Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene04196.t1 | RHN67403.1 | 86.1 | 467 | 61 | 3 | 1 | 466 | 1 | 464 | 5.70E-141 | 511.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene04196.t1 | Q03250 | 37.8 | 74 | 46 | 0 | 188 | 261 | 11 | 84 | 2.7e-06 | 55.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene04196.t1 | A0A072UW74 | 86.1 | 467 | 61 | 3 | 1 | 466 | 1 | 464 | 4.1e-141 | 511.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene04196 | MS.gene04368 | PPI |
| MS.gene04196 | MS.gene04128 | PPI |
| MS.gene028868 | MS.gene04196 | PPI |
| MS.gene04196 | MS.gene53789 | PPI |
| MS.gene04196 | MS.gene055778 | PPI |
| MS.gene05721 | MS.gene04196 | PPI |
| MS.gene08073 | MS.gene04196 | PPI |
| MS.gene04196 | MS.gene043455 | PPI |
| MS.gene04196 | MS.gene39781 | PPI |
| MS.gene04196 | MS.gene31434 | PPI |
| MS.gene37608 | MS.gene04196 | PPI |
| MS.gene04196 | MS.gene47032 | PPI |
| MS.gene04196 | MS.gene016898 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene04196.t1 | MTR_3g058990 | 87.462 | 662 | 76 | 5 | 1 | 659 | 1 | 658 | 0.0 | 842 |
| MS.gene04196.t1 | MTR_3g059000 | 63.725 | 714 | 198 | 13 | 1 | 659 | 1 | 708 | 0.0 | 585 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene04196.t1 | AT5G55670 | 48.456 | 745 | 263 | 22 | 1 | 659 | 1 | 710 | 4.01e-158 | 472 |
| MS.gene04196.t1 | AT5G55670 | 43.779 | 434 | 150 | 13 | 1 | 367 | 1 | 407 | 1.17e-72 | 246 |
| MS.gene04196.t1 | AT5G55670 | 56.614 | 189 | 66 | 4 | 480 | 659 | 404 | 585 | 1.13e-42 | 163 |
| MS.gene04196.t1 | AT1G13190 | 35.614 | 643 | 284 | 31 | 1 | 586 | 1 | 570 | 8.43e-66 | 227 |
Find 275 sgRNAs with CRISPR-Local
Find 307 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAGGGTGCCGGTGGGATTTC+TGG | -0.012788 | 3.3:-48316917 | MS.gene04196:CDS |
| TCCTTATACTGTTAAGAAAA+TGG | 0.192681 | 3.3:-48316387 | MS.gene04196:CDS |
| GTTGGGTTGCAGGGGATTAT+TGG | 0.203190 | 3.3:-48316773 | MS.gene04196:CDS |
| CCGCCCCATCCACCCATATT+TGG | 0.219830 | 3.3:+48315771 | None:intergenic |
| GTGTTCAAGGAGGTGGGATT+AGG | 0.221569 | 3.3:-48316859 | MS.gene04196:CDS |
| AGGTATGGATGGTCCTAATA+TGG | 0.242127 | 3.3:-48315808 | MS.gene04196:CDS |
| TGATACTGGTGTTGGGTTGC+AGG | 0.246610 | 3.3:-48316783 | MS.gene04196:CDS |
| GGGCGTGTTGGTGGAGGAAG+TGG | 0.256014 | 3.3:-48316668 | MS.gene04196:CDS |
| CACGATTCCTTCTTTCTTCA+AGG | 0.264146 | 3.3:+48315517 | None:intergenic |
| GGTGGGATTAGGGTTGAATT+AGG | 0.265479 | 3.3:-48316848 | MS.gene04196:CDS |
| ATGAATGGTCATTTATTTAA+TGG | 0.265989 | 3.3:-48316437 | MS.gene04196:CDS |
| CCCTGGTTCGGCACGGCAGT+TGG | 0.280516 | 3.3:+48316329 | None:intergenic |
| TGGGAGAGGCTTTGAATAAT+AGG | 0.286858 | 3.3:-48316367 | MS.gene04196:CDS |
| GAGGTAGTGGAAGAGGTAAT+TGG | 0.305315 | 3.3:-48316178 | MS.gene04196:CDS |
| CTTGAGTGGGATTGGGGAAC+AGG | 0.305403 | 3.3:-48316810 | MS.gene04196:CDS |
| AGGGTGCCGGTGGGATTTCT+GGG | 0.306861 | 3.3:-48316916 | MS.gene04196:CDS |
| GAAGCTGAGCTTTGTAAGTA+TGG | 0.309921 | 3.3:-48316569 | MS.gene04196:CDS |
| GTGGACTACTGATGCTGATT+TGG | 0.311171 | 3.3:-48316591 | MS.gene04196:CDS |
| TGTTCAAGGAGGTGGGATTA+GGG | 0.312237 | 3.3:-48316858 | MS.gene04196:CDS |
| TTGGGTTGCAGGGGATTATT+GGG | 0.324035 | 3.3:-48316772 | MS.gene04196:CDS |
| TCTAGAAAAGAATCTGATTA+TGG | 0.324934 | 3.3:-48315243 | MS.gene04196:CDS |
| TCCGGCCACATTCCCATATT+AGG | 0.337509 | 3.3:+48315795 | None:intergenic |
| GGGGAACAGGGTGGTGATAC+TGG | 0.338010 | 3.3:-48316797 | MS.gene04196:CDS |
| AGGAGAGGACCTGCTGAGGC+TGG | 0.347954 | 3.3:-48316305 | MS.gene04196:CDS |
| ATGGTAATCCGATGAGGAAT+AGG | 0.351126 | 3.3:-48316118 | MS.gene04196:CDS |
| GGGAGAGGGGACGATCTTCT+AGG | 0.353899 | 3.3:-48315311 | MS.gene04196:CDS |
| GCGTGTTGGTGGAGGAAGTG+GGG | 0.354248 | 3.3:-48316666 | MS.gene04196:CDS |
| GGTAATGCTGGAAATGGATA+TGG | 0.354522 | 3.3:-48316065 | MS.gene04196:CDS |
| CTGCTACCTTGAGTGGGATT+GGG | 0.355320 | 3.3:-48316817 | MS.gene04196:CDS |
| AGGTAGTGGAAGAGGTAATT+GGG | 0.355953 | 3.3:-48316177 | MS.gene04196:CDS |
| GGGATGCATATGAATGGTAT+AGG | 0.358177 | 3.3:-48315846 | MS.gene04196:CDS |
| GGCGTGTTGGTGGAGGAAGT+GGG | 0.358700 | 3.3:-48316667 | MS.gene04196:CDS |
| AATGTGGCCGGATCCAAATA+TGG | 0.361260 | 3.3:-48315784 | MS.gene04196:CDS |
| TTCGTAATCTTCATCTTCTT+CGG | 0.361435 | 3.3:+48317090 | None:intergenic |
| CCTGGTTCGGCACGGCAGTT+GGG | 0.372146 | 3.3:+48316330 | None:intergenic |
| CAACCACCAGTTGGGGTTGG+TGG | 0.373191 | 3.3:-48316740 | MS.gene04196:CDS |
| TTTAGCTACAACTGCTTGTA+AGG | 0.375789 | 3.3:-48316465 | MS.gene04196:CDS |
| CCCTGAGCTGTCAGCGGTGG+TGG | 0.381103 | 3.3:+48316935 | None:intergenic |
| CGTCGCCGACGATGGTTTCA+TGG | 0.388823 | 3.3:-48317113 | MS.gene04196:CDS |
| AGTGGCAACGGCGGTGGTGG+CGG | 0.391147 | 3.3:+48316965 | None:intergenic |
| GGCAGTGGCAACGGCGGTGG+TGG | 0.394554 | 3.3:+48316962 | None:intergenic |
| TTAGGCCAACCAGCTCTATC+AGG | 0.396683 | 3.3:+48315666 | None:intergenic |
| GTGGGATTAGGGTTGAATTA+GGG | 0.399065 | 3.3:-48316847 | MS.gene04196:CDS |
| AATAATAATATTAGAGGTAG+TGG | 0.401379 | 3.3:-48316191 | MS.gene04196:CDS |
| GATACTGGTGTTGGGTTGCA+GGG | 0.404033 | 3.3:-48316782 | MS.gene04196:CDS |
| AACAGCAGCAACCACCAGTT+GGG | 0.404217 | 3.3:-48316748 | MS.gene04196:CDS |
| AGCGGTGGTGGTGGCGGCAG+TGG | 0.404587 | 3.3:+48316947 | None:intergenic |
| TGGTAATCCGATGAGGAATA+GGG | 0.404831 | 3.3:-48316117 | MS.gene04196:CDS |
| TCAAAACCCGGATGCATCAT+AGG | 0.407846 | 3.3:+48316020 | None:intergenic |
| CCCTTTCGCGGTCACGATCA+TGG | 0.410056 | 3.3:+48315436 | None:intergenic |
| GGAGGGGTTAAGCCGGGTGG+TGG | 0.410967 | 3.3:-48316284 | MS.gene04196:CDS |
| CCTTCATTTGGTGGTCCCAT+TGG | 0.412566 | 3.3:-48315996 | MS.gene04196:CDS |
| TTGTGGGTGATTTGCATTGG+TGG | 0.413664 | 3.3:-48316610 | MS.gene04196:CDS |
| GGCGGCAGTGGCAACGGCGG+TGG | 0.414955 | 3.3:+48316959 | None:intergenic |
| CAGCAGGTCCTCTCCTTCCC+TGG | 0.418269 | 3.3:+48316312 | None:intergenic |
| CCTTATACTGTTAAGAAAAT+GGG | 0.419691 | 3.3:-48316386 | MS.gene04196:CDS |
| GAGGAATAGGGGAGGTGGGA+TGG | 0.423168 | 3.3:-48316105 | MS.gene04196:CDS |
| AGCGTGACCGTGAGCGTGAC+AGG | 0.424888 | 3.3:-48315407 | MS.gene04196:CDS |
| GGATGCATATGAATGGTATA+GGG | 0.425935 | 3.3:-48315845 | MS.gene04196:CDS |
| CCCAACTGCCGTGCCGAACC+AGG | 0.426612 | 3.3:-48316330 | MS.gene04196:CDS |
| AATAGGGGAGGTGGGATGGG+TGG | 0.428529 | 3.3:-48316101 | MS.gene04196:CDS |
| GCTGCTACCTTGAGTGGGAT+TGG | 0.428560 | 3.3:-48316818 | MS.gene04196:CDS |
| ATCGTGACCGCGAAAGGGGC+AGG | 0.430941 | 3.3:-48315431 | MS.gene04196:CDS |
| AAGCAGCAAACAATGTTAAT+CGG | 0.433245 | 3.3:+48315200 | None:intergenic |
| AACGAAAGTTCAAGGATGAT+AGG | 0.435216 | 3.3:-48315590 | MS.gene04196:CDS |
| AGGAATAGGGGAGGTGGGAT+GGG | 0.438994 | 3.3:-48316104 | MS.gene04196:CDS |
| TGAGGCTGGAGGGGTTAAGC+CGG | 0.439256 | 3.3:-48316291 | MS.gene04196:CDS |
| GGTGGTGGCGGCAGTGGCAA+CGG | 0.439345 | 3.3:+48316953 | None:intergenic |
| GGTCGAGTGGGTGGCTATGC+AGG | 0.440074 | 3.3:-48315975 | MS.gene04196:CDS |
| GGTCAAGGTGGGCGTGTTGG+TGG | 0.443401 | 3.3:-48316677 | MS.gene04196:CDS |
| GGAGGTGGGATGGGTGGTAG+AGG | 0.445989 | 3.3:-48316095 | MS.gene04196:CDS |
| AAACGGAGGCGTTGGGCCAC+CGG | 0.446183 | 3.3:+48315947 | None:intergenic |
| ACCACCACCGCTGACAGCTC+AGG | 0.446236 | 3.3:-48316936 | MS.gene04196:CDS |
| AGGAAGTACTGTATTGTTTG+TGG | 0.448264 | 3.3:-48316627 | MS.gene04196:CDS |
| TGGCCCGCCTATGATGCATC+CGG | 0.449024 | 3.3:-48316027 | MS.gene04196:CDS |
| ACAAAACCACCAACCCCAAC+TGG | 0.451082 | 3.3:+48316734 | None:intergenic |
| ATCATCCTTGAACTTTCGTT+CGG | 0.451431 | 3.3:+48315593 | None:intergenic |
| GGCACGGCAGTTGGGTTCAT+CGG | 0.453943 | 3.3:+48316338 | None:intergenic |
| ATGATTGGTAATGCTGGAAA+TGG | 0.454111 | 3.3:-48316071 | MS.gene04196:CDS |
| CAGGGTGGTGATACTGGTGT+TGG | 0.454512 | 3.3:-48316791 | MS.gene04196:CDS |
| TTACAAGCAGTTGTAGCTAA+AGG | 0.455788 | 3.3:+48316467 | None:intergenic |
| GGTCCTCTCCTTCCCTGGTT+CGG | 0.456096 | 3.3:+48316317 | None:intergenic |
| GTGACAGGCACAGGGAAGAC+AGG | 0.456868 | 3.3:-48315392 | MS.gene04196:CDS |
| CACGCTCCCTGCCCCTTTCG+CGG | 0.463242 | 3.3:+48315424 | None:intergenic |
| AGCCGGGTGGTGGTAACGTT+GGG | 0.463724 | 3.3:-48316274 | MS.gene04196:CDS |
| AATATTAGAGGTAGTGGAAG+AGG | 0.464352 | 3.3:-48316185 | MS.gene04196:CDS |
| ACCGTGAGCGTGACAGGCAC+AGG | 0.464655 | 3.3:-48315401 | MS.gene04196:CDS |
| GGTGGCTATGCAGGCTATCC+CGG | 0.469170 | 3.3:-48315966 | MS.gene04196:CDS |
| CGTGTTGGTGGAGGAAGTGG+GGG | 0.469677 | 3.3:-48316665 | MS.gene04196:CDS |
| GAAGTGGGTGTTCAAGGAGG+TGG | 0.470313 | 3.3:-48316866 | MS.gene04196:CDS |
| GGATGGGGCGGTGATGAACT+TGG | 0.471731 | 3.3:-48315759 | MS.gene04196:CDS |
| TACCCTGGCGTTGGTATGCA+TGG | 0.474635 | 3.3:-48315906 | MS.gene04196:CDS |
| TACCAGAAAACGGAGGCGTT+GGG | 0.474637 | 3.3:+48315940 | None:intergenic |
| AGAGGGAACAATCCTGGGAT+GGG | 0.479937 | 3.3:-48316152 | MS.gene04196:CDS |
| GCGAATGAAGTGGGTGTTCA+AGG | 0.480288 | 3.3:-48316872 | MS.gene04196:CDS |
| CAAGGTGGGCGTGTTGGTGG+AGG | 0.480776 | 3.3:-48316674 | MS.gene04196:CDS |
| AACGGAGGCGTTGGGCCACC+GGG | 0.480944 | 3.3:+48315948 | None:intergenic |
| ACCATGATCGTGACCGCGAA+AGG | 0.481425 | 3.3:-48315437 | MS.gene04196:CDS |
| TGTTTGTGGGTGATTTGCAT+TGG | 0.484112 | 3.3:-48316613 | MS.gene04196:CDS |
| GAGGGAACAATCCTGGGATG+GGG | 0.485801 | 3.3:-48316151 | MS.gene04196:CDS |
| AGGTTGCAGAGTCAAGTTAT+GGG | 0.486411 | 3.3:-48315728 | MS.gene04196:CDS |
| TTAACCCCTCCAGCCTCAGC+AGG | 0.488064 | 3.3:+48316296 | None:intergenic |
| GGTGGTGGTAACGTTGGGAC+AGG | 0.489426 | 3.3:-48316269 | MS.gene04196:CDS |
| GAGGCTGGAGGGGTTAAGCC+GGG | 0.490666 | 3.3:-48316290 | MS.gene04196:CDS |
| GCCGCATCTGACCATCAGTA+TGG | 0.490857 | 3.3:-48315699 | MS.gene04196:CDS |
| CCCTGTGCCTGTCACGCTCA+CGG | 0.493425 | 3.3:+48315400 | None:intergenic |
| AGAGGTATGATTGGTAATGC+TGG | 0.493763 | 3.3:-48316077 | MS.gene04196:CDS |
| AAGAATCTGATTATGGAAAG+AGG | 0.493864 | 3.3:-48315236 | MS.gene04196:CDS |
| AGGGTGGTGATACTGGTGTT+GGG | 0.495260 | 3.3:-48316790 | MS.gene04196:CDS |
| GCTACAACTGCTTGTAAGGA+AGG | 0.495643 | 3.3:-48316461 | MS.gene04196:CDS |
| AATCCTGGGATGGGGAATAG+AGG | 0.496321 | 3.3:-48316143 | MS.gene04196:CDS |
| AAGGTTGCAGAGTCAAGTTA+TGG | 0.496773 | 3.3:-48315729 | MS.gene04196:CDS |
| AGAGGACCTGCTGAGGCTGG+AGG | 0.497491 | 3.3:-48316302 | MS.gene04196:CDS |
| GGTAACTACCAAGGTGGAGA+TGG | 0.498265 | 3.3:-48316245 | MS.gene04196:CDS |
| GAATCGTGATGATAGAGAGA+TGG | 0.499275 | 3.3:-48315502 | MS.gene04196:CDS |
| CTTTACAACGATGTTAATGT+TGG | 0.501235 | 3.3:-48317064 | MS.gene04196:CDS |
| GGCGGGCCAGCACCAATACC+AGG | 0.504684 | 3.3:+48316041 | None:intergenic |
| AATGGATATGGACCTGGTAT+TGG | 0.508101 | 3.3:-48316053 | MS.gene04196:CDS |
| TATGGACCTGGTATTGGTGC+TGG | 0.509297 | 3.3:-48316047 | MS.gene04196:CDS |
| GAGGACCTGCTGAGGCTGGA+GGG | 0.509505 | 3.3:-48316301 | MS.gene04196:CDS |
| GATGATCCCACCATCAGGTA+TGG | 0.510864 | 3.3:-48315823 | MS.gene04196:CDS |
| ATAGAGGATCAGAGAGGGAC+TGG | 0.511140 | 3.3:-48315626 | MS.gene04196:CDS |
| CTGACAGCTCAGGGTGCCGG+TGG | 0.511262 | 3.3:-48316926 | MS.gene04196:CDS |
| TAGCCACCCACTCGACCAAT+GGG | 0.511433 | 3.3:+48315981 | None:intergenic |
| TACTGTTAAGAAAATGGGAG+AGG | 0.512487 | 3.3:-48316381 | MS.gene04196:CDS |
| GGATCCAAATATGGGTGGAT+GGG | 0.513727 | 3.3:-48315775 | MS.gene04196:CDS |
| CTCACCACATGATGATGAAT+GGG | 0.516400 | 3.3:-48315331 | MS.gene04196:CDS |
| AGATGGGACGAGAACGGTCT+CGG | 0.516660 | 3.3:-48315485 | MS.gene04196:CDS |
| CATCCACCCATATTTGGATC+CGG | 0.517109 | 3.3:+48315777 | None:intergenic |
| AAGTGGGTGTTCAAGGAGGT+GGG | 0.517816 | 3.3:-48316865 | MS.gene04196:CDS |
| ATGTGGCCGGATCCAAATAT+GGG | 0.518251 | 3.3:-48315783 | MS.gene04196:CDS |
| CCAAATATGGGTGGATGGGG+CGG | 0.518434 | 3.3:-48315771 | MS.gene04196:CDS |
| GATCCAAATATGGGTGGATG+GGG | 0.519015 | 3.3:-48315774 | MS.gene04196:CDS |
| ATGGTCATTTATTTAATGGT+AGG | 0.519190 | 3.3:-48316433 | MS.gene04196:CDS |
| ATAGGGATGATCCCACCATC+AGG | 0.519467 | 3.3:-48315828 | MS.gene04196:CDS |
| GGAAGTACTGTATTGTTTGT+GGG | 0.520117 | 3.3:-48316626 | MS.gene04196:CDS |
| TACTTCCGAACGAAAGTTCA+AGG | 0.520160 | 3.3:-48315598 | MS.gene04196:CDS |
| GCTGTCAGCGGTGGTGGTGG+CGG | 0.520375 | 3.3:+48316941 | None:intergenic |
| TGAGCTGTCAGCGGTGGTGG+TGG | 0.521383 | 3.3:+48316938 | None:intergenic |
| GGTATGCTGCCTTCATACCC+TGG | 0.522652 | 3.3:-48315921 | MS.gene04196:CDS |
| GATGGGACGAGAACGGTCTC+GGG | 0.522737 | 3.3:-48315484 | MS.gene04196:CDS |
| GCTGGAGGGGTTAAGCCGGG+TGG | 0.522844 | 3.3:-48316287 | MS.gene04196:CDS |
| ATACCAGAAAACGGAGGCGT+TGG | 0.523188 | 3.3:+48315939 | None:intergenic |
| GGCCCGCCTATGATGCATCC+GGG | 0.524002 | 3.3:-48316026 | MS.gene04196:CDS |
| GGTATGGATGGTCCTAATAT+GGG | 0.524570 | 3.3:-48315807 | MS.gene04196:CDS |
| CCGCTGACAGCTCAGGGTGC+CGG | 0.524747 | 3.3:-48316929 | MS.gene04196:CDS |
| AAGCCGGGTGGTGGTAACGT+TGG | 0.525484 | 3.3:-48316275 | MS.gene04196:CDS |
| GGAAGAGGGATGCATATGAA+TGG | 0.526559 | 3.3:-48315852 | MS.gene04196:CDS |
| GTAGCACCTCATGTTAATCC+TGG | 0.530218 | 3.3:-48315882 | MS.gene04196:CDS |
| GACATGACCTTGAAGAAAGA+AGG | 0.530426 | 3.3:-48315524 | MS.gene04196:CDS |
| CCGATGAGGAATAGGGGAGG+TGG | 0.532579 | 3.3:-48316110 | MS.gene04196:CDS |
| CGGATCCAAATATGGGTGGA+TGG | 0.533015 | 3.3:-48315776 | MS.gene04196:CDS |
| AACGATGTTAATGTTGGTGA+GGG | 0.535233 | 3.3:-48317058 | MS.gene04196:CDS |
| GCTTGTAAGGAAGGGATGAA+TGG | 0.535310 | 3.3:-48316452 | MS.gene04196:CDS |
| ATACTGGTGTTGGGTTGCAG+GGG | 0.535555 | 3.3:-48316781 | MS.gene04196:CDS |
| ATGGACAAGTGAAGGAAGTG+AGG | 0.539678 | 3.3:-48316550 | MS.gene04196:CDS |
| TCCTAATATGGGAATGTGGC+CGG | 0.540113 | 3.3:-48315796 | MS.gene04196:CDS |
| TGCTACCTTGAGTGGGATTG+GGG | 0.542143 | 3.3:-48316816 | MS.gene04196:CDS |
| ACTCACCACATGATGATGAA+TGG | 0.543564 | 3.3:-48315332 | MS.gene04196:CDS |
| CCATGATCGTGACCGCGAAA+GGG | 0.543852 | 3.3:-48315436 | MS.gene04196:CDS |
| CAAGGTCAAGGTGGGCGTGT+TGG | 0.547163 | 3.3:-48316680 | MS.gene04196:CDS |
| TTGAGTGGGATTGGGGAACA+GGG | 0.547331 | 3.3:-48316809 | MS.gene04196:CDS |
| CTGCCTTCATACCCTGGCGT+TGG | 0.547967 | 3.3:-48315915 | MS.gene04196:CDS |
| CAACGATGTTAATGTTGGTG+AGG | 0.548295 | 3.3:-48317059 | MS.gene04196:CDS |
| CTGCCGTGCCGAACCAGGGA+AGG | 0.551571 | 3.3:-48316325 | MS.gene04196:CDS |
| GGTGGTCCCATTGGTCGAGT+GGG | 0.552959 | 3.3:-48315987 | MS.gene04196:CDS |
| CGGATATAGCTTCGTTGCGG+TGG | 0.553191 | 3.3:+48317137 | None:intergenic |
| GAAGGCAGCATACCAGAAAA+CGG | 0.553868 | 3.3:+48315930 | None:intergenic |
| CACATGATGATGAATGGGAG+AGG | 0.555949 | 3.3:-48315326 | MS.gene04196:CDS |
| ACGAAAGTTCAAGGATGATA+GGG | 0.556120 | 3.3:-48315589 | MS.gene04196:CDS |
| CAACAGCAGCAACCACCAGT+TGG | 0.557553 | 3.3:-48316749 | MS.gene04196:CDS |
| AATCGTGATGATAGAGAGAT+GGG | 0.558482 | 3.3:-48315501 | MS.gene04196:CDS |
| CATGAAACCATCGTCGGCGA+CGG | 0.558519 | 3.3:+48317114 | None:intergenic |
| CCAATGGGACCACCAAATGA+AGG | 0.559437 | 3.3:+48315996 | None:intergenic |
| ATACCAACGCCAGGGTATGA+AGG | 0.560034 | 3.3:+48315912 | None:intergenic |
| AGGATCAGAGAGGGACTGGT+CGG | 0.560796 | 3.3:-48315622 | MS.gene04196:CDS |
| GGATCAGAGAGGGACTGGTC+GGG | 0.561883 | 3.3:-48315621 | MS.gene04196:CDS |
| ATGGGTGGTAGAGGTATGAT+TGG | 0.562333 | 3.3:-48316086 | MS.gene04196:CDS |
| CTCGAGATCTTGCACGATCA+CGG | 0.563600 | 3.3:+48315460 | None:intergenic |
| GTCCCAACGTTACCACCACC+CGG | 0.563624 | 3.3:+48316272 | None:intergenic |
| CCACCTCCCCTATTCCTCAT+CGG | 0.563733 | 3.3:+48316110 | None:intergenic |
| GGCGGTGATGAACTTGGTGG+TGG | 0.565264 | 3.3:-48315753 | MS.gene04196:CDS |
| AACCCGGATGCATCATAGGC+GGG | 0.565290 | 3.3:+48316024 | None:intergenic |
| GAGAGGGAACAATCCTGGGA+TGG | 0.567145 | 3.3:-48316153 | MS.gene04196:CDS |
| ACTCCATGCATACCAACGCC+AGG | 0.567317 | 3.3:+48315903 | None:intergenic |
| AGGACCTGCTGAGGCTGGAG+GGG | 0.567841 | 3.3:-48316300 | MS.gene04196:CDS |
| GGTGGTAACGTTGGGACAGG+TGG | 0.568635 | 3.3:-48316266 | MS.gene04196:CDS |
| GAAACCATCGTCGGCGACGG+CGG | 0.569379 | 3.3:+48317117 | None:intergenic |
| CTCTCCCATTCATCATCATG+TGG | 0.570942 | 3.3:+48315327 | None:intergenic |
| GTAACTACCAAGGTGGAGAT+GGG | 0.571158 | 3.3:-48316244 | MS.gene04196:CDS |
| CTGATTATGGAAAGAGGAGG+CGG | 0.572300 | 3.3:-48315230 | MS.gene04196:CDS |
| ATCCCACCATCAGGTATGGA+TGG | 0.572882 | 3.3:-48315819 | MS.gene04196:CDS |
| GGTCCCATTGGTCGAGTGGG+TGG | 0.575180 | 3.3:-48315984 | MS.gene04196:CDS |
| ATAGCCACCCACTCGACCAA+TGG | 0.575918 | 3.3:+48315980 | None:intergenic |
| TGACAGGCACAGGGAAGACA+GGG | 0.576617 | 3.3:-48315391 | MS.gene04196:CDS |
| GGTAGTGGAAGAGGTAATTG+GGG | 0.578149 | 3.3:-48316176 | MS.gene04196:CDS |
| CCACCACCGCTGACAGCTCA+GGG | 0.579224 | 3.3:-48316935 | MS.gene04196:CDS |
| TATTATTCCCATCTCCACCT+TGG | 0.580443 | 3.3:+48316237 | None:intergenic |
| TGTCCTCTATTCCCCATCCC+AGG | 0.582019 | 3.3:+48316140 | None:intergenic |
| GGTGGCGGCAGTGGCAACGG+CGG | 0.582078 | 3.3:+48316956 | None:intergenic |
| ATATCCGCCGTCGCCGACGA+TGG | 0.582224 | 3.3:-48317121 | MS.gene04196:CDS |
| CATGATCGTGACCGCGAAAG+GGG | 0.586050 | 3.3:-48315435 | MS.gene04196:CDS |
| GAAATCGAAAGGGTACTGTC+AGG | 0.586712 | 3.3:-48316504 | MS.gene04196:CDS |
| AAAGCTAGTGGGAAATCGAA+AGG | 0.587476 | 3.3:-48316515 | MS.gene04196:CDS |
| TGGTGGTCCCATTGGTCGAG+TGG | 0.588922 | 3.3:-48315988 | MS.gene04196:CDS |
| TTGTAAGTATGGACAAGTGA+AGG | 0.589535 | 3.3:-48316558 | MS.gene04196:CDS |
| TCGTGACCGCGAAAGGGGCA+GGG | 0.592510 | 3.3:-48315430 | MS.gene04196:CDS |
| GGGAAGGAGAGGACCTGCTG+AGG | 0.593606 | 3.3:-48316309 | MS.gene04196:CDS |
| GCACCCTGAGCTGTCAGCGG+TGG | 0.598668 | 3.3:+48316932 | None:intergenic |
| CTACAACTGCTTGTAAGGAA+GGG | 0.599474 | 3.3:-48316460 | MS.gene04196:CDS |
| CATCATCATGTGGTGAGTCA+CGG | 0.599582 | 3.3:+48315337 | None:intergenic |
| GACCATCCATACCTGATGGT+GGG | 0.600120 | 3.3:+48315817 | None:intergenic |
| TGACAGCTCAGGGTGCCGGT+GGG | 0.601705 | 3.3:-48316925 | MS.gene04196:CDS |
| GTGCCGAACCAGGGAAGGAG+AGG | 0.601927 | 3.3:-48316320 | MS.gene04196:CDS |
| TGATGAACTTGGTGGTGGCA+AGG | 0.603803 | 3.3:-48315748 | MS.gene04196:CDS |
| CGATGAGGAATAGGGGAGGT+GGG | 0.604019 | 3.3:-48316109 | MS.gene04196:CDS |
| CCAACTGCCGTGCCGAACCA+GGG | 0.605013 | 3.3:-48316329 | MS.gene04196:CDS |
| ACATGATGATGAATGGGAGA+GGG | 0.605154 | 3.3:-48315325 | MS.gene04196:CDS |
| AAAAGATAGAGGATCAGAGA+GGG | 0.607806 | 3.3:-48315631 | MS.gene04196:CDS |
| GAGCTTGTAGCGAATGAAGT+GGG | 0.609124 | 3.3:-48316881 | MS.gene04196:CDS |
| TCTCCTTCCCTGGTTCGGCA+CGG | 0.609224 | 3.3:+48316322 | None:intergenic |
| GATTCACCTCACCATACTGA+TGG | 0.610696 | 3.3:+48315688 | None:intergenic |
| CTGTTCCCCAATCCCACTCA+AGG | 0.613074 | 3.3:+48316811 | None:intergenic |
| TGATGAGACAAGGTCAAGGT+GGG | 0.614245 | 3.3:-48316688 | MS.gene04196:CDS |
| CAGCAACCACCAGTTGGGGT+TGG | 0.614997 | 3.3:-48316743 | MS.gene04196:CDS |
| ATGGACGAAGACGGAGGGCA+CGG | 0.616271 | 3.3:-48317172 | MS.gene04196:CDS |
| CCGGCACCCTGAGCTGTCAG+CGG | 0.619766 | 3.3:+48316929 | None:intergenic |
| GGACCATCCATACCTGATGG+TGG | 0.619938 | 3.3:+48315816 | None:intergenic |
| AAGCTAGTGGGAAATCGAAA+GGG | 0.620489 | 3.3:-48316514 | MS.gene04196:CDS |
| TGCAGAGTCAAGTTATGGGG+AGG | 0.620724 | 3.3:-48315724 | MS.gene04196:CDS |
| CCAAATGAAGGATCAAAACC+CGG | 0.622976 | 3.3:+48316008 | None:intergenic |
| AACCCTAGAATGGACGAAGA+CGG | 0.626102 | 3.3:-48317181 | None:intergenic |
| CCGTGAGCGTGACAGGCACA+GGG | 0.629238 | 3.3:-48315400 | MS.gene04196:CDS |
| ACGATTATCAACACATGAGG+AGG | 0.629599 | 3.3:-48315274 | MS.gene04196:CDS |
| ACAGCAGCAACCACCAGTTG+GGG | 0.630307 | 3.3:-48316747 | MS.gene04196:CDS |
| TTAGGACCATCCATACCTGA+TGG | 0.634109 | 3.3:+48315813 | None:intergenic |
| CATGATGATGAATGGGAGAG+GGG | 0.637097 | 3.3:-48315324 | MS.gene04196:CDS |
| ATAGAGAGATGGGACGAGAA+CGG | 0.638074 | 3.3:-48315491 | MS.gene04196:CDS |
| TGGGGCGGTGATGAACTTGG+TGG | 0.638251 | 3.3:-48315756 | MS.gene04196:CDS |
| GGTAATCCGATGAGGAATAG+GGG | 0.641229 | 3.3:-48316116 | MS.gene04196:CDS |
| AGAGCTTGTAGCGAATGAAG+TGG | 0.645421 | 3.3:-48316882 | MS.gene04196:CDS |
| CTAGAATGGACGAAGACGGA+GGG | 0.646038 | 3.3:-48317177 | None:intergenic |
| ATCTGACCATCAGTATGGTG+AGG | 0.649942 | 3.3:-48315694 | MS.gene04196:CDS |
| ACCATACTGATGGTCAGATG+CGG | 0.650323 | 3.3:+48315698 | None:intergenic |
| CAGCAAACAATGTTAATCGG+AGG | 0.650764 | 3.3:+48315203 | None:intergenic |
| AAACCACCAACCCCAACTGG+TGG | 0.650926 | 3.3:+48316737 | None:intergenic |
| GGCTATGCAGGCTATCCCGG+TGG | 0.651990 | 3.3:-48315963 | MS.gene04196:CDS |
| TGAATCCTGATAGAGCTGGT+TGG | 0.652170 | 3.3:-48315671 | MS.gene04196:CDS |
| GAGGTGAATCCTGATAGAGC+TGG | 0.653437 | 3.3:-48315675 | MS.gene04196:CDS |
| AGTGGGATTGGGGAACAGGG+TGG | 0.653460 | 3.3:-48316806 | MS.gene04196:CDS |
| TTGATGAGACAAGGTCAAGG+TGG | 0.653907 | 3.3:-48316689 | MS.gene04196:CDS |
| GGGATGGGGAATAGAGGACA+TGG | 0.659072 | 3.3:-48316137 | MS.gene04196:CDS |
| GGTTGCAGAGTCAAGTTATG+GGG | 0.660062 | 3.3:-48315727 | MS.gene04196:CDS |
| ATCACGATTATCAACACATG+AGG | 0.664539 | 3.3:-48315277 | MS.gene04196:CDS |
| AAACCCGGATGCATCATAGG+CGG | 0.669125 | 3.3:+48316023 | None:intergenic |
| GCTGGAAATGGATATGGACC+TGG | 0.670595 | 3.3:-48316059 | MS.gene04196:CDS |
| TTCGGCCATGAAACCATCGT+CGG | 0.674416 | 3.3:+48317108 | None:intergenic |
| CTCCATGCATACCAACGCCA+GGG | 0.674480 | 3.3:+48315904 | None:intergenic |
| TGGCCGGATCCAAATATGGG+TGG | 0.678426 | 3.3:-48315780 | MS.gene04196:CDS |
| CCTAGAATGGACGAAGACGG+AGG | 0.678701 | 3.3:-48317178 | None:intergenic |
| CTGAAACCCAGAAATCCCAC+CGG | 0.682743 | 3.3:+48316910 | None:intergenic |
| GGGACAGGTGGTAACTACCA+AGG | 0.686672 | 3.3:-48316254 | MS.gene04196:CDS |
| AATGAAGTGGGTGTTCAAGG+AGG | 0.691246 | 3.3:-48316869 | MS.gene04196:CDS |
| GAGGACATGGTAATCCGATG+AGG | 0.691280 | 3.3:-48316124 | MS.gene04196:CDS |
| GTAGTGGAAGAGGTAATTGG+GGG | 0.705090 | 3.3:-48316175 | MS.gene04196:CDS |
| CGGCGGATATAGCTTCGTTG+CGG | 0.707556 | 3.3:+48317134 | None:intergenic |
| TTCGCATAAGATACAACACA+CGG | 0.715974 | 3.3:+48316410 | None:intergenic |
| ATGGTCCTAATATGGGAATG+TGG | 0.718453 | 3.3:-48315800 | MS.gene04196:CDS |
| AATGATGGGTTGATGAGACA+AGG | 0.719669 | 3.3:-48316698 | MS.gene04196:CDS |
| GACGAAGACGGAGGGCACGG+TGG | 0.722917 | 3.3:-48317169 | MS.gene04196:CDS |
| ACAGGTGGTAACTACCAAGG+TGG | 0.723879 | 3.3:-48316251 | MS.gene04196:CDS |
| AATCCGATGAGGAATAGGGG+AGG | 0.734906 | 3.3:-48316113 | MS.gene04196:CDS |
| GGGTTGATGAGACAAGGTCA+AGG | 0.736847 | 3.3:-48316692 | MS.gene04196:CDS |
| AATCTGATTATGGAAAGAGG+AGG | 0.755236 | 3.3:-48315233 | MS.gene04196:CDS |
| GGCAGCATACCAGAAAACGG+AGG | 0.758901 | 3.3:+48315933 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATAATAATATTAGAGGTAG+TGG | - | chr3.3:48316196-48316215 | MS.gene04196:CDS | 20.0% |
| !! | ATGAATGGTCATTTATTTAA+TGG | - | chr3.3:48315950-48315969 | MS.gene04196:CDS | 20.0% |
| ! | ATGGTCATTTATTTAATGGT+AGG | - | chr3.3:48315954-48315973 | MS.gene04196:CDS | 25.0% |
| ! | CCTTATACTGTTAAGAAAAT+GGG | - | chr3.3:48316001-48316020 | MS.gene04196:CDS | 25.0% |
| ! | TCCTTATACTGTTAAGAAAA+TGG | - | chr3.3:48316000-48316019 | MS.gene04196:CDS | 25.0% |
| ! | TCTAGAAAAGAATCTGATTA+TGG | - | chr3.3:48317144-48317163 | MS.gene04196:CDS | 25.0% |
| AAGAATCTGATTATGGAAAG+AGG | - | chr3.3:48317151-48317170 | MS.gene04196:CDS | 30.0% | |
| CTTTACAACGATGTTAATGT+TGG | - | chr3.3:48315323-48315342 | MS.gene04196:CDS | 30.0% | |
| TTCGTAATCTTCATCTTCTT+CGG | + | chr3.3:48315300-48315319 | None:intergenic | 30.0% | |
| ! | CCCATTTTCTTAACAGTATA+AGG | + | chr3.3:48316004-48316023 | None:intergenic | 30.0% |
| ! | TCTTTTTCTCTCATAGCATT+AGG | + | chr3.3:48316742-48316761 | None:intergenic | 30.0% |
| AAAAAGATAGAGGATCAGAG+AGG | - | chr3.3:48316755-48316774 | MS.gene04196:CDS | 35.0% | |
| AAAAAGCCAGGATTAACATG+AGG | + | chr3.3:48316514-48316533 | None:intergenic | 35.0% | |
| AAAAGATAGAGGATCAGAGA+GGG | - | chr3.3:48316756-48316775 | MS.gene04196:CDS | 35.0% | |
| AACGAAAGTTCAAGGATGAT+AGG | - | chr3.3:48316797-48316816 | MS.gene04196:CDS | 35.0% | |
| AATCGTGATGATAGAGAGAT+GGG | - | chr3.3:48316886-48316905 | MS.gene04196:CDS | 35.0% | |
| AATCTGATTATGGAAAGAGG+AGG | - | chr3.3:48317154-48317173 | MS.gene04196:CDS | 35.0% | |
| ACGAAAGTTCAAGGATGATA+GGG | - | chr3.3:48316798-48316817 | MS.gene04196:CDS | 35.0% | |
| ATCACGATTATCAACACATG+AGG | - | chr3.3:48317110-48317129 | MS.gene04196:CDS | 35.0% | |
| ATCATCCTTGAACTTTCGTT+CGG | + | chr3.3:48316797-48316816 | None:intergenic | 35.0% | |
| GCTATGAGAGAAAAAGATAG+AGG | - | chr3.3:48316745-48316764 | MS.gene04196:CDS | 35.0% | |
| GGATGCATATGAATGGTATA+GGG | - | chr3.3:48316542-48316561 | MS.gene04196:CDS | 35.0% | |
| TACTGTTAAGAAAATGGGAG+AGG | - | chr3.3:48316006-48316025 | MS.gene04196:CDS | 35.0% | |
| TTACAAGCAGTTGTAGCTAA+AGG | + | chr3.3:48315923-48315942 | None:intergenic | 35.0% | |
| TTCGCATAAGATACAACACA+CGG | + | chr3.3:48315980-48315999 | None:intergenic | 35.0% | |
| TTGTAAGTATGGACAAGTGA+AGG | - | chr3.3:48315829-48315848 | MS.gene04196:CDS | 35.0% | |
| TTTAGCTACAACTGCTTGTA+AGG | - | chr3.3:48315922-48315941 | MS.gene04196:CDS | 35.0% | |
| ! | AACGATGTTAATGTTGGTGA+GGG | - | chr3.3:48315329-48315348 | MS.gene04196:CDS | 35.0% |
| !! | AATATTAGAGGTAGTGGAAG+AGG | - | chr3.3:48316202-48316221 | MS.gene04196:CDS | 35.0% |
| !! | AGGAAGTACTGTATTGTTTG+TGG | - | chr3.3:48315760-48315779 | MS.gene04196:CDS | 35.0% |
| !! | ATGATTGGTAATGCTGGAAA+TGG | - | chr3.3:48316316-48316335 | MS.gene04196:CDS | 35.0% |
| !! | GGAAGTACTGTATTGTTTGT+GGG | - | chr3.3:48315761-48315780 | MS.gene04196:CDS | 35.0% |
| !!! | CATGTTAATCCTGGCTTTTT+TGG | - | chr3.3:48316514-48316533 | MS.gene04196:CDS | 35.0% |
| AAAAAGCTGCTACCTTGAGT+GGG | - | chr3.3:48315564-48315583 | MS.gene04196:CDS | 40.0% | |
| AAAGCTAGTGGGAAATCGAA+AGG | - | chr3.3:48315872-48315891 | MS.gene04196:CDS | 40.0% | |
| AAGCTAGTGGGAAATCGAAA+GGG | - | chr3.3:48315873-48315892 | MS.gene04196:CDS | 40.0% | |
| AAGGTTGCAGAGTCAAGTTA+TGG | - | chr3.3:48316658-48316677 | MS.gene04196:CDS | 40.0% | |
| AATGGATATGGACCTGGTAT+TGG | - | chr3.3:48316334-48316353 | MS.gene04196:CDS | 40.0% | |
| ACGATTATCAACACATGAGG+AGG | - | chr3.3:48317113-48317132 | MS.gene04196:CDS | 40.0% | |
| AGGTATGGATGGTCCTAATA+TGG | - | chr3.3:48316579-48316598 | MS.gene04196:CDS | 40.0% | |
| AGGTTGCAGAGTCAAGTTAT+GGG | - | chr3.3:48316659-48316678 | MS.gene04196:CDS | 40.0% | |
| ATGGTAATCCGATGAGGAAT+AGG | - | chr3.3:48316269-48316288 | MS.gene04196:CDS | 40.0% | |
| ATGGTCCTAATATGGGAATG+TGG | - | chr3.3:48316587-48316606 | MS.gene04196:CDS | 40.0% | |
| CAACGATGTTAATGTTGGTG+AGG | - | chr3.3:48315328-48315347 | MS.gene04196:CDS | 40.0% | |
| CACGATTCCTTCTTTCTTCA+AGG | + | chr3.3:48316873-48316892 | None:intergenic | 40.0% | |
| CCAAATGAAGGATCAAAACC+CGG | + | chr3.3:48316382-48316401 | None:intergenic | 40.0% | |
| CTACAACTGCTTGTAAGGAA+GGG | - | chr3.3:48315927-48315946 | MS.gene04196:CDS | 40.0% | |
| GAATCGTGATGATAGAGAGA+TGG | - | chr3.3:48316885-48316904 | MS.gene04196:CDS | 40.0% | |
| GACATGACCTTGAAGAAAGA+AGG | - | chr3.3:48316863-48316882 | MS.gene04196:CDS | 40.0% | |
| GGGATGCATATGAATGGTAT+AGG | - | chr3.3:48316541-48316560 | MS.gene04196:CDS | 40.0% | |
| GGTAATGCTGGAAATGGATA+TGG | - | chr3.3:48316322-48316341 | MS.gene04196:CDS | 40.0% | |
| GGTATGGATGGTCCTAATAT+GGG | - | chr3.3:48316580-48316599 | MS.gene04196:CDS | 40.0% | |
| GTGGGATTAGGGTTGAATTA+GGG | - | chr3.3:48315540-48315559 | MS.gene04196:CDS | 40.0% | |
| TACTTCCGAACGAAAGTTCA+AGG | - | chr3.3:48316789-48316808 | MS.gene04196:CDS | 40.0% | |
| TATTATTCCCATCTCCACCT+TGG | + | chr3.3:48316153-48316172 | None:intergenic | 40.0% | |
| TGGTAATCCGATGAGGAATA+GGG | - | chr3.3:48316270-48316289 | MS.gene04196:CDS | 40.0% | |
| ! | ACATGATGATGAATGGGAGA+GGG | - | chr3.3:48317062-48317081 | MS.gene04196:CDS | 40.0% |
| ! | ACTCACCACATGATGATGAA+TGG | - | chr3.3:48317055-48317074 | MS.gene04196:CDS | 40.0% |
| ! | CGGAAGCTTCTTTTCTTCAA+CGG | + | chr3.3:48315405-48315424 | None:intergenic | 40.0% |
| ! | CTCACCACATGATGATGAAT+GGG | - | chr3.3:48317056-48317075 | MS.gene04196:CDS | 40.0% |
| ! | GAAGCTGAGCTTTGTAAGTA+TGG | - | chr3.3:48315818-48315837 | MS.gene04196:CDS | 40.0% |
| ! | TGTTTGTGGGTGATTTGCAT+TGG | - | chr3.3:48315774-48315793 | MS.gene04196:CDS | 40.0% |
| ! | TTTTCGACGAGAAAGCTAGT+GGG | - | chr3.3:48315861-48315880 | MS.gene04196:CDS | 40.0% |
| !! | AATGATGGGTTGATGAGACA+AGG | - | chr3.3:48315689-48315708 | MS.gene04196:CDS | 40.0% |
| !! | AGAGGTATGATTGGTAATGC+TGG | - | chr3.3:48316310-48316329 | MS.gene04196:CDS | 40.0% |
| !! | AGGTAGTGGAAGAGGTAATT+GGG | - | chr3.3:48316210-48316229 | MS.gene04196:CDS | 40.0% |
| !! | GGTTTTGATCCTTCATTTGG+TGG | - | chr3.3:48316382-48316401 | MS.gene04196:CDS | 40.0% |
| !! | TGGGAGAGGCTTTGAATAAT+AGG | - | chr3.3:48316020-48316039 | MS.gene04196:CDS | 40.0% |
| !! | TTTTTCGACGAGAAAGCTAG+TGG | - | chr3.3:48315860-48315879 | MS.gene04196:CDS | 40.0% |
| !!! | AATCCTGGCTTTTTTGGAAG+AGG | - | chr3.3:48316520-48316539 | MS.gene04196:CDS | 40.0% |
| !!! | ATCCTGGCTTTTTTGGAAGA+GGG | - | chr3.3:48316521-48316540 | MS.gene04196:CDS | 40.0% |
| AATGAAGTGGGTGTTCAAGG+AGG | - | chr3.3:48315518-48315537 | MS.gene04196:CDS | 45.0% | |
| AATGTGGCCGGATCCAAATA+TGG | - | chr3.3:48316603-48316622 | MS.gene04196:CDS | 45.0% | |
| ACCATACTGATGGTCAGATG+CGG | + | chr3.3:48316692-48316711 | None:intergenic | 45.0% | |
| AGAGCTTGTAGCGAATGAAG+TGG | - | chr3.3:48315505-48315524 | MS.gene04196:CDS | 45.0% | |
| AGCACCTAGAGAAAAAGACG+TGG | - | chr3.3:48316840-48316859 | MS.gene04196:CDS | 45.0% | |
| ATAGAGAGATGGGACGAGAA+CGG | - | chr3.3:48316896-48316915 | MS.gene04196:CDS | 45.0% | |
| ATCCCTCTTCCAAAAAAGCC+AGG | + | chr3.3:48316526-48316545 | None:intergenic | 45.0% | |
| ATCTGACCATCAGTATGGTG+AGG | - | chr3.3:48316693-48316712 | MS.gene04196:CDS | 45.0% | |
| ATGGACAAGTGAAGGAAGTG+AGG | - | chr3.3:48315837-48315856 | MS.gene04196:CDS | 45.0% | |
| ATGTGGCCGGATCCAAATAT+GGG | - | chr3.3:48316604-48316623 | MS.gene04196:CDS | 45.0% | |
| CAAAAAGCTGCTACCTTGAG+TGG | - | chr3.3:48315563-48315582 | MS.gene04196:CDS | 45.0% | |
| CATCATCATGTGGTGAGTCA+CGG | + | chr3.3:48317053-48317072 | None:intergenic | 45.0% | |
| CATCCACCCATATTTGGATC+CGG | + | chr3.3:48316613-48316632 | None:intergenic | 45.0% | |
| CTCTCCCATTCATCATCATG+TGG | + | chr3.3:48317063-48317082 | None:intergenic | 45.0% | |
| CTGATTATGGAAAGAGGAGG+CGG | - | chr3.3:48317157-48317176 | MS.gene04196:CDS | 45.0% | |
| GAAGGCAGCATACCAGAAAA+CGG | + | chr3.3:48316460-48316479 | None:intergenic | 45.0% | |
| GAGCTTGTAGCGAATGAAGT+GGG | - | chr3.3:48315506-48315525 | MS.gene04196:CDS | 45.0% | |
| GATCCAAATATGGGTGGATG+GGG | - | chr3.3:48316613-48316632 | MS.gene04196:CDS | 45.0% | |
| GATTCACCTCACCATACTGA+TGG | + | chr3.3:48316702-48316721 | None:intergenic | 45.0% | |
| GCACCTAGAGAAAAAGACGT+GGG | - | chr3.3:48316841-48316860 | MS.gene04196:CDS | 45.0% | |
| GCTACAACTGCTTGTAAGGA+AGG | - | chr3.3:48315926-48315945 | MS.gene04196:CDS | 45.0% | |
| GCTTGTAAGGAAGGGATGAA+TGG | - | chr3.3:48315935-48315954 | MS.gene04196:CDS | 45.0% | |
| GGAAGAGGGATGCATATGAA+TGG | - | chr3.3:48316535-48316554 | MS.gene04196:CDS | 45.0% | |
| GGATCCAAATATGGGTGGAT+GGG | - | chr3.3:48316612-48316631 | MS.gene04196:CDS | 45.0% | |
| GGTAATCCGATGAGGAATAG+GGG | - | chr3.3:48316271-48316290 | MS.gene04196:CDS | 45.0% | |
| GGTGGGATTAGGGTTGAATT+AGG | - | chr3.3:48315539-48315558 | MS.gene04196:CDS | 45.0% | |
| GGTTGCAGAGTCAAGTTATG+GGG | - | chr3.3:48316660-48316679 | MS.gene04196:CDS | 45.0% | |
| GTAACTACCAAGGTGGAGAT+GGG | - | chr3.3:48316143-48316162 | MS.gene04196:CDS | 45.0% | |
| GTAGCACCTCATGTTAATCC+TGG | - | chr3.3:48316505-48316524 | MS.gene04196:CDS | 45.0% | |
| TCAAAACCCGGATGCATCAT+AGG | + | chr3.3:48316370-48316389 | None:intergenic | 45.0% | |
| TCCTAATATGGGAATGTGGC+CGG | - | chr3.3:48316591-48316610 | MS.gene04196:CDS | 45.0% | |
| TGAATCCTGATAGAGCTGGT+TGG | - | chr3.3:48316716-48316735 | MS.gene04196:CDS | 45.0% | |
| TGATGAGACAAGGTCAAGGT+GGG | - | chr3.3:48315699-48315718 | MS.gene04196:CDS | 45.0% | |
| TGTTCAAGGAGGTGGGATTA+GGG | - | chr3.3:48315529-48315548 | MS.gene04196:CDS | 45.0% | |
| TTAGGACCATCCATACCTGA+TGG | + | chr3.3:48316577-48316596 | None:intergenic | 45.0% | |
| TTGATGAGACAAGGTCAAGG+TGG | - | chr3.3:48315698-48315717 | MS.gene04196:CDS | 45.0% | |
| ! | ATGGGTGGTAGAGGTATGAT+TGG | - | chr3.3:48316301-48316320 | MS.gene04196:CDS | 45.0% |
| ! | CACATGATGATGAATGGGAG+AGG | - | chr3.3:48317061-48317080 | MS.gene04196:CDS | 45.0% |
| ! | CATGATGATGAATGGGAGAG+GGG | - | chr3.3:48317063-48317082 | MS.gene04196:CDS | 45.0% |
| ! | GTAGTGGAAGAGGTAATTGG+GGG | - | chr3.3:48316212-48316231 | MS.gene04196:CDS | 45.0% |
| ! | GTGGACTACTGATGCTGATT+TGG | - | chr3.3:48315796-48315815 | MS.gene04196:CDS | 45.0% |
| ! | TGTCCCACGTCTTTTTCTCT+AGG | + | chr3.3:48316847-48316866 | None:intergenic | 45.0% |
| ! | TTGGGTTGCAGGGGATTATT+GGG | - | chr3.3:48315615-48315634 | MS.gene04196:CDS | 45.0% |
| ! | TTGTGGGTGATTTGCATTGG+TGG | - | chr3.3:48315777-48315796 | MS.gene04196:CDS | 45.0% |
| !! | CCGGGTTTTGATCCTTCATT+TGG | - | chr3.3:48316379-48316398 | MS.gene04196:CDS | 45.0% |
| !! | GAAATCGAAAGGGTACTGTC+AGG | - | chr3.3:48315883-48315902 | MS.gene04196:CDS | 45.0% |
| !! | GAGGTAGTGGAAGAGGTAAT+TGG | - | chr3.3:48316209-48316228 | MS.gene04196:CDS | 45.0% |
| !! | GGTAGTGGAAGAGGTAATTG+GGG | - | chr3.3:48316211-48316230 | MS.gene04196:CDS | 45.0% |
| !! | TTGGGGGTGTTGGAAATGAT+GGG | - | chr3.3:48315675-48315694 | MS.gene04196:CDS | 45.0% |
| !!! | TTGGGGTTGGTGGTTTTGTT+GGG | - | chr3.3:48315657-48315676 | MS.gene04196:CDS | 45.0% |
| !! | TATAATAATAATAATATTAG+AGG | - | chr3.3:48316190-48316209 | MS.gene04196:CDS | 5.0% |
| AAACCCGGATGCATCATAGG+CGG | + | chr3.3:48316367-48316386 | None:intergenic | 50.0% | |
| AACAGCAGCAACCACCAGTT+GGG | - | chr3.3:48315639-48315658 | MS.gene04196:CDS | 50.0% | |
| AAGTGGGTGTTCAAGGAGGT+GGG | - | chr3.3:48315522-48315541 | MS.gene04196:CDS | 50.0% | |
| AATCCGATGAGGAATAGGGG+AGG | - | chr3.3:48316274-48316293 | MS.gene04196:CDS | 50.0% | |
| AATCCTGGGATGGGGAATAG+AGG | - | chr3.3:48316244-48316263 | MS.gene04196:CDS | 50.0% | |
| ACAAAACCACCAACCCCAAC+TGG | + | chr3.3:48315656-48315675 | None:intergenic | 50.0% | |
| ACAGGTGGTAACTACCAAGG+TGG | - | chr3.3:48316136-48316155 | MS.gene04196:CDS | 50.0% | |
| AGAGGGAACAATCCTGGGAT+GGG | - | chr3.3:48316235-48316254 | MS.gene04196:CDS | 50.0% | |
| AGGGTGGTGATACTGGTGTT+GGG | - | chr3.3:48315597-48315616 | MS.gene04196:CDS | 50.0% | |
| ATACCAACGCCAGGGTATGA+AGG | + | chr3.3:48316478-48316497 | None:intergenic | 50.0% | |
| ATAGAGGATCAGAGAGGGAC+TGG | - | chr3.3:48316761-48316780 | MS.gene04196:CDS | 50.0% | |
| ATAGGGATGATCCCACCATC+AGG | - | chr3.3:48316559-48316578 | MS.gene04196:CDS | 50.0% | |
| ATCCCACCATCAGGTATGGA+TGG | - | chr3.3:48316568-48316587 | MS.gene04196:CDS | 50.0% | |
| CCAATGGGACCACCAAATGA+AGG | + | chr3.3:48316394-48316413 | None:intergenic | 50.0% | |
| CGGATCCAAATATGGGTGGA+TGG | - | chr3.3:48316611-48316630 | MS.gene04196:CDS | 50.0% | |
| CTCGAGATCTTGCACGATCA+CGG | + | chr3.3:48316930-48316949 | None:intergenic | 50.0% | |
| CTGAAACCCAGAAATCCCAC+CGG | + | chr3.3:48315480-48315499 | None:intergenic | 50.0% | |
| CTGCTACCTTGAGTGGGATT+GGG | - | chr3.3:48315570-48315589 | MS.gene04196:CDS | 50.0% | |
| GAAGAGGTAATTGGGGGAGA+GGG | - | chr3.3:48316218-48316237 | MS.gene04196:CDS | 50.0% | |
| GACCATCCATACCTGATGGT+GGG | + | chr3.3:48316573-48316592 | None:intergenic | 50.0% | |
| GAGGACATGGTAATCCGATG+AGG | - | chr3.3:48316263-48316282 | MS.gene04196:CDS | 50.0% | |
| GAGGTGAATCCTGATAGAGC+TGG | - | chr3.3:48316712-48316731 | MS.gene04196:CDS | 50.0% | |
| GATGATCCCACCATCAGGTA+TGG | - | chr3.3:48316564-48316583 | MS.gene04196:CDS | 50.0% | |
| GCGAATGAAGTGGGTGTTCA+AGG | - | chr3.3:48315515-48315534 | MS.gene04196:CDS | 50.0% | |
| GCTGGAAATGGATATGGACC+TGG | - | chr3.3:48316328-48316347 | MS.gene04196:CDS | 50.0% | |
| GGTAACTACCAAGGTGGAGA+TGG | - | chr3.3:48316142-48316161 | MS.gene04196:CDS | 50.0% | |
| GTGTTCAAGGAGGTGGGATT+AGG | - | chr3.3:48315528-48315547 | MS.gene04196:CDS | 50.0% | |
| TCCGGCCACATTCCCATATT+AGG | + | chr3.3:48316595-48316614 | None:intergenic | 50.0% | |
| TGCAGAGTCAAGTTATGGGG+AGG | - | chr3.3:48316663-48316682 | MS.gene04196:CDS | 50.0% | |
| TGCTACCTTGAGTGGGATTG+GGG | - | chr3.3:48315571-48315590 | MS.gene04196:CDS | 50.0% | |
| TTAGGCCAACCAGCTCTATC+AGG | + | chr3.3:48316724-48316743 | None:intergenic | 50.0% | |
| TTCGGCCATGAAACCATCGT+CGG | + | chr3.3:48315282-48315301 | None:intergenic | 50.0% | |
| TTGAGTGGGATTGGGGAACA+GGG | - | chr3.3:48315578-48315597 | MS.gene04196:CDS | 50.0% | |
| ! | ATACCAGAAAACGGAGGCGT+TGG | + | chr3.3:48316451-48316470 | None:intergenic | 50.0% |
| ! | ATACTGGTGTTGGGTTGCAG+GGG | - | chr3.3:48315606-48315625 | MS.gene04196:CDS | 50.0% |
| ! | CCTTCATTTGGTGGTCCCAT+TGG | - | chr3.3:48316391-48316410 | MS.gene04196:CDS | 50.0% |
| ! | GATACTGGTGTTGGGTTGCA+GGG | - | chr3.3:48315605-48315624 | MS.gene04196:CDS | 50.0% |
| ! | GTTGGGTTGCAGGGGATTAT+TGG | - | chr3.3:48315614-48315633 | MS.gene04196:CDS | 50.0% |
| ! | TGATACTGGTGTTGGGTTGC+AGG | - | chr3.3:48315604-48315623 | MS.gene04196:CDS | 50.0% |
| !! | GGGTTGATGAGACAAGGTCA+AGG | - | chr3.3:48315695-48315714 | MS.gene04196:CDS | 50.0% |
| !! | GTTGGGGGTGTTGGAAATGA+TGG | - | chr3.3:48315674-48315693 | MS.gene04196:CDS | 50.0% |
| !! | TACCAGAAAACGGAGGCGTT+GGG | + | chr3.3:48316450-48316469 | None:intergenic | 50.0% |
| !! | TATGGACCTGGTATTGGTGC+TGG | - | chr3.3:48316340-48316359 | MS.gene04196:CDS | 50.0% |
| !! | TGATGAACTTGGTGGTGGCA+AGG | - | chr3.3:48316639-48316658 | MS.gene04196:CDS | 50.0% |
| !!! | GTTGGGGTTGGTGGTTTTGT+TGG | - | chr3.3:48315656-48315675 | MS.gene04196:CDS | 50.0% |
| !!! | TGGGGTTGGTGGTTTTGTTG+GGG | - | chr3.3:48315658-48315677 | MS.gene04196:CDS | 50.0% |
| AAACCACCAACCCCAACTGG+TGG | + | chr3.3:48315653-48315672 | None:intergenic | 55.0% | |
| AACCCGGATGCATCATAGGC+GGG | + | chr3.3:48316366-48316385 | None:intergenic | 55.0% | |
| ACAGCAGCAACCACCAGTTG+GGG | - | chr3.3:48315640-48315659 | MS.gene04196:CDS | 55.0% | |
| ACCATGATCGTGACCGCGAA+AGG | - | chr3.3:48316950-48316969 | MS.gene04196:CDS | 55.0% | |
| ACTCCATGCATACCAACGCC+AGG | + | chr3.3:48316487-48316506 | None:intergenic | 55.0% | |
| AGATGGGACGAGAACGGTCT+CGG | - | chr3.3:48316902-48316921 | MS.gene04196:CDS | 55.0% | |
| AGGAATAGGGGAGGTGGGAT+GGG | - | chr3.3:48316283-48316302 | MS.gene04196:CDS | 55.0% | |
| ATAGCCACCCACTCGACCAA+TGG | + | chr3.3:48316410-48316429 | None:intergenic | 55.0% | |
| CAACAGCAGCAACCACCAGT+TGG | - | chr3.3:48315638-48315657 | MS.gene04196:CDS | 55.0% | |
| CAGGGTGGTGATACTGGTGT+TGG | - | chr3.3:48315596-48315615 | MS.gene04196:CDS | 55.0% | |
| CATGAAACCATCGTCGGCGA+CGG | + | chr3.3:48315276-48315295 | None:intergenic | 55.0% | |
| CATGATCGTGACCGCGAAAG+GGG | - | chr3.3:48316952-48316971 | MS.gene04196:CDS | 55.0% | |
| CCAAATATGGGTGGATGGGG+CGG | - | chr3.3:48316616-48316635 | MS.gene04196:CDS | 55.0% | |
| CCACCTCCCCTATTCCTCAT+CGG | + | chr3.3:48316280-48316299 | None:intergenic | 55.0% | |
| CCATGATCGTGACCGCGAAA+GGG | - | chr3.3:48316951-48316970 | MS.gene04196:CDS | 55.0% | |
| CGATGAGGAATAGGGGAGGT+GGG | - | chr3.3:48316278-48316297 | MS.gene04196:CDS | 55.0% | |
| CGGATATAGCTTCGTTGCGG+TGG | + | chr3.3:48315253-48315272 | None:intergenic | 55.0% | |
| CGGCGGATATAGCTTCGTTG+CGG | + | chr3.3:48315256-48315275 | None:intergenic | 55.0% | |
| CTCCATGCATACCAACGCCA+GGG | + | chr3.3:48316486-48316505 | None:intergenic | 55.0% | |
| CTGTTCCCCAATCCCACTCA+AGG | + | chr3.3:48315579-48315598 | None:intergenic | 55.0% | |
| CTTGAGTGGGATTGGGGAAC+AGG | - | chr3.3:48315577-48315596 | MS.gene04196:CDS | 55.0% | |
| GAAGTGGGTGTTCAAGGAGG+TGG | - | chr3.3:48315521-48315540 | MS.gene04196:CDS | 55.0% | |
| GAGAGGGAACAATCCTGGGA+TGG | - | chr3.3:48316234-48316253 | MS.gene04196:CDS | 55.0% | |
| GAGGGAACAATCCTGGGATG+GGG | - | chr3.3:48316236-48316255 | MS.gene04196:CDS | 55.0% | |
| GCCGCATCTGACCATCAGTA+TGG | - | chr3.3:48316688-48316707 | MS.gene04196:CDS | 55.0% | |
| GCTGCTACCTTGAGTGGGAT+TGG | - | chr3.3:48315569-48315588 | MS.gene04196:CDS | 55.0% | |
| GGAAGAGGTAATTGGGGGAG+AGG | - | chr3.3:48316217-48316236 | MS.gene04196:CDS | 55.0% | |
| GGACCATCCATACCTGATGG+TGG | + | chr3.3:48316574-48316593 | None:intergenic | 55.0% | |
| GGCAGCATACCAGAAAACGG+AGG | + | chr3.3:48316457-48316476 | None:intergenic | 55.0% | |
| GGGACAGGTGGTAACTACCA+AGG | - | chr3.3:48316133-48316152 | MS.gene04196:CDS | 55.0% | |
| GGGATGGGGAATAGAGGACA+TGG | - | chr3.3:48316250-48316269 | MS.gene04196:CDS | 55.0% | |
| GGTATGCTGCCTTCATACCC+TGG | - | chr3.3:48316466-48316485 | MS.gene04196:CDS | 55.0% | |
| TAGCCACCCACTCGACCAAT+GGG | + | chr3.3:48316409-48316428 | None:intergenic | 55.0% | |
| TGACAGGCACAGGGAAGACA+GGG | - | chr3.3:48316996-48317015 | MS.gene04196:CDS | 55.0% | |
| TGGCCGGATCCAAATATGGG+TGG | - | chr3.3:48316607-48316626 | MS.gene04196:CDS | 55.0% | |
| TGTCCTCTATTCCCCATCCC+AGG | + | chr3.3:48316250-48316269 | None:intergenic | 55.0% | |
| ! | AGGATCAGAGAGGGACTGGT+CGG | - | chr3.3:48316765-48316784 | MS.gene04196:CDS | 55.0% |
| !! | TACCCTGGCGTTGGTATGCA+TGG | - | chr3.3:48316481-48316500 | MS.gene04196:CDS | 55.0% |
| !!! | GGGGTTGGTGGTTTTGTTGG+GGG | - | chr3.3:48315659-48315678 | MS.gene04196:CDS | 55.0% |
| !!! | GGTGGTTTTGTTGGGGGTGT+TGG | - | chr3.3:48315665-48315684 | MS.gene04196:CDS | 55.0% |
| AATAGGGGAGGTGGGATGGG+TGG | - | chr3.3:48316286-48316305 | MS.gene04196:CDS | 60.0% | |
| AGTGGGATTGGGGAACAGGG+TGG | - | chr3.3:48315581-48315600 | MS.gene04196:CDS | 60.0% | |
| ATGGACGAAGACGGAGGGCA+CGG | - | chr3.3:48315215-48315234 | MS.gene04196:CDS | 60.0% | |
| CAACCACCAGTTGGGGTTGG+TGG | - | chr3.3:48315647-48315666 | MS.gene04196:CDS | 60.0% | |
| CAAGGTCAAGGTGGGCGTGT+TGG | - | chr3.3:48315707-48315726 | MS.gene04196:CDS | 60.0% | |
| CAGCAACCACCAGTTGGGGT+TGG | - | chr3.3:48315644-48315663 | MS.gene04196:CDS | 60.0% | |
| CCCTTTCGCGGTCACGATCA+TGG | + | chr3.3:48316954-48316973 | None:intergenic | 60.0% | |
| CCGATGAGGAATAGGGGAGG+TGG | - | chr3.3:48316277-48316296 | MS.gene04196:CDS | 60.0% | |
| CCGCCCCATCCACCCATATT+TGG | + | chr3.3:48316619-48316638 | None:intergenic | 60.0% | |
| CGTCGCCGACGATGGTTTCA+TGG | - | chr3.3:48315274-48315293 | MS.gene04196:CDS | 60.0% | |
| CTGCCTTCATACCCTGGCGT+TGG | - | chr3.3:48316472-48316491 | MS.gene04196:CDS | 60.0% | |
| GAGGAATAGGGGAGGTGGGA+TGG | - | chr3.3:48316282-48316301 | MS.gene04196:CDS | 60.0% | |
| GATGGGACGAGAACGGTCTC+GGG | - | chr3.3:48316903-48316922 | MS.gene04196:CDS | 60.0% | |
| GGATGGGGCGGTGATGAACT+TGG | - | chr3.3:48316628-48316647 | MS.gene04196:CDS | 60.0% | |
| GGCACGGCAGTTGGGTTCAT+CGG | + | chr3.3:48316052-48316071 | None:intergenic | 60.0% | |
| GGGAGAGGGGACGATCTTCT+AGG | - | chr3.3:48317076-48317095 | MS.gene04196:CDS | 60.0% | |
| GGGGAACAGGGTGGTGATAC+TGG | - | chr3.3:48315590-48315609 | MS.gene04196:CDS | 60.0% | |
| GGGGGAGAGGGAACAATCCT+GGG | - | chr3.3:48316230-48316249 | MS.gene04196:CDS | 60.0% | |
| GGTCCTCTCCTTCCCTGGTT+CGG | + | chr3.3:48316073-48316092 | None:intergenic | 60.0% | |
| GGTGGCTATGCAGGCTATCC+CGG | - | chr3.3:48316421-48316440 | MS.gene04196:CDS | 60.0% | |
| GGTGGTCCCATTGGTCGAGT+GGG | - | chr3.3:48316400-48316419 | MS.gene04196:CDS | 60.0% | |
| GTCCCAACGTTACCACCACC+CGG | + | chr3.3:48316118-48316137 | None:intergenic | 60.0% | |
| GTGACAGGCACAGGGAAGAC+AGG | - | chr3.3:48316995-48317014 | MS.gene04196:CDS | 60.0% | |
| TGAGGCTGGAGGGGTTAAGC+CGG | - | chr3.3:48316096-48316115 | MS.gene04196:CDS | 60.0% | |
| TGGCCCGCCTATGATGCATC+CGG | - | chr3.3:48316360-48316379 | MS.gene04196:CDS | 60.0% | |
| TGGGGCGGTGATGAACTTGG+TGG | - | chr3.3:48316631-48316650 | MS.gene04196:CDS | 60.0% | |
| TGGGGGAGAGGGAACAATCC+TGG | - | chr3.3:48316229-48316248 | MS.gene04196:CDS | 60.0% | |
| TGGTGGTCCCATTGGTCGAG+TGG | - | chr3.3:48316399-48316418 | MS.gene04196:CDS | 60.0% | |
| TTAACCCCTCCAGCCTCAGC+AGG | + | chr3.3:48316094-48316113 | None:intergenic | 60.0% | |
| ! | AAGCCGGGTGGTGGTAACGT+TGG | - | chr3.3:48316112-48316131 | MS.gene04196:CDS | 60.0% |
| ! | AGCCGGGTGGTGGTAACGTT+GGG | - | chr3.3:48316113-48316132 | MS.gene04196:CDS | 60.0% |
| ! | CGTGTTGGTGGAGGAAGTGG+GGG | - | chr3.3:48315722-48315741 | MS.gene04196:CDS | 60.0% |
| ! | GCGTGTTGGTGGAGGAAGTG+GGG | - | chr3.3:48315721-48315740 | MS.gene04196:CDS | 60.0% |
| ! | GGCGGTGATGAACTTGGTGG+TGG | - | chr3.3:48316634-48316653 | MS.gene04196:CDS | 60.0% |
| ! | GGCGTGTTGGTGGAGGAAGT+GGG | - | chr3.3:48315720-48315739 | MS.gene04196:CDS | 60.0% |
| ! | GGTGGTAACGTTGGGACAGG+TGG | - | chr3.3:48316121-48316140 | MS.gene04196:CDS | 60.0% |
| ! | GGTGGTGGTAACGTTGGGAC+AGG | - | chr3.3:48316118-48316137 | MS.gene04196:CDS | 60.0% |
| !! | AGGGTGCCGGTGGGATTTCT+GGG | - | chr3.3:48315471-48315490 | MS.gene04196:CDS | 60.0% |
| !! | GGATCAGAGAGGGACTGGTC+GGG | - | chr3.3:48316766-48316785 | MS.gene04196:CDS | 60.0% |
| !! | TCTCCTTCCCTGGTTCGGCA+CGG | + | chr3.3:48316068-48316087 | None:intergenic | 60.0% |
| ACCACCACCGCTGACAGCTC+AGG | - | chr3.3:48315451-48315470 | MS.gene04196:CDS | 65.0% | |
| ACCGTGAGCGTGACAGGCAC+AGG | - | chr3.3:48316986-48317005 | MS.gene04196:CDS | 65.0% | |
| AGAGGACCTGCTGAGGCTGG+AGG | - | chr3.3:48316085-48316104 | MS.gene04196:CDS | 65.0% | |
| AGCGTGACCGTGAGCGTGAC+AGG | - | chr3.3:48316980-48316999 | MS.gene04196:CDS | 65.0% | |
| AGGACCTGCTGAGGCTGGAG+GGG | - | chr3.3:48316087-48316106 | MS.gene04196:CDS | 65.0% | |
| AGGAGAGGACCTGCTGAGGC+TGG | - | chr3.3:48316082-48316101 | MS.gene04196:CDS | 65.0% | |
| ATATCCGCCGTCGCCGACGA+TGG | - | chr3.3:48315266-48315285 | MS.gene04196:CDS | 65.0% | |
| ATCGTGACCGCGAAAGGGGC+AGG | - | chr3.3:48316956-48316975 | MS.gene04196:CDS | 65.0% | |
| CAGCAGGTCCTCTCCTTCCC+TGG | + | chr3.3:48316078-48316097 | None:intergenic | 65.0% | |
| CCAACTGCCGTGCCGAACCA+GGG | - | chr3.3:48316058-48316077 | MS.gene04196:CDS | 65.0% | |
| CCACCACCGCTGACAGCTCA+GGG | - | chr3.3:48315452-48315471 | MS.gene04196:CDS | 65.0% | |
| CCCTGTGCCTGTCACGCTCA+CGG | + | chr3.3:48316990-48317009 | None:intergenic | 65.0% | |
| CCGTGAGCGTGACAGGCACA+GGG | - | chr3.3:48316987-48317006 | MS.gene04196:CDS | 65.0% | |
| GAAACCATCGTCGGCGACGG+CGG | + | chr3.3:48315273-48315292 | None:intergenic | 65.0% | |
| GAGGACCTGCTGAGGCTGGA+GGG | - | chr3.3:48316086-48316105 | MS.gene04196:CDS | 65.0% | |
| GAGGCTGGAGGGGTTAAGCC+GGG | - | chr3.3:48316097-48316116 | MS.gene04196:CDS | 65.0% | |
| GGAGGTGGGATGGGTGGTAG+AGG | - | chr3.3:48316292-48316311 | MS.gene04196:CDS | 65.0% | |
| GGCCCGCCTATGATGCATCC+GGG | - | chr3.3:48316361-48316380 | MS.gene04196:CDS | 65.0% | |
| GGCTATGCAGGCTATCCCGG+TGG | - | chr3.3:48316424-48316443 | MS.gene04196:CDS | 65.0% | |
| GGGAAGGAGAGGACCTGCTG+AGG | - | chr3.3:48316078-48316097 | MS.gene04196:CDS | 65.0% | |
| GGTCAAGGTGGGCGTGTTGG+TGG | - | chr3.3:48315710-48315729 | MS.gene04196:CDS | 65.0% | |
| GGTCCCATTGGTCGAGTGGG+TGG | - | chr3.3:48316403-48316422 | MS.gene04196:CDS | 65.0% | |
| GGTCGAGTGGGTGGCTATGC+AGG | - | chr3.3:48316412-48316431 | MS.gene04196:CDS | 65.0% | |
| GTGCCGAACCAGGGAAGGAG+AGG | - | chr3.3:48316067-48316086 | MS.gene04196:CDS | 65.0% | |
| TCGTGACCGCGAAAGGGGCA+GGG | - | chr3.3:48316957-48316976 | MS.gene04196:CDS | 65.0% | |
| ! | CAAGGTGGGCGTGTTGGTGG+AGG | - | chr3.3:48315713-48315732 | MS.gene04196:CDS | 65.0% |
| ! | GGCCCAACGCCTCCGTTTTC+TGG | - | chr3.3:48316445-48316464 | MS.gene04196:CDS | 65.0% |
| ! | GGGCGTGTTGGTGGAGGAAG+TGG | - | chr3.3:48315719-48315738 | MS.gene04196:CDS | 65.0% |
| ! | TGAGCTGTCAGCGGTGGTGG+TGG | + | chr3.3:48315452-48315471 | None:intergenic | 65.0% |
| !! | AAACGGAGGCGTTGGGCCAC+CGG | + | chr3.3:48316443-48316462 | None:intergenic | 65.0% |
| !! | CAGGGTGCCGGTGGGATTTC+TGG | - | chr3.3:48315470-48315489 | MS.gene04196:CDS | 65.0% |
| !! | CCTGGTTCGGCACGGCAGTT+GGG | + | chr3.3:48316060-48316079 | None:intergenic | 65.0% |
| !! | TGACAGCTCAGGGTGCCGGT+GGG | - | chr3.3:48315462-48315481 | MS.gene04196:CDS | 65.0% |
| CACGCTCCCTGCCCCTTTCG+CGG | + | chr3.3:48316966-48316985 | None:intergenic | 70.0% | |
| CCCAACTGCCGTGCCGAACC+AGG | - | chr3.3:48316057-48316076 | MS.gene04196:CDS | 70.0% | |
| CCCTGAGCTGTCAGCGGTGG+TGG | + | chr3.3:48315455-48315474 | None:intergenic | 70.0% | |
| CCGCTGACAGCTCAGGGTGC+CGG | - | chr3.3:48315458-48315477 | MS.gene04196:CDS | 70.0% | |
| CCGGCACCCTGAGCTGTCAG+CGG | + | chr3.3:48315461-48315480 | None:intergenic | 70.0% | |
| CTGCCGTGCCGAACCAGGGA+AGG | - | chr3.3:48316062-48316081 | MS.gene04196:CDS | 70.0% | |
| GCACCCTGAGCTGTCAGCGG+TGG | + | chr3.3:48315458-48315477 | None:intergenic | 70.0% | |
| GCTGGAGGGGTTAAGCCGGG+TGG | - | chr3.3:48316100-48316119 | MS.gene04196:CDS | 70.0% | |
| GGAGGGGTTAAGCCGGGTGG+TGG | - | chr3.3:48316103-48316122 | MS.gene04196:CDS | 70.0% | |
| GGCGGGCCAGCACCAATACC+AGG | + | chr3.3:48316349-48316368 | None:intergenic | 70.0% | |
| ! | AGTGGCAACGGCGGTGGTGG+CGG | + | chr3.3:48315425-48315444 | None:intergenic | 70.0% |
| ! | AGTGGGGGTGCAGGTGGTGG+TGG | - | chr3.3:48315737-48315756 | MS.gene04196:CDS | 70.0% |
| ! | GACGAAGACGGAGGGCACGG+TGG | - | chr3.3:48315218-48315237 | MS.gene04196:CDS | 70.0% |
| ! | GGAAGTGGGGGTGCAGGTGG+TGG | - | chr3.3:48315734-48315753 | MS.gene04196:CDS | 70.0% |
| ! | GGAGGAAGTGGGGGTGCAGG+TGG | - | chr3.3:48315731-48315750 | MS.gene04196:CDS | 70.0% |
| ! | GGTGGAGGAAGTGGGGGTGC+AGG | - | chr3.3:48315728-48315747 | MS.gene04196:CDS | 70.0% |
| !! | AACGGAGGCGTTGGGCCACC+GGG | + | chr3.3:48316442-48316461 | None:intergenic | 70.0% |
| !! | CCCTGGTTCGGCACGGCAGT+TGG | + | chr3.3:48316061-48316080 | None:intergenic | 70.0% |
| !! | CTGACAGCTCAGGGTGCCGG+TGG | - | chr3.3:48315461-48315480 | MS.gene04196:CDS | 70.0% |
| !! | GCTGTCAGCGGTGGTGGTGG+CGG | + | chr3.3:48315449-48315468 | None:intergenic | 70.0% |
| !! | GGTGGTGGCGGCAGTGGCAA+CGG | + | chr3.3:48315437-48315456 | None:intergenic | 70.0% |
| GGCAGTGGCAACGGCGGTGG+TGG | + | chr3.3:48315428-48315447 | None:intergenic | 75.0% | |
| ! | GGTGGCGGCAGTGGCAACGG+CGG | + | chr3.3:48315434-48315453 | None:intergenic | 75.0% |
| !! | AGCGGTGGTGGTGGCGGCAG+TGG | + | chr3.3:48315443-48315462 | None:intergenic | 75.0% |
| !! | GGGGGTGCAGGTGGTGGTGG+AGG | - | chr3.3:48315740-48315759 | MS.gene04196:CDS | 75.0% |
| ! | GGCGGCAGTGGCAACGGCGG+TGG | + | chr3.3:48315431-48315450 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 48315215 | 48317194 | 48315215 | ID=MS.gene04196 |
| chr3.3 | mRNA | 48315215 | 48317194 | 48315215 | ID=MS.gene04196.t1;Parent=MS.gene04196 |
| chr3.3 | exon | 48315215 | 48317194 | 48315215 | ID=MS.gene04196.t1.exon1;Parent=MS.gene04196.t1 |
| chr3.3 | CDS | 48315215 | 48317194 | 48315215 | ID=cds.MS.gene04196.t1;Parent=MS.gene04196.t1 |
| Gene Sequence |
| Protein sequence |
