Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene038985.t1 | XP_004488753.1 | 73.5 | 573 | 146 | 2 | 3 | 575 | 18 | 584 | 8.80E-247 | 862.8 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene038985.t1 | Q93X23 | 54.5 | 563 | 250 | 3 | 15 | 573 | 34 | 594 | 2.7e-175 | 616.7 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene038985.t1 | A0A1S2XFX2 | 73.5 | 573 | 146 | 2 | 3 | 575 | 18 | 584 | 6.4e-247 | 862.8 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene038985.t1 | MTR_2g064425 | 72.632 | 570 | 150 | 2 | 4 | 572 | 21 | 585 | 0.0 | 861 |
MS.gene038985.t1 | MTR_8g057020 | 69.558 | 565 | 171 | 1 | 9 | 572 | 24 | 588 | 0.0 | 835 |
MS.gene038985.t1 | MTR_2g064425 | 70.351 | 570 | 148 | 3 | 4 | 572 | 21 | 570 | 0.0 | 823 |
MS.gene038985.t1 | MTR_2g065450 | 67.133 | 572 | 182 | 4 | 4 | 572 | 21 | 589 | 0.0 | 773 |
MS.gene038985.t1 | MTR_2g064425 | 71.429 | 392 | 106 | 2 | 4 | 394 | 21 | 407 | 0.0 | 572 |
MS.gene038985.t1 | MTR_2g064425 | 68.112 | 392 | 104 | 3 | 4 | 394 | 21 | 392 | 0.0 | 533 |
MS.gene038985.t1 | MTR_4g045810 | 45.796 | 559 | 282 | 9 | 21 | 570 | 32 | 578 | 1.55e-163 | 478 |
MS.gene038985.t1 | MTR_7g010710 | 38.192 | 542 | 320 | 9 | 40 | 571 | 17 | 553 | 8.02e-135 | 404 |
MS.gene038985.t1 | MTR_2g089120 | 36.444 | 568 | 339 | 9 | 10 | 572 | 14 | 564 | 2.61e-115 | 354 |
MS.gene038985.t1 | MTR_2g089130 | 39.627 | 482 | 284 | 4 | 92 | 572 | 88 | 563 | 5.62e-115 | 353 |
MS.gene038985.t1 | MTR_4g081460 | 34.991 | 543 | 342 | 7 | 40 | 573 | 22 | 562 | 1.74e-107 | 334 |
MS.gene038985.t1 | MTR_6g039440 | 33.034 | 557 | 359 | 10 | 26 | 573 | 2 | 553 | 6.86e-98 | 309 |
MS.gene038985.t1 | MTR_4g048460 | 34.182 | 550 | 350 | 8 | 33 | 573 | 15 | 561 | 7.66e-97 | 306 |
MS.gene038985.t1 | MTR_6g008560 | 32.731 | 553 | 359 | 9 | 31 | 573 | 8 | 557 | 1.40e-96 | 305 |
MS.gene038985.t1 | MTR_5g062230 | 33.031 | 551 | 357 | 7 | 31 | 573 | 7 | 553 | 9.86e-94 | 298 |
MS.gene038985.t1 | MTR_5g073200 | 33.883 | 546 | 348 | 9 | 38 | 573 | 7 | 549 | 3.88e-93 | 296 |
MS.gene038985.t1 | MTR_5g094620 | 32.169 | 544 | 350 | 6 | 33 | 573 | 10 | 537 | 2.71e-92 | 293 |
MS.gene038985.t1 | MTR_3g464190 | 33.211 | 545 | 353 | 7 | 38 | 573 | 15 | 557 | 5.85e-91 | 291 |
MS.gene038985.t1 | MTR_8g007515 | 32.288 | 542 | 353 | 8 | 45 | 574 | 18 | 557 | 5.34e-90 | 288 |
MS.gene038985.t1 | MTR_2g082010 | 30.570 | 579 | 375 | 11 | 10 | 576 | 8 | 571 | 1.19e-89 | 288 |
MS.gene038985.t1 | MTR_2g081980 | 31.284 | 553 | 358 | 9 | 38 | 574 | 12 | 558 | 5.09e-87 | 281 |
MS.gene038985.t1 | MTR_4g092010 | 32.800 | 500 | 322 | 7 | 63 | 553 | 48 | 542 | 1.40e-85 | 277 |
MS.gene038985.t1 | MTR_2g010960 | 32.233 | 515 | 333 | 7 | 67 | 567 | 5 | 517 | 5.63e-85 | 274 |
MS.gene038985.t1 | MTR_4g048460 | 36.807 | 451 | 274 | 7 | 33 | 475 | 15 | 462 | 2.02e-84 | 271 |
MS.gene038985.t1 | MTR_4g092020 | 31.836 | 512 | 329 | 9 | 67 | 568 | 65 | 566 | 1.22e-83 | 272 |
MS.gene038985.t1 | MTR_5g073260 | 31.810 | 547 | 359 | 9 | 38 | 573 | 9 | 552 | 1.53e-83 | 271 |
MS.gene038985.t1 | MTR_6g064980 | 31.703 | 511 | 336 | 7 | 67 | 567 | 5 | 512 | 2.54e-82 | 267 |
MS.gene038985.t1 | MTR_3g465090 | 31.641 | 512 | 335 | 9 | 67 | 567 | 5 | 512 | 7.09e-82 | 266 |
MS.gene038985.t1 | MTR_3g063170 | 31.445 | 512 | 336 | 9 | 67 | 567 | 5 | 512 | 1.45e-81 | 265 |
MS.gene038985.t1 | MTR_3g063120 | 32.449 | 490 | 318 | 6 | 89 | 567 | 1 | 488 | 2.33e-81 | 264 |
MS.gene038985.t1 | MTR_2g082060 | 30.526 | 570 | 358 | 13 | 26 | 576 | 6 | 556 | 3.50e-81 | 265 |
MS.gene038985.t1 | MTR_3g063140 | 31.189 | 513 | 336 | 9 | 67 | 567 | 5 | 512 | 5.55e-79 | 258 |
MS.gene038985.t1 | MTR_3g052120 | 31.262 | 515 | 339 | 9 | 64 | 567 | 2 | 512 | 1.34e-78 | 257 |
MS.gene038985.t1 | MTR_4g019550 | 29.825 | 570 | 351 | 13 | 31 | 573 | 11 | 558 | 1.17e-71 | 240 |
MS.gene038985.t1 | MTR_6g008560 | 31.762 | 403 | 271 | 4 | 173 | 573 | 1 | 401 | 2.70e-68 | 226 |
MS.gene038985.t1 | MTR_6g065040 | 32.512 | 406 | 262 | 7 | 162 | 561 | 2 | 401 | 7.98e-66 | 220 |
MS.gene038985.t1 | MTR_2g082050 | 27.835 | 485 | 289 | 8 | 92 | 570 | 27 | 456 | 1.86e-58 | 202 |
MS.gene038985.t1 | MTR_3g058160 | 28.000 | 450 | 289 | 13 | 91 | 511 | 65 | 508 | 1.99e-41 | 158 |
MS.gene038985.t1 | MTR_3g058160 | 28.000 | 450 | 289 | 13 | 91 | 511 | 256 | 699 | 8.09e-41 | 158 |
MS.gene038985.t1 | MTR_3g058160 | 28.000 | 450 | 289 | 13 | 91 | 511 | 276 | 719 | 8.39e-41 | 158 |
MS.gene038985.t1 | MTR_3g058160 | 28.000 | 450 | 289 | 13 | 91 | 511 | 269 | 712 | 9.56e-41 | 158 |
MS.gene038985.t1 | MTR_2g064295 | 26.905 | 420 | 275 | 11 | 91 | 483 | 256 | 670 | 7.49e-40 | 155 |
MS.gene038985.t1 | MTR_3g058160 | 26.752 | 471 | 289 | 13 | 91 | 511 | 276 | 740 | 5.17e-38 | 150 |
MS.gene038985.t1 | MTR_3g063160 | 29.720 | 286 | 193 | 4 | 67 | 346 | 5 | 288 | 1.19e-37 | 141 |
MS.gene038985.t1 | MTR_2g012900 | 29.909 | 438 | 255 | 17 | 88 | 483 | 251 | 678 | 3.27e-37 | 147 |
MS.gene038985.t1 | MTR_2g012870 | 28.710 | 411 | 261 | 10 | 98 | 483 | 261 | 664 | 3.99e-37 | 147 |
MS.gene038985.t1 | MTR_7g050990 | 40.972 | 144 | 76 | 1 | 219 | 362 | 29 | 163 | 7.04e-28 | 119 |
MS.gene038985.t1 | MTR_5g094530 | 28.708 | 209 | 114 | 2 | 186 | 393 | 4 | 178 | 1.70e-22 | 95.5 |
MS.gene038985.t1 | MTR_7g011663 | 28.626 | 262 | 156 | 7 | 94 | 325 | 349 | 609 | 5.04e-22 | 101 |
MS.gene038985.t1 | MTR_7g011770 | 29.091 | 220 | 126 | 4 | 95 | 284 | 246 | 465 | 1.91e-20 | 95.9 |
MS.gene038985.t1 | MTR_5g081730 | 48.980 | 98 | 45 | 2 | 179 | 274 | 16 | 110 | 6.44e-19 | 84.3 |
MS.gene038985.t1 | MTR_7g094970 | 25.094 | 267 | 169 | 5 | 95 | 331 | 212 | 477 | 9.91e-18 | 87.4 |
MS.gene038985.t1 | MTR_5g030050 | 26.515 | 264 | 150 | 9 | 95 | 318 | 4 | 263 | 6.41e-15 | 76.3 |
MS.gene038985.t1 | MTR_7g057340 | 23.837 | 172 | 130 | 1 | 403 | 573 | 1 | 172 | 2.42e-12 | 65.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene038985.t1 | AT3G25810 | 42.203 | 590 | 315 | 12 | 8 | 573 | 10 | 597 | 3.89e-157 | 463 |
MS.gene038985.t1 | AT3G25830 | 42.032 | 571 | 314 | 9 | 19 | 573 | 25 | 594 | 1.21e-156 | 462 |
MS.gene038985.t1 | AT3G25820 | 42.032 | 571 | 314 | 9 | 19 | 573 | 25 | 594 | 1.21e-156 | 462 |
MS.gene038985.t1 | AT4G16740 | 41.802 | 555 | 290 | 9 | 38 | 573 | 24 | 564 | 1.27e-155 | 458 |
MS.gene038985.t1 | AT2G24210 | 42.509 | 574 | 304 | 14 | 19 | 573 | 24 | 590 | 7.96e-153 | 451 |
MS.gene038985.t1 | AT4G16730 | 41.495 | 535 | 297 | 6 | 55 | 573 | 5 | 539 | 6.93e-151 | 445 |
MS.gene038985.t1 | AT4G16730 | 41.870 | 492 | 273 | 5 | 95 | 573 | 2 | 493 | 3.11e-143 | 424 |
MS.gene038985.t1 | AT3G25820 | 41.089 | 404 | 227 | 6 | 19 | 412 | 25 | 427 | 4.47e-103 | 318 |
MS.gene038985.t1 | AT4G16740 | 42.667 | 375 | 186 | 6 | 38 | 394 | 24 | 387 | 3.11e-99 | 307 |
MS.gene038985.t1 | AT1G61680 | 29.893 | 562 | 363 | 9 | 2 | 556 | 25 | 562 | 3.77e-87 | 281 |
MS.gene038985.t1 | AT5G23960 | 30.896 | 547 | 367 | 7 | 35 | 573 | 2 | 545 | 4.58e-86 | 278 |
MS.gene038985.t1 | AT1G61680 | 29.715 | 562 | 357 | 10 | 2 | 556 | 25 | 555 | 1.07e-85 | 277 |
MS.gene038985.t1 | AT5G23960 | 30.965 | 549 | 366 | 8 | 35 | 573 | 2 | 547 | 1.27e-84 | 274 |
MS.gene038985.t1 | AT4G16740 | 40.857 | 350 | 178 | 6 | 38 | 369 | 24 | 362 | 3.27e-81 | 259 |
MS.gene038985.t1 | AT4G16740 | 40.857 | 350 | 178 | 6 | 38 | 369 | 24 | 362 | 3.27e-81 | 259 |
MS.gene038985.t1 | AT3G25820 | 40.588 | 340 | 191 | 6 | 19 | 348 | 25 | 363 | 8.42e-79 | 254 |
MS.gene038985.t1 | AT3G25820 | 40.588 | 340 | 191 | 6 | 19 | 348 | 25 | 363 | 8.42e-79 | 254 |
MS.gene038985.t1 | AT3G14520 | 27.706 | 545 | 380 | 8 | 40 | 573 | 63 | 604 | 8.66e-71 | 239 |
MS.gene038985.t1 | AT3G14540 | 27.242 | 591 | 393 | 12 | 3 | 573 | 28 | 601 | 1.83e-67 | 230 |
MS.gene038985.t1 | AT1G70080 | 28.622 | 566 | 387 | 7 | 16 | 566 | 41 | 604 | 3.13e-67 | 229 |
MS.gene038985.t1 | AT1G31950 | 27.037 | 540 | 380 | 8 | 45 | 573 | 70 | 606 | 3.44e-67 | 229 |
MS.gene038985.t1 | AT1G31950 | 26.987 | 541 | 380 | 8 | 45 | 573 | 70 | 607 | 1.15e-66 | 228 |
MS.gene038985.t1 | AT3G29410 | 27.037 | 540 | 388 | 5 | 40 | 573 | 64 | 603 | 4.37e-64 | 221 |
MS.gene038985.t1 | AT3G32030 | 26.387 | 595 | 407 | 10 | 4 | 573 | 16 | 604 | 2.37e-62 | 216 |
MS.gene038985.t1 | AT3G29410 | 27.108 | 498 | 359 | 3 | 80 | 573 | 1 | 498 | 2.45e-61 | 211 |
MS.gene038985.t1 | AT1G33750 | 28.015 | 539 | 368 | 9 | 47 | 573 | 73 | 603 | 7.73e-61 | 212 |
MS.gene038985.t1 | AT3G14490 | 27.483 | 604 | 396 | 13 | 2 | 573 | 8 | 601 | 5.20e-60 | 210 |
MS.gene038985.t1 | AT3G29110 | 28.114 | 562 | 392 | 8 | 16 | 566 | 30 | 590 | 4.58e-57 | 202 |
MS.gene038985.t1 | AT3G14540 | 27.789 | 493 | 321 | 11 | 3 | 477 | 28 | 503 | 4.72e-57 | 200 |
MS.gene038985.t1 | AT3G29190 | 27.947 | 526 | 361 | 7 | 65 | 573 | 77 | 601 | 9.43e-56 | 198 |
MS.gene038985.t1 | AT1G31950 | 27.314 | 443 | 309 | 7 | 45 | 477 | 70 | 509 | 1.58e-55 | 196 |
MS.gene038985.t1 | AT4G15870 | 25.783 | 543 | 381 | 8 | 34 | 566 | 61 | 591 | 5.95e-55 | 196 |
MS.gene038985.t1 | AT4G20210 | 26.917 | 587 | 384 | 14 | 18 | 573 | 28 | 600 | 1.53e-51 | 187 |
MS.gene038985.t1 | AT5G44630 | 27.052 | 536 | 376 | 9 | 48 | 570 | 21 | 554 | 9.71e-51 | 184 |
MS.gene038985.t1 | AT4G20230 | 25.626 | 519 | 366 | 7 | 68 | 568 | 83 | 599 | 1.62e-50 | 184 |
MS.gene038985.t1 | AT4G20230 | 25.626 | 519 | 366 | 7 | 68 | 568 | 95 | 611 | 2.05e-50 | 184 |
MS.gene038985.t1 | AT4G20200 | 25.699 | 572 | 395 | 12 | 16 | 566 | 35 | 597 | 8.95e-48 | 176 |
MS.gene038985.t1 | AT4G13300 | 25.188 | 532 | 389 | 7 | 48 | 570 | 20 | 551 | 1.90e-47 | 174 |
MS.gene038985.t1 | AT1G48800 | 26.630 | 552 | 373 | 12 | 36 | 566 | 59 | 599 | 2.79e-46 | 172 |
MS.gene038985.t1 | AT1G66020 | 25.627 | 558 | 391 | 9 | 25 | 566 | 42 | 591 | 1.08e-45 | 170 |
MS.gene038985.t1 | AT4G13280 | 25.094 | 530 | 388 | 6 | 50 | 570 | 22 | 551 | 4.41e-45 | 168 |
MS.gene038985.t1 | AT2G23230 | 25.046 | 539 | 382 | 9 | 45 | 569 | 61 | 591 | 5.73e-42 | 160 |
MS.gene038985.t1 | AT2G23230 | 25.996 | 527 | 365 | 11 | 45 | 553 | 61 | 580 | 6.61e-42 | 160 |
MS.gene038985.t1 | AT1G48820 | 26.347 | 501 | 327 | 8 | 25 | 521 | 48 | 510 | 1.59e-40 | 155 |
MS.gene038985.t1 | AT1G79460 | 26.499 | 517 | 337 | 13 | 91 | 574 | 274 | 780 | 1.69e-39 | 154 |
MS.gene038985.t1 | AT5G48110 | 28.060 | 335 | 235 | 4 | 237 | 567 | 5 | 337 | 1.76e-37 | 142 |
MS.gene038985.t1 | AT4G13280 | 23.962 | 530 | 364 | 8 | 50 | 570 | 22 | 521 | 3.96e-36 | 142 |
MS.gene038985.t1 | AT1G66020 | 28.969 | 359 | 232 | 8 | 23 | 366 | 40 | 390 | 1.14e-35 | 139 |
MS.gene038985.t1 | AT1G61120 | 26.222 | 450 | 282 | 11 | 85 | 502 | 279 | 710 | 1.31e-30 | 127 |
MS.gene038985.t1 | AT4G02780 | 29.688 | 320 | 181 | 10 | 42 | 326 | 285 | 595 | 1.38e-21 | 99.8 |
Find 88 sgRNAs with CRISPR-Local
Find 178 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTTACTTCAGTTTGCTAAAT+TGG | 0.103435 | 2.1:+31101422 | MS.gene038985:CDS |
AAAGTTTCTCAAAGAATATT+TGG | 0.167285 | 2.1:+31101266 | MS.gene038985:CDS |
TCCTTATTTCATTGTTAAAA+TGG | 0.184881 | 2.1:-31100272 | None:intergenic |
ATATGCTCTTATCTTCATTT+TGG | 0.204420 | 2.1:-31101290 | None:intergenic |
CAATATTCCAGCCTTCAATT+TGG | 0.235469 | 2.1:+31099996 | MS.gene038985:CDS |
GTTTGAAAATGAAATTATAT+TGG | 0.247458 | 2.1:+31101221 | MS.gene038985:CDS |
GATTCCACGTTCATTCAAAA+TGG | 0.264512 | 2.1:+31102832 | MS.gene038985:CDS |
ACATATACTTTAAGTCTTCT+TGG | 0.268413 | 2.1:-31101470 | None:intergenic |
TATTACTTGCTGCTTTCTTT+AGG | 0.292053 | 2.1:-31102591 | None:intergenic |
CTGTAACAAAATGTTTCTTC+TGG | 0.293333 | 2.1:+31099859 | None:intergenic |
GTCATTAAATAGTGAATATA+AGG | 0.299535 | 2.1:+31100036 | MS.gene038985:CDS |
ATGTAGCATTGAATTATCTT+TGG | 0.305826 | 2.1:-31103333 | None:intergenic |
TTGTGTTGGACGAGGGAAAT+TGG | 0.359523 | 2.1:-31099915 | None:intergenic |
TAACTATGGATAAGTATATC+TGG | 0.362564 | 2.1:-31102803 | None:intergenic |
CAATTACCTATCAATTGCTT+TGG | 0.379210 | 2.1:-31102325 | None:intergenic |
CAATGAAATAAGGAACATAT+TGG | 0.384621 | 2.1:+31100281 | MS.gene038985:CDS |
TTACATACTGCTAGAGATAA+AGG | 0.386402 | 2.1:-31099890 | None:intergenic |
CTATCAAGTTTAGACTCTTA+AGG | 0.401894 | 2.1:+31100358 | MS.gene038985:CDS |
CTTGCTGCTTTCTTTAGGTA+TGG | 0.403964 | 2.1:-31102586 | None:intergenic |
ACTTCAAATAAGTCATGCTT+TGG | 0.406823 | 2.1:+31101314 | MS.gene038985:CDS |
AAGAAAACTCAAACATGATT+AGG | 0.407501 | 2.1:+31102873 | MS.gene038985:CDS |
TACTCAACACAACATTGAAT+AGG | 0.408865 | 2.1:-31103591 | None:intergenic |
GTGGAATCAGAAAGTAACTA+TGG | 0.412857 | 2.1:-31102817 | None:intergenic |
ATATTCTTTGAGAAACTTTG+AGG | 0.413496 | 2.1:-31101262 | None:intergenic |
TGCTTTGAACATTGGTAGAA+TGG | 0.422510 | 2.1:+31103479 | MS.gene038985:CDS |
TCTTCACCAAAGCAATTGAT+AGG | 0.429846 | 2.1:+31102319 | MS.gene038985:CDS |
AAGTATATCTGGTGCACCTA+TGG | 0.431316 | 2.1:-31102792 | None:intergenic |
TATATTCACTATTTAATGAC+TGG | 0.436530 | 2.1:-31100033 | None:intergenic |
ATCGTCAATTGTGGTAATCA+AGG | 0.462084 | 2.1:-31102259 | None:intergenic |
ATTGATATATTGCAAAGGCT+TGG | 0.463593 | 2.1:+31100240 | MS.gene038985:CDS |
TTACGCCTTGCTAATGACCT+TGG | 0.465962 | 2.1:+31102911 | MS.gene038985:CDS |
ATTACGCATTTCATCTTGAA+AGG | 0.471353 | 2.1:-31101133 | None:intergenic |
CTTTGGAGCTTCCACTACAT+TGG | 0.473873 | 2.1:+31101331 | MS.gene038985:CDS |
TTTCTCGATGGGAGGCTCAA+TGG | 0.484973 | 2.1:+31101358 | MS.gene038985:CDS |
TAATCATCGGTCCAAATTGA+AGG | 0.485937 | 2.1:-31100007 | None:intergenic |
TCTATGTATTCTTCAAGACT+TGG | 0.487482 | 2.1:-31102755 | None:intergenic |
ATAGATACTGCTTTGAACAT+TGG | 0.501453 | 2.1:+31103471 | MS.gene038985:CDS |
TTCATTCAAAATGGAAGACT+TGG | 0.509358 | 2.1:+31102841 | MS.gene038985:CDS |
TAGACAAATGCAAAGTGCTA+AGG | 0.513093 | 2.1:+31100160 | MS.gene038985:CDS |
TATGAAGTTTCAAATGATCA+TGG | 0.513306 | 2.1:+31099950 | MS.gene038985:CDS |
GCCTTGCATTGTGTTGGACG+AGG | 0.519822 | 2.1:-31099923 | None:intergenic |
TATGTTGCCTTGCATTGTGT+TGG | 0.521605 | 2.1:-31099929 | None:intergenic |
AACACAACATTGAATAGGAA+AGG | 0.527983 | 2.1:-31103586 | None:intergenic |
GGCCAATCTGTTGATGTTGA+GGG | 0.533101 | 2.1:+31101165 | MS.gene038985:CDS |
TTCCCTCAACATCAACAGAT+TGG | 0.534301 | 2.1:-31101167 | None:intergenic |
AAGTGCTAAGGGAAGAAGTA+AGG | 0.535775 | 2.1:+31100172 | MS.gene038985:CDS |
AGGCCAATCTGTTGATGTTG+AGG | 0.541057 | 2.1:+31101164 | MS.gene038985:CDS |
AAGAATACATAGAGAATGCA+TGG | 0.541704 | 2.1:+31102765 | MS.gene038985:CDS |
CATCGGTCCAAATTGAAGGC+TGG | 0.542304 | 2.1:-31100003 | None:intergenic |
TTTCAGCGTGAAAATGAGAT+GGG | 0.542662 | 2.1:+31103303 | MS.gene038985:intron |
ACACAACATTGAATAGGAAA+GGG | 0.549956 | 2.1:-31103585 | None:intergenic |
AGACTTGAAATTTGTTCCCA+CGG | 0.551562 | 2.1:-31102196 | None:intergenic |
CCCTCGTCCAACACAATGCA+AGG | 0.553388 | 2.1:+31099922 | MS.gene038985:CDS |
CGAGAAATTCTCCAATGTAG+TGG | 0.558830 | 2.1:-31101342 | None:intergenic |
CATGGTTACGATATATCGAC+AGG | 0.559669 | 2.1:+31100384 | MS.gene038985:CDS |
TTATGATGTGCATGGTACCT+TGG | 0.560316 | 2.1:+31102284 | MS.gene038985:CDS |
ATCATAAATATCGTCAATTG+TGG | 0.568920 | 2.1:-31102268 | None:intergenic |
AGACAAATGCAAAGTGCTAA+GGG | 0.569162 | 2.1:+31100161 | MS.gene038985:CDS |
TACATTGGAGAATTTCTCGA+TGG | 0.572320 | 2.1:+31101346 | MS.gene038985:CDS |
CTTCCATGTTGTACACAACA+AGG | 0.573406 | 2.1:-31103403 | None:intergenic |
TAGATGGGATCTAAATGCCA+TGG | 0.574694 | 2.1:+31102462 | MS.gene038985:intron |
GCATTGTTCATGTACCTACA+TGG | 0.575275 | 2.1:+31103501 | MS.gene038985:CDS |
GTATTGTGGGAGAGGTTCCA+TGG | 0.575761 | 2.1:-31102479 | None:intergenic |
TTTAGACTCTTAAGGCAGCA+TGG | 0.576831 | 2.1:+31100366 | MS.gene038985:CDS |
GGTAATCAAGGCATATACCT+TGG | 0.581141 | 2.1:-31102247 | None:intergenic |
TAATGACTGGATATAATCAT+CGG | 0.582632 | 2.1:-31100020 | None:intergenic |
GAGAATGCATGGATATCCAT+AGG | 0.583758 | 2.1:+31102776 | MS.gene038985:CDS |
AACTTACTTTATAAGATCCA+AGG | 0.584705 | 2.1:-31102928 | None:intergenic |
AATTTATTGATATATTGCAA+AGG | 0.592540 | 2.1:+31100235 | MS.gene038985:CDS |
TCGTGGAGCTTCTGAAGTCG+AGG | 0.598317 | 2.1:+31103362 | MS.gene038985:CDS |
GAAGAGCTCTAGTTCTTCCA+AGG | 0.600642 | 2.1:-31102301 | None:intergenic |
GAGTCTAAACTTGATAGCTG+TGG | 0.603171 | 2.1:-31100352 | None:intergenic |
CAATGCTACATGAACGATCG+TGG | 0.605163 | 2.1:+31103345 | MS.gene038985:CDS |
AAGATCCAAGGTCATTAGCA+AGG | 0.609710 | 2.1:-31102916 | None:intergenic |
CCTTGCATTGTGTTGGACGA+GGG | 0.610949 | 2.1:-31099922 | None:intergenic |
TGGTGGAAAAGAATCGAACT+TGG | 0.611617 | 2.1:+31102123 | MS.gene038985:CDS |
GAAGCAAGGTGGTATCATAG+TGG | 0.612090 | 2.1:+31102725 | MS.gene038985:CDS |
TTCATGTACCTACATGGAGA+TGG | 0.612512 | 2.1:+31103507 | MS.gene038985:CDS |
TTGGAGAATTTCTCGATGGG+AGG | 0.615953 | 2.1:+31101350 | MS.gene038985:CDS |
AAGACTTAAAGTATATGTCA+AGG | 0.616611 | 2.1:+31101475 | MS.gene038985:CDS |
TATATTGCAAAGGCTTGGAG+TGG | 0.619246 | 2.1:+31100245 | MS.gene038985:CDS |
ACATTGGAGAATTTCTCGAT+GGG | 0.625313 | 2.1:+31101347 | MS.gene038985:CDS |
ATGCATATTTGATAGAAGCA+AGG | 0.628575 | 2.1:+31102711 | MS.gene038985:CDS |
GACGATATTTATGATGTGCA+TGG | 0.635855 | 2.1:+31102276 | MS.gene038985:CDS |
TGCTATGACCATCTCCATGT+AGG | 0.637310 | 2.1:-31103515 | None:intergenic |
AGTCCTTGTTGTGTACAACA+TGG | 0.651967 | 2.1:+31103400 | MS.gene038985:CDS |
CATATTTGATAGAAGCAAGG+TGG | 0.695260 | 2.1:+31102714 | MS.gene038985:CDS |
TTACCGAAAAGATATAACCA+AGG | 0.713401 | 2.1:+31102230 | MS.gene038985:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | ATTAAATATTTTTTATATTT+AGG | + | chr2.1:31100436-31100455 | MS.gene038985:intron | 0.0% |
!! | TAATTGAATTAACTTAAATT+TGG | + | chr2.1:31101637-31101656 | MS.gene038985:intron | 10.0% |
!! | TTATCATTTAAAAAAGATAA+TGG | - | chr2.1:31100916-31100935 | None:intergenic | 10.0% |
!!! | ATTATCTTTTTTAAATGATA+AGG | + | chr2.1:31100915-31100934 | MS.gene038985:intron | 10.0% |
!! | AAATGATAAGGAAAAAAAAT+TGG | + | chr2.1:31100927-31100946 | MS.gene038985:intron | 15.0% |
!! | AATTTATTGATATATTGCAA+AGG | + | chr2.1:31100235-31100254 | MS.gene038985:CDS | 15.0% |
!! | CATTAATATTTCTTAAGTTA+AGG | - | chr2.1:31100484-31100503 | None:intergenic | 15.0% |
!! | GTTTGAAAATGAAATTATAT+TGG | + | chr2.1:31101221-31101240 | MS.gene038985:CDS | 15.0% |
!! | TCAATTATAAATTCAATCAA+TGG | + | chr2.1:31101984-31102003 | MS.gene038985:intron | 15.0% |
!!! | ACATTTAAAATTGTGAATTT+TGG | + | chr2.1:31101613-31101632 | MS.gene038985:intron | 15.0% |
!!! | ATTACTTTTAAATGAGAATA+AGG | - | chr2.1:31102402-31102421 | None:intergenic | 15.0% |
!!! | GCACATATTTTTTTTTTAAA+AGG | - | chr2.1:31101020-31101039 | None:intergenic | 15.0% |
!!! | TACACTTTTTTTAATCATAA+AGG | + | chr2.1:31100776-31100795 | MS.gene038985:intron | 15.0% |
!!! | TCTATTTATTATGAGTTTTT+AGG | + | chr2.1:31102637-31102656 | MS.gene038985:intron | 15.0% |
!!! | TTACTTTTAAATGAGAATAA+GGG | - | chr2.1:31102401-31102420 | None:intergenic | 15.0% |
!! | AAAAAATATGTGCTATAGTA+TGG | + | chr2.1:31101077-31101096 | MS.gene038985:intron | 20.0% |
!! | AAAGTTTCTCAAAGAATATT+TGG | + | chr2.1:31101266-31101285 | MS.gene038985:CDS | 20.0% |
!! | AAATCAGGATATATAGTATA+TGG | - | chr2.1:31101821-31101840 | None:intergenic | 20.0% |
!! | AACAATTAGTGATAAGTTAA+AGG | - | chr2.1:31103270-31103289 | None:intergenic | 20.0% |
!! | AACGAAATTATTTATCAACT+CGG | + | chr2.1:31100664-31100683 | MS.gene038985:intron | 20.0% |
!! | AACGTTTAAAAAAATAACGA+AGG | - | chr2.1:31102989-31103008 | None:intergenic | 20.0% |
!! | AGATCATTTATTGTAAAATC+AGG | - | chr2.1:31101836-31101855 | None:intergenic | 20.0% |
!! | ATGTATCATAACAATAATGA+AGG | - | chr2.1:31103013-31103032 | None:intergenic | 20.0% |
!! | CTAGTTAAATAAATTAATGC+AGG | + | chr2.1:31100125-31100144 | MS.gene038985:intron | 20.0% |
!! | GTCATTAAATAGTGAATATA+AGG | + | chr2.1:31100036-31100055 | MS.gene038985:CDS | 20.0% |
!! | TATATTCACTATTTAATGAC+TGG | - | chr2.1:31100036-31100055 | None:intergenic | 20.0% |
!! | TTAAATTGTATGTATGAAGA+AGG | - | chr2.1:31103247-31103266 | None:intergenic | 20.0% |
!! | TTTGTAAGTAAATAGATGTA+CGG | - | chr2.1:31100627-31100646 | None:intergenic | 20.0% |
!!! | ACCATTTTAACAATGAAATA+AGG | + | chr2.1:31100271-31100290 | MS.gene038985:CDS | 20.0% |
!!! | ATGTAAATTTTTTATCGACT+TGG | - | chr2.1:31100331-31100350 | None:intergenic | 20.0% |
!!! | ATTGTATCAATTTTTTTACG+CGG | - | chr2.1:31103176-31103195 | None:intergenic | 20.0% |
!!! | GAATTGTTGAAAATTTTGTT+TGG | + | chr2.1:31102172-31102191 | MS.gene038985:CDS | 20.0% |
!!! | GATTTTATGTGTTTTTATAG+TGG | + | chr2.1:31102675-31102694 | MS.gene038985:intron | 20.0% |
!!! | TCCTTATTTCATTGTTAAAA+TGG | - | chr2.1:31100275-31100294 | None:intergenic | 20.0% |
!!! | TTTTCTCTCAAATTTTTTTG+TGG | - | chr2.1:31103041-31103060 | None:intergenic | 20.0% |
!!! | TTTTTTTGTTCTTTTTAAGC+TGG | + | chr2.1:31102103-31102122 | MS.gene038985:intron | 20.0% |
! | AACTTACTTTATAAGATCCA+AGG | - | chr2.1:31102931-31102950 | None:intergenic | 25.0% |
! | AAGAAAACTCAAACATGATT+AGG | + | chr2.1:31102873-31102892 | MS.gene038985:CDS | 25.0% |
! | AAGACTTAAAGTATATGTCA+AGG | + | chr2.1:31101475-31101494 | MS.gene038985:CDS | 25.0% |
! | ACATATACTTTAAGTCTTCT+TGG | - | chr2.1:31101473-31101492 | None:intergenic | 25.0% |
! | ATCATAAATATCGTCAATTG+TGG | - | chr2.1:31102271-31102290 | None:intergenic | 25.0% |
! | ATGAAGAATATTTGCAAATG+AGG | + | chr2.1:31103086-31103105 | MS.gene038985:intron | 25.0% |
! | CAATGAAATAAGGAACATAT+TGG | + | chr2.1:31100281-31100300 | MS.gene038985:CDS | 25.0% |
! | CTATTTACATTGAAAGTTGA+GGG | + | chr2.1:31101039-31101058 | MS.gene038985:intron | 25.0% |
! | GTTAATCACATGTAAAATTG+TGG | + | chr2.1:31101557-31101576 | MS.gene038985:intron | 25.0% |
! | TAACTATGGATAAGTATATC+TGG | - | chr2.1:31102806-31102825 | None:intergenic | 25.0% |
! | TAATGACTGGATATAATCAT+CGG | - | chr2.1:31100023-31100042 | None:intergenic | 25.0% |
! | TATGAAGTTTCAAATGATCA+TGG | + | chr2.1:31099950-31099969 | MS.gene038985:CDS | 25.0% |
! | TATGATCAAGAACTATGATT+TGG | + | chr2.1:31100407-31100426 | MS.gene038985:intron | 25.0% |
! | TCATAAAGGAAAAAAAAAGC+TGG | + | chr2.1:31100790-31100809 | MS.gene038985:intron | 25.0% |
! | TTGAAACCTTGAAAAAAAGT+GGG | + | chr2.1:31102551-31102570 | MS.gene038985:CDS | 25.0% |
! | TTTGTAAGGAATAATTATGC+TGG | - | chr2.1:31102955-31102974 | None:intergenic | 25.0% |
!! | AAGCATATTTTCATGTATTG+TGG | - | chr2.1:31102496-31102515 | None:intergenic | 25.0% |
!! | AGCATATTTTCATGTATTGT+GGG | - | chr2.1:31102495-31102514 | None:intergenic | 25.0% |
!! | AGGAAGAGATTAATTTTGTA+AGG | - | chr2.1:31102969-31102988 | None:intergenic | 25.0% |
!! | ATACCTTGGTTATATCTTTT+CGG | - | chr2.1:31102236-31102255 | None:intergenic | 25.0% |
!! | ATATGCTCTTATCTTCATTT+TGG | - | chr2.1:31101293-31101312 | None:intergenic | 25.0% |
!! | ATATTCTTTGAGAAACTTTG+AGG | - | chr2.1:31101265-31101284 | None:intergenic | 25.0% |
!! | ATGTAGCATTGAATTATCTT+TGG | - | chr2.1:31103336-31103355 | None:intergenic | 25.0% |
!! | ATTATGCGATTTTGAATTTC+AGG | - | chr2.1:31103549-31103568 | None:intergenic | 25.0% |
!! | TTATGCGATTTTGAATTTCA+GGG | - | chr2.1:31103548-31103567 | None:intergenic | 25.0% |
!! | TTTGAAACCTTGAAAAAAAG+TGG | + | chr2.1:31102550-31102569 | MS.gene038985:CDS | 25.0% |
!!! | GAAATGCGTAATTTTAAGAA+AGG | + | chr2.1:31101144-31101163 | MS.gene038985:CDS | 25.0% |
!!! | TTCATAGAATTTTAACTGCA+TGG | - | chr2.1:31100090-31100109 | None:intergenic | 25.0% |
!!! | TTTACTTCAGTTTGCTAAAT+TGG | + | chr2.1:31101422-31101441 | MS.gene038985:CDS | 25.0% |
AACACAACATTGAATAGGAA+AGG | - | chr2.1:31103589-31103608 | None:intergenic | 30.0% | |
AAGAATACATAGAGAATGCA+TGG | + | chr2.1:31102765-31102784 | MS.gene038985:CDS | 30.0% | |
ACACAACATTGAATAGGAAA+GGG | - | chr2.1:31103588-31103607 | None:intergenic | 30.0% | |
ACTTCAAATAAGTCATGCTT+TGG | + | chr2.1:31101314-31101333 | MS.gene038985:CDS | 30.0% | |
ATGCATATTTGATAGAAGCA+AGG | + | chr2.1:31102711-31102730 | MS.gene038985:CDS | 30.0% | |
ATTACGCATTTCATCTTGAA+AGG | - | chr2.1:31101136-31101155 | None:intergenic | 30.0% | |
ATTGATACAATGAGAATTGC+TGG | + | chr2.1:31103185-31103204 | MS.gene038985:intron | 30.0% | |
ATTGATATATTGCAAAGGCT+TGG | + | chr2.1:31100240-31100259 | MS.gene038985:CDS | 30.0% | |
CAATTACCTATCAATTGCTT+TGG | - | chr2.1:31102328-31102347 | None:intergenic | 30.0% | |
CTATCAAGTTTAGACTCTTA+AGG | + | chr2.1:31100358-31100377 | MS.gene038985:CDS | 30.0% | |
GCTATTTACATTGAAAGTTG+AGG | + | chr2.1:31101038-31101057 | MS.gene038985:intron | 30.0% | |
GGTTAATTCATTTGACAAGA+TGG | + | chr2.1:31101578-31101597 | MS.gene038985:intron | 30.0% | |
TACTCAACACAACATTGAAT+AGG | - | chr2.1:31103594-31103613 | None:intergenic | 30.0% | |
TCTATGTATTCTTCAAGACT+TGG | - | chr2.1:31102758-31102777 | None:intergenic | 30.0% | |
TTACATACTGCTAGAGATAA+AGG | - | chr2.1:31099893-31099912 | None:intergenic | 30.0% | |
TTACCGAAAAGATATAACCA+AGG | + | chr2.1:31102230-31102249 | MS.gene038985:CDS | 30.0% | |
TTCACGCTGAAAAAAGAAAA+AGG | - | chr2.1:31103295-31103314 | None:intergenic | 30.0% | |
TTCATTCAAAATGGAAGACT+TGG | + | chr2.1:31102841-31102860 | MS.gene038985:CDS | 30.0% | |
! | AAGTTGAGGGTAATTTTAGA+TGG | + | chr2.1:31101052-31101071 | MS.gene038985:intron | 30.0% |
! | ATAGATACTGCTTTGAACAT+TGG | + | chr2.1:31103471-31103490 | MS.gene038985:CDS | 30.0% |
! | ATTTTCAACAATTCTATCCC+TGG | - | chr2.1:31102166-31102185 | None:intergenic | 30.0% |
! | GTTACACGATATATTTTTCG+TGG | + | chr2.1:31100834-31100853 | MS.gene038985:intron | 30.0% |
! | TCTAGAACATTGCAATGATA+TGG | - | chr2.1:31101946-31101965 | None:intergenic | 30.0% |
! | TGAAAAGTTGAGATTTTCCA+GGG | + | chr2.1:31102146-31102165 | MS.gene038985:CDS | 30.0% |
! | TTTATCAACTCGGCATATTT+TGG | + | chr2.1:31100674-31100693 | MS.gene038985:intron | 30.0% |
! | TTTTCTTTTGTTCATCGTCT+TGG | + | chr2.1:31101908-31101927 | MS.gene038985:intron | 30.0% |
! | TTTTTATATTTAGGCAACCG+TGG | + | chr2.1:31100445-31100464 | MS.gene038985:intron | 30.0% |
!! | ATTTGACTTGTGAATCTAGA+TGG | + | chr2.1:31102446-31102465 | MS.gene038985:intron | 30.0% |
!! | TATTACTTGCTGCTTTCTTT+AGG | - | chr2.1:31102594-31102613 | None:intergenic | 30.0% |
!! | TTTGACTTGTGAATCTAGAT+GGG | + | chr2.1:31102447-31102466 | MS.gene038985:intron | 30.0% |
!! | TTTTGTTCTTTTTAAGCTGG+TGG | + | chr2.1:31102106-31102125 | MS.gene038985:intron | 30.0% |
AAAGCAGTCATTACGTTTCA+TGG | + | chr2.1:31101502-31101521 | MS.gene038985:intron | 35.0% | |
AATATACACAGATGTTAGCG+CGG | - | chr2.1:31100547-31100566 | None:intergenic | 35.0% | |
ACATTGGAGAATTTCTCGAT+GGG | + | chr2.1:31101347-31101366 | MS.gene038985:CDS | 35.0% | |
ACTACGTGAGCACATATTAT+CGG | - | chr2.1:31101773-31101792 | None:intergenic | 35.0% | |
ATCGTCAATTGTGGTAATCA+AGG | - | chr2.1:31102262-31102281 | None:intergenic | 35.0% | |
CAATATTCCAGCCTTCAATT+TGG | + | chr2.1:31099996-31100015 | MS.gene038985:CDS | 35.0% | |
CATATTTGATAGAAGCAAGG+TGG | + | chr2.1:31102714-31102733 | MS.gene038985:CDS | 35.0% | |
CATCGTAGGTGTAGAAAAAT+AGG | + | chr2.1:31101728-31101747 | MS.gene038985:intron | 35.0% | |
GACGATATTTATGATGTGCA+TGG | + | chr2.1:31102276-31102295 | MS.gene038985:CDS | 35.0% | |
GATTCCACGTTCATTCAAAA+TGG | + | chr2.1:31102832-31102851 | MS.gene038985:CDS | 35.0% | |
GTGGAATCAGAAAGTAACTA+TGG | - | chr2.1:31102820-31102839 | None:intergenic | 35.0% | |
GTTCACAATACTTCCATCTT+GGG | + | chr2.1:31103135-31103154 | MS.gene038985:intron | 35.0% | |
TAATCATCGGTCCAAATTGA+AGG | - | chr2.1:31100010-31100029 | None:intergenic | 35.0% | |
TACATTGGAGAATTTCTCGA+TGG | + | chr2.1:31101346-31101365 | MS.gene038985:CDS | 35.0% | |
TCTTCACCAAAGCAATTGAT+AGG | + | chr2.1:31102319-31102338 | MS.gene038985:CDS | 35.0% | |
TGAGCACATATTATCGGTAA+CGG | - | chr2.1:31101767-31101786 | None:intergenic | 35.0% | |
TGTTCACAATACTTCCATCT+TGG | + | chr2.1:31103134-31103153 | MS.gene038985:intron | 35.0% | |
TTTCAGCGTGAAAATGAGAT+GGG | + | chr2.1:31103303-31103322 | MS.gene038985:intron | 35.0% | |
! | AAGGTTTTCAATCTCAACCA+CGG | - | chr2.1:31100465-31100484 | None:intergenic | 35.0% |
! | AGACAAATGCAAAGTGCTAA+GGG | + | chr2.1:31100161-31100180 | MS.gene038985:CDS | 35.0% |
! | AGACTTGAAATTTGTTCCCA+CGG | - | chr2.1:31102199-31102218 | None:intergenic | 35.0% |
! | ATTTTCATGTATTGTGGGAG+AGG | - | chr2.1:31102490-31102509 | None:intergenic | 35.0% |
! | ATTTTTCTACACCTACGATG+TGG | - | chr2.1:31101728-31101747 | None:intergenic | 35.0% |
! | GTGAAAAGTTGAGATTTTCC+AGG | + | chr2.1:31102145-31102164 | MS.gene038985:CDS | 35.0% |
! | TAGACAAATGCAAAGTGCTA+AGG | + | chr2.1:31100160-31100179 | MS.gene038985:CDS | 35.0% |
! | TCTTCCATTTTGAATGAACG+TGG | - | chr2.1:31102839-31102858 | None:intergenic | 35.0% |
! | TGCTTTGAACATTGGTAGAA+TGG | + | chr2.1:31103479-31103498 | MS.gene038985:CDS | 35.0% |
! | TTAATTTGAGACCACATCGT+AGG | + | chr2.1:31101714-31101733 | MS.gene038985:intron | 35.0% |
! | TTTTCAGCGTGAAAATGAGA+TGG | + | chr2.1:31103302-31103321 | MS.gene038985:intron | 35.0% |
!! | GAAAATTTTGTTTGGACCGT+GGG | + | chr2.1:31102180-31102199 | MS.gene038985:CDS | 35.0% |
!! | TGAAAATTTTGTTTGGACCG+TGG | + | chr2.1:31102179-31102198 | MS.gene038985:CDS | 35.0% |
!!! | ATAGTGCCCACTTTTTTTCA+AGG | - | chr2.1:31102560-31102579 | None:intergenic | 35.0% |
AAGATCCAAGGTCATTAGCA+AGG | - | chr2.1:31102919-31102938 | None:intergenic | 40.0% | |
AAGTATATCTGGTGCACCTA+TGG | - | chr2.1:31102795-31102814 | None:intergenic | 40.0% | |
AAGTGCTAAGGGAAGAAGTA+AGG | + | chr2.1:31100172-31100191 | MS.gene038985:CDS | 40.0% | |
CATGGTTACGATATATCGAC+AGG | + | chr2.1:31100384-31100403 | MS.gene038985:CDS | 40.0% | |
CGAGAAATTCTCCAATGTAG+TGG | - | chr2.1:31101345-31101364 | None:intergenic | 40.0% | |
CTTCCATGTTGTACACAACA+AGG | - | chr2.1:31103406-31103425 | None:intergenic | 40.0% | |
CTTGATTTCGTTGTCTAGTG+TGG | + | chr2.1:31101885-31101904 | MS.gene038985:intron | 40.0% | |
GAACACGATCATGACATGAA+AGG | - | chr2.1:31103119-31103138 | None:intergenic | 40.0% | |
GAGAATGCATGGATATCCAT+AGG | + | chr2.1:31102776-31102795 | MS.gene038985:CDS | 40.0% | |
GATAATATGTGCTCACGTAG+TGG | + | chr2.1:31101772-31101791 | MS.gene038985:intron | 40.0% | |
GCATTGTTCATGTACCTACA+TGG | + | chr2.1:31103501-31103520 | MS.gene038985:CDS | 40.0% | |
GGTAATCAAGGCATATACCT+TGG | - | chr2.1:31102250-31102269 | None:intergenic | 40.0% | |
TAGATGGGATCTAAATGCCA+TGG | + | chr2.1:31102462-31102481 | MS.gene038985:intron | 40.0% | |
TATATTGCAAAGGCTTGGAG+TGG | + | chr2.1:31100245-31100264 | MS.gene038985:CDS | 40.0% | |
TATGTTGCCTTGCATTGTGT+TGG | - | chr2.1:31099932-31099951 | None:intergenic | 40.0% | |
TGAGAATTGCTGGAGTACAT+CGG | + | chr2.1:31103195-31103214 | MS.gene038985:intron | 40.0% | |
TGGTGGAAAAGAATCGAACT+TGG | + | chr2.1:31102123-31102142 | MS.gene038985:CDS | 40.0% | |
TGTTCATCGTCTTGGTATGT+CGG | + | chr2.1:31101916-31101935 | MS.gene038985:intron | 40.0% | |
TTATGATGTGCATGGTACCT+TGG | + | chr2.1:31102284-31102303 | MS.gene038985:CDS | 40.0% | |
TTCATGTACCTACATGGAGA+TGG | + | chr2.1:31103507-31103526 | MS.gene038985:CDS | 40.0% | |
TTCCATCTTGGGACGAATAA+TGG | + | chr2.1:31103146-31103165 | MS.gene038985:intron | 40.0% | |
TTCCATTATTCGTCCCAAGA+TGG | - | chr2.1:31103151-31103170 | None:intergenic | 40.0% | |
TTCCCTCAACATCAACAGAT+TGG | - | chr2.1:31101170-31101189 | None:intergenic | 40.0% | |
TTTAGACTCTTAAGGCAGCA+TGG | + | chr2.1:31100366-31100385 | MS.gene038985:CDS | 40.0% | |
! | AGTCCTTGTTGTGTACAACA+TGG | + | chr2.1:31103400-31103419 | MS.gene038985:CDS | 40.0% |
! | GAGTCTAAACTTGATAGCTG+TGG | - | chr2.1:31100355-31100374 | None:intergenic | 40.0% |
!! | CTTGCTGCTTTCTTTAGGTA+TGG | - | chr2.1:31102589-31102608 | None:intergenic | 40.0% |
AGGCCAATCTGTTGATGTTG+AGG | + | chr2.1:31101164-31101183 | MS.gene038985:CDS | 45.0% | |
CAATGCTACATGAACGATCG+TGG | + | chr2.1:31103345-31103364 | MS.gene038985:CDS | 45.0% | |
GAAGCAAGGTGGTATCATAG+TGG | + | chr2.1:31102725-31102744 | MS.gene038985:CDS | 45.0% | |
GGCCAATCTGTTGATGTTGA+GGG | + | chr2.1:31101165-31101184 | MS.gene038985:CDS | 45.0% | |
TGCTATGACCATCTCCATGT+AGG | - | chr2.1:31103518-31103537 | None:intergenic | 45.0% | |
TGTGATTAACCGACTGTCGT+AGG | - | chr2.1:31101547-31101566 | None:intergenic | 45.0% | |
TTACGCCTTGCTAATGACCT+TGG | + | chr2.1:31102911-31102930 | MS.gene038985:CDS | 45.0% | |
TTGGAGAATTTCTCGATGGG+AGG | + | chr2.1:31101350-31101369 | MS.gene038985:CDS | 45.0% | |
TTGTGTTGGACGAGGGAAAT+TGG | - | chr2.1:31099918-31099937 | None:intergenic | 45.0% | |
!! | CTTTGGAGCTTCCACTACAT+TGG | + | chr2.1:31101331-31101350 | MS.gene038985:CDS | 45.0% |
!! | GAAGAGCTCTAGTTCTTCCA+AGG | - | chr2.1:31102304-31102323 | None:intergenic | 45.0% |
AACCGACTGTCGTAGGTGTA+GGG | - | chr2.1:31101540-31101559 | None:intergenic | 50.0% | |
CATCGGTCCAAATTGAAGGC+TGG | - | chr2.1:31100006-31100025 | None:intergenic | 50.0% | |
CCTTGCATTGTGTTGGACGA+GGG | - | chr2.1:31099925-31099944 | None:intergenic | 50.0% | |
GTATTGTGGGAGAGGTTCCA+TGG | - | chr2.1:31102482-31102501 | None:intergenic | 50.0% | |
GTCGTAGGTGTAGGGGAAAT+TGG | - | chr2.1:31101532-31101551 | None:intergenic | 50.0% | |
TAACCGACTGTCGTAGGTGT+AGG | - | chr2.1:31101541-31101560 | None:intergenic | 50.0% | |
TTTCTCGATGGGAGGCTCAA+TGG | + | chr2.1:31101358-31101377 | MS.gene038985:CDS | 50.0% | |
ACCGACTGTCGTAGGTGTAG+GGG | - | chr2.1:31101539-31101558 | None:intergenic | 55.0% | |
CCCTCGTCCAACACAATGCA+AGG | + | chr2.1:31099922-31099941 | MS.gene038985:CDS | 55.0% | |
GCCTTGCATTGTGTTGGACG+AGG | - | chr2.1:31099926-31099945 | None:intergenic | 55.0% | |
TCCCCTACACCTACGACAGT+CGG | + | chr2.1:31101535-31101554 | MS.gene038985:intron | 55.0% | |
!! | TCGTGGAGCTTCTGAAGTCG+AGG | + | chr2.1:31103362-31103381 | MS.gene038985:CDS | 55.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.1 | gene | 31099869 | 31103614 | 31099869 | ID=MS.gene038985 |
chr2.1 | mRNA | 31099869 | 31103614 | 31099869 | ID=MS.gene038985.t1;Parent=MS.gene038985 |
chr2.1 | exon | 31099869 | 31100057 | 31099869 | ID=MS.gene038985.t1.exon1;Parent=MS.gene038985.t1 |
chr2.1 | CDS | 31099869 | 31100057 | 31099869 | ID=cds.MS.gene038985.t1;Parent=MS.gene038985.t1 |
chr2.1 | exon | 31100147 | 31100405 | 31100147 | ID=MS.gene038985.t1.exon2;Parent=MS.gene038985.t1 |
chr2.1 | CDS | 31100147 | 31100405 | 31100147 | ID=cds.MS.gene038985.t1;Parent=MS.gene038985.t1 |
chr2.1 | exon | 31101121 | 31101496 | 31101121 | ID=MS.gene038985.t1.exon3;Parent=MS.gene038985.t1 |
chr2.1 | CDS | 31101121 | 31101496 | 31101121 | ID=cds.MS.gene038985.t1;Parent=MS.gene038985.t1 |
chr2.1 | exon | 31102122 | 31102340 | 31102122 | ID=MS.gene038985.t1.exon4;Parent=MS.gene038985.t1 |
chr2.1 | CDS | 31102122 | 31102340 | 31102122 | ID=cds.MS.gene038985.t1;Parent=MS.gene038985.t1 |
chr2.1 | exon | 31102465 | 31102603 | 31102465 | ID=MS.gene038985.t1.exon5;Parent=MS.gene038985.t1 |
chr2.1 | CDS | 31102465 | 31102603 | 31102465 | ID=cds.MS.gene038985.t1;Parent=MS.gene038985.t1 |
chr2.1 | exon | 31102695 | 31102943 | 31102695 | ID=MS.gene038985.t1.exon6;Parent=MS.gene038985.t1 |
chr2.1 | CDS | 31102695 | 31102943 | 31102695 | ID=cds.MS.gene038985.t1;Parent=MS.gene038985.t1 |
chr2.1 | exon | 31103309 | 31103614 | 31103309 | ID=MS.gene038985.t1.exon7;Parent=MS.gene038985.t1 |
chr2.1 | CDS | 31103309 | 31103614 | 31103309 | ID=cds.MS.gene038985.t1;Parent=MS.gene038985.t1 |
Gene Sequence |
Protein sequence |