AlfalfaGEDB | MS.gene041542

M. sativa cultivar XinJiangDaYe / MS.gene041542

KEGG: -
GO: -
PFAM: PF03168.16

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene041542.t1	KEH32283.1	91.1	246	22	0	1	246	2	247	1.20E-107	399.4

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene041542.t1	Q9FNH6	51.9	239	105	4	1	238	1	230	1.1e-42	174.9

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene041542.t1	A0A072UT86	91.1	246	22	0	1	246	2	247	8.5e-108	399.4

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene041542	MS.gene055658	PPI
MS.gene051327	MS.gene041542	PPI
MS.gene041542	MS.gene036506	PPI
MS.gene041542	MS.gene051327	PPI
MS.gene041542	MS.gene035313	PPI
MS.gene036507	MS.gene041542	PPI
MS.gene050363	MS.gene041542	PPI
MS.gene041542	MS.gene025640	PPI
MS.gene041542	MS.gene70399	PPI
MS.gene41069	MS.gene041542	PPI
MS.gene35049	MS.gene041542	PPI
MS.gene028407	MS.gene041542	PPI
MS.gene041542	MS.gene58402	PPI
MS.gene007146	MS.gene041542	PPI
MS.gene034789	MS.gene041542	PPI
MS.gene041542	MS.gene036507	PPI
MS.gene041542	MS.gene055657	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene041542.t1	MTR_4g119428	93.902	246	15	0	1	246	2	247	9.41e-164	452
MS.gene041542.t1	MTR_1g057270	63.821	246	86	1	1	243	1	246	1.44e-95	280
MS.gene041542.t1	MTR_7g105870	48.305	236	108	4	4	238	5	227	1.82e-56	180
MS.gene041542.t1	MTR_7g106000	37.143	245	127	6	1	238	1	225	1.22e-52	170
MS.gene041542.t1	MTR_7g106010	40.444	225	113	5	5	224	4	212	2.00e-51	167
MS.gene041542.t1	MTR_7g106030	37.054	224	123	5	5	224	7	216	3.14e-44	149
MS.gene041542.t1	MTR_7g105970	37.551	245	126	6	1	238	1	225	1.14e-42	144
MS.gene041542.t1	MTR_1g057400	36.634	202	117	5	40	236	11	206	3.03e-40	138
MS.gene041542.t1	MTR_6g071410	42.029	138	78	2	58	194	15	151	2.20e-30	112
MS.gene041542.t1	MTR_6g070890	42.029	138	78	2	58	194	15	151	2.20e-30	112
MS.gene041542.t1	MTR_6g471090	38.372	172	85	7	40	206	9	164	3.54e-30	112
MS.gene041542.t1	MTR_6g070900	39.735	151	88	3	45	194	3	151	1.82e-29	110
MS.gene041542.t1	MTR_6g071400	39.735	151	88	3	45	194	3	151	1.82e-29	110
MS.gene041542.t1	MTR_1g057290	37.952	166	97	3	78	238	52	216	5.17e-24	96.3
MS.gene041542.t1	MTR_6g471080	42.254	142	79	3	54	194	7	146	1.40e-23	94.7
MS.gene041542.t1	MTR_2g048270	40.397	151	77	5	92	236	2	145	1.89e-21	88.2
MS.gene041542.t1	MTR_2g011350	32.609	138	92	1	65	202	35	171	3.17e-21	88.6
MS.gene041542.t1	MTR_4g094322	56.522	69	29	1	177	244	2	70	1.05e-20	83.2
MS.gene041542.t1	MTR_3g078800	31.677	161	107	3	57	215	73	232	1.34e-18	82.8
MS.gene041542.t1	MTR_2g086790	26.316	190	124	4	53	227	15	203	6.12e-17	77.4
MS.gene041542.t1	MTR_1g057230	55.882	68	28	2	179	246	31	96	9.76e-16	70.9
MS.gene041542.t1	MTR_5g087760	28.177	181	112	5	42	215	65	234	1.34e-15	74.3
MS.gene041542.t1	MTR_3g063310	33.333	153	91	4	68	215	84	230	3.16e-15	73.2
MS.gene041542.t1	MTR_7g118270	29.560	159	108	3	62	218	54	210	4.56e-15	72.4
MS.gene041542.t1	MTR_5g076170	32.973	185	117	6	40	222	70	249	5.60e-14	70.1
MS.gene041542.t1	MTR_1g057420	26.923	156	112	2	73	227	39	193	2.64e-13	67.0
MS.gene041542.t1	MTR_4g051880	30.657	137	85	3	76	203	43	178	3.57e-13	67.0
MS.gene041542.t1	MTR_1g105570	23.661	224	150	7	4	223	10	216	1.39e-12	65.5
MS.gene041542.t1	MTR_6g453010	30.675	163	99	4	61	211	18	178	1.45e-12	64.7
MS.gene041542.t1	MTR_1g057300	40.000	100	53	3	40	139	12	104	1.71e-12	63.2
MS.gene041542.t1	MTR_2g100060	29.054	148	101	3	67	212	78	223	2.03e-12	65.5
MS.gene041542.t1	MTR_3g078820	28.966	145	100	3	72	215	44	186	6.16e-12	63.5
MS.gene041542.t1	MTR_7g106050	25.503	149	107	3	57	204	25	170	2.52e-11	61.6

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene041542.t1	AT3G11650	43.590	234	128	3	6	238	8	238	4.14e-64	200
MS.gene041542.t1	AT5G06320	45.607	239	120	4	1	238	1	230	7.24e-59	186
MS.gene041542.t1	AT2G35980	42.534	221	105	5	2	217	3	206	3.21e-56	179
MS.gene041542.t1	AT2G35460	35.124	242	139	5	6	238	5	237	3.49e-53	172
MS.gene041542.t1	AT1G32270	33.766	154	102	0	75	228	1	154	8.67e-24	98.2
MS.gene041542.t1	AT1G32270	33.766	154	102	0	75	228	1	154	1.81e-23	98.2
MS.gene041542.t1	AT5G22870	32.778	180	112	5	52	223	24	202	1.03e-20	87.4
MS.gene041542.t1	AT2G27080	28.889	180	116	4	40	215	68	239	1.54e-18	82.4
MS.gene041542.t1	AT2G27080	28.889	180	116	4	40	215	68	239	1.54e-18	82.4
MS.gene041542.t1	AT4G01410	28.571	161	113	2	54	213	44	203	5.69e-18	80.5
MS.gene041542.t1	AT4G05220	25.123	203	136	5	17	215	16	206	3.75e-17	78.2
MS.gene041542.t1	AT3G52470	24.176	182	136	2	48	228	13	193	4.87e-17	77.4
MS.gene041542.t1	AT4G09590	27.500	160	114	2	54	212	22	180	6.00e-17	77.4
MS.gene041542.t1	AT5G53730	27.907	172	119	4	67	235	40	209	9.66e-17	76.6
MS.gene041542.t1	AT2G35970	26.875	160	115	2	54	212	22	180	4.90e-15	72.0
MS.gene041542.t1	AT3G44220	25.000	176	126	3	46	220	16	186	6.49e-15	71.6
MS.gene041542.t1	AT3G11660	28.022	182	118	6	53	227	14	189	8.03e-15	71.2
MS.gene041542.t1	AT1G61760	23.383	201	143	4	16	215	14	204	1.64e-14	70.9
MS.gene041542.t1	AT2G35960	23.899	159	119	2	70	227	37	194	5.39e-13	66.2
MS.gene041542.t1	AT5G36970	27.128	188	115	7	17	201	44	212	7.92e-12	63.5
MS.gene041542.t1	AT5G22200	24.286	140	104	2	73	211	43	181	1.64e-11	62.4

Find 63 sgRNAs with CRISPR-Local

Find 68 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CAATCGTTGGTTTCCTCTTC+TGG	0.159458	8.2:-10974874	MS.gene041542:CDS
AAACAATGGAACTTCTTCTT+TGG	0.219254	8.2:-10974414	MS.gene041542:CDS
GAGACGAACAATGGGGTTTA+TGG	0.230591	8.2:-10974542	MS.gene041542:CDS
TAGACACCAACTCTTCTATT+AGG	0.243076	8.2:+10974731	None:intergenic
TGGCTATGATTCTGCAAATT+AGG	0.245341	8.2:+10974915	None:intergenic
ATGGCCGATCATCAACTTAA+TGG	0.310146	8.2:-10975070	MS.gene041542:CDS
TTTGAGTTCAAGTCAGATTT+CGG	0.321473	8.2:-10974576	MS.gene041542:CDS
AACAATGGAACTTCTTCTTT+GGG	0.334017	8.2:-10974413	MS.gene041542:CDS
TTTCGTTCTACAAAGATGTT+AGG	0.352398	8.2:-10974688	MS.gene041542:CDS
AGACACCAACTCTTCTATTA+GGG	0.354262	8.2:+10974732	None:intergenic
TCAGATTTCGGAGTTCAATA+AGG	0.356102	8.2:-10974564	MS.gene041542:CDS
GCTTAATGTTAGGTTTGCCT+TGG	0.360646	8.2:-10974501	MS.gene041542:CDS
GGAACTTCTTCTTTGGGTAA+TGG	0.362602	8.2:-10974407	MS.gene041542:CDS
AAACCATCATTGTGATTTGA+AGG	0.371474	8.2:-10974450	MS.gene041542:CDS
CAACTTAATGGCGCTCACTA+TGG	0.374702	8.2:-10975058	MS.gene041542:CDS
AAAATGCTTGTATTCTTATG+AGG	0.386830	8.2:+10974632	None:intergenic
CTTAATGTTAGGTTTGCCTT+GGG	0.387185	8.2:-10974500	MS.gene041542:CDS
GGTCTCGTTGGTGGGATGGA+AGG	0.412273	8.2:+10975034	None:intergenic
GGCTTCTGCAGTTGCATCTT+CGG	0.421562	8.2:-10974983	MS.gene041542:CDS
TTCTACAAAGATGTTAGGTT+TGG	0.421817	8.2:-10974683	MS.gene041542:CDS
ACGGAACAACAACCTCCATT+TGG	0.427174	8.2:+10974355	None:intergenic
TTCAAGCCACTCCTTGTGAA+TGG	0.435014	8.2:-10974382	MS.gene041542:CDS
GCCTTGGGTTTGATCAAGAC+AGG	0.435553	8.2:-10974485	MS.gene041542:CDS
GTCTCGTTGGTGGGATGGAA+GGG	0.452448	8.2:+10975035	None:intergenic
TCAAGCCACTCCTTGTGAAT+GGG	0.458222	8.2:-10974381	MS.gene041542:CDS
TGGTGGTCTCGTTGGTGGGA+TGG	0.462701	8.2:+10975030	None:intergenic
CGCCTTGGTGGTCTCGTTGG+TGG	0.462770	8.2:+10975025	None:intergenic
GAACCTTCAAATCACAATGA+TGG	0.467040	8.2:+10974447	None:intergenic
CGCTCTCAAGTTCACCGTTA+CGG	0.467483	8.2:-10974834	MS.gene041542:CDS
CCGGCATTGTGGCGTCGCCT+TGG	0.473024	8.2:+10975010	None:intergenic
CGACGCCACAATGCCGGCTG+TGG	0.473989	8.2:-10975004	MS.gene041542:CDS
TCAATAAGGAGACGAACAAT+GGG	0.474447	8.2:-10974550	MS.gene041542:CDS
GTTCCATTGTTTGATTTCAA+AGG	0.475107	8.2:+10974425	None:intergenic
CATAGCCACTATCATCATCT+TGG	0.479266	8.2:-10974900	MS.gene041542:CDS
CTTGTGAATGGGATTCCAAA+TGG	0.490778	8.2:-10974370	MS.gene041542:CDS
GGTTTATGGAATTAATTTGA+AGG	0.491580	8.2:-10974528	MS.gene041542:CDS
CCAAGGCGACGCCACAATGC+CGG	0.500601	8.2:-10975010	MS.gene041542:CDS
GCATTGTGGCGTCGCCTTGG+TGG	0.501481	8.2:+10975013	None:intergenic
ATCATCTTGGTGGCAATCGT+TGG	0.506170	8.2:-10974887	MS.gene041542:CDS
ACGGTGAACTTGAGAGCGTT+AGG	0.511266	8.2:+10974839	None:intergenic
GCCTTGGTGGTCTCGTTGGT+GGG	0.515070	8.2:+10975026	None:intergenic
GCAACTGCAGAAGCCACAGC+CGG	0.529666	8.2:+10974991	None:intergenic
TTCAATAAGGAGACGAACAA+TGG	0.532039	8.2:-10974551	MS.gene041542:CDS
GGAATCCCATTCACAAGGAG+TGG	0.534763	8.2:+10974376	None:intergenic
AGAAACCCTAATAGAAGAGT+TGG	0.542018	8.2:-10974737	MS.gene041542:CDS
CCTTGGGTTTGATCAAGACA+GGG	0.553635	8.2:-10974484	MS.gene041542:CDS
CGTCGCCTTGGTGGTCTCGT+TGG	0.559136	8.2:+10975022	None:intergenic
TGCCACCAAGATGATGATAG+TGG	0.568500	8.2:+10974895	None:intergenic
GGCTGCTTTAGAAGCTGTTG+CGG	0.570457	8.2:-10974962	MS.gene041542:CDS
AGGTTTGGTACTCAAACCCT+AGG	0.572620	8.2:-10974668	MS.gene041542:CDS
AGCGCCATTAAGTTGATGAT+CGG	0.582874	8.2:+10975066	None:intergenic
AGCCACTATCATCATCTTGG+TGG	0.583458	8.2:-10974897	MS.gene041542:CDS
CCCTGTCTTGATCAAACCCA+AGG	0.584419	8.2:+10974484	None:intergenic
GAAATCTGACTTGAACTCAA+AGG	0.585603	8.2:+10974578	None:intergenic
CATTTGGAATCCCATTCACA+AGG	0.609444	8.2:+10974371	None:intergenic
AGCAAGTGATGCCTCCGTAA+CGG	0.610765	8.2:+10974820	None:intergenic
GTTCCTTTGAAATCAAACAA+TGG	0.618380	8.2:-10974428	MS.gene041542:CDS
AGAAGCCACAGCCGGCATTG+TGG	0.624953	8.2:+10974999	None:intergenic
GACGCACGATAAGCCAGAAG+AGG	0.641544	8.2:+10974861	None:intergenic
TCTCAAGTTCACCGTTACGG+AGG	0.686548	8.2:-10974831	MS.gene041542:CDS
TCCCACCAACGAGACCACCA+AGG	0.699917	8.2:-10975027	MS.gene041542:CDS
GTGAATGGGATTCCAAATGG+AGG	0.700064	8.2:-10974367	MS.gene041542:CDS
CAATAAGGAGACGAACAATG+GGG	0.723520	8.2:-10974549	MS.gene041542:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	ATTTTGAATCCTGTTTTTAA+AGG	-	chr8.2:10974808-10974827	MS.gene041542:CDS	20.0%
!	AAAATGCTTGTATTCTTATG+AGG	+	chr8.2:10974793-10974812	None:intergenic	25.0%
!!	GGTTTATGGAATTAATTTGA+AGG	-	chr8.2:10974894-10974913	MS.gene041542:CDS	25.0%
	AAACAATGGAACTTCTTCTT+TGG	-	chr8.2:10975008-10975027	MS.gene041542:CDS	30.0%
	AAACCATCATTGTGATTTGA+AGG	-	chr8.2:10974972-10974991	MS.gene041542:CDS	30.0%
	AACAATGGAACTTCTTCTTT+GGG	-	chr8.2:10975009-10975028	MS.gene041542:CDS	30.0%
	TTCTACAAAGATGTTAGGTT+TGG	-	chr8.2:10974739-10974758	MS.gene041542:CDS	30.0%
	TTTCGTTCTACAAAGATGTT+AGG	-	chr8.2:10974734-10974753	MS.gene041542:CDS	30.0%
!	AGGTTGAAAGAATTTTCCTA+GGG	+	chr8.2:10974773-10974792	None:intergenic	30.0%
!	GTTCCATTGTTTGATTTCAA+AGG	+	chr8.2:10975000-10975019	None:intergenic	30.0%
!	TGAAGGTTTTGCTTAATGTT+AGG	-	chr8.2:10974911-10974930	MS.gene041542:CDS	30.0%
!	TTTGAGTTCAAGTCAGATTT+CGG	-	chr8.2:10974846-10974865	MS.gene041542:CDS	30.0%
!!	ACTTGTTGTCCTTTAAAAAC+AGG	+	chr8.2:10974820-10974839	None:intergenic	30.0%
!!	GTTCCTTTGAAATCAAACAA+TGG	-	chr8.2:10974994-10975013	MS.gene041542:CDS	30.0%
	AGAAACCCTAATAGAAGAGT+TGG	-	chr8.2:10974685-10974704	MS.gene041542:CDS	35.0%
	AGACACCAACTCTTCTATTA+GGG	+	chr8.2:10974693-10974712	None:intergenic	35.0%
	CTTAATGTTAGGTTTGCCTT+GGG	-	chr8.2:10974922-10974941	MS.gene041542:CDS	35.0%
	GAACCTTCAAATCACAATGA+TGG	+	chr8.2:10974978-10974997	None:intergenic	35.0%
	TAGACACCAACTCTTCTATT+AGG	+	chr8.2:10974694-10974713	None:intergenic	35.0%
	TCAATAAGGAGACGAACAAT+GGG	-	chr8.2:10974872-10974891	MS.gene041542:CDS	35.0%
	TCAGATTTCGGAGTTCAATA+AGG	-	chr8.2:10974858-10974877	MS.gene041542:CDS	35.0%
	TGGCTATGATTCTGCAAATT+AGG	+	chr8.2:10974510-10974529	None:intergenic	35.0%
	TTCAATAAGGAGACGAACAA+TGG	-	chr8.2:10974871-10974890	MS.gene041542:CDS	35.0%
!	GAAATCTGACTTGAACTCAA+AGG	+	chr8.2:10974847-10974866	None:intergenic	35.0%
!	GAGGTTGAAAGAATTTTCCT+AGG	+	chr8.2:10974774-10974793	None:intergenic	35.0%
	ATGGCCGATCATCAACTTAA+TGG	-	chr8.2:10974352-10974371	MS.gene041542:CDS	40.0%
	CAATAAGGAGACGAACAATG+GGG	-	chr8.2:10974873-10974892	MS.gene041542:CDS	40.0%
	CATAGCCACTATCATCATCT+TGG	-	chr8.2:10974522-10974541	MS.gene041542:CDS	40.0%
	CTTGTGAATGGGATTCCAAA+TGG	-	chr8.2:10975052-10975071	MS.gene041542:CDS	40.0%
	GCTTAATGTTAGGTTTGCCT+TGG	-	chr8.2:10974921-10974940	MS.gene041542:CDS	40.0%
	GGAACTTCTTCTTTGGGTAA+TGG	-	chr8.2:10975015-10975034	MS.gene041542:CDS	40.0%
!	CATTTGGAATCCCATTCACA+AGG	+	chr8.2:10975054-10975073	None:intergenic	40.0%
!!	AGCGCCATTAAGTTGATGAT+CGG	+	chr8.2:10974359-10974378	None:intergenic	40.0%
	ACGGAACAACAACCTCCATT+TGG	+	chr8.2:10975070-10975089	None:intergenic	45.0%
	AGCCACTATCATCATCTTGG+TGG	-	chr8.2:10974525-10974544	MS.gene041542:CDS	45.0%
	CAACTTAATGGCGCTCACTA+TGG	-	chr8.2:10974364-10974383	MS.gene041542:CDS	45.0%
	CCTTGGGTTTGATCAAGACA+GGG	-	chr8.2:10974938-10974957	MS.gene041542:CDS	45.0%
	GAGACGAACAATGGGGTTTA+TGG	-	chr8.2:10974880-10974899	MS.gene041542:CDS	45.0%
	GTGAATGGGATTCCAAATGG+AGG	-	chr8.2:10975055-10975074	MS.gene041542:CDS	45.0%
	TCAAGCCACTCCTTGTGAAT+GGG	-	chr8.2:10975041-10975060	MS.gene041542:CDS	45.0%
	TGCCACCAAGATGATGATAG+TGG	+	chr8.2:10974530-10974549	None:intergenic	45.0%
	TTCAAGCCACTCCTTGTGAA+TGG	-	chr8.2:10975040-10975059	MS.gene041542:CDS	45.0%
!	AGGTTTGGTACTCAAACCCT+AGG	-	chr8.2:10974754-10974773	MS.gene041542:CDS	45.0%
!	ATCATCTTGGTGGCAATCGT+TGG	-	chr8.2:10974535-10974554	MS.gene041542:CDS	45.0%
!!	CAATCGTTGGTTTCCTCTTC+TGG	-	chr8.2:10974548-10974567	MS.gene041542:CDS	45.0%
	AGCAAGTGATGCCTCCGTAA+CGG	+	chr8.2:10974605-10974624	None:intergenic	50.0%
	CCCTGTCTTGATCAAACCCA+AGG	+	chr8.2:10974941-10974960	None:intergenic	50.0%
	CGCTCTCAAGTTCACCGTTA+CGG	-	chr8.2:10974588-10974607	MS.gene041542:CDS	50.0%
	GCCTTGGGTTTGATCAAGAC+AGG	-	chr8.2:10974937-10974956	MS.gene041542:CDS	50.0%
	GGAATCCCATTCACAAGGAG+TGG	+	chr8.2:10975049-10975068	None:intergenic	50.0%
	GGCTTCTGCAGTTGCATCTT+CGG	-	chr8.2:10974439-10974458	MS.gene041542:CDS	50.0%
	TCTCAAGTTCACCGTTACGG+AGG	-	chr8.2:10974591-10974610	MS.gene041542:CDS	50.0%
!!	ACGGTGAACTTGAGAGCGTT+AGG	+	chr8.2:10974586-10974605	None:intergenic	50.0%
!!	GGCTGCTTTAGAAGCTGTTG+CGG	-	chr8.2:10974460-10974479	MS.gene041542:CDS	50.0%
	GACGCACGATAAGCCAGAAG+AGG	+	chr8.2:10974564-10974583	None:intergenic	55.0%
!	GTCTCGTTGGTGGGATGGAA+GGG	+	chr8.2:10974390-10974409	None:intergenic	55.0%
	AGAAGCCACAGCCGGCATTG+TGG	+	chr8.2:10974426-10974445	None:intergenic	60.0%
	GCAACTGCAGAAGCCACAGC+CGG	+	chr8.2:10974434-10974453	None:intergenic	60.0%
	TCCCACCAACGAGACCACCA+AGG	-	chr8.2:10974395-10974414	MS.gene041542:CDS	60.0%
!	GCCTTGGTGGTCTCGTTGGT+GGG	+	chr8.2:10974399-10974418	None:intergenic	60.0%
!	GGTCTCGTTGGTGGGATGGA+AGG	+	chr8.2:10974391-10974410	None:intergenic	60.0%
!	TGGTGGTCTCGTTGGTGGGA+TGG	+	chr8.2:10974395-10974414	None:intergenic	60.0%
	CCAAGGCGACGCCACAATGC+CGG	-	chr8.2:10974412-10974431	MS.gene041542:CDS	65.0%
	GCATTGTGGCGTCGCCTTGG+TGG	+	chr8.2:10974412-10974431	None:intergenic	65.0%
!	CGCCTTGGTGGTCTCGTTGG+TGG	+	chr8.2:10974400-10974419	None:intergenic	65.0%
!	CGTCGCCTTGGTGGTCTCGT+TGG	+	chr8.2:10974403-10974422	None:intergenic	65.0%
	CCGGCATTGTGGCGTCGCCT+TGG	+	chr8.2:10974415-10974434	None:intergenic	70.0%
!	CGACGCCACAATGCCGGCTG+TGG	-	chr8.2:10974418-10974437	MS.gene041542:CDS	70.0%

Chromosome	Type	Strat	End	Strand	Name
chr8.2	gene	10974352	10975092	10974352	ID=MS.gene041542
chr8.2	mRNA	10974352	10975092	10974352	ID=MS.gene041542.t1;Parent=MS.gene041542
chr8.2	exon	10974352	10975092	10974352	ID=MS.gene041542.t1.exon1;Parent=MS.gene041542.t1
chr8.2	CDS	10974352	10975092	10974352	ID=cds.MS.gene041542.t1;Parent=MS.gene041542.t1

Gene Sequence

>MS.gene041542

ATGGCCGATCATCAACTTAATGGCGCTCACTATGGCCCTTCCATCCCACCAACGAGACCACCAAGGCGACGCCACAATGCCGGCTGTGGCTTCTGCAGTTGCATCTTCGGCTGCTTTAGAAGCTGTTGCGGCTGCATGTTCAACTGCATTTTAAGCCTAATTTGCAGAATCATAGCCACTATCATCATCTTGGTGGCAATCGTTGGTTTCCTCTTCTGGCTTATCGTGCGTCCTAACGCTCTCAAGTTCACCGTTACGGAGGCATCACTTGCTCAATTCAATTTCACAAACAACAACACACTTCAGTATGATCTTTTCGTCAATCTCACGATCAGAAACCCTAATAGAAGAGTTGGTGTCTATTACAATGACATAGAAACACTTTCGTTCTACAAAGATGTTAGGTTTGGTACTCAAACCCTAGGAAAATTCTTTCAACCTCATAAGAATACAAGCATTTTGAATCCTGTTTTTAAAGGACAACAAGTGATTCCTTTGAGTTCAAGTCAGATTTCGGAGTTCAATAAGGAGACGAACAATGGGGTTTATGGAATTAATTTGAAGGTTTTGCTTAATGTTAGGTTTGCCTTGGGTTTGATCAAGACAGGGAATTTGAAACAAAACCATCATTGTGATTTGAAGGTTCCTTTGAAATCAAACAATGGAACTTCTTCTTTGGGTAATGGATTTCAAGCCACTCCTTGTGAATGGGATTCCAAATGGAGGTTGTTGTTCCGTTAG

Protein sequence

>MS.gene041542.t1

MADHQLNGAHYGPSIPPTRPPRRRHNAGCGFCSCIFGCFRSCCGCMFNCILSLICRIIATIIILVAIVGFLFWLIVRPNALKFTVTEASLAQFNFTNNNTLQYDLFVNLTIRNPNRRVGVYYNDIETLSFYKDVRFGTQTLGKFFQPHKNTSILNPVFKGQQVIPLSSSQISEFNKETNNGVYGINLKVLLNVRFALGLIKTGNLKQNHHCDLKVPLKSNNGTSSLGNGFQATPCEWDSKWRLLFR