTGAGGCTATGCCTGCGTTT+TGG | 0.321803 | 4.3:-79296698 | None:intergenic |
| TGCATTTCTTGAACGGAATA+CGG | 0.349741 | 4.3:+79297436 | MS.gene037665:CDS |
| GGCGGCGCAACCACGCCGCT+TGG | 0.352107 | 4.3:-79298103 | None:intergenic |
| ATCCGACCCGGTTTGGGAAA+TGG | 0.361268 | 4.3:+79297502 | MS.gene037665:CDS |
| GACGGGATCCGACCCGGTTT+GGG | 0.365091 | 4.3:+79297496 | MS.gene037665:CDS |
| TTCGGATCCGTGTTTGAATC+CGG | 0.366927 | 4.3:+79297631 | MS.gene037665:CDS |
| TTAACGAAAACCGTGTGGTT+CGG | 0.369932 | 4.3:+79297291 | MS.gene037665:CDS |
| GGCGCAACCACGCCGCTTGG+CGG | 0.377425 | 4.3:-79298100 | None:intergenic |
| CGACGGGATCCGACCCGGTT+TGG | 0.384357 | 4.3:+79297495 | MS.gene037665:CDS |
| ACCGACACATGGTGCTCTTC+TGG | 0.386972 | 4.3:+79296900 | MS.gene037665:CDS |
| TCGGGTTTACCCGGAGTTAA+CGG | 0.387975 | 4.3:+79297310 | MS.gene037665:CDS |
| CGGGTTTACCCGGAGTTAAC+GGG | 0.388275 | 4.3:+79297311 | MS.gene037665:CDS |
| ATTATCCATTTGTGTATCTT+CGG | 0.390138 | 4.3:-79297192 | None:intergenic |
| TGTTGTGAGTGTGCCTTTGC+CGG | 0.390556 | 4.3:+79297937 | MS.gene037665:CDS |
| TGAGAGAATAATGGGTGATA+TGG | 0.406764 | 4.3:+79297538 | MS.gene037665:CDS |
| AGAGTATTTGGATTCGGATA+AGG | 0.409050 | 4.3:+79297850 | MS.gene037665:CDS |
| GAATATTCGACCTGAGATAT+TGG | 0.410026 | 4.3:+79297874 | MS.gene037665:CDS |
| TGGTCGATGGTGATGGGAGG+TGG | 0.413657 | 4.3:+79298059 | MS.gene037665:CDS |
| TTCGCCAGAGTATTTGGATT+CGG | 0.413945 | 4.3:+79297844 | MS.gene037665:CDS |
| GGTCAACGGTTGGTCAAACT+TGG | 0.416891 | 4.3:+79298022 | MS.gene037665:CDS |
| TTTATATCGACCTGGTGAAC+CGG | 0.418791 | 4.3:+79297655 | MS.gene037665:CDS |
| TTATCCGTCGGCGGGTAGTT+CGG | 0.421655 | 4.3:+79297346 | MS.gene037665:CDS |
| TGCGCCGCCAGGTTATTATA+TGG | 0.425014 | 4.3:+79298117 | MS.gene037665:CDS |
| TTCGACGGCAAATTTGTTAC+CGG | 0.426779 | 4.3:+79297730 | MS.gene037665:CDS |
| TTCAACCCGTGTGATTCAAC+CGG | 0.427789 | 4.3:+79296993 | MS.gene037665:CDS |
| TATGCCGTTTGAGAGAATAA+TGG | 0.427793 | 4.3:+79297529 | MS.gene037665:CDS |
| CGCAACCACGCCGCTTGGCG+GGG | 0.431148 | 4.3:-79298098 | None:intergenic |
| CGTGTTCGCAAACACAAAAT+CGG | 0.440047 | 4.3:+79297256 | MS.gene037665:CDS |
| GAGTGTGCCTTTGCCGGTTG+TGG | 0.440384 | 4.3:+79297943 | MS.gene037665:CDS |
| TCTGGTTCATTTCTTCCAAA+CGG | 0.444311 | 4.3:+79296918 | MS.gene037665:CDS |
| TCTTCGGTTTCTTGCAGAAA+CGG | 0.444669 | 4.3:-79297176 | None:intergenic |
| ACTAGAAGCTCCCACGTGCC+GGG | 0.449893 | 4.3:-79296675 | None:intergenic |
| ATTCAACCGGGTCATGCGAT+TGG | 0.450450 | 4.3:+79297006 | MS.gene037665:CDS |
| GACTAGAAGCTCCCACGTGC+CGG | 0.450544 | 4.3:-79296676 | None:intergenic |
| GGCGGGTAGTTCGGTGATGC+TGG | 0.450658 | 4.3:+79297355 | MS.gene037665:CDS |
| TTAGGCACTTCCAATATCTC+AGG | 0.451205 | 4.3:-79297884 | None:intergenic |
| ATATCCTCCATTTCCCAAAC+CGG | 0.453250 | 4.3:-79297509 | None:intergenic |
| ATCGACCTGGTGAACCGGTT+GGG | 0.456060 | 4.3:+79297660 | MS.gene037665:CDS |
| TTGTGTTTGCGAACACGAAA+AGG | 0.460365 | 4.3:-79297250 | None:intergenic |
| CTCCCACGTGCCGGGGAGTG+TGG | 0.460957 | 4.3:-79296667 | None:intergenic |
| ATGCCGTTTGAGAGAATAAT+GGG | 0.461994 | 4.3:+79297530 | MS.gene037665:CDS |
| CTGGTGAACCGGTTGGGTTA+CGG | 0.466700 | 4.3:+79297666 | MS.gene037665:CDS |
| ACCATGAACCGTAACCCAAC+CGG | 0.468515 | 4.3:-79297674 | None:intergenic |
| AAACCGGTGGTGACTTAGAC+GGG | 0.468824 | 4.3:+79296952 | MS.gene037665:CDS |
| CCGTGTGGTTCGGGTTTACC+CGG | 0.471927 | 4.3:+79297301 | MS.gene037665:CDS |
| GAGGTGGAGGATTCGATGTA+TGG | 0.472183 | 4.3:+79298075 | MS.gene037665:CDS |
| TTGCGGCGCATGGGAGTTGT+GGG | 0.473306 | 4.3:+79297462 | MS.gene037665:CDS |
| GGGTTGGACCGATGTTGGTT+CGG | 0.478378 | 4.3:-79296764 | None:intergenic |
| CTCGGTCCACCCGTTAACTC+CGG | 0.479222 | 4.3:-79297320 | None:intergenic |
| ATTGCGGCGCATGGGAGTTG+TGG | 0.483609 | 4.3:+79297461 | MS.gene037665:CDS |
| TTCAACCGGGTCATGCGATT+GGG | 0.484013 | 4.3:+79297007 | MS.gene037665:CDS |
| CCGGTTCACTAAAACCAAAC+CGG | 0.484133 | 4.3:+79296812 | MS.gene037665:CDS |
| GATGCGGTGGTTGTTGTTTG+TGG | 0.487191 | 4.3:+79297398 | MS.gene037665:CDS |
| AGTGTGCCTTTGCCGGTTGT+GGG | 0.488361 | 4.3:+79297944 | MS.gene037665:CDS |
| ACTTCAATAATTCCCACAAC+CGG | 0.489533 | 4.3:-79297956 | None:intergenic |
| CTCTTCCCAATCGCATGACC+CGG | 0.491639 | 4.3:-79297012 | None:intergenic |
| ATGAGCGTAACAATCCGGTT+TGG | 0.492855 | 4.3:-79296826 | None:intergenic |
| TCGAATTAAGCGAAGGTCGT+TGG | 0.493274 | 4.3:+79297045 | MS.gene037665:CDS |
| GCATATTACAAAGAGAGAAA+TGG | 0.497041 | 4.3:-79296604 | None:intergenic |
| AATACGGATATTGCGGCGCA+TGG | 0.500268 | 4.3:+79297452 | MS.gene037665:CDS |
| CGATGTTGGTTCGGTCTAAG+AGG | 0.501043 | 4.3:-79296755 | None:intergenic |
| TCGGTGATGCTGGCTTTAGA+AGG | 0.505095 | 4.3:+79297365 | MS.gene037665:CDS |
| TCGATGGTGATGGGAGGTGG+AGG | 0.506870 | 4.3:+79298062 | MS.gene037665:CDS |
| CAAACCGGTGGTGACTTAGA+CGG | 0.512760 | 4.3:+79296951 | MS.gene037665:CDS |
| TAAAGTCTCGGCACAGTACC+CGG | 0.514411 | 4.3:-79297704 | None:intergenic |
| GCTAGTAAAACACGTCCATC+CGG | 0.516281 | 4.3:-79297749 | None:intergenic |
| ATGATGATGACGGAACCATC+TGG | 0.518424 | 4.3:-79297089 | None:intergenic |
| GTGCCACACTCCCCGGCACG+TGG | 0.518659 | 4.3:+79296664 | MS.gene037665:CDS |
| GTTTGTAAAAGTGAACCGTT+TGG | 0.519490 | 4.3:-79296933 | None:intergenic |
| TATCGACCTGGTGAACCGGT+TGG | 0.521135 | 4.3:+79297659 | MS.gene037665:CDS |
| CGTAACCCAACCGGTTCACC+AGG | 0.522888 | 4.3:-79297665 | None:intergenic |
| TCACCCATTATTCTCTCAAA+CGG | 0.523026 | 4.3:-79297533 | None:intergenic |
| GTTTGTGGCGGTGCTCAATA+CGG | 0.523510 | 4.3:+79297413 | MS.gene037665:CDS |
| GTCATCATCATCGGTGGAAG+AGG | 0.527761 | 4.3:+79297101 | MS.gene037665:CDS |
| TCGGTCCACCCGTTAACTCC+GGG | 0.528086 | 4.3:-79297319 | None:intergenic |
| AGAAACCGAAGATACACAAA+TGG | 0.528804 | 4.3:+79297187 | MS.gene037665:CDS |
| GTCAACGGTTGGTCAAACTT+GGG | 0.531494 | 4.3:+79298023 | MS.gene037665:CDS |
| TTTACGGGTTGGACCGATGT+TGG | 0.532259 | 4.3:-79296769 | None:intergenic |
| ACGGCAAATTTGTTACCGGA+TGG | 0.532461 | 4.3:+79297734 | MS.gene037665:CDS |
| ACTGAATGAGCGTAACAATC+CGG | 0.533549 | 4.3:-79296831 | None:intergenic |
| GTGCCTAAAACGGTGTTGTA+TGG | 0.535092 | 4.3:+79297899 | MS.gene037665:CDS |
| ATTATAAATGGAGCTATGAA+AGG | 0.537384 | 4.3:+79297587 | MS.gene037665:CDS |
| TCACCAGGTCGATATAAAAC+CGG | 0.538106 | 4.3:-79297650 | None:intergenic |
| TGTATCCAATGTGCCACACT+TGG | 0.543041 | 4.3:-79298163 | None:intergenic |
| AATACGGTGCATTTCTTGAA+CGG | 0.544808 | 4.3:+79297429 | MS.gene037665:CDS |
| TCAGCACGTGCCACACTCCC+CGG | 0.545385 | 4.3:+79296657 | MS.gene037665:CDS |
| GTGCCACACTTGGCACACCT+TGG | 0.545740 | 4.3:-79298153 | None:intergenic |
| ATTTATAATCAAAACATCAC+CGG | 0.555102 | 4.3:-79297573 | None:intergenic |
| AACACGAAAAGGTTACCGTT+AGG | 0.555856 | 4.3:-79297239 | None:intergenic |
| TATGTTCATCTTCTTCCTAA+CGG | 0.556701 | 4.3:+79297224 | MS.gene037665:CDS |
| GATATTGGAAGTGCCTAAAA+CGG | 0.558344 | 4.3:+79297889 | MS.gene037665:CDS |
| AAACGGTGTTGTATGGTGTA+GGG | 0.559559 | 4.3:+79297906 | MS.gene037665:CDS |
| GATGGTTCCGTCATCATCAT+CGG | 0.561725 | 4.3:+79297092 | MS.gene037665:CDS |
| CCGAGGAATTATCCGTCGGC+GGG | 0.561765 | 4.3:+79297338 | MS.gene037665:CDS |
| AAAACGGTGTTGTATGGTGT+AGG | 0.570247 | 4.3:+79297905 | MS.gene037665:CDS |
| ACGAATCAAATTCTTCCAGA+TGG | 0.571165 | 4.3:+79297074 | MS.gene037665:CDS |
| CTAGAAGCTCCCACGTGCCG+GGG | 0.574028 | 4.3:-79296674 | None:intergenic |
| TCAAAACGATAAAATACATG+TGG | 0.577395 | 4.3:-79297782 | None:intergenic |
| GTTAACTCTGCGATGGTCGA+TGG | 0.577646 | 4.3:+79298046 | MS.gene037665:CDS |
| TTTGGGAGGAGTTTACGGGT+TGG | 0.577906 | 4.3:-79296780 | None:intergenic |
| ACAAACAACAACCACCGCAT+CGG | 0.579944 | 4.3:-79297396 | None:intergenic |
| TCTGCGATGGTCGATGGTGA+TGG | 0.581038 | 4.3:+79298052 | MS.gene037665:CDS |
| CTGCGATGGTCGATGGTGAT+GGG | 0.584106 | 4.3:+79298053 | MS.gene037665:CDS |
| ATGGTATTTGCTGTTAACCA+AGG | 0.585088 | 4.3:+79298136 | MS.gene037665:CDS |
| CGATGTATGGCCCCGCCAAG+CGG | 0.590137 | 4.3:+79298088 | MS.gene037665:CDS |
| ATAATTCCCACAACCGGCAA+AGG | 0.595642 | 4.3:-79297950 | None:intergenic |
| CTCTTAGACCGAACCAACAT+CGG | 0.595788 | 4.3:+79296756 | MS.gene037665:CDS |
| TATCCTCCATTTCCCAAACC+GGG | 0.596564 | 4.3:-79297508 | None:intergenic |
| GATATGGTAATTCTACCAAC+CGG | 0.597681 | 4.3:+79297554 | MS.gene037665:CDS |
| TCAACGGTTGGTCAAACTTG+GGG | 0.599094 | 4.3:+79298024 | MS.gene037665:CDS |
| GCCGAGACTTTATCATTCGA+CGG | 0.600172 | 4.3:+79297715 | MS.gene037665:CDS |
| ATAATCAAAACATCACCGGT+TGG | 0.601564 | 4.3:-79297569 | None:intergenic |
| CTCCATTTCCCAAACCGGGT+CGG | 0.602491 | 4.3:-79297504 | None:intergenic |
| CCCGCCGACGGATAATTCCT+CGG | 0.603356 | 4.3:-79297338 | None:intergenic |
| ATTAGCGACGGGATCCGACC+CGG | 0.604219 | 4.3:+79297490 | MS.gene037665:CDS |
| ATACGGATATTGCGGCGCAT+GGG | 0.604957 | 4.3:+79297453 | MS.gene037665:CDS |
| CGGCGCATGGGAGTTGTGGG+CGG | 0.606382 | 4.3:+79297465 | MS.gene037665:CDS |
| TTATCCGAATCCAAATACTC+TGG | 0.606798 | 4.3:-79297848 | None:intergenic |
| CATGACCCGGTTGAATCACA+CGG | 0.611488 | 4.3:-79296999 | None:intergenic |
| GAACCCGTCTAAGTCACCAC+CGG | 0.611682 | 4.3:-79296955 | None:intergenic |
| TTAGGAAGAAGATGAACATA+CGG | 0.612849 | 4.3:-79297221 | None:intergenic |
| ACTTGGGGTTAACTCTGCGA+TGG | 0.618922 | 4.3:+79298039 | MS.gene037665:CDS |
| TGTGGGCGGATATTAGCGAC+GGG | 0.620984 | 4.3:+79297479 | MS.gene037665:CDS |
| TCTTCCACCGATGATGATGA+CGG | 0.621819 | 4.3:-79297099 | None:intergenic |
| TATGGCCCCGCCAAGCGGCG+TGG | 0.622941 | 4.3:+79298093 | MS.gene037665:CDS |
| TGAACGGAATACGGATATTG+CGG | 0.624955 | 4.3:+79297445 | MS.gene037665:CDS |
| GCCGTCGAATGATAAAGTCT+CGG | 0.626783 | 4.3:-79297716 | None:intergenic |
| TGCCACACTCCCCGGCACGT+GGG | 0.634104 | 4.3:+79296665 | MS.gene037665:CDS |
| GTGTGCCAAGTGTGGCACAT+TGG | 0.634546 | 4.3:+79298158 | MS.gene037665:CDS |
| CCGGGTAAACCCGAACCACA+CGG | 0.638410 | 4.3:-79297301 | None:intergenic |
| GCAAATACCATATAATAACC+TGG | 0.638725 | 4.3:-79298124 | None:intergenic |
| ACCGAGGAATTATCCGTCGG+CGG | 0.639122 | 4.3:+79297337 | MS.gene037665:CDS |
| TTGTGGGCGGATATTAGCGA+CGG | 0.639903 | 4.3:+79297478 | MS.gene037665:CDS |
| TCAACCCGTGTGATTCAACC+GGG | 0.642606 | 4.3:+79296994 | MS.gene037665:CDS |
| GTTTACCCGGAGTTAACGGG+TGG | 0.643181 | 4.3:+79297314 | MS.gene037665:CDS |
| CGACCCGGTTTGGGAAATGG+AGG | 0.646092 | 4.3:+79297505 | MS.gene037665:CDS |
| TGTTACTGTTGTGTGCATTG+AGG | 0.648238 | 4.3:-79296715 | None:intergenic |
| CAAAACGATAAAATACATGT+GGG | 0.651397 | 4.3:-79297781 | None:intergenic |
| CGATGGTCGATGGTGATGGG+AGG | 0.654954 | 4.3:+79298056 | MS.gene037665:CDS |
| CGGAGTTAACGGGTGGACCG+AGG | 0.655464 | 4.3:+79297321 | MS.gene037665:CDS |
| GGTTCCGTCATCATCATCGG+TGG | 0.657675 | 4.3:+79297095 | MS.gene037665:CDS |
| TATAAAACCGGATTCAAACA+CGG | 0.657766 | 4.3:-79297638 | None:intergenic |
| ATCACCGAACTACCCGCCGA+CGG | 0.658505 | 4.3:-79297350 | None:intergenic |
| AAGAGCACCATGTGTCGGTG+AGG | 0.658810 | 4.3:-79296896 | None:intergenic |
| ACCAGAAGAGCACCATGTGT+CGG | 0.660505 | 4.3:-79296901 | None:intergenic |
| TGGACCGAGGAATTATCCGT+CGG | 0.669449 | 4.3:+79297334 | MS.gene037665:CDS |
| AACGACGTCGAATTAAGCGA+AGG | 0.672371 | 4.3:+79297038 | MS.gene037665:CDS |
| GGAGCTATGAAAGGTACACA+AGG | 0.678870 | 4.3:+79297596 | MS.gene037665:CDS |
| GCGGTGGTTGTTGTTTGTGG+CGG | 0.680386 | 4.3:+79297401 | MS.gene037665:CDS |
| ATGACCCGGTTGAATCACAC+GGG | 0.686842 | 4.3:-79296998 | None:intergenic |
| TAACCAAGGTGTGCCAAGTG+TGG | 0.694344 | 4.3:+79298150 | MS.gene037665:CDS |
| GAGCTTCTAGTCCAAAACGC+AGG | 0.706658 | 4.3:+79296687 | MS.gene037665:CDS |
| AATACCATATAATAACCTGG+CGG | 0.792848 | 4.3:-79298121 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTTATAATCAAAACATCAC+CGG | - | chr4.3:79297576-79297595 | None:intergenic | 20.0% |
| ! | ATTATAAATGGAGCTATGAA+AGG | + | chr4.3:79297587-79297606 | MS.gene037665:CDS | 25.0% |
| ! | ATTATCCATTTGTGTATCTT+CGG | - | chr4.3:79297195-79297214 | None:intergenic | 25.0% |
| ! | CAAAACGATAAAATACATGT+GGG | - | chr4.3:79297784-79297803 | None:intergenic | 25.0% |
| ! | GGAATTATTGAAGTGAATTT+AGG | + | chr4.3:79297965-79297984 | MS.gene037665:CDS | 25.0% |
| ! | TCAAAACGATAAAATACATG+TGG | - | chr4.3:79297785-79297804 | None:intergenic | 25.0% |
| !! | ACATGTATTTTATCGTTTTG+AGG | + | chr4.3:79297784-79297803 | MS.gene037665:CDS | 25.0% |
| !!! | GGTGATGTTTTGATTATAAA+TGG | + | chr4.3:79297575-79297594 | MS.gene037665:CDS | 25.0% |
| AATACCATATAATAACCTGG+CGG | - | chr4.3:79298124-79298143 | None:intergenic | 30.0% | |
| GAAAAACTATGTGTAGCAAA+TGG | - | chr4.3:79297998-79298017 | None:intergenic | 30.0% | |
| GCAAATACCATATAATAACC+TGG | - | chr4.3:79298127-79298146 | None:intergenic | 30.0% | |
| GCATATTACAAAGAGAGAAA+TGG | - | chr4.3:79296607-79296626 | None:intergenic | 30.0% | |
| TATAAAACCGGATTCAAACA+CGG | - | chr4.3:79297641-79297660 | None:intergenic | 30.0% | |
| TATGTTCATCTTCTTCCTAA+CGG | + | chr4.3:79297224-79297243 | MS.gene037665:CDS | 30.0% | |
| TTAGGAAGAAGATGAACATA+CGG | - | chr4.3:79297224-79297243 | None:intergenic | 30.0% | |
| ! | ATAGTTTTTCACAAGGTCAA+CGG | + | chr4.3:79298008-79298027 | MS.gene037665:CDS | 30.0% |
| AATACGGTGCATTTCTTGAA+CGG | + | chr4.3:79297429-79297448 | MS.gene037665:CDS | 35.0% | |
| ACGAATCAAATTCTTCCAGA+TGG | + | chr4.3:79297074-79297093 | MS.gene037665:CDS | 35.0% | |
| ACTTCAATAATTCCCACAAC+CGG | - | chr4.3:79297959-79297978 | None:intergenic | 35.0% | |
| AGAAACCGAAGATACACAAA+TGG | + | chr4.3:79297187-79297206 | MS.gene037665:CDS | 35.0% | |
| ATAATCAAAACATCACCGGT+TGG | - | chr4.3:79297572-79297591 | None:intergenic | 35.0% | |
| GAATATTCGACCTGAGATAT+TGG | + | chr4.3:79297874-79297893 | MS.gene037665:CDS | 35.0% | |
| GATATGGTAATTCTACCAAC+CGG | + | chr4.3:79297554-79297573 | MS.gene037665:CDS | 35.0% | |
| GTTTGTAAAAGTGAACCGTT+TGG | - | chr4.3:79296936-79296955 | None:intergenic | 35.0% | |
| TCACCCATTATTCTCTCAAA+CGG | - | chr4.3:79297536-79297555 | None:intergenic | 35.0% | |
| TGCATTTCTTGAACGGAATA+CGG | + | chr4.3:79297436-79297455 | MS.gene037665:CDS | 35.0% | |
| TTATCCGAATCCAAATACTC+TGG | - | chr4.3:79297851-79297870 | None:intergenic | 35.0% | |
| ! | AATCACACGGGTTGAATATT+CGG | - | chr4.3:79296989-79297008 | None:intergenic | 35.0% |
| ! | AGAGTATTTGGATTCGGATA+AGG | + | chr4.3:79297850-79297869 | MS.gene037665:CDS | 35.0% |
| ! | ATGCCGTTTGAGAGAATAAT+GGG | + | chr4.3:79297530-79297549 | MS.gene037665:CDS | 35.0% |
| ! | GCTACACATAGTTTTTCACA+AGG | + | chr4.3:79298001-79298020 | MS.gene037665:CDS | 35.0% |
| ! | TATGCCGTTTGAGAGAATAA+TGG | + | chr4.3:79297529-79297548 | MS.gene037665:CDS | 35.0% |
| ! | TCTGGTTCATTTCTTCCAAA+CGG | + | chr4.3:79296918-79296937 | MS.gene037665:CDS | 35.0% |
| !! | AACGGTTCACTTTTACAAAC+CGG | + | chr4.3:79296936-79296955 | MS.gene037665:CDS | 35.0% |
| !! | ATGGTATTTGCTGTTAACCA+AGG | + | chr4.3:79298136-79298155 | MS.gene037665:CDS | 35.0% |
| !! | GATATTGGAAGTGCCTAAAA+CGG | + | chr4.3:79297889-79297908 | MS.gene037665:CDS | 35.0% |
| !! | TGAGAGAATAATGGGTGATA+TGG | + | chr4.3:79297538-79297557 | MS.gene037665:CDS | 35.0% |
| !! | TGATTTTAACGAAAACCGTG+TGG | + | chr4.3:79297286-79297305 | MS.gene037665:CDS | 35.0% |
| !!! | ACAAGGTTTTGAAATGGGTT+CGG | + | chr4.3:79297613-79297632 | MS.gene037665:CDS | 35.0% |
| !!! | AGGTACACAAGGTTTTGAAA+TGG | + | chr4.3:79297607-79297626 | MS.gene037665:CDS | 35.0% |
| !!! | GGTACACAAGGTTTTGAAAT+GGG | + | chr4.3:79297608-79297627 | MS.gene037665:CDS | 35.0% |
| AACACGAAAAGGTTACCGTT+AGG | - | chr4.3:79297242-79297261 | None:intergenic | 40.0% | |
| ACTGAATGAGCGTAACAATC+CGG | - | chr4.3:79296834-79296853 | None:intergenic | 40.0% | |
| ATATCCTCCATTTCCCAAAC+CGG | - | chr4.3:79297512-79297531 | None:intergenic | 40.0% | |
| CGTGTTCGCAAACACAAAAT+CGG | + | chr4.3:79297256-79297275 | MS.gene037665:CDS | 40.0% | |
| TAAAAATCCTCACCGACACA+TGG | + | chr4.3:79296889-79296908 | MS.gene037665:CDS | 40.0% | |
| TCACCAGGTCGATATAAAAC+CGG | - | chr4.3:79297653-79297672 | None:intergenic | 40.0% | |
| TCTTCGGTTTCTTGCAGAAA+CGG | - | chr4.3:79297179-79297198 | None:intergenic | 40.0% | |
| TGAACGGAATACGGATATTG+CGG | + | chr4.3:79297445-79297464 | MS.gene037665:CDS | 40.0% | |
| TGTTACTGTTGTGTGCATTG+AGG | - | chr4.3:79296718-79296737 | None:intergenic | 40.0% | |
| TTAACGAAAACCGTGTGGTT+CGG | + | chr4.3:79297291-79297310 | MS.gene037665:CDS | 40.0% | |
| TTAGGCACTTCCAATATCTC+AGG | - | chr4.3:79297887-79297906 | None:intergenic | 40.0% | |
| TTGTGTTTGCGAACACGAAA+AGG | - | chr4.3:79297253-79297272 | None:intergenic | 40.0% | |
| TTTATATCGACCTGGTGAAC+CGG | + | chr4.3:79297655-79297674 | MS.gene037665:CDS | 40.0% | |
| ! | ACACCATACAACACCGTTTT+AGG | - | chr4.3:79297905-79297924 | None:intergenic | 40.0% |
| ! | AGAAGGTGAATTTTCCGATG+CGG | + | chr4.3:79297382-79297401 | MS.gene037665:CDS | 40.0% |
| ! | TTCGCCAGAGTATTTGGATT+CGG | + | chr4.3:79297844-79297863 | MS.gene037665:CDS | 40.0% |
| ! | TTTTACCCGAAACGCGAAAA+CGG | + | chr4.3:79297140-79297159 | MS.gene037665:CDS | 40.0% |
| ! | TTTTTCACAAGGTCAACGGT+TGG | + | chr4.3:79298012-79298031 | MS.gene037665:CDS | 40.0% |
| !! | AAAACGGTGTTGTATGGTGT+AGG | + | chr4.3:79297905-79297924 | MS.gene037665:CDS | 40.0% |
| !! | AAACGGTGTTGTATGGTGTA+GGG | + | chr4.3:79297906-79297925 | MS.gene037665:CDS | 40.0% |
| !! | AATCCGGTTTTATATCGACC+TGG | + | chr4.3:79297647-79297666 | MS.gene037665:CDS | 40.0% |
| !! | GTGTCGGTGAGGATTTTTAA+GGG | - | chr4.3:79296888-79296907 | None:intergenic | 40.0% |
| !! | TGTCGGTGAGGATTTTTAAG+GGG | - | chr4.3:79296887-79296906 | None:intergenic | 40.0% |
| !! | TGTGTCGGTGAGGATTTTTA+AGG | - | chr4.3:79296889-79296908 | None:intergenic | 40.0% |
| !! | TTCGACGGCAAATTTGTTAC+CGG | + | chr4.3:79297730-79297749 | MS.gene037665:CDS | 40.0% |
| !!! | ACGGTTCATGGTTTTGAATC+CGG | + | chr4.3:79297685-79297704 | MS.gene037665:CDS | 40.0% |
| !!! | AGCTTTTTCGCCAGAGTATT+TGG | + | chr4.3:79297838-79297857 | MS.gene037665:CDS | 40.0% |
| !!! | GGTTTTTTGGGAGGAGTTTA+CGG | - | chr4.3:79296788-79296807 | None:intergenic | 40.0% |
| !!! | GTTTTTTGGGAGGAGTTTAC+GGG | - | chr4.3:79296787-79296806 | None:intergenic | 40.0% |
| !!! | TGAACCGGCAATGGTTTTTT+GGG | - | chr4.3:79296800-79296819 | None:intergenic | 40.0% |
| AACGACGTCGAATTAAGCGA+AGG | + | chr4.3:79297038-79297057 | MS.gene037665:CDS | 45.0% | |
| ACAAACAACAACCACCGCAT+CGG | - | chr4.3:79297399-79297418 | None:intergenic | 45.0% | |
| ATAATTCCCACAACCGGCAA+AGG | - | chr4.3:79297953-79297972 | None:intergenic | 45.0% | |
| ATGAGCGTAACAATCCGGTT+TGG | - | chr4.3:79296829-79296848 | None:intergenic | 45.0% | |
| CCGGTTCACTAAAACCAAAC+CGG | + | chr4.3:79296812-79296831 | MS.gene037665:CDS | 45.0% | |
| CTCTTAGACCGAACCAACAT+CGG | + | chr4.3:79296756-79296775 | MS.gene037665:CDS | 45.0% | |
| GATGGTTCCGTCATCATCAT+CGG | + | chr4.3:79297092-79297111 | MS.gene037665:CDS | 45.0% | |
| GCCGAGACTTTATCATTCGA+CGG | + | chr4.3:79297715-79297734 | MS.gene037665:CDS | 45.0% | |
| GCCGTCGAATGATAAAGTCT+CGG | - | chr4.3:79297719-79297738 | None:intergenic | 45.0% | |
| GCTAGTAAAACACGTCCATC+CGG | - | chr4.3:79297752-79297771 | None:intergenic | 45.0% | |
| TAACGAAAACCGTGTGGTTC+GGG | + | chr4.3:79297292-79297311 | MS.gene037665:CDS | 45.0% | |
| TATCCTCCATTTCCCAAACC+GGG | - | chr4.3:79297511-79297530 | None:intergenic | 45.0% | |
| TCCTCCCAAAAAACCATTGC+CGG | + | chr4.3:79296793-79296812 | MS.gene037665:CDS | 45.0% | |
| TCGAATTAAGCGAAGGTCGT+TGG | + | chr4.3:79297045-79297064 | MS.gene037665:CDS | 45.0% | |
| TGTATCCAATGTGCCACACT+TGG | - | chr4.3:79298166-79298185 | None:intergenic | 45.0% | |
| TTCAACCCGTGTGATTCAAC+CGG | + | chr4.3:79296993-79297012 | MS.gene037665:CDS | 45.0% | |
| TTCGGATCCGTGTTTGAATC+CGG | + | chr4.3:79297631-79297650 | MS.gene037665:CDS | 45.0% | |
| ! | GATGGACGTGTTTTACTAGC+GGG | + | chr4.3:79297752-79297771 | MS.gene037665:CDS | 45.0% |
| ! | GGAGCTATGAAAGGTACACA+AGG | + | chr4.3:79297596-79297615 | MS.gene037665:CDS | 45.0% |
| ! | GGATGGACGTGTTTTACTAG+CGG | + | chr4.3:79297751-79297770 | MS.gene037665:CDS | 45.0% |
| ! | GTCAACGGTTGGTCAAACTT+GGG | + | chr4.3:79298023-79298042 | MS.gene037665:CDS | 45.0% |
| ! | TCAACGGTTGGTCAAACTTG+GGG | + | chr4.3:79298024-79298043 | MS.gene037665:CDS | 45.0% |
| ! | TCTTCCACCGATGATGATGA+CGG | - | chr4.3:79297102-79297121 | None:intergenic | 45.0% |
| !! | ACGGCAAATTTGTTACCGGA+TGG | + | chr4.3:79297734-79297753 | MS.gene037665:CDS | 45.0% |
| !! | ATGATGATGACGGAACCATC+TGG | - | chr4.3:79297092-79297111 | None:intergenic | 45.0% |
| !! | GGTTCACTTTTACAAACCGG+TGG | + | chr4.3:79296939-79296958 | MS.gene037665:CDS | 45.0% |
| !! | GTGCCTAAAACGGTGTTGTA+TGG | + | chr4.3:79297899-79297918 | MS.gene037665:CDS | 45.0% |
| !!! | CCGGTTTGGTTTTAGTGAAC+CGG | - | chr4.3:79296815-79296834 | None:intergenic | 45.0% |
| !!! | CGGTTCATGGTTTTGAATCC+GGG | + | chr4.3:79297686-79297705 | MS.gene037665:CDS | 45.0% |
| !!! | GGCGGAGTTGGTTTTTTATG+GGG | - | chr4.3:79296866-79296885 | None:intergenic | 45.0% |
| !!! | GGGCGGAGTTGGTTTTTTAT+GGG | - | chr4.3:79296867-79296886 | None:intergenic | 45.0% |
| !!! | GGTTTTTTATGGGGTCGAAG+AGG | - | chr4.3:79296857-79296876 | None:intergenic | 45.0% |
| !!! | GTGAACCGGCAATGGTTTTT+TGG | - | chr4.3:79296801-79296820 | None:intergenic | 45.0% |
| !!! | TGGTTTTAGTGAACCGGCAA+TGG | - | chr4.3:79296809-79296828 | None:intergenic | 45.0% |
| AAACCGGTGGTGACTTAGAC+GGG | + | chr4.3:79296952-79296971 | MS.gene037665:CDS | 50.0% | |
| AATACGGATATTGCGGCGCA+TGG | + | chr4.3:79297452-79297471 | MS.gene037665:CDS | 50.0% | |
| ACCATGAACCGTAACCCAAC+CGG | - | chr4.3:79297677-79297696 | None:intergenic | 50.0% | |
| ACTTGGGGTTAACTCTGCGA+TGG | + | chr4.3:79298039-79298058 | MS.gene037665:CDS | 50.0% | |
| ATACGGATATTGCGGCGCAT+GGG | + | chr4.3:79297453-79297472 | MS.gene037665:CDS | 50.0% | |
| ATGACCCGGTTGAATCACAC+GGG | - | chr4.3:79297001-79297020 | None:intergenic | 50.0% | |
| ATTCAACCGGGTCATGCGAT+TGG | + | chr4.3:79297006-79297025 | MS.gene037665:CDS | 50.0% | |
| CAAACCGGTGGTGACTTAGA+CGG | + | chr4.3:79296951-79296970 | MS.gene037665:CDS | 50.0% | |
| CATGACCCGGTTGAATCACA+CGG | - | chr4.3:79297002-79297021 | None:intergenic | 50.0% | |
| GAGCTTCTAGTCCAAAACGC+AGG | + | chr4.3:79296687-79296706 | MS.gene037665:CDS | 50.0% | |
| GAGGTGGAGGATTCGATGTA+TGG | + | chr4.3:79298075-79298094 | MS.gene037665:CDS | 50.0% | |
| GTCATCATCATCGGTGGAAG+AGG | + | chr4.3:79297101-79297120 | MS.gene037665:CDS | 50.0% | |
| GTTAACTCTGCGATGGTCGA+TGG | + | chr4.3:79298046-79298065 | MS.gene037665:CDS | 50.0% | |
| GTTTGTGGCGGTGCTCAATA+CGG | + | chr4.3:79297413-79297432 | MS.gene037665:CDS | 50.0% | |
| TAAAGTCTCGGCACAGTACC+CGG | - | chr4.3:79297707-79297726 | None:intergenic | 50.0% | |
| TAACCAAGGTGTGCCAAGTG+TGG | + | chr4.3:79298150-79298169 | MS.gene037665:CDS | 50.0% | |
| TCAACCCGTGTGATTCAACC+GGG | + | chr4.3:79296994-79297013 | MS.gene037665:CDS | 50.0% | |
| TCGGGTTTACCCGGAGTTAA+CGG | + | chr4.3:79297310-79297329 | MS.gene037665:CDS | 50.0% | |
| TGCGCCGCCAGGTTATTATA+TGG | + | chr4.3:79298117-79298136 | MS.gene037665:CDS | 50.0% | |
| TGGACCGAGGAATTATCCGT+CGG | + | chr4.3:79297334-79297353 | MS.gene037665:CDS | 50.0% | |
| TGTTGTGAGTGTGCCTTTGC+CGG | + | chr4.3:79297937-79297956 | MS.gene037665:CDS | 50.0% | |
| TTCAACCGGGTCATGCGATT+GGG | + | chr4.3:79297007-79297026 | MS.gene037665:CDS | 50.0% | |
| TTGTGGGCGGATATTAGCGA+CGG | + | chr4.3:79297478-79297497 | MS.gene037665:CDS | 50.0% | |
| TTTGGGAGGAGTTTACGGGT+TGG | - | chr4.3:79296783-79296802 | None:intergenic | 50.0% | |
| ! | ACGACACCGTTTTCGCGTTT+CGG | - | chr4.3:79297149-79297168 | None:intergenic | 50.0% |
| ! | AGGTGAATTTTCCGATGCGG+TGG | + | chr4.3:79297385-79297404 | MS.gene037665:CDS | 50.0% |
| ! | GGTCAACGGTTGGTCAAACT+TGG | + | chr4.3:79298022-79298041 | MS.gene037665:CDS | 50.0% |
| ! | TTGAGGCTATGCCTGCGTTT+TGG | - | chr4.3:79296701-79296720 | None:intergenic | 50.0% |
| !! | ACCAGAAGAGCACCATGTGT+CGG | - | chr4.3:79296904-79296923 | None:intergenic | 50.0% |
| !! | CGATGTTGGTTCGGTCTAAG+AGG | - | chr4.3:79296758-79296777 | None:intergenic | 50.0% |
| !! | CGGTGAGGATTTTTAAGGGG+CGG | - | chr4.3:79296884-79296903 | None:intergenic | 50.0% |
| !! | GATGCGGTGGTTGTTGTTTG+TGG | + | chr4.3:79297398-79297417 | MS.gene037665:CDS | 50.0% |
| !! | GGATTTTTAAGGGGCGGAGT+TGG | - | chr4.3:79296878-79296897 | None:intergenic | 50.0% |
| !! | TCGGTGATGCTGGCTTTAGA+AGG | + | chr4.3:79297365-79297384 | MS.gene037665:CDS | 50.0% |
| !! | TTTACGGGTTGGACCGATGT+TGG | - | chr4.3:79296772-79296791 | None:intergenic | 50.0% |
| !!! | ACCGGCAATGGTTTTTTGGG+AGG | - | chr4.3:79296797-79296816 | None:intergenic | 50.0% |
| !!! | AGTGTGGCACGTGCTGATTT+TGG | - | chr4.3:79296654-79296673 | None:intergenic | 50.0% |
| !!! | GGGGCGGAGTTGGTTTTTTA+TGG | - | chr4.3:79296868-79296887 | None:intergenic | 50.0% |
| !!! | GTGTGGCACGTGCTGATTTT+GGG | - | chr4.3:79296653-79296672 | None:intergenic | 50.0% |
| ACCGACACATGGTGCTCTTC+TGG | + | chr4.3:79296900-79296919 | MS.gene037665:CDS | 55.0% | |
| ACCGAGGAATTATCCGTCGG+CGG | + | chr4.3:79297337-79297356 | MS.gene037665:CDS | 55.0% | |
| ACCGGTTGGGTTACGGTTCA+TGG | + | chr4.3:79297673-79297692 | MS.gene037665:CDS | 55.0% | |
| ATCGACCTGGTGAACCGGTT+GGG | + | chr4.3:79297660-79297679 | MS.gene037665:CDS | 55.0% | |
| CGGGTTTACCCGGAGTTAAC+GGG | + | chr4.3:79297311-79297330 | MS.gene037665:CDS | 55.0% | |
| CTCCATTTCCCAAACCGGGT+CGG | - | chr4.3:79297507-79297526 | None:intergenic | 55.0% | |
| CTCTTCCCAATCGCATGACC+CGG | - | chr4.3:79297015-79297034 | None:intergenic | 55.0% | |
| CTGCGATGGTCGATGGTGAT+GGG | + | chr4.3:79298053-79298072 | MS.gene037665:CDS | 55.0% | |
| CTGGTGAACCGGTTGGGTTA+CGG | + | chr4.3:79297666-79297685 | MS.gene037665:CDS | 55.0% | |
| GAACCCGTCTAAGTCACCAC+CGG | - | chr4.3:79296958-79296977 | None:intergenic | 55.0% | |
| GGTTCCGTCATCATCATCGG+TGG | + | chr4.3:79297095-79297114 | MS.gene037665:CDS | 55.0% | |
| GTGTGCCAAGTGTGGCACAT+TGG | + | chr4.3:79298158-79298177 | MS.gene037665:CDS | 55.0% | |
| GTTTACCCGGAGTTAACGGG+TGG | + | chr4.3:79297314-79297333 | MS.gene037665:CDS | 55.0% | |
| TATCGACCTGGTGAACCGGT+TGG | + | chr4.3:79297659-79297678 | MS.gene037665:CDS | 55.0% | |
| TCTGCGATGGTCGATGGTGA+TGG | + | chr4.3:79298052-79298071 | MS.gene037665:CDS | 55.0% | |
| TGTGGGCGGATATTAGCGAC+GGG | + | chr4.3:79297479-79297498 | MS.gene037665:CDS | 55.0% | |
| TTATCCGTCGGCGGGTAGTT+CGG | + | chr4.3:79297346-79297365 | MS.gene037665:CDS | 55.0% | |
| ! | AGTGTGCCTTTGCCGGTTGT+GGG | + | chr4.3:79297944-79297963 | MS.gene037665:CDS | 55.0% |
| ! | CGACACCGTTTTCGCGTTTC+GGG | - | chr4.3:79297148-79297167 | None:intergenic | 55.0% |
| ! | GGGTTGGACCGATGTTGGTT+CGG | - | chr4.3:79296767-79296786 | None:intergenic | 55.0% |
| !! | AAGAGCACCATGTGTCGGTG+AGG | - | chr4.3:79296899-79296918 | None:intergenic | 55.0% |
| !! | ATCCGACCCGGTTTGGGAAA+TGG | + | chr4.3:79297502-79297521 | MS.gene037665:CDS | 55.0% |
| !! | GCGGTGGTTGTTGTTTGTGG+CGG | + | chr4.3:79297401-79297420 | MS.gene037665:CDS | 55.0% |
| ACTAGAAGCTCCCACGTGCC+GGG | - | chr4.3:79296678-79296697 | None:intergenic | 60.0% | |
| ATCACCGAACTACCCGCCGA+CGG | - | chr4.3:79297353-79297372 | None:intergenic | 60.0% | |
| ATTAGCGACGGGATCCGACC+CGG | + | chr4.3:79297490-79297509 | MS.gene037665:CDS | 60.0% | |
| ATTGCGGCGCATGGGAGTTG+TGG | + | chr4.3:79297461-79297480 | MS.gene037665:CDS | 60.0% | |
| CCCGCCGACGGATAATTCCT+CGG | - | chr4.3:79297341-79297360 | None:intergenic | 60.0% | |
| CCGAGGAATTATCCGTCGGC+GGG | + | chr4.3:79297338-79297357 | MS.gene037665:CDS | 60.0% | |
| CCGGGTAAACCCGAACCACA+CGG | - | chr4.3:79297304-79297323 | None:intergenic | 60.0% | |
| CTCGGTCCACCCGTTAACTC+CGG | - | chr4.3:79297323-79297342 | None:intergenic | 60.0% | |
| GACTAGAAGCTCCCACGTGC+CGG | - | chr4.3:79296679-79296698 | None:intergenic | 60.0% | |
| GTGCCACACTTGGCACACCT+TGG | - | chr4.3:79298156-79298175 | None:intergenic | 60.0% | |
| TCGGTCCACCCGTTAACTCC+GGG | - | chr4.3:79297322-79297341 | None:intergenic | 60.0% | |
| TTGCGGCGCATGGGAGTTGT+GGG | + | chr4.3:79297462-79297481 | MS.gene037665:CDS | 60.0% | |
| ! | CCGTGTGGTTCGGGTTTACC+CGG | + | chr4.3:79297301-79297320 | MS.gene037665:CDS | 60.0% |
| ! | CGTAACCCAACCGGTTCACC+AGG | - | chr4.3:79297668-79297687 | None:intergenic | 60.0% |
| ! | GAGTGTGCCTTTGCCGGTTG+TGG | + | chr4.3:79297943-79297962 | MS.gene037665:CDS | 60.0% |
| !! | CGACCCGGTTTGGGAAATGG+AGG | + | chr4.3:79297505-79297524 | MS.gene037665:CDS | 60.0% |
| !! | CGATGGTCGATGGTGATGGG+AGG | + | chr4.3:79298056-79298075 | MS.gene037665:CDS | 60.0% |
| !! | TCGATGGTGATGGGAGGTGG+AGG | + | chr4.3:79298062-79298081 | MS.gene037665:CDS | 60.0% |
| !! | TGGTCGATGGTGATGGGAGG+TGG | + | chr4.3:79298059-79298078 | MS.gene037665:CDS | 60.0% |
| CGATGTATGGCCCCGCCAAG+CGG | + | chr4.3:79298088-79298107 | MS.gene037665:CDS | 65.0% | |
| CTAGAAGCTCCCACGTGCCG+GGG | - | chr4.3:79296677-79296696 | None:intergenic | 65.0% | |
| GACGGGATCCGACCCGGTTT+GGG | + | chr4.3:79297496-79297515 | MS.gene037665:CDS | 65.0% | |
| TCAGCACGTGCCACACTCCC+CGG | + | chr4.3:79296657-79296676 | MS.gene037665:CDS | 65.0% | |
| ! | CGGAGTTAACGGGTGGACCG+AGG | + | chr4.3:79297321-79297340 | MS.gene037665:CDS | 65.0% |
| ! | GGCGGGTAGTTCGGTGATGC+TGG | + | chr4.3:79297355-79297374 | MS.gene037665:CDS | 65.0% |
| CGACGGGATCCGACCCGGTT+TGG | + | chr4.3:79297495-79297514 | MS.gene037665:CDS | 70.0% | |
| CGGCGCATGGGAGTTGTGGG+CGG | + | chr4.3:79297465-79297484 | MS.gene037665:CDS | 70.0% | |
| TGCCACACTCCCCGGCACGT+GGG | + | chr4.3:79296665-79296684 | MS.gene037665:CDS | 70.0% | |
| CGCAACCACGCCGCTTGGCG+GGG | - | chr4.3:79298101-79298120 | None:intergenic | 75.0% | |
| CTCCCACGTGCCGGGGAGTG+TGG | - | chr4.3:79296670-79296689 | None:intergenic | 75.0% | |
| GCGCAACCACGCCGCTTGGC+GGG | - | chr4.3:79298102-79298121 | None:intergenic | 75.0% | |
| GGCGCAACCACGCCGCTTGG+CGG | - | chr4.3:79298103-79298122 | None:intergenic | 75.0% | |
| GTGCCACACTCCCCGGCACG+TGG | + | chr4.3:79296664-79296683 | MS.gene037665:CDS | 75.0% | |
| TATGGCCCCGCCAAGCGGCG+TGG | + | chr4.3:79298093-79298112 | MS.gene037665:CDS | 75.0% | |
| ! | AGCGGCGTGGTTGCGCCGCC+AGG | + | chr4.3:79298106-79298125 | MS.gene037665:CDS | 80.0% |
| ! | GGCGGCGCAACCACGCCGCT+TGG | - | chr4.3:79298106-79298125 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 79296597 | 79298195 | 79296597 | ID=MS.gene037665 |
| chr4.3 | mRNA | 79296597 | 79298195 | 79296597 | ID=MS.gene037665.t1;Parent=MS.gene037665 |
| chr4.3 | exon | 79296597 | 79298195 | 79296597 | ID=MS.gene037665.t1.exon1;Parent=MS.gene037665.t1 |
| chr4.3 | CDS | 79296597 | 79298195 | 79296597 | ID=cds.MS.gene037665.t1;Parent=MS.gene037665.t1 |
| Gene Sequence |
| Protein sequence |
