AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene042758

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene042758.t1 MTR_6g039440 69.581 549 167 0 1 549 4 552 0.0 818
MS.gene042758.t1 MTR_5g062230 70.741 540 158 0 10 549 13 552 0.0 806
MS.gene042758.t1 MTR_6g008560 67.760 549 176 1 2 549 8 556 0.0 798
MS.gene042758.t1 MTR_4g048460 68.934 544 169 0 6 549 17 560 0.0 789
MS.gene042758.t1 MTR_3g464190 66.485 549 183 1 1 548 7 555 0.0 773
MS.gene042758.t1 MTR_5g073260 64.428 551 194 2 1 549 1 551 0.0 744
MS.gene042758.t1 MTR_5g073200 65.809 544 185 1 6 548 4 547 0.0 741
MS.gene042758.t1 MTR_5g094620 63.235 544 181 2 6 549 12 536 0.0 728
MS.gene042758.t1 MTR_4g081460 58.212 548 226 2 4 549 15 561 0.0 664
MS.gene042758.t1 MTR_4g048460 68.000 450 144 0 4 453 15 464 0.0 636
MS.gene042758.t1 MTR_6g008560 68.250 400 127 0 150 549 1 400 0.0 594
MS.gene042758.t1 MTR_2g082010 45.238 546 293 6 7 548 23 566 4.63e-177 511
MS.gene042758.t1 MTR_2g081980 45.788 546 288 7 9 548 12 555 2.35e-176 509
MS.gene042758.t1 MTR_8g007515 46.350 548 286 6 7 548 9 554 1.23e-172 500
MS.gene042758.t1 MTR_2g082060 44.139 546 286 8 9 548 19 551 1.06e-162 474
MS.gene042758.t1 MTR_4g019550 42.468 551 293 8 9 548 19 556 2.48e-147 435
MS.gene042758.t1 MTR_2g082050 40.631 507 242 8 47 550 9 459 5.51e-128 382
MS.gene042758.t1 MTR_4g045810 34.799 546 345 4 7 548 41 579 1.18e-114 352
MS.gene042758.t1 MTR_2g089120 36.311 515 305 9 43 550 67 565 2.54e-108 335
MS.gene042758.t1 MTR_2g064425 35.675 541 338 6 11 549 53 585 1.67e-107 334
MS.gene042758.t1 MTR_2g089130 34.638 511 316 6 43 549 67 563 5.73e-105 327
MS.gene042758.t1 MTR_8g057020 33.698 549 355 6 3 549 47 588 1.32e-98 311
MS.gene042758.t1 MTR_2g064425 34.011 541 332 7 11 549 53 570 3.21e-97 306
MS.gene042758.t1 MTR_2g065450 33.212 551 355 6 2 549 49 589 3.42e-96 305
MS.gene042758.t1 MTR_4g092020 32.427 515 335 6 38 548 64 569 1.07e-87 282
MS.gene042758.t1 MTR_7g010710 30.672 551 373 6 1 547 7 552 2.86e-87 280
MS.gene042758.t1 MTR_2g064425 43.251 363 194 7 11 370 53 406 8.30e-87 275
MS.gene042758.t1 MTR_4g092010 30.952 546 365 9 2 542 18 556 3.50e-85 275
MS.gene042758.t1 MTR_7g057340 67.251 171 56 0 379 549 1 171 2.03e-83 257
MS.gene042758.t1 MTR_7g057390 66.082 171 55 1 379 549 1 168 2.67e-78 244
MS.gene042758.t1 MTR_5g094530 59.361 219 51 4 160 375 1 184 3.82e-78 244
MS.gene042758.t1 MTR_2g064425 40.771 363 188 8 11 370 53 391 1.41e-76 248
MS.gene042758.t1 MTR_2g010960 29.333 525 344 9 36 541 2 518 1.59e-74 246
MS.gene042758.t1 MTR_6g064980 30.200 500 324 9 48 532 13 502 4.39e-70 234
MS.gene042758.t1 MTR_3g063170 29.109 505 343 9 48 541 13 513 3.16e-67 226
MS.gene042758.t1 MTR_3g063140 29.839 496 323 9 48 528 13 498 4.61e-67 226
MS.gene042758.t1 MTR_3g063120 28.947 494 324 9 67 544 6 488 8.13e-67 225
MS.gene042758.t1 MTR_3g465090 29.592 490 332 7 48 528 13 498 1.19e-66 225
MS.gene042758.t1 MTR_3g052120 29.216 510 338 9 48 544 13 512 4.21e-63 215
MS.gene042758.t1 MTR_7g050990 61.446 166 53 2 193 358 27 181 6.25e-59 211
MS.gene042758.t1 MTR_6g065040 29.136 405 269 7 132 528 2 396 2.57e-55 191
MS.gene042758.t1 MTR_3g015080 45.614 171 55 2 379 549 1 133 2.68e-43 150
MS.gene042758.t1 MTR_3g063160 31.636 275 172 5 57 322 21 288 1.44e-35 135
MS.gene042758.t1 MTR_2g064295 24.419 516 348 15 64 548 256 760 1.28e-33 136
MS.gene042758.t1 MTR_3g058160 25.621 523 333 17 64 548 65 569 1.56e-33 135
MS.gene042758.t1 MTR_3g058160 25.621 523 333 17 64 548 269 773 3.25e-33 135
MS.gene042758.t1 MTR_2g012870 24.084 573 395 16 4 548 194 754 3.36e-33 135
MS.gene042758.t1 MTR_3g058160 25.621 523 333 17 64 548 256 760 3.60e-33 135
MS.gene042758.t1 MTR_3g058160 25.621 523 333 17 64 548 276 780 3.99e-33 135
MS.gene042758.t1 MTR_3g058160 25.000 544 331 18 64 548 276 801 1.46e-30 127
MS.gene042758.t1 MTR_2g012900 24.565 517 339 17 4 480 194 699 2.24e-30 126
MS.gene042758.t1 MTR_7g094970 28.261 276 168 7 60 307 204 477 6.26e-26 112
MS.gene042758.t1 MTR_7g011663 30.686 277 158 7 60 304 342 616 1.88e-25 111
MS.gene042758.t1 MTR_5g030050 30.189 265 150 8 67 306 3 257 1.98e-24 104
MS.gene042758.t1 MTR_7g011770 29.897 291 173 8 67 328 245 533 9.74e-23 102
MS.gene042758.t1 MTR_5g081730 37.273 110 64 1 147 251 2 111 6.31e-15 72.8
MS.gene042758.t1 MTR_8g073530 31.638 177 86 7 111 260 15 183 1.93e-13 71.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene042758.t1 AT5G23960 40.293 546 319 5 7 549 3 544 9.57e-151 444
MS.gene042758.t1 AT5G23960 40.328 548 318 6 7 549 3 546 5.42e-150 442
MS.gene042758.t1 AT1G70080 38.462 546 326 7 11 548 66 609 4.50e-127 385
MS.gene042758.t1 AT3G14490 37.912 546 327 7 11 549 60 600 6.22e-122 372
MS.gene042758.t1 AT3G14520 36.735 539 333 5 16 549 68 603 2.04e-121 370
MS.gene042758.t1 AT1G31950 36.111 540 335 5 16 549 70 605 3.70e-120 367
MS.gene042758.t1 AT3G14540 36.920 539 332 4 16 549 65 600 1.28e-119 365
MS.gene042758.t1 AT1G31950 36.044 541 335 6 16 549 70 606 2.15e-119 365
MS.gene042758.t1 AT5G44630 36.147 545 337 6 12 548 14 555 2.63e-115 353
MS.gene042758.t1 AT1G33750 35.019 534 341 4 18 549 73 602 3.69e-113 349
MS.gene042758.t1 AT3G32030 35.065 539 342 6 16 549 68 603 5.12e-113 348
MS.gene042758.t1 AT4G20210 34.982 546 342 7 11 548 58 598 1.24e-111 345
MS.gene042758.t1 AT3G29410 34.807 543 346 6 11 549 64 602 2.03e-111 344
MS.gene042758.t1 AT4G13300 36.685 537 329 7 19 548 20 552 5.57e-110 339
MS.gene042758.t1 AT4G20200 36.486 518 311 9 42 548 92 602 7.24e-110 340
MS.gene042758.t1 AT4G15870 35.018 554 334 9 3 548 61 596 4.64e-109 338
MS.gene042758.t1 AT3G29190 35.140 535 321 9 32 549 75 600 9.08e-109 337
MS.gene042758.t1 AT3G29410 35.000 500 319 4 53 549 1 497 2.06e-105 325
MS.gene042758.t1 AT4G13280 35.888 535 332 7 21 548 22 552 4.31e-104 324
MS.gene042758.t1 AT4G20230 34.011 541 335 9 19 546 82 613 1.41e-101 319
MS.gene042758.t1 AT4G20230 34.011 541 335 9 19 546 70 601 1.76e-101 319
MS.gene042758.t1 AT3G14540 37.444 446 272 3 16 457 65 507 8.54e-100 311
MS.gene042758.t1 AT1G31950 36.105 457 281 6 16 465 70 522 1.56e-99 311
MS.gene042758.t1 AT4G16730 31.793 541 352 7 22 549 2 538 1.57e-99 311
MS.gene042758.t1 AT3G29110 34.312 545 347 8 11 548 55 595 4.45e-99 312
MS.gene042758.t1 AT2G23230 33.883 546 346 9 10 545 55 595 9.10e-98 309
MS.gene042758.t1 AT1G66020 33.088 544 355 6 11 548 56 596 3.12e-96 305
MS.gene042758.t1 AT4G16730 32.121 495 321 5 67 549 1 492 1.18e-95 300
MS.gene042758.t1 AT2G23230 33.700 546 342 10 10 545 55 590 2.58e-95 303
MS.gene042758.t1 AT4G13280 34.766 535 308 9 21 548 22 522 1.25e-92 293
MS.gene042758.t1 AT1G48800 31.502 546 358 9 11 546 63 602 1.34e-91 293
MS.gene042758.t1 AT4G16740 31.712 555 356 10 6 549 21 563 6.55e-91 290
MS.gene042758.t1 AT2G24210 31.362 558 364 9 4 549 39 589 8.26e-91 290
MS.gene042758.t1 AT3G25830 31.239 557 359 11 9 549 45 593 3.80e-87 281
MS.gene042758.t1 AT3G25820 31.239 557 359 11 9 549 45 593 3.80e-87 281
MS.gene042758.t1 AT1G61680 31.984 494 318 4 48 528 69 557 1.77e-86 278
MS.gene042758.t1 AT3G25810 30.961 562 357 11 9 549 45 596 2.05e-86 279
MS.gene042758.t1 AT5G48110 37.647 340 207 5 210 548 2 337 2.00e-83 263
MS.gene042758.t1 AT1G61680 31.579 494 313 5 48 528 69 550 4.24e-83 270
MS.gene042758.t1 AT1G48820 31.169 539 321 11 11 543 63 557 1.80e-81 265
MS.gene042758.t1 AT4G16740 35.955 356 210 6 6 351 21 368 2.28e-70 231
MS.gene042758.t1 AT1G66020 35.230 369 230 6 11 373 56 421 8.95e-67 223
MS.gene042758.t1 AT3G25820 32.468 385 243 7 9 383 45 422 4.11e-65 219
MS.gene042758.t1 AT4G16740 35.866 329 193 6 6 324 21 341 1.98e-62 209
MS.gene042758.t1 AT4G16740 35.866 329 193 6 6 324 21 341 1.98e-62 209
MS.gene042758.t1 AT3G25820 33.742 326 199 7 9 324 45 363 5.41e-56 193
MS.gene042758.t1 AT3G25820 33.742 326 199 7 9 324 45 363 5.41e-56 193
MS.gene042758.t1 AT1G61120 23.930 514 347 13 62 548 286 782 1.43e-28 121
MS.gene042758.t1 AT1G79460 22.929 519 351 19 64 548 274 777 2.34e-26 114
MS.gene042758.t1 AT4G02780 29.588 267 150 8 60 294 327 587 1.08e-24 109

Find 94 sgRNAs with CRISPR-Local

Find 211 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTACTTACGTTGGCAAAAT+TGG 0.135143 6.1:-60889186 MS.gene042758:CDS
ATTCTATTTCTGTGCTATTT+AGG 0.140011 6.1:-60890170 MS.gene042758:CDS
TTCTATTTCTGTGCTATTTA+GGG 0.183039 6.1:-60890169 MS.gene042758:CDS
CTGCTGTTCATTGCAGGCTT+AGG 0.241228 6.1:-60887657 MS.gene042758:CDS
AGCCTACATCAAAAGGAATT+TGG 0.257080 6.1:-60889146 MS.gene042758:CDS
ACGTAAGTAGAATTTCATTA+TGG 0.259315 6.1:+60889198 None:intergenic
GATTCATGGTGAGAAAATTT+TGG 0.259321 6.1:-60889384 MS.gene042758:CDS
TCCGTATGCTTCAGAATCTT+TGG 0.269105 6.1:-60890916 MS.gene042758:intron
GTCATCAATGTATGATAAAA+TGG 0.271835 6.1:+60888876 None:intergenic
ATGCTGCTGCTGTTCATTGC+AGG 0.286868 6.1:-60887663 MS.gene042758:CDS
CTTGCGACACAAGTCAAATA+TGG 0.304641 6.1:-60889299 MS.gene042758:CDS
CAGATTTCCACCCTAGCGTT+TGG 0.305039 6.1:-60890953 MS.gene042758:CDS
AGATTTCCACCCTAGCGTTT+GGG 0.318717 6.1:-60890952 MS.gene042758:CDS
AGACGAAATTAATCAAGTTT+TGG 0.321368 6.1:-60890250 MS.gene042758:CDS
TTCCTTGCTTGTCCTTGAAT+TGG 0.334271 6.1:+60889474 None:intergenic
TAGTTGTTTGGATGATCTTC+CGG 0.341349 6.1:-60888529 MS.gene042758:CDS
GAGTAGTAGAATGTTGCTTT+TGG 0.347068 6.1:-60888963 MS.gene042758:CDS
TTATATGAGGGAATATGATA+TGG 0.360767 6.1:-60887307 MS.gene042758:CDS
CCAATTGAAGATATCATTTG+TGG 0.372281 6.1:+60887711 None:intergenic
TTCATGTACTCCTCTGTTGT+TGG 0.374525 6.1:+60887802 None:intergenic
TGCTGTTCATTGCAGGCTTA+GGG 0.376798 6.1:-60887656 MS.gene042758:CDS
CCACAAATGATATCTTCAAT+TGG 0.377027 6.1:-60887711 MS.gene042758:CDS
CGTAAGTAGAATTTCATTAT+GGG 0.378944 6.1:+60889199 None:intergenic
AAACGTAATGGAACTTTAGT+TGG 0.382677 6.1:+60887207 None:intergenic
TAGGTGGGATATTAGTTGTT+TGG 0.387739 6.1:-60888541 MS.gene042758:CDS
GGATGAATCTTGCTCATAGA+TGG 0.390050 6.1:+60889220 None:intergenic
GATTGACTCAATATGTCGTT+TGG 0.390339 6.1:-60890292 MS.gene042758:CDS
CATACTTGGAATGTTATATG+AGG 0.398446 6.1:-60887320 MS.gene042758:CDS
AGGACATGTTGCTTCATACT+TGG 0.399041 6.1:-60887334 MS.gene042758:CDS
ATATAAATGAGGAATGTCTT+AGG 0.410838 6.1:-60887230 MS.gene042758:CDS
TCGCAAGAGAAGGACTCAAT+TGG 0.412353 6.1:+60889315 None:intergenic
AAAAGAAAATTGACAATGCT+TGG 0.419595 6.1:-60887257 MS.gene042758:CDS
TAGAGAAACTTCATGTAATC+CGG 0.427919 6.1:+60888510 None:intergenic
GTTTCTCTATAAACCACTCT+TGG 0.439981 6.1:-60888496 MS.gene042758:CDS
GCTCCAAAGCCTACATCAAA+AGG 0.450495 6.1:-60889153 MS.gene042758:CDS
TACGACTTCTTACATTGGAA+TGG 0.454510 6.1:-60887743 MS.gene042758:CDS
CACAAATGATATCTTCAATT+GGG 0.456797 6.1:-60887710 MS.gene042758:CDS
ACTACTCTGTCCCGTGCATA+AGG 0.457542 6.1:+60888979 None:intergenic
ACGACTTCTTACATTGGAAT+GGG 0.460983 6.1:-60887742 MS.gene042758:CDS
TTCCTTGCTTGACAATATTG+AGG 0.465049 6.1:+60888919 None:intergenic
GCCTCACATATGATGATTCA+TGG 0.465433 6.1:-60889398 MS.gene042758:CDS
ATTGACTCAATATGTCGTTT+GGG 0.473862 6.1:-60890291 MS.gene042758:CDS
ACCAAAATCAATGCTCATGT+TGG 0.476318 6.1:+60887063 None:intergenic
AGATGTATTCAACCAATTCA+AGG 0.477088 6.1:-60889486 MS.gene042758:CDS
GAGCAAGAAGTGAAGAAAGA+AGG 0.477567 6.1:-60888456 MS.gene042758:CDS
CGCAAGAGAAGGACTCAATT+GGG 0.484801 6.1:+60889316 None:intergenic
CCAAAATCAATGCTCATGTT+GGG 0.485248 6.1:+60887064 None:intergenic
CATGGTCTTTACATTTCACC+TGG 0.512141 6.1:-60890135 MS.gene042758:intron
AACATTGATCATAGATGTTG+AGG 0.512550 6.1:-60889441 MS.gene042758:CDS
AACAATATCAAGTGGTTACC+CGG 0.513550 6.1:-60887773 MS.gene042758:CDS
ATCAATGCTCATGTTGGGAT+GGG 0.522554 6.1:+60887069 None:intergenic
ATATAGGTGGTGGAAGGAGT+TGG 0.524102 6.1:-60889019 MS.gene042758:intron
AGCCTCAATATTGTCAAGCA+AGG 0.528176 6.1:-60888921 MS.gene042758:CDS
CTGTGCTATTTAGGGTGTTG+AGG 0.528533 6.1:-60890161 MS.gene042758:CDS
AATCAATGCTCATGTTGGGA+TGG 0.533171 6.1:+60887068 None:intergenic
TGGCCTCACTCATGTAAGCT+TGG 0.536408 6.1:+60887848 None:intergenic
ATCAAGTGGTTACCCGGTGT+TGG 0.539295 6.1:-60887767 MS.gene042758:CDS
TTGACTTGTGTCGCAAGAGA+AGG 0.540007 6.1:+60889305 None:intergenic
GATTTCCACCCTAGCGTTTG+GGG 0.542721 6.1:-60890951 MS.gene042758:CDS
TTGTCAAGCAAGGAAAATGA+TGG 0.545763 6.1:-60888911 MS.gene042758:CDS
GCAAATTGATAAACTAAAAG+AGG 0.546970 6.1:-60890370 MS.gene042758:CDS
TAGCTTCTTGCCTCTAGCCT+AGG 0.554871 6.1:+60889248 None:intergenic
ATACTTGGAATGTTATATGA+GGG 0.559157 6.1:-60887319 MS.gene042758:CDS
GACAAGCAAATCATTAATGT+AGG 0.560101 6.1:+60887095 None:intergenic
GGAATTTGATATAAATATTG+CGG 0.567112 6.1:-60890394 MS.gene042758:CDS
TTTAGGGTGTTGAGGCAACA+TGG 0.568035 6.1:-60890153 MS.gene042758:CDS
AATGGAGAAATAACTCTCAA+AGG 0.571243 6.1:-60890201 MS.gene042758:CDS
TTGGCTACGACTTCTTACAT+TGG 0.575246 6.1:-60887748 MS.gene042758:CDS
AAGCTTACATGAGTGAGGCC+AGG 0.576657 6.1:-60887846 MS.gene042758:CDS
ATAGCACAGAAATAGAATGA+AGG 0.580450 6.1:+60890175 None:intergenic
GATGACACGTATGATGCATA+CGG 0.587584 6.1:-60888859 MS.gene042758:CDS
TAAGAAGTCGTAGCCAACAC+CGG 0.589439 6.1:+60887754 None:intergenic
AAGAAGTCGTAGCCAACACC+GGG 0.590372 6.1:+60887755 None:intergenic
ACCAAAGATTCTGAAGCATA+CGG 0.593001 6.1:+60890915 None:intergenic
ATTGGGTTGCAATTGACTCA+AGG 0.594526 6.1:+60889333 None:intergenic
AACACATCAACAATATCAAG+TGG 0.595383 6.1:-60887781 MS.gene042758:CDS
TCTTCATAAACATCCAAGAG+TGG 0.597368 6.1:+60888483 None:intergenic
ACATTGATCATAGATGTTGA+GGG 0.599537 6.1:-60889440 MS.gene042758:CDS
GACAACTACACACATTCTGA+AGG 0.603730 6.1:-60887129 MS.gene042758:CDS
TTTCCACCCTAGCGTTTGGG+GGG 0.604138 6.1:-60890949 MS.gene042758:CDS
TAATGAAATTCTACTTACGT+TGG 0.604203 6.1:-60889195 MS.gene042758:CDS
AACCAATTCAAGGACAAGCA+AGG 0.604565 6.1:-60889476 MS.gene042758:CDS
CTTTATATATAGGTGGTGGA+AGG 0.614852 6.1:-60889025 MS.gene042758:intron
ATTTCCACCCTAGCGTTTGG+GGG 0.619288 6.1:-60890950 MS.gene042758:CDS
AAACCTCAATAAAACGCGAA+AGG 0.623927 6.1:+60887166 None:intergenic
TGCTTGGAAAGATATAAATG+AGG 0.630445 6.1:-60887241 MS.gene042758:CDS
ACCATGAATCATCATATGTG+AGG 0.641340 6.1:+60889397 None:intergenic
AATTGATAAACTAAAAGAGG+AGG 0.642973 6.1:-60890367 MS.gene042758:CDS
ATAGTTAACATTCAACCACC+TGG 0.654774 6.1:+60887828 None:intergenic
GGATGAAATTGTGTCTAGCG+AGG 0.663791 6.1:-60887635 MS.gene042758:intron
AGTCCAAGCTTACATGAGTG+AGG 0.665674 6.1:-60887851 MS.gene042758:CDS
GGGTTGCAATTGACTCAAGG+TGG 0.669237 6.1:+60889336 None:intergenic
CTTACATGAGTGAGGCCAGG+TGG 0.678940 6.1:-60887843 MS.gene042758:CDS
TAACTATATACCAACAACAG+AGG 0.706002 6.1:-60887812 MS.gene042758:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! GAAAATATATATATATTACA+AGG + chr6.1:60887546-60887565 None:intergenic 10.0%
!! TAATATAAACATCTAAAAAA+TGG - chr6.1:60888142-60888161 MS.gene042758:intron 10.0%
!!! AATTTAATTTTAAATTAAGG+AGG + chr6.1:60888981-60889000 None:intergenic 10.0%
!!! ATTATATTTTTGATATCATT+AGG - chr6.1:60888371-60888390 MS.gene042758:intron 10.0%
!!! ATTTAATTTTAAATTAAGGA+GGG + chr6.1:60888980-60888999 None:intergenic 10.0%
!!! TTTTATCATATATTTATACA+CGG - chr6.1:60889453-60889472 MS.gene042758:CDS 10.0%
!! AATATAATAAGATGACATAA+TGG - chr6.1:60890608-60890627 MS.gene042758:intron 15.0%
!! AATATAGTAGAATTGTTAAT+AGG + chr6.1:60890173-60890192 None:intergenic 15.0%
!! ATAAAGACCAAAAATATTAT+AGG + chr6.1:60889031-60889050 None:intergenic 15.0%
!! CATATTTACAAAAAATACAT+AGG - chr6.1:60890132-60890151 MS.gene042758:intron 15.0%
!! GAATCATTAATATAAATAAG+TGG + chr6.1:60887972-60887991 None:intergenic 15.0%
!! TATTATATTAACTCTTAAGA+CGG + chr6.1:60890597-60890616 None:intergenic 15.0%
!!! AATTTTTTAACTTTGATCAT+GGG - chr6.1:60888112-60888131 MS.gene042758:intron 15.0%
!!! ATTAAATAATAACTTTTAGG+TGG - chr6.1:60889391-60889410 MS.gene042758:CDS 15.0%
!!! TAAAATTTTATTCTGATAAC+AGG + chr6.1:60889763-60889782 None:intergenic 15.0%
!!! TAATTTTTTAACTTTGATCA+TGG - chr6.1:60888111-60888130 MS.gene042758:intron 15.0%
!!! TATTTTTGGTCTTTATATAT+AGG - chr6.1:60889035-60889054 MS.gene042758:intron 15.0%
!!! TGATTGTTTTTACATAAAAT+AGG - chr6.1:60888274-60888293 MS.gene042758:intron 15.0%
!!! TGTTATCAGAATAAAATTTT+AGG - chr6.1:60889762-60889781 MS.gene042758:intron 15.0%
!!! TTGTAATGAAAATGAATTTT+AGG - chr6.1:60889510-60889529 MS.gene042758:intron 15.0%
!! AATTAAGATAATGTATAGTG+TGG + chr6.1:60888455-60888474 None:intergenic 20.0%
!! GGAATTTGATATAAATATTG+CGG - chr6.1:60887676-60887695 MS.gene042758:CDS 20.0%
!! GTAAAAAGATCCTATATTAT+TGG + chr6.1:60887576-60887595 None:intergenic 20.0%
!! TATGTTATGAAAAGTGATTA+AGG - chr6.1:60887246-60887265 MS.gene042758:CDS 20.0%
!!! AATGAAAATGAATTTTAGGT+GGG - chr6.1:60889514-60889533 MS.gene042758:intron 20.0%
!!! ACACTTAATTGTTATTTGAA+AGG + chr6.1:60887608-60887627 None:intergenic 20.0%
!!! ATTGTTCATTTTTGTAAACA+AGG - chr6.1:60890524-60890543 MS.gene042758:intron 20.0%
!!! ATTTTTTAACTTTGATCATG+GGG - chr6.1:60888113-60888132 MS.gene042758:intron 20.0%
!!! CTAATTGCCTATAATATTTT+TGG - chr6.1:60889021-60889040 MS.gene042758:intron 20.0%
!!! GTTTTTCTATCTCTAAATTT+TGG + chr6.1:60889326-60889345 None:intergenic 20.0%
!!! TAATGAAAATGAATTTTAGG+TGG - chr6.1:60889513-60889532 MS.gene042758:intron 20.0%
!!! TGTTTTTACATAAAATAGGA+AGG - chr6.1:60888278-60888297 MS.gene042758:intron 20.0%
!!! TTGTGATTAGAACATTTTTA+GGG - chr6.1:60889838-60889857 MS.gene042758:intron 20.0%
! AAAAGAAAATTGACAATGCT+TGG - chr6.1:60890813-60890832 MS.gene042758:intron 25.0%
! AATTGATAAACTAAAAGAGG+AGG - chr6.1:60887703-60887722 MS.gene042758:CDS 25.0%
! ACGTAAGTAGAATTTCATTA+TGG + chr6.1:60888875-60888894 None:intergenic 25.0%
! ATACTTGGAATGTTATATGA+GGG - chr6.1:60890751-60890770 MS.gene042758:intron 25.0%
! ATATAAATGAGGAATGTCTT+AGG - chr6.1:60890840-60890859 MS.gene042758:intron 25.0%
! CAAATGTGTAATATCTATGT+TGG + chr6.1:60887432-60887451 None:intergenic 25.0%
! CACAAATGATATCTTCAATT+GGG - chr6.1:60890360-60890379 MS.gene042758:CDS 25.0%
! CGTAAGTAGAATTTCATTAT+GGG + chr6.1:60888874-60888893 None:intergenic 25.0%
! CGTTGTTACTAAAAATGTAA+AGG + chr6.1:60888180-60888199 None:intergenic 25.0%
! GAATAAAACCAAGAGAAAAT+AGG - chr6.1:60887306-60887325 MS.gene042758:CDS 25.0%
! GATCTATGTATGTATCTATA+CGG + chr6.1:60889808-60889827 None:intergenic 25.0%
! GCAAATTGATAAACTAAAAG+AGG - chr6.1:60887700-60887719 MS.gene042758:CDS 25.0%
! GCAATGTTAGTAATATTAAG+TGG + chr6.1:60887490-60887509 None:intergenic 25.0%
! GTCATCAATGTATGATAAAA+TGG + chr6.1:60889197-60889216 None:intergenic 25.0%
! GTTGTTCACGTAAAAAAAAA+GGG + chr6.1:60887193-60887212 None:intergenic 25.0%
! TAATGAAATTCTACTTACGT+TGG - chr6.1:60888875-60888894 MS.gene042758:CDS 25.0%
! TATAATTATGTAAAGAACCG+AGG + chr6.1:60888357-60888376 None:intergenic 25.0%
! TGTTGTTCACGTAAAAAAAA+AGG + chr6.1:60887194-60887213 None:intergenic 25.0%
! TTATATGAGGGAATATGATA+TGG - chr6.1:60890763-60890782 MS.gene042758:intron 25.0%
! TTCAAGAATGCCAATAATAT+AGG - chr6.1:60887563-60887582 MS.gene042758:intron 25.0%
!! AGACGAAATTAATCAAGTTT+TGG - chr6.1:60887820-60887839 MS.gene042758:CDS 25.0%
!! CTTGTGATTAGAACATTTTT+AGG - chr6.1:60889837-60889856 MS.gene042758:intron 25.0%
!! TGAGTTAGAACTTTTTACTA+AGG - chr6.1:60889243-60889262 MS.gene042758:CDS 25.0%
!! TTTTGTTGAACTATTGTCTA+CGG + chr6.1:60890092-60890111 None:intergenic 25.0%
!! TTTTTACTAAGGCAATTGAA+AGG - chr6.1:60889254-60889273 MS.gene042758:CDS 25.0%
!!! AAGCATTGTCAATTTTCTTT+TGG + chr6.1:60890814-60890833 None:intergenic 25.0%
!!! ATTCTATTTCTGTGCTATTT+AGG - chr6.1:60887900-60887919 MS.gene042758:intron 25.0%
!!! TATTTTTGATATCATTAGGC+CGG - chr6.1:60888375-60888394 MS.gene042758:intron 25.0%
!!! TGTGATTAGAACATTTTTAG+GGG - chr6.1:60889839-60889858 MS.gene042758:intron 25.0%
!!! TTCTATTTCTGTGCTATTTA+GGG - chr6.1:60887901-60887920 MS.gene042758:intron 25.0%
!!! TTCTTTTAAGAAGTGGTTAA+TGG + chr6.1:60889651-60889670 None:intergenic 25.0%
!!! TTTTGGTCTTTATATATAGG+TGG - chr6.1:60889038-60889057 MS.gene042758:intron 25.0%
AACACATCAACAATATCAAG+TGG - chr6.1:60890289-60890308 MS.gene042758:CDS 30.0%
AACATTGATCATAGATGTTG+AGG - chr6.1:60888629-60888648 MS.gene042758:intron 30.0%
AAGGTTCTTCCTTAATAAGA+TGG + chr6.1:60888417-60888436 None:intergenic 30.0%
AATGGAGAAATAACTCTCAA+AGG - chr6.1:60887869-60887888 MS.gene042758:intron 30.0%
ACATTGATCATAGATGTTGA+GGG - chr6.1:60888630-60888649 MS.gene042758:intron 30.0%
AGATGTATTCAACCAATTCA+AGG - chr6.1:60888584-60888603 MS.gene042758:intron 30.0%
ATAGCACAGAAATAGAATGA+AGG + chr6.1:60887898-60887917 None:intergenic 30.0%
CAAAAAATACATAGGAGTTC+AGG - chr6.1:60890140-60890159 MS.gene042758:CDS 30.0%
CATACTTGGAATGTTATATG+AGG - chr6.1:60890750-60890769 MS.gene042758:intron 30.0%
CCAATTGAAGATATCATTTG+TGG + chr6.1:60890362-60890381 None:intergenic 30.0%
CCACAAATGATATCTTCAAT+TGG - chr6.1:60890359-60890378 MS.gene042758:CDS 30.0%
CTAAAAAACTACCTTATGCA+CGG - chr6.1:60889080-60889099 MS.gene042758:intron 30.0%
GACAAGCAAATCATTAATGT+AGG + chr6.1:60890978-60890997 None:intergenic 30.0%
GATAACATTACACGGATAAT+GGG + chr6.1:60888335-60888354 None:intergenic 30.0%
GTTTCACACAATATTCTTTG+TGG - chr6.1:60890481-60890500 MS.gene042758:intron 30.0%
TAAAAAACTACCTTATGCAC+GGG - chr6.1:60889081-60889100 MS.gene042758:intron 30.0%
TAACTATATACCAACAACAG+AGG - chr6.1:60890258-60890277 MS.gene042758:CDS 30.0%
TAAGTGGAGATATAAATACC+AGG + chr6.1:60887956-60887975 None:intergenic 30.0%
TAGAGAAACTTCATGTAATC+CGG + chr6.1:60889563-60889582 None:intergenic 30.0%
TGCTTGGAAAGATATAAATG+AGG - chr6.1:60890829-60890848 MS.gene042758:intron 30.0%
TTAATTATACGATCCAAGTG+TGG + chr6.1:60887463-60887482 None:intergenic 30.0%
TTGAGTAAAACAAACTTGTG+TGG - chr6.1:60888020-60888039 MS.gene042758:intron 30.0%
! AAACGTAATGGAACTTTAGT+TGG + chr6.1:60890866-60890885 None:intergenic 30.0%
! AGGATTTCCAACATTTTTGA+GGG - chr6.1:60887396-60887415 MS.gene042758:intron 30.0%
! ATTGACTCAATATGTCGTTT+GGG - chr6.1:60887779-60887798 MS.gene042758:CDS 30.0%
! ATTTTAAATTAAGGAGGGTG+TGG + chr6.1:60888975-60888994 None:intergenic 30.0%
! CACAAGGATTTTGTTCAAAA+TGG - chr6.1:60887851-60887870 MS.gene042758:CDS 30.0%
! CATTTTGAACAAAATCCTTG+TGG + chr6.1:60887853-60887872 None:intergenic 30.0%
! GATTCATGGTGAGAAAATTT+TGG - chr6.1:60888686-60888705 MS.gene042758:intron 30.0%
! GTTGGTTATTTGTTAGCAAT+AGG - chr6.1:60887355-60887374 MS.gene042758:intron 30.0%
! TAGGATTTCCAACATTTTTG+AGG - chr6.1:60887395-60887414 MS.gene042758:intron 30.0%
! TTCCAAATTCCTTTTGATGT+AGG + chr6.1:60888929-60888948 None:intergenic 30.0%
! TTCTAATCACAAGATTTGCT+AGG + chr6.1:60889830-60889849 None:intergenic 30.0%
! TTTCTTTTGGCATTCTTGAA+TGG + chr6.1:60890801-60890820 None:intergenic 30.0%
!! CTCTTACTTCTTTTAAGAAG+TGG + chr6.1:60889658-60889677 None:intergenic 30.0%
!! GGATAATGGGTTGTTTAATA+TGG + chr6.1:60888322-60888341 None:intergenic 30.0%
!!! AGTAGTAGAATGTTGCTTTT+GGG - chr6.1:60889108-60889127 MS.gene042758:intron 30.0%
!!! TGCATGTTTTGATTACATAC+AGG - chr6.1:60887655-60887674 MS.gene042758:CDS 30.0%
AAAATAGGAAGGATCATCGT+AGG - chr6.1:60888289-60888308 MS.gene042758:intron 35.0%
AAACAGTTCGAGCAAAAAAG+AGG - chr6.1:60890716-60890735 MS.gene042758:intron 35.0%
AAACCTCAATAAAACGCGAA+AGG + chr6.1:60890907-60890926 None:intergenic 35.0%
AACAATATCAAGTGGTTACC+CGG - chr6.1:60890297-60890316 MS.gene042758:CDS 35.0%
ACACACGTCAAAAAACGTAA+TGG + chr6.1:60890878-60890897 None:intergenic 35.0%
ACCATGAATCATCATATGTG+AGG + chr6.1:60888676-60888695 None:intergenic 35.0%
ACGACTTCTTACATTGGAAT+GGG - chr6.1:60890328-60890347 MS.gene042758:CDS 35.0%
AGCCTACATCAAAAGGAATT+TGG - chr6.1:60888924-60888943 MS.gene042758:CDS 35.0%
ATAGGGTAGCCATCTTATTA+AGG - chr6.1:60888405-60888424 MS.gene042758:intron 35.0%
ATAGTTAACATTCAACCACC+TGG + chr6.1:60890245-60890264 None:intergenic 35.0%
ATGATTGTTCAACATTGTCG+TGG - chr6.1:60888543-60888562 MS.gene042758:intron 35.0%
CTAACAAATAACCAACCCTT+TGG + chr6.1:60887351-60887370 None:intergenic 35.0%
GGATAACATTACACGGATAA+TGG + chr6.1:60888336-60888355 None:intergenic 35.0%
GTTTCTCTATAAACCACTCT+TGG - chr6.1:60889574-60889593 MS.gene042758:intron 35.0%
TAATAAGATGGCTACCCTAT+AGG + chr6.1:60888405-60888424 None:intergenic 35.0%
TACGACTTCTTACATTGGAA+TGG - chr6.1:60890327-60890346 MS.gene042758:CDS 35.0%
TAGGTGGGATATTAGTTGTT+TGG - chr6.1:60889529-60889548 MS.gene042758:intron 35.0%
TAGTTGTTTGGATGATCTTC+CGG - chr6.1:60889541-60889560 MS.gene042758:intron 35.0%
TATCCGTGTAATGTTATCCT+CGG - chr6.1:60888337-60888356 MS.gene042758:intron 35.0%
TCTACTTACGTTGGCAAAAT+TGG - chr6.1:60888884-60888903 MS.gene042758:CDS 35.0%
TCTTCATAAACATCCAAGAG+TGG + chr6.1:60889590-60889609 None:intergenic 35.0%
TGGTCTTTATATATAGGTGG+TGG - chr6.1:60889041-60889060 MS.gene042758:intron 35.0%
TTAGCAATAGGAATGAAACC+TGG - chr6.1:60887367-60887386 MS.gene042758:intron 35.0%
TTCCTTGCTTGACAATATTG+AGG + chr6.1:60889154-60889173 None:intergenic 35.0%
TTGTCAAGCAAGGAAAATGA+TGG - chr6.1:60889159-60889178 MS.gene042758:CDS 35.0%
! ATTCCTTTTGATGTAGGCTT+TGG + chr6.1:60888923-60888942 None:intergenic 35.0%
! GATTGACTCAATATGTCGTT+TGG - chr6.1:60887778-60887797 MS.gene042758:CDS 35.0%
! GCAGCAGCATTAACAATTTT+CGG + chr6.1:60890397-60890416 None:intergenic 35.0%
! TCCTTTTCCCTCAAAAATGT+TGG + chr6.1:60887406-60887425 None:intergenic 35.0%
!! ACCAAAGATTCTGAAGCATA+CGG + chr6.1:60887158-60887177 None:intergenic 35.0%
!! CTTTATATATAGGTGGTGGA+AGG - chr6.1:60889045-60889064 MS.gene042758:intron 35.0%
!! GAAAATTTTGGAAGAGGCAT+TGG - chr6.1:60888698-60888717 MS.gene042758:intron 35.0%
!! GTGGTTCTAGAGTATGAAAA+AGG + chr6.1:60888436-60888455 None:intergenic 35.0%
!! TAGCTCTACCTATTTTCTCT+TGG + chr6.1:60887317-60887336 None:intergenic 35.0%
!! TCCAACATTTTTGAGGGAAA+AGG - chr6.1:60887402-60887421 MS.gene042758:intron 35.0%
!! TGGTGAGAAAATTTTGGAAG+AGG - chr6.1:60888692-60888711 MS.gene042758:intron 35.0%
!!! AGTTTTGGAAGATATCCACA+AGG - chr6.1:60887835-60887854 MS.gene042758:CDS 35.0%
!!! ATGTTGCTTTTGGGTTATGA+CGG - chr6.1:60889117-60889136 MS.gene042758:intron 35.0%
!!! GAGTAGTAGAATGTTGCTTT+TGG - chr6.1:60889107-60889126 MS.gene042758:intron 35.0%
AACCAATTCAAGGACAAGCA+AGG - chr6.1:60888594-60888613 MS.gene042758:intron 40.0%
ACTAACATTGCACACTCCAA+AGG - chr6.1:60887499-60887518 MS.gene042758:intron 40.0%
AGCCTCAATATTGTCAAGCA+AGG - chr6.1:60889149-60889168 MS.gene042758:CDS 40.0%
AGCTATAGCAAACACTCCAA+AGG - chr6.1:60887332-60887351 MS.gene042758:CDS 40.0%
CATGGTCTTTACATTTCACC+TGG - chr6.1:60887935-60887954 MS.gene042758:intron 40.0%
CTAACATTGCACACTCCAAA+GGG - chr6.1:60887500-60887519 MS.gene042758:intron 40.0%
CTTGCGACACAAGTCAAATA+TGG - chr6.1:60888771-60888790 MS.gene042758:intron 40.0%
GAACCGAGGATAACATTACA+CGG + chr6.1:60888343-60888362 None:intergenic 40.0%
GACAACTACACACATTCTGA+AGG - chr6.1:60890941-60890960 MS.gene042758:CDS 40.0%
GAGCAAGAAGTGAAGAAAGA+AGG - chr6.1:60889614-60889633 MS.gene042758:intron 40.0%
GATGACACGTATGATGCATA+CGG - chr6.1:60889211-60889230 MS.gene042758:CDS 40.0%
GCCTCACATATGATGATTCA+TGG - chr6.1:60888672-60888691 MS.gene042758:intron 40.0%
GCTATAGCAAACACTCCAAA+GGG - chr6.1:60887333-60887352 MS.gene042758:CDS 40.0%
GGATGAATCTTGCTCATAGA+TGG + chr6.1:60888853-60888872 None:intergenic 40.0%
GTATGTATCTATACGGAGAG+TGG + chr6.1:60889801-60889820 None:intergenic 40.0%
GTGAGTAACTTGAATCCCTT+TGG + chr6.1:60887518-60887537 None:intergenic 40.0%
GTTGGAAATCCTAAAACACC+AGG + chr6.1:60887388-60887407 None:intergenic 40.0%
TCCGTATGCTTCAGAATCTT+TGG - chr6.1:60887154-60887173 MS.gene042758:CDS 40.0%
TTATACGATCCAAGTGTGGT+TGG + chr6.1:60887459-60887478 None:intergenic 40.0%
TTCATGTACTCCTCTGTTGT+TGG + chr6.1:60890271-60890290 None:intergenic 40.0%
TTCCTTGCTTGTCCTTGAAT+TGG + chr6.1:60888599-60888618 None:intergenic 40.0%
TTGGCTACGACTTCTTACAT+TGG - chr6.1:60890322-60890341 MS.gene042758:CDS 40.0%
! AGGACATGTTGCTTCATACT+TGG - chr6.1:60890736-60890755 MS.gene042758:intron 40.0%
! ATTAGGCCGGTTTACCTATA+GGG - chr6.1:60888388-60888407 MS.gene042758:intron 40.0%
! ATTGGGTTGCAATTGACTCA+AGG + chr6.1:60888740-60888759 None:intergenic 40.0%
! GGAATGAAACCTGGTGTTTT+AGG - chr6.1:60887376-60887395 MS.gene042758:intron 40.0%
!! CAACCTTTCGCGTTTTATTG+AGG - chr6.1:60890901-60890920 MS.gene042758:intron 40.0%
AGATTTCCACCCTAGCGTTT+GGG - chr6.1:60887118-60887137 MS.gene042758:CDS 45.0%
AGGAAGGATCATCGTAGGAT+CGG - chr6.1:60888294-60888313 MS.gene042758:intron 45.0%
AGTCCAAGCTTACATGAGTG+AGG - chr6.1:60890219-60890238 MS.gene042758:CDS 45.0%
ATTTGCACACCAACCACACT+TGG - chr6.1:60887447-60887466 MS.gene042758:intron 45.0%
CAAAAACTTGCCTAGGCTAG+AGG - chr6.1:60888812-60888831 MS.gene042758:intron 45.0%
CGCAAGAGAAGGACTCAATT+GGG + chr6.1:60888757-60888776 None:intergenic 45.0%
CTCTGCACAAAAACTTGCCT+AGG - chr6.1:60888805-60888824 MS.gene042758:intron 45.0%
GCTCCAAAGCCTACATCAAA+AGG - chr6.1:60888917-60888936 MS.gene042758:CDS 45.0%
GGATGAAATTGTGTCTAGCG+AGG - chr6.1:60890435-60890454 MS.gene042758:intron 45.0%
TAAGAAGTCGTAGCCAACAC+CGG + chr6.1:60890319-60890338 None:intergenic 45.0%
TAGCAAACACTCCAAAGGGT+TGG - chr6.1:60887337-60887356 MS.gene042758:CDS 45.0%
TCGCAAGAGAAGGACTCAAT+TGG + chr6.1:60888758-60888777 None:intergenic 45.0%
TGCTGTTCATTGCAGGCTTA+GGG - chr6.1:60890414-60890433 MS.gene042758:intron 45.0%
TGGCTACCCTATAGGTAAAC+CGG + chr6.1:60888397-60888416 None:intergenic 45.0%
! CATTAGGCCGGTTTACCTAT+AGG - chr6.1:60888387-60888406 MS.gene042758:intron 45.0%
! CTAGGCAAGTTTTTGTGCAG+AGG + chr6.1:60888807-60888826 None:intergenic 45.0%
!! ATATAGGTGGTGGAAGGAGT+TGG - chr6.1:60889051-60889070 MS.gene042758:intron 45.0%
!! CTGTGCTATTTAGGGTGTTG+AGG - chr6.1:60887909-60887928 MS.gene042758:intron 45.0%
!! TTGACTTGTGTCGCAAGAGA+AGG + chr6.1:60888768-60888787 None:intergenic 45.0%
!! TTTAGGGTGTTGAGGCAACA+TGG - chr6.1:60887917-60887936 MS.gene042758:intron 45.0%
!!! GAGGCATTGGCTTTTACTTC+TGG - chr6.1:60888711-60888730 MS.gene042758:intron 45.0%
!! TTTAAAAAAAGATTATATAT+TGG - chr6.1:60890054-60890073 MS.gene042758:intron 5.0%
!!! AAAATTAAATAATAACTTTT+AGG - chr6.1:60889388-60889407 MS.gene042758:CDS 5.0%
!!! TCATTTTTTATATTTTAATT+TGG - chr6.1:60887990-60888009 MS.gene042758:intron 5.0%
!!! TTCAATTTAATTTTAAATTA+AGG + chr6.1:60888984-60889003 None:intergenic 5.0%
AAGAAGTCGTAGCCAACACC+GGG + chr6.1:60890318-60890337 None:intergenic 50.0%
AAGCTTACATGAGTGAGGCC+AGG - chr6.1:60890224-60890243 MS.gene042758:CDS 50.0%
ACTACTCTGTCCCGTGCATA+AGG + chr6.1:60889094-60889113 None:intergenic 50.0%
ATCAAGTGGTTACCCGGTGT+TGG - chr6.1:60890303-60890322 MS.gene042758:CDS 50.0%
ATGCTGCTGCTGTTCATTGC+AGG - chr6.1:60890407-60890426 MS.gene042758:intron 50.0%
ATTTCCACCCTAGCGTTTGG+GGG - chr6.1:60887120-60887139 MS.gene042758:CDS 50.0%
CAGATTTCCACCCTAGCGTT+TGG - chr6.1:60887117-60887136 MS.gene042758:CDS 50.0%
CTGCTGTTCATTGCAGGCTT+AGG - chr6.1:60890413-60890432 MS.gene042758:intron 50.0%
GATTTCCACCCTAGCGTTTG+GGG - chr6.1:60887119-60887138 MS.gene042758:CDS 50.0%
TAGCTTCTTGCCTCTAGCCT+AGG + chr6.1:60888825-60888844 None:intergenic 50.0%
TGGCCTCACTCATGTAAGCT+TGG + chr6.1:60890225-60890244 None:intergenic 50.0%
! GGGTTGCAATTGACTCAAGG+TGG + chr6.1:60888737-60888756 None:intergenic 50.0%
AAGAAGTCCCCCCAAACGCT+AGG + chr6.1:60887131-60887150 None:intergenic 55.0%
AGAAGTCCCCCCAAACGCTA+GGG + chr6.1:60887130-60887149 None:intergenic 55.0%
CTTACATGAGTGAGGCCAGG+TGG - chr6.1:60890227-60890246 MS.gene042758:CDS 55.0%
TTTCCACCCTAGCGTTTGGG+GGG - chr6.1:60887121-60887140 MS.gene042758:CDS 55.0%
AGTCCCCCCAAACGCTAGGG+TGG + chr6.1:60887127-60887146 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr6.1 gene 60887077 60891015 60887077 ID=MS.gene042758
chr6.1 mRNA 60887077 60891015 60887077 ID=MS.gene042758.t1;Parent=MS.gene042758
chr6.1 exon 60890917 60891015 60890917 ID=MS.gene042758.t1.exon1;Parent=MS.gene042758.t1
chr6.1 CDS 60890917 60891015 60890917 ID=cds.MS.gene042758.t1;Parent=MS.gene042758.t1
chr6.1 exon 60890136 60890415 60890136 ID=MS.gene042758.t1.exon2;Parent=MS.gene042758.t1
chr6.1 CDS 60890136 60890415 60890136 ID=cds.MS.gene042758.t1;Parent=MS.gene042758.t1
chr6.1 exon 60889134 60889506 60889134 ID=MS.gene042758.t1.exon3;Parent=MS.gene042758.t1
chr6.1 CDS 60889134 60889506 60889134 ID=cds.MS.gene042758.t1;Parent=MS.gene042758.t1
chr6.1 exon 60888817 60889035 60888817 ID=MS.gene042758.t1.exon4;Parent=MS.gene042758.t1
chr6.1 CDS 60888817 60889035 60888817 ID=cds.MS.gene042758.t1;Parent=MS.gene042758.t1
chr6.1 exon 60888422 60888560 60888422 ID=MS.gene042758.t1.exon5;Parent=MS.gene042758.t1
chr6.1 CDS 60888422 60888560 60888422 ID=cds.MS.gene042758.t1;Parent=MS.gene042758.t1
chr6.1 exon 60887636 60887884 60887636 ID=MS.gene042758.t1.exon6;Parent=MS.gene042758.t1
chr6.1 CDS 60887636 60887884 60887636 ID=cds.MS.gene042758.t1;Parent=MS.gene042758.t1
chr6.1 exon 60887077 60887370 60887077 ID=MS.gene042758.t1.exon7;Parent=MS.gene042758.t1
chr6.1 CDS 60887077 60887370 60887077 ID=cds.MS.gene042758.t1;Parent=MS.gene042758.t1
Gene Sequence

>MS.gene042758

ATGTCTCATAACGAGAAATCAGTTTTGCAAAGAAATGTTGCAGATTTCCACCCTAGCGTTTGGGGGGACTTCTTCATTCCGTATGCTTCAGAATCTTTGGTACGTATAGAATGCCCTTTTTTTTTACGTGAACAACAATGATTTTTTTTAAAGATCAACAACAATGATATATGTTATGAAAAGTGATTAAGGAGTTCTAGAAACACTATCTTTCTCATATTTCACTCTAGAATAAAACCAAGAGAAAATAGGTAGAGCTATAGCAAACACTCCAAAGGGTTGGTTATTTGTTAGCAATAGGAATGAAACCTGGTGTTTTAGGATTTCCAACATTTTTGAGGGAAAAGGATTTCCAACATAGATATTACACATTTGCACACCAACCACACTTGGATCGTATAATTAATAAACCACTTAATATTACTAACATTGCACACTCCAAAGGGATTCAAGTTACTCACATTTACCTTGTAATATATATATATTTTCAAGAATGCCAATAATATAGGATCTTTTTACTAAATGCATCCTTTCAAATAACAATTAAGTGTCATTTATCAATTAATTTTAAAATCATATGCATGTTTTGATTACATACAGGAATTTGATATAAATATTGCGGCGCAAATTGATAAACTAAAAGAGGAGGTTAGACAAATGCTTGTCTCAAAAATTGAGAATCTGTTGAAAAAAGTCAACTTGATTGACTCAATATGTCGTTTGGGTGTGAGCTATTATTTTGAAGACGAAATTAATCAAGTTTTGGAAGATATCCACAAGGATTTTGTTCAAAATGGAGAAATAACTCTCAAAGGCAACCTTCATTCTATTTCTGTGCTATTTAGGGTGTTGAGGCAACATGGTCTTTACATTTCACCTGGTATTTATATCTCCACTTATTTATATTAATGATTCATTTTTTATATTTTAATTTGGATCACTATTGAGTAAAACAAACTTGTGTGGTAGTTTTTAGTTTTTTTTTTTTTTTTTTTTAAATTCTAATCGTCAAATTAATACTTTAGTTTACAACATAATTTTTTAACTTTGATCATGGGGAGTAGCTAATATAAACATCTAAAAAATGGTTTAAGTATAGACCTTTACATTTTTAGTAACAACGAGAGTTTTATAATACTAAAAATTAAAGAATAACATAAGTATTTAACTTTTTCTTGCATTAAAAAAAAAAAAAGATGATTGTTTTTACATAAAATAGGAAGGATCATCGTAGGATCGGATCCATATTAAACAACCCATTATCCGTGTAATGTTATCCTCGGTTCTTTACATAATTATATTTTTGATATCATTAGGCCGGTTTACCTATAGGGTAGCCATCTTATTAAGGAAGAACCTTTTTCATACTCTAGAACCACACTATACATTATCTTAATTGCTTATTGAATTTTTTAATCTTGTTTTAGTTTCTTATTTACGTATACTTATAAATTAAAACATCTCTAATGATTGTTCAACATTGTCGTGGTTTTCTAATAAAAATATTAGATGTATTCAACCAATTCAAGGACAAGCAAGGAAATTTTAATGAAACATTGATCATAGATGTTGAGGGCATGTTAAACTTGTATGAAGCCTCACATATGATGATTCATGGTGAGAAAATTTTGGAAGAGGCATTGGCTTTTACTTCTGGCCACCTTGAGTCAATTGCAACCCAATTGAGTCCTTCTCTTGCGACACAAGTCAAATATGGCTTAAGACATCCTCTGCACAAAAACTTGCCTAGGCTAGAGGCAAGAAGCTACATTTCCATCTATGAGCAAGATTCATCCCATAATGAAATTCTACTTACGTTGGCAAAATTGGATTTTAATATGCTCCAAAGCCTACATCAAAAGGAATTTGGAAACATTTGCAAGTAAGCACTATATCCACACCCTCCTTAATTTAAAATTAAATTGAATTCAAAAACTAACTACTCTAATTGCCTATAATATTTTTGGTCTTTATATATAGGTGGTGGAAGGAGTTGGACATTGCTAAAAAACTACCTTATGCACGGGACAGAGTAGTAGAATGTTGCTTTTGGGTTATGACGGTATATTTTGAGCCTCAATATTGTCAAGCAAGGAAAATGATGGCAAAAGTAATCTCCATTTTATCATACATTGATGACACGTATGATGCATACGGAACAATTGATGAGTTAGAACTTTTTACTAAGGCAATTGAAAGGTTAGCACATCATATAAACTCAATAGAAAAAATAATCAAATAAGCAACCAAAATTTAGAGATAGAAAAACTTGAAATTTATCTGTAATTAAGTATTGAAATTAAGTGATGATAAAATTAAATAATAACTTTTAGGTGGTTGCTAATTCTATTTTTTTTAAAAGTAAAATAGACTTTTTTTTATCATATATTTATACACGGTCTAATTTTGTCAACAAAAGTGTAACAATTAATATTGTAATGAAAATGAATTTTAGGTGGGATATTAGTTGTTTGGATGATCTTCCGGATTACATGAAGTTTCTCTATAAACCACTCTTGGATGTTTATGAAGAAATTGAGCAAGAAGTGAAGAAAGAAGGAAGAGTATACGCCATTAACCACTTCTTAAAAGAAGTAAGAGTTTTATTTTATTGATAAAATTTGTTTCTTTTATTGATTTAATTTATTAAACAAACAAACAAATATTTCATTTTCAATTTTATCCTGTTATCAGAATAAAATTTTAGGATTTGATTTGCATCCACTCTCCGTATAGATACATACATAGATCCTAGCAAATCTTGTGATTAGAACATTTTTAGGGGTTTTGTTGAAATTGACATTATAGAGTATCAACATGATGTTATTTGATTGAAAGTAAATGTTAAACATATTTATACTATCAATGCATAAAAACTAGTTTAAATAACTTTTTATTAGTTGTTTTATGAACTCAATTTGTAGTAATTACTATAAGAAATTTTGTTCTGTCAGAATTAGCTTTTTTGTAATTTTAATTTAAAAAAAGATTATATATTGGCAGTTTAATTAACCGTAGACAATAGTTCAACAAAATTTCGAATACAATTTGACATCATATTTACAAAAAATACATAGGAGTTCAGGTACATAACCTATTAACAATTCTACTATATTTTATAACAATGACAGTTCAAAAATATAGTCCAAGCTTACATGAGTGAGGCCAGGTGGTTGAATGTTAACTATATACCAACAACAGAGGAGTACATGAACACATCAACAATATCAAGTGGTTACCCGGTGTTGGCTACGACTTCTTACATTGGAATGGGAAACATAGCCACAAATGATATCTTCAATTGGGTAACTAGTCATCCGAAAATTGTTAATGCTGCTGCTGTTCATTGCAGGCTTAGGGATGAAATTGTGTCTAGCGAGGTATTTTTTTTATCTAAATATATAGTTTCACACAATATTCTTTGTGGCTAATATATAAGAGATAATTATTGTTCATTTTTGTAAACAAGGTTAACACAACTGTCTAATTACAATTTACAAAGTTGATATTTTTGTAACCGTCTTAAGAGTTAATATAATAAGATGACATAATGGTGAAATGTGACTTTTACACTGTAACTGCATAGTCATTAAACTATTGATATATCTATTGTATCTCATAGTGTATATATTTTTTGATAAACAGTTCGAGCAAAAAAGAGGACATGTTGCTTCATACTTGGAATGTTATATGAGGGAATATGATATGGATAGAGAAGCTGCCATTCAAGAATGCCAAAAGAAAATTGACAATGCTTGGAAAGATATAAATGAGGAATGTCTTAGGCCAACTAAAGTTCCATTACGTTTTTTGACGTGTGTTCTCAACCTTTCGCGTTTTATTGAGGTTTTTTACAAAGATGAAGACAACTACACACATTCTGAAGGACTAATGAAGACCTACATTAATGATTTGCTTGTCAATCCCATCCCAACATGA
Protein sequence

>MS.gene042758.t1

MSHNEKSVLQRNVADFHPSVWGDFFIPYASESLEFDINIAAQIDKLKEEVRQMLVSKIENLLKKVNLIDSICRLGVSYYFEDEINQVLEDIHKDFVQNGEITLKGNLHSISVLFRVLRQHGLYISPDVFNQFKDKQGNFNETLIIDVEGMLNLYEASHMMIHGEKILEEALAFTSGHLESIATQLSPSLATQVKYGLRHPLHKNLPRLEARSYISIYEQDSSHNEILLTLAKLDFNMLQSLHQKEFGNICKWWKELDIAKKLPYARDRVVECCFWVMTVYFEPQYCQARKMMAKVISILSYIDDTYDAYGTIDELELFTKAIERWDISCLDDLPDYMKFLYKPLLDVYEEIEQEVKKEGRVYAINHFLKEFKNIVQAYMSEARWLNVNYIPTTEEYMNTSTISSGYPVLATTSYIGMGNIATNDIFNWVTSHPKIVNAAAVHCRLRDEIVSSEFEQKRGHVASYLECYMREYDMDREAAIQECQKKIDNAWKDINEECLRPTKVPLRFLTCVLNLSRFIEVFYKDEDNYTHSEGLMKTYINDLLVNPIPT