Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene63972.t1 | XP_003589379.1 | 96.3 | 515 | 18 | 1 | 30 | 544 | 30 | 543 | 3.60E-298 | 1033.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene63972.t1 | Q9FYG4 | 48.1 | 522 | 262 | 8 | 30 | 544 | 96 | 615 | 8.1e-134 | 478.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene63972.t1 | G7I5Z0 | 96.3 | 515 | 18 | 1 | 30 | 544 | 30 | 543 | 2.6e-298 | 1033.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene052142 | MS.gene63972 | 0.801564 | 8.49E-49 | -1.69E-46 |
| MS.gene052187 | MS.gene63972 | 0.805253 | 1.46E-49 | -1.69E-46 |
| MS.gene053074 | MS.gene63972 | 0.845311 | 4.40E-59 | -1.69E-46 |
| MS.gene058168 | MS.gene63972 | 0.812484 | 4.14E-51 | -1.69E-46 |
| MS.gene059006 | MS.gene63972 | 0.837363 | 5.43E-57 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene63972 | MS.gene050500 | PPI |
| MS.gene048092 | MS.gene63972 | PPI |
| MS.gene63972 | MS.gene92577 | PPI |
| MS.gene63972 | MS.gene037665 | PPI |
| MS.gene63972 | MS.gene73248 | PPI |
| MS.gene024604 | MS.gene63972 | PPI |
| MS.gene22907 | MS.gene63972 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene63972.t1 | MTR_1g023570 | 95.764 | 543 | 21 | 2 | 3 | 544 | 2 | 543 | 0.0 | 1041 |
| MS.gene63972.t1 | MTR_3g113210 | 71.023 | 528 | 143 | 5 | 26 | 544 | 29 | 555 | 0.0 | 797 |
| MS.gene63972.t1 | MTR_6g004960 | 72.868 | 516 | 135 | 3 | 34 | 544 | 1 | 516 | 0.0 | 794 |
| MS.gene63972.t1 | MTR_7g114530 | 57.634 | 524 | 211 | 5 | 30 | 544 | 49 | 570 | 0.0 | 615 |
| MS.gene63972.t1 | MTR_5g038410 | 49.165 | 539 | 231 | 12 | 44 | 543 | 1 | 535 | 3.19e-179 | 516 |
| MS.gene63972.t1 | MTR_8g102900 | 44.423 | 529 | 279 | 12 | 26 | 543 | 108 | 632 | 1.49e-151 | 448 |
| MS.gene63972.t1 | MTR_4g019520 | 45.185 | 540 | 277 | 11 | 9 | 543 | 6 | 531 | 3.32e-148 | 436 |
| MS.gene63972.t1 | MTR_6g088300 | 43.657 | 536 | 277 | 14 | 28 | 543 | 54 | 584 | 5.74e-144 | 427 |
| MS.gene63972.t1 | MTR_3g075520 | 43.969 | 514 | 268 | 10 | 44 | 543 | 1 | 508 | 8.79e-144 | 424 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene63972.t1 | AT1G75620 | 61.850 | 519 | 186 | 6 | 30 | 543 | 35 | 546 | 0.0 | 663 |
| MS.gene63972.t1 | AT1G19900 | 59.309 | 521 | 207 | 4 | 27 | 543 | 28 | 547 | 0.0 | 658 |
| MS.gene63972.t1 | AT3G57620 | 51.560 | 545 | 242 | 6 | 14 | 543 | 9 | 546 | 0.0 | 587 |
| MS.gene63972.t1 | AT1G14430 | 50.361 | 554 | 251 | 8 | 7 | 543 | 18 | 564 | 0.0 | 551 |
| MS.gene63972.t1 | AT5G19580 | 46.667 | 525 | 265 | 10 | 29 | 544 | 76 | 594 | 8.77e-164 | 478 |
| MS.gene63972.t1 | AT1G67290 | 48.084 | 522 | 262 | 8 | 30 | 544 | 96 | 615 | 6.03e-162 | 474 |
| MS.gene63972.t1 | AT3G53950 | 44.952 | 525 | 265 | 12 | 30 | 544 | 34 | 544 | 1.81e-146 | 432 |
Find 155 sgRNAs with CRISPR-Local
Find 191 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTATCATTCCACTGCAATTT+TGG | 0.154597 | 1.4:-1250520 | MS.gene63972:CDS |
| AGCAACATTGGATAAGAATT+TGG | 0.214373 | 1.4:-1250289 | MS.gene63972:CDS |
| TCCACAACCCATGTTGGATT+TGG | 0.222957 | 1.4:+1250741 | None:intergenic |
| AAATTCCTAGTGAAGGAATT+TGG | 0.231449 | 1.4:-1250080 | MS.gene63972:CDS |
| ATAATTAATGGAGCGGGTTC+GGG | 0.268444 | 1.4:-1250657 | MS.gene63972:CDS |
| GATAATTAATGGAGCGGGTT+CGG | 0.293058 | 1.4:-1250658 | MS.gene63972:CDS |
| GTGATTGTTGTTATGAGAAT+TGG | 0.326429 | 1.4:+1252065 | None:intergenic |
| CCACAACCCATGTTGGATTT+GGG | 0.333106 | 1.4:+1250742 | None:intergenic |
| GCATCAAGGCGTGAGTTTCT+TGG | 0.335410 | 1.4:-1250801 | MS.gene63972:CDS |
| TCACCTATTCTTGCACCTCC+TGG | 0.339464 | 1.4:-1250132 | MS.gene63972:CDS |
| ATAAAATTGTAACCAATATG+AGG | 0.355050 | 1.4:+1250462 | None:intergenic |
| AACCGATTGCACGGCTCATT+CGG | 0.355271 | 1.4:-1251850 | MS.gene63972:CDS |
| CACCAACAACCTCTGATTCA+TGG | 0.367118 | 1.4:+1250221 | None:intergenic |
| GACACTTTCCGTTGGGTAAA+GGG | 0.373285 | 1.4:+1251901 | None:intergenic |
| GGGACAGCAGGGTGGGAATA+CGG | 0.374378 | 1.4:-1250636 | MS.gene63972:CDS |
| TAAAGAACCGGATTTAGAAC+TGG | 0.381761 | 1.4:+1250606 | None:intergenic |
| TACAAAACTAATAACATAAT+CGG | 0.382381 | 1.4:-1250585 | MS.gene63972:CDS |
| CGTGATGGTAGGGTTCTTGT+TGG | 0.385112 | 1.4:-1250495 | MS.gene63972:CDS |
| GGAGCGGGTTCGGGGACAGC+AGG | 0.386297 | 1.4:-1250648 | MS.gene63972:CDS |
| ACTGACGTTTGGTGTTCTTC+CGG | 0.387753 | 1.4:-1251780 | MS.gene63972:CDS |
| AGTTATCCAAGCTCAGGTTC+AGG | 0.393608 | 1.4:-1250915 | MS.gene63972:CDS |
| TGGAAGAAGGAAGAGGAGAT+AGG | 0.394304 | 1.4:+1252085 | None:intergenic |
| GAAAATGAGTGTGTGTTAAA+AGG | 0.395788 | 1.4:+1250243 | None:intergenic |
| CCATCTTTGGTAGCCGCAGC+TGG | 0.403295 | 1.4:-1252035 | MS.gene63972:CDS |
| ATGCCTAGGGCTAGAGTAAT+GGG | 0.418773 | 1.4:-1250714 | MS.gene63972:CDS |
| GGTGGTAGCAACCCTCATAT+TGG | 0.419674 | 1.4:-1250474 | MS.gene63972:CDS |
| AATCACCACCACCCCATCTT+TGG | 0.419887 | 1.4:-1252048 | MS.gene63972:CDS |
| GGACAGCAGGGTGGGAATAC+GGG | 0.420291 | 1.4:-1250635 | MS.gene63972:CDS |
| CCAGCTGCGGCTACCAAAGA+TGG | 0.424781 | 1.4:+1252035 | None:intergenic |
| GTCTGGACAAGTGTTCCTTT+AGG | 0.436088 | 1.4:+1251747 | None:intergenic |
| TTTGATTGTAGATTCTTCAA+TGG | 0.436753 | 1.4:+1250882 | None:intergenic |
| CGTTTGGTGTTCTTCCGGTT+CGG | 0.443827 | 1.4:-1251775 | MS.gene63972:CDS |
| ATATTTGATCGTACTGACTT+TGG | 0.444418 | 1.4:-1251936 | MS.gene63972:CDS |
| GGGTCCCCACCTGGGATTTG+AGG | 0.445198 | 1.4:+1250942 | None:intergenic |
| AAGGATTGTGGCTTCTACTT+CGG | 0.446379 | 1.4:-1250358 | MS.gene63972:CDS |
| CGACACTTTCCGTTGGGTAA+AGG | 0.450947 | 1.4:+1251900 | None:intergenic |
| CATCGTTGTAGCCACCGGTC+TGG | 0.451241 | 1.4:+1251730 | None:intergenic |
| GACGGACGTCAGATTATCAT+TGG | 0.452067 | 1.4:-1251600 | MS.gene63972:CDS |
| GCAAAAGCACGGTCAAAAGT+TGG | 0.456115 | 1.4:-1250331 | MS.gene63972:CDS |
| GCTTCGATACTAAGTTCAGT+TGG | 0.459077 | 1.4:+1250426 | None:intergenic |
| GAAGTAGAAGCCACAATCCT+TGG | 0.461659 | 1.4:+1250360 | None:intergenic |
| CCCAAATCCAACATGGGTTG+TGG | 0.465400 | 1.4:-1250742 | MS.gene63972:CDS |
| ATGATAATCTGACGTCCGTC+GGG | 0.466571 | 1.4:+1251603 | None:intergenic |
| CAAAAGCACGGTCAAAAGTT+GGG | 0.467287 | 1.4:-1250330 | MS.gene63972:CDS |
| CCTGAGCTTGGATAACTCCT+AGG | 0.467424 | 1.4:+1250921 | None:intergenic |
| TCCGTTGGGTAAAGGGAGCT+TGG | 0.468205 | 1.4:+1251908 | None:intergenic |
| TTGTAACAATTGTGATTGGC+AGG | 0.468700 | 1.4:-1251679 | MS.gene63972:CDS |
| GAGGAGATAGGTGGTGGTGG+TGG | 0.471284 | 1.4:+1252097 | None:intergenic |
| GACCGAATGAGCCGTGCAAT+CGG | 0.472666 | 1.4:+1251848 | None:intergenic |
| TGTGATTGGCAGGAATTTGA+CGG | 0.477752 | 1.4:-1251669 | MS.gene63972:CDS |
| GTTATCCAAGCTCAGGTTCA+GGG | 0.478365 | 1.4:-1250914 | MS.gene63972:CDS |
| TCCGGTTCGGTGAATCCTAA+AGG | 0.479007 | 1.4:-1251762 | MS.gene63972:CDS |
| AAATCCCAGGTGGGGACCCT+AGG | 0.479903 | 1.4:-1250938 | MS.gene63972:CDS |
| CGGGTTCGGGGACAGCAGGG+TGG | 0.481834 | 1.4:-1250644 | MS.gene63972:CDS |
| CATGCCTAGGGCTAGAGTAA+TGG | 0.483226 | 1.4:-1250715 | MS.gene63972:CDS |
| AATCCAGGAGGTGCAAGAAT+AGG | 0.486846 | 1.4:+1250129 | None:intergenic |
| AAACAAAGTGAATAATGTGC+AGG | 0.487243 | 1.4:-1250190 | MS.gene63972:CDS |
| TAACTCCTAGGGTCCCCACC+TGG | 0.487338 | 1.4:+1250933 | None:intergenic |
| TGATATTGAGGTTACTATGC+CGG | 0.487729 | 1.4:-1250157 | MS.gene63972:CDS |
| TGTTTGTTCAAACTGACGTT+TGG | 0.489066 | 1.4:-1251791 | MS.gene63972:CDS |
| CAGCTGCGGCTACCAAAGAT+GGG | 0.491660 | 1.4:+1252036 | None:intergenic |
| TTTGGTATATGTTACGATGT+TGG | 0.495056 | 1.4:-1250271 | MS.gene63972:CDS |
| ATTATCAAAACGTCCCCACT+TGG | 0.495267 | 1.4:+1250675 | None:intergenic |
| GTCTCCATCGTTGTAGCCAC+CGG | 0.495723 | 1.4:+1251725 | None:intergenic |
| TCCTTTAGGATTCACCGAAC+CGG | 0.496066 | 1.4:+1251761 | None:intergenic |
| AAGGAAGAGGAGATAGGTGG+TGG | 0.499045 | 1.4:+1252091 | None:intergenic |
| GGGTTCGGGGACAGCAGGGT+GGG | 0.499402 | 1.4:-1250643 | MS.gene63972:CDS |
| CTTCGATACTAAGTTCAGTT+GGG | 0.500695 | 1.4:+1250427 | None:intergenic |
| ATACTTGTAACAATTGTGAT+TGG | 0.501433 | 1.4:-1251683 | MS.gene63972:CDS |
| AGTACCCCTGAACCTGAGCT+TGG | 0.503306 | 1.4:+1250909 | None:intergenic |
| ACGGACGTCAGATTATCATT+GGG | 0.504627 | 1.4:-1251599 | MS.gene63972:CDS |
| TCATGACGACACTTTCCGTT+GGG | 0.507837 | 1.4:+1251894 | None:intergenic |
| ATTTGTGGTGGAGCTCCAAA+AGG | 0.507956 | 1.4:-1250837 | MS.gene63972:CDS |
| TGAGAATTGGAAGAAGGAAG+AGG | 0.508192 | 1.4:+1252078 | None:intergenic |
| CATTCGCGAAGCGAGGTTCA+AGG | 0.515507 | 1.4:+1250388 | None:intergenic |
| TCCGTCGGGCAGAATATGAT+TGG | 0.521952 | 1.4:+1251617 | None:intergenic |
| TGTATCCAAATTCCTTCACT+AGG | 0.522963 | 1.4:+1250075 | None:intergenic |
| TATCAAACATACGAATGGTT+CGG | 0.523167 | 1.4:+1251703 | None:intergenic |
| TATCCTCTTTGACTATACTA+AGG | 0.523749 | 1.4:-1251409 | MS.gene63972:intron |
| TTCCATGAATCAGAGGTTGT+TGG | 0.524137 | 1.4:-1250223 | MS.gene63972:CDS |
| TTGTTATGAGAATTGGAAGA+AGG | 0.524866 | 1.4:+1252072 | None:intergenic |
| GAAGAGGAGATAGGTGGTGG+TGG | 0.525822 | 1.4:+1252094 | None:intergenic |
| GAATGTTCGTCCAAGGATTG+TGG | 0.526224 | 1.4:-1250370 | MS.gene63972:CDS |
| ATCAAAGTTTATACAAGCTG+AGG | 0.526362 | 1.4:-1250865 | MS.gene63972:CDS |
| ATTTCAAGTAAAAGCAACAT+TGG | 0.531009 | 1.4:-1250301 | MS.gene63972:CDS |
| AAGCGAGGTTCAAGGTAAGA+AGG | 0.532513 | 1.4:+1250396 | None:intergenic |
| GCGGACTTGCTGCTCGGAGA+TGG | 0.534369 | 1.4:-1251647 | MS.gene63972:CDS |
| GATATTGAGGTTACTATGCC+GGG | 0.535099 | 1.4:-1250156 | MS.gene63972:CDS |
| CAGACCGGTGGCTACAACGA+TGG | 0.536809 | 1.4:-1251729 | MS.gene63972:CDS |
| GAATCAGAGGTTGTTGGTGT+TGG | 0.537446 | 1.4:-1250217 | MS.gene63972:CDS |
| CCTAGGAGTTATCCAAGCTC+AGG | 0.540194 | 1.4:-1250921 | MS.gene63972:CDS |
| AACTCCTAGGGTCCCCACCT+GGG | 0.542708 | 1.4:+1250934 | None:intergenic |
| GTCATGACGACACTTTCCGT+TGG | 0.543988 | 1.4:+1251893 | None:intergenic |
| GCGAGACCCAGTTCTAAATC+CGG | 0.547300 | 1.4:-1250613 | MS.gene63972:CDS |
| AAACAATGGACGAAAAGTGT+TGG | 0.550011 | 1.4:+1251809 | None:intergenic |
| GGGAACAACATATGATATTG+AGG | 0.552074 | 1.4:-1250169 | MS.gene63972:CDS |
| TGTTGTTAGCAAAGATGAAG+AGG | 0.554181 | 1.4:+1251436 | None:intergenic |
| TACATTCGAGGCGTATGAGA+TGG | 0.557294 | 1.4:+1250540 | None:intergenic |
| TTGACGGCGGACTTGCTGCT+CGG | 0.557612 | 1.4:-1251653 | MS.gene63972:CDS |
| CTACCTTAGTATAGTCAAAG+AGG | 0.562748 | 1.4:+1251406 | None:intergenic |
| ACAAATAGCAGATAAAATCC+AGG | 0.565016 | 1.4:+1250114 | None:intergenic |
| AACCCATGTTGGATTTGGGT+CGG | 0.566702 | 1.4:+1250746 | None:intergenic |
| TAAAATTGTAACCAATATGA+GGG | 0.567574 | 1.4:+1250463 | None:intergenic |
| AAAGAACCGGATTTAGAACT+GGG | 0.569963 | 1.4:+1250607 | None:intergenic |
| TTGGAACAGACTAATGATGC+TGG | 0.570563 | 1.4:-1251507 | MS.gene63972:CDS |
| CATAAAGAAATTCCTAGTGA+AGG | 0.570695 | 1.4:-1250087 | MS.gene63972:CDS |
| CACCGTTAAAACCGATTGCA+CGG | 0.572292 | 1.4:-1251859 | MS.gene63972:CDS |
| TCACCCATTACTCTAGCCCT+AGG | 0.572852 | 1.4:+1250711 | None:intergenic |
| GCTTCGCGAATGTTCGTCCA+AGG | 0.576507 | 1.4:-1250377 | MS.gene63972:CDS |
| GATGGTAGGGTTCTTGTTGG+TGG | 0.579283 | 1.4:-1250492 | MS.gene63972:CDS |
| AATGATAATCTGACGTCCGT+CGG | 0.588364 | 1.4:+1251602 | None:intergenic |
| TAATTAATGGAGCGGGTTCG+GGG | 0.591461 | 1.4:-1250656 | MS.gene63972:CDS |
| GGCTACCAAAGATGGGGTGG+TGG | 0.592290 | 1.4:+1252043 | None:intergenic |
| GGCTAGAGTAATGGGTGACA+TGG | 0.592897 | 1.4:-1250706 | MS.gene63972:CDS |
| GGGTTGTGGAGACCATGCCT+AGG | 0.592998 | 1.4:-1250728 | MS.gene63972:CDS |
| GAGCGGGTTCGGGGACAGCA+GGG | 0.594837 | 1.4:-1250647 | MS.gene63972:CDS |
| TAACCGACCCAAATCCAACA+TGG | 0.597315 | 1.4:-1250749 | MS.gene63972:CDS |
| AGAACATTTCCTCAAATCCC+AGG | 0.598634 | 1.4:-1250951 | MS.gene63972:CDS |
| TCCAAGCTCCCTTTACCCAA+CGG | 0.604138 | 1.4:-1251909 | MS.gene63972:CDS |
| AAAGGAACACTTGTCCAGAC+CGG | 0.605527 | 1.4:-1251744 | MS.gene63972:CDS |
| TGGTAGCCGCAGCTGGACAA+TGG | 0.606010 | 1.4:-1252028 | MS.gene63972:CDS |
| TGCGGCTACCAAAGATGGGG+TGG | 0.606891 | 1.4:+1252040 | None:intergenic |
| GCAGTGGAATGATACATTCG+AGG | 0.606915 | 1.4:+1250528 | None:intergenic |
| AACAAAGTGAATAATGTGCA+GGG | 0.608995 | 1.4:-1250189 | MS.gene63972:CDS |
| AAGAAGGAAGAGGAGATAGG+TGG | 0.613810 | 1.4:+1252088 | None:intergenic |
| CTGAGCTTGGATAACTCCTA+GGG | 0.614436 | 1.4:+1250922 | None:intergenic |
| ACGTCAGTTTGAACAAACAA+TGG | 0.614768 | 1.4:+1251795 | None:intergenic |
| CAAATTTAACTAGAATGTAG+TGG | 0.615118 | 1.4:-1250976 | MS.gene63972:intron |
| GTGAAGAAGTTGCATGTGCA+TGG | 0.615355 | 1.4:+1251974 | None:intergenic |
| ACAAGTATCAAACATACGAA+TGG | 0.619375 | 1.4:+1251698 | None:intergenic |
| GGTTGTGGAGACCATGCCTA+GGG | 0.621634 | 1.4:-1250727 | MS.gene63972:CDS |
| ACATGGTAATGCTCCCAAGT+GGG | 0.623192 | 1.4:-1250689 | MS.gene63972:CDS |
| GGACGAACATTCGCGAAGCG+AGG | 0.625391 | 1.4:+1250381 | None:intergenic |
| ATCACGAACCAAAATTGCAG+TGG | 0.632842 | 1.4:+1250512 | None:intergenic |
| ATGGTCTCCACAACCCATGT+TGG | 0.632893 | 1.4:+1250735 | None:intergenic |
| CATTTCCTCAAATCCCAGGT+GGG | 0.633836 | 1.4:-1250947 | MS.gene63972:CDS |
| ACCAATCATATTCTGCCCGA+CGG | 0.635254 | 1.4:-1251618 | MS.gene63972:CDS |
| TTATCAAAACGTCCCCACTT+GGG | 0.637091 | 1.4:+1250676 | None:intergenic |
| AACCGACCCAAATCCAACAT+GGG | 0.637839 | 1.4:-1250748 | MS.gene63972:CDS |
| ATTTCCTCAAATCCCAGGTG+GGG | 0.639095 | 1.4:-1250946 | MS.gene63972:CDS |
| GGTGCAAGAATAGGTGAACC+CGG | 0.641982 | 1.4:+1250138 | None:intergenic |
| TTATCCAAGCTCAGGTTCAG+GGG | 0.643701 | 1.4:-1250913 | MS.gene63972:CDS |
| ACTTCGGAACTGCAAAAGCA+CGG | 0.645621 | 1.4:-1250342 | MS.gene63972:CDS |
| CATGGTAATGCTCCCAAGTG+GGG | 0.648349 | 1.4:-1250688 | MS.gene63972:CDS |
| CATTACTCTAGCCCTAGGCA+TGG | 0.651243 | 1.4:+1250716 | None:intergenic |
| AGCTGCGGCTACCAAAGATG+GGG | 0.651533 | 1.4:+1252037 | None:intergenic |
| CGGACGTCAGATTATCATTG+GGG | 0.661128 | 1.4:-1251598 | MS.gene63972:CDS |
| GACATGGTAATGCTCCCAAG+TGG | 0.661755 | 1.4:-1250690 | MS.gene63972:CDS |
| GGAACACTTGTCCAGACCGG+TGG | 0.665244 | 1.4:-1251741 | MS.gene63972:CDS |
| TACTTGCCATTGTCCAGCTG+CGG | 0.669654 | 1.4:+1252022 | None:intergenic |
| ACATTTCCTCAAATCCCAGG+TGG | 0.682481 | 1.4:-1250948 | MS.gene63972:CDS |
| AATGAGTGTGTGTTAAAAGG+TGG | 0.707159 | 1.4:+1250246 | None:intergenic |
| GGACGTCAGATTATCATTGG+GGG | 0.730353 | 1.4:-1251597 | MS.gene63972:CDS |
| AATAGCAGATAAAATCCAGG+AGG | 0.735992 | 1.4:+1250117 | None:intergenic |
| GATTGGCAGGAATTTGACGG+CGG | 0.737585 | 1.4:-1251666 | MS.gene63972:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TACAAAACTAATAACATAAT+CGG | - | chr1.4:1251581-1251600 | MS.gene63972:CDS | 15.0% |
| !!! | TTGTGGTTTTAATTATTATT+TGG | - | chr1.4:1250880-1250899 | MS.gene63972:CDS | 15.0% |
| !! | ATAAAATTGTAACCAATATG+AGG | + | chr1.4:1251707-1251726 | None:intergenic | 20.0% |
| !! | TAAAATTGTAACCAATATGA+GGG | + | chr1.4:1251706-1251725 | None:intergenic | 20.0% |
| !!! | TAGTAAATGTTTTTCATTTG+TGG | - | chr1.4:1250863-1250882 | MS.gene63972:CDS | 20.0% |
| !!! | TTATTAGTTTTGTAAAGAAC+CGG | + | chr1.4:1251575-1251594 | None:intergenic | 20.0% |
| ! | ATACTTGTAACAATTGTGAT+TGG | - | chr1.4:1250483-1250502 | MS.gene63972:CDS | 25.0% |
| ! | CAAATTTAACTAGAATGTAG+TGG | - | chr1.4:1251190-1251209 | MS.gene63972:intron | 25.0% |
| ! | TTTGATTGTAGATTCTTCAA+TGG | + | chr1.4:1251287-1251306 | None:intergenic | 25.0% |
| !! | ACTTTGCATTATGTTTGTTA+AGG | - | chr1.4:1250790-1250809 | MS.gene63972:CDS | 25.0% |
| !! | ATTTCAAGTAAAAGCAACAT+TGG | - | chr1.4:1251865-1251884 | MS.gene63972:CDS | 25.0% |
| !!! | ACTTTTAATTTTTGCTACGT+TGG | - | chr1.4:1251141-1251160 | MS.gene63972:intron | 25.0% |
| AAACAAAGTGAATAATGTGC+AGG | - | chr1.4:1251976-1251995 | MS.gene63972:CDS | 30.0% | |
| AAATTCCTAGTGAAGGAATT+TGG | - | chr1.4:1252086-1252105 | MS.gene63972:CDS | 30.0% | |
| AACAAAGTGAATAATGTGCA+GGG | - | chr1.4:1251977-1251996 | MS.gene63972:CDS | 30.0% | |
| ACAAATAGCAGATAAAATCC+AGG | + | chr1.4:1252055-1252074 | None:intergenic | 30.0% | |
| ACAAGTATCAAACATACGAA+TGG | + | chr1.4:1250471-1250490 | None:intergenic | 30.0% | |
| AGCAACATTGGATAAGAATT+TGG | - | chr1.4:1251877-1251896 | MS.gene63972:CDS | 30.0% | |
| ATCAAAGTTTATACAAGCTG+AGG | - | chr1.4:1251301-1251320 | MS.gene63972:intron | 30.0% | |
| CATAAAGAAATTCCTAGTGA+AGG | - | chr1.4:1252079-1252098 | MS.gene63972:CDS | 30.0% | |
| GAAAATGAGTGTGTGTTAAA+AGG | + | chr1.4:1251926-1251945 | None:intergenic | 30.0% | |
| TATCAAACATACGAATGGTT+CGG | + | chr1.4:1250466-1250485 | None:intergenic | 30.0% | |
| TATCCTCTTTGACTATACTA+AGG | - | chr1.4:1250757-1250776 | MS.gene63972:CDS | 30.0% | |
| TTGTTATGAGAATTGGAAGA+AGG | + | chr1.4:1250097-1250116 | None:intergenic | 30.0% | |
| TTTGGTATATGTTACGATGT+TGG | - | chr1.4:1251895-1251914 | MS.gene63972:CDS | 30.0% | |
| ! | GCTTTTTGATAAGATCCTTT+TGG | + | chr1.4:1251347-1251366 | None:intergenic | 30.0% |
| ! | GTGATTGTTGTTATGAGAAT+TGG | + | chr1.4:1250104-1250123 | None:intergenic | 30.0% |
| ! | TCATTAGTCTGTTCCAAAAA+CGG | + | chr1.4:1250656-1250675 | None:intergenic | 30.0% |
| ! | TTTTACCCTAAAAACGACAA+TGG | - | chr1.4:1250614-1250633 | MS.gene63972:CDS | 30.0% |
| !! | ATATTTGATCGTACTGACTT+TGG | - | chr1.4:1250230-1250249 | MS.gene63972:CDS | 30.0% |
| !! | CGTTTTGATAATTAATGGAG+CGG | - | chr1.4:1251502-1251521 | MS.gene63972:CDS | 30.0% |
| !! | GATCTTATCAAAAAGCATCA+AGG | - | chr1.4:1251351-1251370 | MS.gene63972:intron | 30.0% |
| !! | GTTTTGATAATTAATGGAGC+GGG | - | chr1.4:1251503-1251522 | MS.gene63972:CDS | 30.0% |
| !! | TGGATTTTATCTGCTATTTG+TGG | - | chr1.4:1252054-1252073 | MS.gene63972:CDS | 30.0% |
| AATAGCAGATAAAATCCAGG+AGG | + | chr1.4:1252052-1252071 | None:intergenic | 35.0% | |
| AATGAGTGTGTGTTAAAAGG+TGG | + | chr1.4:1251923-1251942 | None:intergenic | 35.0% | |
| ACGTCAGTTTGAACAAACAA+TGG | + | chr1.4:1250374-1250393 | None:intergenic | 35.0% | |
| CTACCTTAGTATAGTCAAAG+AGG | + | chr1.4:1250763-1250782 | None:intergenic | 35.0% | |
| CTTCGATACTAAGTTCAGTT+GGG | + | chr1.4:1251742-1251761 | None:intergenic | 35.0% | |
| GGGAACAACATATGATATTG+AGG | - | chr1.4:1251997-1252016 | MS.gene63972:CDS | 35.0% | |
| TCCACGTTGAGAAAAACAAA+TGG | + | chr1.4:1250704-1250723 | None:intergenic | 35.0% | |
| TGATATTGAGGTTACTATGC+CGG | - | chr1.4:1252009-1252028 | MS.gene63972:CDS | 35.0% | |
| TGTATCCAAATTCCTTCACT+AGG | + | chr1.4:1252094-1252113 | None:intergenic | 35.0% | |
| TGTTGTTAGCAAAGATGAAG+AGG | + | chr1.4:1250733-1250752 | None:intergenic | 35.0% | |
| TGTTTGTTCAAACTGACGTT+TGG | - | chr1.4:1250375-1250394 | MS.gene63972:CDS | 35.0% | |
| TTGTAACAATTGTGATTGGC+AGG | - | chr1.4:1250487-1250506 | MS.gene63972:CDS | 35.0% | |
| ! | AAACAATGGACGAAAAGTGT+TGG | + | chr1.4:1250360-1250379 | None:intergenic | 35.0% |
| ! | AAAGAACCGGATTTAGAACT+GGG | + | chr1.4:1251562-1251581 | None:intergenic | 35.0% |
| ! | ACTCATTTTCCATGAATCAG+AGG | - | chr1.4:1251936-1251955 | MS.gene63972:CDS | 35.0% |
| ! | CAAGTACTGCAAAAAAGCAT+CGG | - | chr1.4:1250161-1250180 | MS.gene63972:CDS | 35.0% |
| ! | CTTTTAATGCATGTCCTCAA+AGG | - | chr1.4:1251082-1251101 | MS.gene63972:intron | 35.0% |
| ! | GTATCATTCCACTGCAATTT+TGG | - | chr1.4:1251646-1251665 | MS.gene63972:CDS | 35.0% |
| ! | TAAAGAACCGGATTTAGAAC+TGG | + | chr1.4:1251563-1251582 | None:intergenic | 35.0% |
| !! | GGGGACGTTTTGATAATTAA+TGG | - | chr1.4:1251497-1251516 | MS.gene63972:CDS | 35.0% |
| !! | TCCATTTGTTTTTCTCAACG+TGG | - | chr1.4:1250700-1250719 | MS.gene63972:CDS | 35.0% |
| !! | TTTGTTTTTCTCAACGTGGA+TGG | - | chr1.4:1250704-1250723 | MS.gene63972:CDS | 35.0% |
| !!! | AATTTTGGTTCGTGATGGTA+GGG | - | chr1.4:1251661-1251680 | MS.gene63972:CDS | 35.0% |
| !!! | ACACTTAGTTTTGACCTTTG+AGG | + | chr1.4:1251099-1251118 | None:intergenic | 35.0% |
| !!! | TAGCACCATTGTCGTTTTTA+GGG | + | chr1.4:1250622-1250641 | None:intergenic | 35.0% |
| !!! | TTGGGTCGGTTATTTTGATT+CGG | + | chr1.4:1251409-1251428 | None:intergenic | 35.0% |
| AAGGATTGTGGCTTCTACTT+CGG | - | chr1.4:1251808-1251827 | MS.gene63972:CDS | 40.0% | |
| AATGATAATCTGACGTCCGT+CGG | + | chr1.4:1250567-1250586 | None:intergenic | 40.0% | |
| ACGGACGTCAGATTATCATT+GGG | - | chr1.4:1250567-1250586 | MS.gene63972:CDS | 40.0% | |
| AGAACATTTCCTCAAATCCC+AGG | - | chr1.4:1251215-1251234 | MS.gene63972:intron | 40.0% | |
| ATCACGAACCAAAATTGCAG+TGG | + | chr1.4:1251657-1251676 | None:intergenic | 40.0% | |
| ATTATCAAAACGTCCCCACT+TGG | + | chr1.4:1251494-1251513 | None:intergenic | 40.0% | |
| GATATTGAGGTTACTATGCC+GGG | - | chr1.4:1252010-1252029 | MS.gene63972:CDS | 40.0% | |
| GCTTCGATACTAAGTTCAGT+TGG | + | chr1.4:1251743-1251762 | None:intergenic | 40.0% | |
| TGAGAATTGGAAGAAGGAAG+AGG | + | chr1.4:1250091-1250110 | None:intergenic | 40.0% | |
| TGTGATTGGCAGGAATTTGA+CGG | - | chr1.4:1250497-1250516 | MS.gene63972:CDS | 40.0% | |
| TTATCAAAACGTCCCCACTT+GGG | + | chr1.4:1251493-1251512 | None:intergenic | 40.0% | |
| TTCCATGAATCAGAGGTTGT+TGG | - | chr1.4:1251943-1251962 | MS.gene63972:CDS | 40.0% | |
| TTGGAACAGACTAATGATGC+TGG | - | chr1.4:1250659-1250678 | MS.gene63972:CDS | 40.0% | |
| ! | ATAATTAATGGAGCGGGTTC+GGG | - | chr1.4:1251509-1251528 | MS.gene63972:CDS | 40.0% |
| ! | CAAAAGCACGGTCAAAAGTT+GGG | - | chr1.4:1251836-1251855 | MS.gene63972:CDS | 40.0% |
| ! | GATAATTAATGGAGCGGGTT+CGG | - | chr1.4:1251508-1251527 | MS.gene63972:CDS | 40.0% |
| ! | TTTTAACGGTGGTTTCTCTG+GGG | + | chr1.4:1250298-1250317 | None:intergenic | 40.0% |
| !! | GTTTTAACGGTGGTTTCTCT+GGG | + | chr1.4:1250299-1250318 | None:intergenic | 40.0% |
| !!! | ACTGCAATTTTGGTTCGTGA+TGG | - | chr1.4:1251656-1251675 | MS.gene63972:CDS | 40.0% |
| !!! | CAAGCTGAGGTTTTGATTTG+TGG | - | chr1.4:1251314-1251333 | MS.gene63972:intron | 40.0% |
| !!! | CAATTTTGGTTCGTGATGGT+AGG | - | chr1.4:1251660-1251679 | MS.gene63972:CDS | 40.0% |
| !!! | GTAGCACCATTGTCGTTTTT+AGG | + | chr1.4:1250623-1250642 | None:intergenic | 40.0% |
| !!! | TACAGTTCGTTTGCCGTTTT+TGG | - | chr1.4:1250640-1250659 | MS.gene63972:CDS | 40.0% |
| !!! | TGGGTCGGTTATTTTGATTC+GGG | + | chr1.4:1251408-1251427 | None:intergenic | 40.0% |
| AAAGGAACACTTGTCCAGAC+CGG | - | chr1.4:1250422-1250441 | MS.gene63972:CDS | 45.0% | |
| AACCCATGTTGGATTTGGGT+CGG | + | chr1.4:1251423-1251442 | None:intergenic | 45.0% | |
| AACCGACCCAAATCCAACAT+GGG | - | chr1.4:1251418-1251437 | MS.gene63972:CDS | 45.0% | |
| AAGAAGGAAGAGGAGATAGG+TGG | + | chr1.4:1250081-1250100 | None:intergenic | 45.0% | |
| AAGCGAGGTTCAAGGTAAGA+AGG | + | chr1.4:1251773-1251792 | None:intergenic | 45.0% | |
| ACATTTCCTCAAATCCCAGG+TGG | - | chr1.4:1251218-1251237 | MS.gene63972:intron | 45.0% | |
| ACCAATCATATTCTGCCCGA+CGG | - | chr1.4:1250548-1250567 | MS.gene63972:CDS | 45.0% | |
| ACTTCGGAACTGCAAAAGCA+CGG | - | chr1.4:1251824-1251843 | MS.gene63972:CDS | 45.0% | |
| AGTTATCCAAGCTCAGGTTC+AGG | - | chr1.4:1251251-1251270 | MS.gene63972:intron | 45.0% | |
| ATGATAATCTGACGTCCGTC+GGG | + | chr1.4:1250566-1250585 | None:intergenic | 45.0% | |
| ATGCCTAGGGCTAGAGTAAT+GGG | - | chr1.4:1251452-1251471 | MS.gene63972:CDS | 45.0% | |
| ATTTCCTCAAATCCCAGGTG+GGG | - | chr1.4:1251220-1251239 | MS.gene63972:intron | 45.0% | |
| CACCAACAACCTCTGATTCA+TGG | + | chr1.4:1251948-1251967 | None:intergenic | 45.0% | |
| CACCGTTAAAACCGATTGCA+CGG | - | chr1.4:1250307-1250326 | MS.gene63972:CDS | 45.0% | |
| CATTTCCTCAAATCCCAGGT+GGG | - | chr1.4:1251219-1251238 | MS.gene63972:intron | 45.0% | |
| CCACAACCCATGTTGGATTT+GGG | + | chr1.4:1251427-1251446 | None:intergenic | 45.0% | |
| CGGACGTCAGATTATCATTG+GGG | - | chr1.4:1250568-1250587 | MS.gene63972:CDS | 45.0% | |
| CTGAGCTTGGATAACTCCTA+GGG | + | chr1.4:1251247-1251266 | None:intergenic | 45.0% | |
| GAAGTAGAAGCCACAATCCT+TGG | + | chr1.4:1251809-1251828 | None:intergenic | 45.0% | |
| GAATCAGAGGTTGTTGGTGT+TGG | - | chr1.4:1251949-1251968 | MS.gene63972:CDS | 45.0% | |
| GAATGTTCGTCCAAGGATTG+TGG | - | chr1.4:1251796-1251815 | MS.gene63972:CDS | 45.0% | |
| GACACTTTCCGTTGGGTAAA+GGG | + | chr1.4:1250268-1250287 | None:intergenic | 45.0% | |
| GACGGACGTCAGATTATCAT+TGG | - | chr1.4:1250566-1250585 | MS.gene63972:CDS | 45.0% | |
| GCAGTGGAATGATACATTCG+AGG | + | chr1.4:1251641-1251660 | None:intergenic | 45.0% | |
| GGACGTCAGATTATCATTGG+GGG | - | chr1.4:1250569-1250588 | MS.gene63972:CDS | 45.0% | |
| GTCTGGACAAGTGTTCCTTT+AGG | + | chr1.4:1250422-1250441 | None:intergenic | 45.0% | |
| GTGAAGAAGTTGCATGTGCA+TGG | + | chr1.4:1250195-1250214 | None:intergenic | 45.0% | |
| GTTATCCAAGCTCAGGTTCA+GGG | - | chr1.4:1251252-1251271 | MS.gene63972:intron | 45.0% | |
| TAACCGACCCAAATCCAACA+TGG | - | chr1.4:1251417-1251436 | MS.gene63972:CDS | 45.0% | |
| TACATTCGAGGCGTATGAGA+TGG | + | chr1.4:1251629-1251648 | None:intergenic | 45.0% | |
| TCATGACGACACTTTCCGTT+GGG | + | chr1.4:1250275-1250294 | None:intergenic | 45.0% | |
| TCCACAACCCATGTTGGATT+TGG | + | chr1.4:1251428-1251447 | None:intergenic | 45.0% | |
| TGGAAGAAGGAAGAGGAGAT+AGG | + | chr1.4:1250084-1250103 | None:intergenic | 45.0% | |
| TTATCCAAGCTCAGGTTCAG+GGG | - | chr1.4:1251253-1251272 | MS.gene63972:intron | 45.0% | |
| ! | AATCCAGGAGGTGCAAGAAT+AGG | + | chr1.4:1252040-1252059 | None:intergenic | 45.0% |
| ! | ACATGGTAATGCTCCCAAGT+GGG | - | chr1.4:1251477-1251496 | MS.gene63972:CDS | 45.0% |
| ! | ATTTGTGGTGGAGCTCCAAA+AGG | - | chr1.4:1251329-1251348 | MS.gene63972:intron | 45.0% |
| ! | GCAAAAGCACGGTCAAAAGT+TGG | - | chr1.4:1251835-1251854 | MS.gene63972:CDS | 45.0% |
| ! | TAATTAATGGAGCGGGTTCG+GGG | - | chr1.4:1251510-1251529 | MS.gene63972:CDS | 45.0% |
| !! | ACTGACGTTTGGTGTTCTTC+CGG | - | chr1.4:1250386-1250405 | MS.gene63972:CDS | 45.0% |
| !! | AGCCGTGCAATCGGTTTTAA+CGG | + | chr1.4:1250312-1250331 | None:intergenic | 45.0% |
| !! | GCAAAAAAGCATCGGCATTG+TGG | - | chr1.4:1250169-1250188 | MS.gene63972:CDS | 45.0% |
| !! | GGTTTTAACGGTGGTTTCTC+TGG | + | chr1.4:1250300-1250319 | None:intergenic | 45.0% |
| !! | TCCTTTAGGATTCACCGAAC+CGG | + | chr1.4:1250408-1250427 | None:intergenic | 45.0% |
| !!! | GCTGAGGTTTTGATTTGTGG+TGG | - | chr1.4:1251317-1251336 | MS.gene63972:intron | 45.0% |
| AACCGATTGCACGGCTCATT+CGG | - | chr1.4:1250316-1250335 | MS.gene63972:CDS | 50.0% | |
| AAGGAAGAGGAGATAGGTGG+TGG | + | chr1.4:1250078-1250097 | None:intergenic | 50.0% | |
| AATCACCACCACCCCATCTT+TGG | - | chr1.4:1250118-1250137 | MS.gene63972:CDS | 50.0% | |
| ATGGTCTCCACAACCCATGT+TGG | + | chr1.4:1251434-1251453 | None:intergenic | 50.0% | |
| CATGCCTAGGGCTAGAGTAA+TGG | - | chr1.4:1251451-1251470 | MS.gene63972:CDS | 50.0% | |
| CATTACTCTAGCCCTAGGCA+TGG | + | chr1.4:1251453-1251472 | None:intergenic | 50.0% | |
| CCTAGGAGTTATCCAAGCTC+AGG | - | chr1.4:1251245-1251264 | MS.gene63972:intron | 50.0% | |
| CCTGAGCTTGGATAACTCCT+AGG | + | chr1.4:1251248-1251267 | None:intergenic | 50.0% | |
| CGACACTTTCCGTTGGGTAA+AGG | + | chr1.4:1250269-1250288 | None:intergenic | 50.0% | |
| CGTGATGGTAGGGTTCTTGT+TGG | - | chr1.4:1251671-1251690 | MS.gene63972:CDS | 50.0% | |
| GATGGTAGGGTTCTTGTTGG+TGG | - | chr1.4:1251674-1251693 | MS.gene63972:CDS | 50.0% | |
| GATTGGCAGGAATTTGACGG+CGG | - | chr1.4:1250500-1250519 | MS.gene63972:CDS | 50.0% | |
| GCATCAAGGCGTGAGTTTCT+TGG | - | chr1.4:1251365-1251384 | MS.gene63972:intron | 50.0% | |
| GGTGCAAGAATAGGTGAACC+CGG | + | chr1.4:1252031-1252050 | None:intergenic | 50.0% | |
| GGTGGTAGCAACCCTCATAT+TGG | - | chr1.4:1251692-1251711 | MS.gene63972:CDS | 50.0% | |
| GTCATGACGACACTTTCCGT+TGG | + | chr1.4:1250276-1250295 | None:intergenic | 50.0% | |
| TACTTGCCATTGTCCAGCTG+CGG | + | chr1.4:1250147-1250166 | None:intergenic | 50.0% | |
| TCACCCATTACTCTAGCCCT+AGG | + | chr1.4:1251458-1251477 | None:intergenic | 50.0% | |
| TCACCTATTCTTGCACCTCC+TGG | - | chr1.4:1252034-1252053 | MS.gene63972:CDS | 50.0% | |
| TCCAAGCTCCCTTTACCCAA+CGG | - | chr1.4:1250257-1250276 | MS.gene63972:CDS | 50.0% | |
| TCCGTCGGGCAGAATATGAT+TGG | + | chr1.4:1250552-1250571 | None:intergenic | 50.0% | |
| ! | CATGGTAATGCTCCCAAGTG+GGG | - | chr1.4:1251478-1251497 | MS.gene63972:CDS | 50.0% |
| ! | CCCAAATCCAACATGGGTTG+TGG | - | chr1.4:1251424-1251443 | MS.gene63972:CDS | 50.0% |
| ! | GACATGGTAATGCTCCCAAG+TGG | - | chr1.4:1251476-1251495 | MS.gene63972:CDS | 50.0% |
| !! | CGTGCAATCGGTTTTAACGG+TGG | + | chr1.4:1250309-1250328 | None:intergenic | 50.0% |
| !! | CGTTTGGTGTTCTTCCGGTT+CGG | - | chr1.4:1250391-1250410 | MS.gene63972:CDS | 50.0% |
| !! | GCGAGACCCAGTTCTAAATC+CGG | - | chr1.4:1251553-1251572 | MS.gene63972:CDS | 50.0% |
| !! | GGCTAGAGTAATGGGTGACA+TGG | - | chr1.4:1251460-1251479 | MS.gene63972:CDS | 50.0% |
| !! | TCCGGTTCGGTGAATCCTAA+AGG | - | chr1.4:1250404-1250423 | MS.gene63972:CDS | 50.0% |
| AGCTGCGGCTACCAAAGATG+GGG | + | chr1.4:1250132-1250151 | None:intergenic | 55.0% | |
| AGTACCCCTGAACCTGAGCT+TGG | + | chr1.4:1251260-1251279 | None:intergenic | 55.0% | |
| CAGCTGCGGCTACCAAAGAT+GGG | + | chr1.4:1250133-1250152 | None:intergenic | 55.0% | |
| CATTCGCGAAGCGAGGTTCA+AGG | + | chr1.4:1251781-1251800 | None:intergenic | 55.0% | |
| GACCGAATGAGCCGTGCAAT+CGG | + | chr1.4:1250321-1250340 | None:intergenic | 55.0% | |
| GCTTCGCGAATGTTCGTCCA+AGG | - | chr1.4:1251789-1251808 | MS.gene63972:CDS | 55.0% | |
| GGTTGTGGAGACCATGCCTA+GGG | - | chr1.4:1251439-1251458 | MS.gene63972:CDS | 55.0% | |
| GTCTCCATCGTTGTAGCCAC+CGG | + | chr1.4:1250444-1250463 | None:intergenic | 55.0% | |
| TCCGTTGGGTAAAGGGAGCT+TGG | + | chr1.4:1250261-1250280 | None:intergenic | 55.0% | |
| ! | GAAGAGGAGATAGGTGGTGG+TGG | + | chr1.4:1250075-1250094 | None:intergenic | 55.0% |
| AAATCCCAGGTGGGGACCCT+AGG | - | chr1.4:1251228-1251247 | MS.gene63972:intron | 60.0% | |
| AACTCCTAGGGTCCCCACCT+GGG | + | chr1.4:1251235-1251254 | None:intergenic | 60.0% | |
| CAGACCGGTGGCTACAACGA+TGG | - | chr1.4:1250437-1250456 | MS.gene63972:CDS | 60.0% | |
| CATCGTTGTAGCCACCGGTC+TGG | + | chr1.4:1250439-1250458 | None:intergenic | 60.0% | |
| CCAGCTGCGGCTACCAAAGA+TGG | + | chr1.4:1250134-1250153 | None:intergenic | 60.0% | |
| GGAACACTTGTCCAGACCGG+TGG | - | chr1.4:1250425-1250444 | MS.gene63972:CDS | 60.0% | |
| GGACAGCAGGGTGGGAATAC+GGG | - | chr1.4:1251531-1251550 | MS.gene63972:CDS | 60.0% | |
| GGACGAACATTCGCGAAGCG+AGG | + | chr1.4:1251788-1251807 | None:intergenic | 60.0% | |
| GGCTACCAAAGATGGGGTGG+TGG | + | chr1.4:1250126-1250145 | None:intergenic | 60.0% | |
| GGGACAGCAGGGTGGGAATA+CGG | - | chr1.4:1251530-1251549 | MS.gene63972:CDS | 60.0% | |
| GGGTTGTGGAGACCATGCCT+AGG | - | chr1.4:1251438-1251457 | MS.gene63972:CDS | 60.0% | |
| TAACTCCTAGGGTCCCCACC+TGG | + | chr1.4:1251236-1251255 | None:intergenic | 60.0% | |
| TGCGGCTACCAAAGATGGGG+TGG | + | chr1.4:1250129-1250148 | None:intergenic | 60.0% | |
| TGGTAGCCGCAGCTGGACAA+TGG | - | chr1.4:1250138-1250157 | MS.gene63972:CDS | 60.0% | |
| ! | CCATCTTTGGTAGCCGCAGC+TGG | - | chr1.4:1250131-1250150 | MS.gene63972:CDS | 60.0% |
| !! | GAGGAGATAGGTGGTGGTGG+TGG | + | chr1.4:1250072-1250091 | None:intergenic | 60.0% |
| !! | TTGACGGCGGACTTGCTGCT+CGG | - | chr1.4:1250513-1250532 | MS.gene63972:CDS | 60.0% |
| GGGTCCCCACCTGGGATTTG+AGG | + | chr1.4:1251227-1251246 | None:intergenic | 65.0% | |
| !! | GCGGACTTGCTGCTCGGAGA+TGG | - | chr1.4:1250519-1250538 | MS.gene63972:CDS | 65.0% |
| GGGTTCGGGGACAGCAGGGT+GGG | - | chr1.4:1251523-1251542 | MS.gene63972:CDS | 70.0% | |
| ! | GAGCGGGTTCGGGGACAGCA+GGG | - | chr1.4:1251519-1251538 | MS.gene63972:CDS | 70.0% |
| CGGGTTCGGGGACAGCAGGG+TGG | - | chr1.4:1251522-1251541 | MS.gene63972:CDS | 75.0% | |
| ! | GGAGCGGGTTCGGGGACAGC+AGG | - | chr1.4:1251518-1251537 | MS.gene63972:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 1250065 | 1252123 | 1250065 | ID=MS.gene63972 |
| chr1.4 | mRNA | 1250065 | 1252123 | 1250065 | ID=MS.gene63972.t1;Parent=MS.gene63972 |
| chr1.4 | exon | 1251410 | 1252123 | 1251410 | ID=MS.gene63972.t1.exon1;Parent=MS.gene63972.t1 |
| chr1.4 | CDS | 1251410 | 1252123 | 1251410 | ID=cds.MS.gene63972.t1;Parent=MS.gene63972.t1 |
| chr1.4 | exon | 1250065 | 1250985 | 1250065 | ID=MS.gene63972.t1.exon2;Parent=MS.gene63972.t1 |
| chr1.4 | CDS | 1250065 | 1250985 | 1250065 | ID=cds.MS.gene63972.t1;Parent=MS.gene63972.t1 |
| Gene Sequence |
| Protein sequence |
