AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene044964


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene044964.t1 MTR_7g024390 99.074 648 6 0 1 648 1 648 0.0 1323
MS.gene044964.t1 MTR_7g099680 93.837 649 39 1 1 648 1 649 0.0 1259
MS.gene044964.t1 MTR_7g024580 92.791 652 40 3 1 648 1 649 0.0 1242
MS.gene044964.t1 MTR_4g063710 92.000 650 49 2 1 648 1 649 0.0 1223
MS.gene044964.t1 MTR_4g063720 91.859 651 48 2 1 648 1 649 0.0 1221
MS.gene044964.t1 MTR_4g130540 86.544 654 81 2 1 648 1 653 0.0 1149
MS.gene044964.t1 MTR_6g033850 67.480 615 199 1 1 615 1 614 0.0 853
MS.gene044964.t1 MTR_6g033760 67.045 616 202 1 1 616 1 615 0.0 842
MS.gene044964.t1 MTR_7g025760 66.023 621 207 3 1 619 1 619 0.0 839
MS.gene044964.t1 MTR_7g026030 65.862 621 207 4 1 619 1 618 0.0 833
MS.gene044964.t1 MTR_2g017730 67.107 605 179 3 9 607 8 598 0.0 827
MS.gene044964.t1 MTR_7g021440 65.528 615 208 3 1 613 1 613 0.0 824
MS.gene044964.t1 MTR_2g038260 66.559 619 200 6 1 615 1 616 0.0 824
MS.gene044964.t1 MTR_5g066800 64.490 628 208 4 1 615 1 626 0.0 823
MS.gene044964.t1 MTR_2g032550 66.069 613 204 3 6 615 7 618 0.0 819
MS.gene044964.t1 MTR_8g032650 65.862 621 207 4 1 619 1 618 0.0 816
MS.gene044964.t1 MTR_7g025820 66.667 597 195 3 1 595 1 595 0.0 812
MS.gene044964.t1 MTR_7g025720 64.734 621 214 4 1 619 1 618 0.0 810
MS.gene044964.t1 MTR_7g451380 64.563 618 215 3 1 615 1 617 0.0 808
MS.gene044964.t1 MTR_7g026110 63.695 617 218 5 1 615 1 613 0.0 805
MS.gene044964.t1 MTR_7g025790 64.563 618 214 4 1 616 1 615 0.0 802
MS.gene044964.t1 MTR_8g099945 65.147 614 208 4 7 618 36 645 0.0 799
MS.gene044964.t1 MTR_8g099795 65.309 614 207 4 7 618 36 645 0.0 799
MS.gene044964.t1 MTR_7g025620 64.918 610 209 4 1 608 1 607 0.0 799
MS.gene044964.t1 MTR_7g024030 64.812 611 210 4 1 609 1 608 0.0 799
MS.gene044964.t1 MTR_7g025630 64.251 621 203 6 1 619 1 604 0.0 791
MS.gene044964.t1 MTR_7g026090 64.553 615 212 3 1 613 1 611 0.0 791
MS.gene044964.t1 MTR_7g078190 64.000 625 216 7 1 619 1 622 0.0 789
MS.gene044964.t1 MTR_7g029415 64.332 614 211 7 6 615 13 622 0.0 786
MS.gene044964.t1 MTR_6g033870 63.099 626 224 3 2 621 3 627 0.0 786
MS.gene044964.t1 MTR_2g022050 65.210 618 211 3 1 615 1 617 0.0 786
MS.gene044964.t1 MTR_4g079590 63.502 611 218 4 1 608 1 609 0.0 785
MS.gene044964.t1 MTR_7g025740 63.328 619 213 6 1 608 1 616 0.0 783
MS.gene044964.t1 MTR_6g033955 62.460 626 229 2 1 621 1 625 0.0 781
MS.gene044964.t1 MTR_7g025770 62.783 618 225 4 1 615 1 616 0.0 781
MS.gene044964.t1 MTR_8g103930 62.124 631 206 7 1 616 1 613 0.0 779
MS.gene044964.t1 MTR_7g011590 64.019 617 205 5 1 615 1 602 0.0 778
MS.gene044964.t1 MTR_2g437440 63.107 618 206 4 1 615 1 599 0.0 777
MS.gene044964.t1 MTR_7g078210 63.782 624 218 6 1 619 1 621 0.0 776
MS.gene044964.t1 MTR_7g026170 63.328 619 220 6 1 615 1 616 0.0 776
MS.gene044964.t1 MTR_6g033820 61.356 634 239 2 1 629 1 633 0.0 776
MS.gene044964.t1 MTR_2g038270 61.146 628 228 7 1 615 1 625 0.0 764
MS.gene044964.t1 MTR_7g026130 63.124 621 217 7 1 613 1 617 0.0 751
MS.gene044964.t1 MTR_7g074460 62.783 618 208 4 1 616 1 598 0.0 751
MS.gene044964.t1 MTR_2g032580 62.359 619 196 6 1 615 1 586 0.0 745
MS.gene044964.t1 MTR_4g027145 59.905 631 234 8 1 615 1 628 0.0 737
MS.gene044964.t1 MTR_7g026140 60.420 619 220 8 1 614 1 599 0.0 731
MS.gene044964.t1 MTR_7g025260 62.478 573 211 3 49 619 21 591 0.0 724
MS.gene044964.t1 MTR_1g017130 59.083 611 205 7 1 608 1 569 0.0 713
MS.gene044964.t1 MTR_7g451360 58.937 621 190 7 1 617 1 560 0.0 702
MS.gene044964.t1 MTR_6g033800 65.209 526 180 2 90 615 1 523 0.0 697
MS.gene044964.t1 MTR_2g040260 83.000 400 66 1 1 400 1030 1427 0.0 689
MS.gene044964.t1 MTR_2g040370 87.047 386 48 1 4 389 1024 1407 0.0 689
MS.gene044964.t1 MTR_2g040370 85.195 385 54 2 4 387 1408 1790 0.0 652
MS.gene044964.t1 MTR_2g040370 87.047 386 48 1 4 389 1024 1407 0.0 689
MS.gene044964.t1 MTR_2g040370 85.233 386 54 2 4 388 1408 1791 0.0 654
MS.gene044964.t1 MTR_2g040160 82.500 400 68 1 1 400 1101 1498 0.0 677
MS.gene044964.t1 MTR_7g007000 56.704 619 217 7 1 614 1 573 0.0 674
MS.gene044964.t1 MTR_7g035155 56.149 618 212 7 1 615 1 562 0.0 663
MS.gene044964.t1 MTR_4g063720 89.315 365 33 3 287 648 217 578 0.0 652
MS.gene044964.t1 MTR_4g063720 91.964 224 18 0 1 224 1 224 1.35e-144 432
MS.gene044964.t1 MTR_2g040220 73.128 454 104 4 1 436 1010 1463 0.0 652
MS.gene044964.t1 MTR_2g040220 56.872 211 34 4 446 648 1397 1558 1.66e-55 205
MS.gene044964.t1 MTR_1g041565 55.700 614 195 10 6 615 2 542 0.0 645
MS.gene044964.t1 MTR_2g040350 79.449 399 76 3 6 400 1035 1431 0.0 645
MS.gene044964.t1 MTR_2g040350 79.449 399 76 3 6 400 817 1213 0.0 644
MS.gene044964.t1 MTR_2g032160 73.333 375 98 1 1 373 1 375 0.0 582
MS.gene044964.t1 MTR_2g032160 43.434 99 55 1 519 616 365 463 9.25e-13 71.2
MS.gene044964.t1 MTR_2g010020 52.422 578 248 10 10 580 58 615 0.0 567
MS.gene044964.t1 MTR_2g010020 52.422 578 248 10 10 580 57 614 0.0 567
MS.gene044964.t1 MTR_4g092920 51.903 578 252 9 10 578 54 614 0.0 560
MS.gene044964.t1 MTR_2g005690 47.649 638 296 12 10 637 72 681 0.0 533
MS.gene044964.t1 MTR_6g034005 49.360 547 254 8 80 615 2 536 1.05e-166 494
MS.gene044964.t1 MTR_4g092920 51.911 497 214 8 90 578 1 480 3.98e-164 481
MS.gene044964.t1 MTR_1g077230 74.823 282 69 1 1 280 1 282 1.44e-152 442
MS.gene044964.t1 MTR_4g088515 55.814 430 102 7 9 436 276 619 5.32e-146 437
MS.gene044964.t1 MTR_6g033810 59.337 332 85 3 86 415 8 291 3.04e-126 375
MS.gene044964.t1 MTR_7g026050 51.872 374 151 3 243 615 1 346 4.69e-126 377
MS.gene044964.t1 MTR_7g026080 71.138 246 69 1 1 244 1 246 1.54e-122 364
MS.gene044964.t1 MTR_6g033855 52.493 381 93 5 86 464 8 302 4.52e-120 360
MS.gene044964.t1 MTR_2g040355 47.289 461 82 10 187 646 2 302 6.02e-110 333
MS.gene044964.t1 MTR_2g031670 69.778 225 66 1 21 243 43 267 1.86e-108 331
MS.gene044964.t1 MTR_2g031670 74.627 67 16 1 342 408 275 340 2.43e-21 96.3
MS.gene044964.t1 MTR_5g006180 35.388 503 284 11 9 494 29 507 1.13e-88 287
MS.gene044964.t1 MTR_1g077240 54.545 297 125 4 320 615 1 288 4.20e-88 276
MS.gene044964.t1 MTR_2g102180 34.932 438 269 4 10 434 4 438 3.28e-84 283
MS.gene044964.t1 MTR_4g012050 34.932 438 269 4 10 434 4 438 5.31e-83 279
MS.gene044964.t1 MTR_1207s0010 71.591 176 49 1 106 281 1 175 1.07e-81 256
MS.gene044964.t1 MTR_5g097190 54.545 253 66 4 4 254 153 358 1.21e-79 257
MS.gene044964.t1 MTR_6g478100 60.849 212 69 2 36 247 10 207 7.78e-79 253
MS.gene044964.t1 MTR_6g478100 40.000 95 56 1 515 608 208 302 1.87e-12 69.3
MS.gene044964.t1 MTR_5g092570 34.660 427 270 4 10 430 4 427 1.81e-76 260
MS.gene044964.t1 MTR_3g051300 33.333 420 275 4 10 428 4 419 1.14e-75 258
MS.gene044964.t1 MTR_5g090110 33.874 493 273 13 9 482 28 486 5.96e-74 247
MS.gene044964.t1 MTR_4g115780 34.774 509 306 10 9 496 140 643 7.50e-70 240
MS.gene044964.t1 MTR_5g005870 41.718 326 178 5 265 587 35 351 3.09e-68 228
MS.gene044964.t1 MTR_4g107920 32.143 504 307 14 10 496 21 506 1.22e-67 231
MS.gene044964.t1 MTR_3g081170 27.947 526 334 13 10 498 27 544 1.09e-57 209
MS.gene044964.t1 MTR_6g033910 47.186 231 59 4 72 300 19 188 2.19e-55 187
MS.gene044964.t1 MTR_1g116250 44.364 275 110 5 342 615 56 288 1.11e-54 188
MS.gene044964.t1 MTR_7g074540 48.756 201 102 1 416 616 1 200 1.88e-54 185
MS.gene044964.t1 MTR_7g026180 75.630 119 29 0 74 192 21 139 2.84e-53 186
MS.gene044964.t1 MTR_7g026180 35.023 217 108 4 401 615 144 329 6.78e-28 115
MS.gene044964.t1 MTR_7g451390 49.180 183 91 2 436 617 10 191 4.07e-48 167
MS.gene044964.t1 MTR_2g017710 43.077 260 63 6 223 480 17 193 5.35e-48 170
MS.gene044964.t1 MTR_5g005890 38.326 227 89 4 72 297 5 181 1.32e-42 152
MS.gene044964.t1 MTR_1g068900 51.316 152 66 4 426 573 23 170 3.98e-38 139
MS.gene044964.t1 MTR_6g033805 76.056 71 17 0 1 71 1 71 7.75e-32 118
MS.gene044964.t1 MTR_4g027235 73.333 75 18 1 1 73 1 75 4.36e-30 113
MS.gene044964.t1 MTR_4g027085 73.333 75 18 1 1 73 1 75 4.36e-30 113
MS.gene044964.t1 MTR_7g026190 57.447 94 31 2 286 379 9 93 7.17e-28 112
MS.gene044964.t1 MTR_7g026190 39.496 119 69 2 498 616 94 209 1.67e-15 76.3
MS.gene044964.t1 MTR_2g040375 76.667 60 14 0 398 457 51 110 6.84e-23 94.7
MS.gene044964.t1 MTR_4g115860 46.739 92 49 0 396 487 29 120 2.23e-22 93.2
MS.gene044964.t1 MTR_6g033815 54.930 71 32 0 524 594 1 71 2.44e-20 87.0
MS.gene044964.t1 MTR_7g021430 52.000 75 36 0 213 287 1 75 1.96e-18 84.3
MS.gene044964.t1 MTR_7g026095 45.652 92 50 0 482 573 256 347 3.12e-18 87.0
MS.gene044964.t1 MTR_7g026095 50.000 88 28 2 86 173 189 260 8.46e-17 82.8
MS.gene044964.t1 MTR_7g026160 37.500 120 49 4 296 389 72 191 2.79e-12 67.4
MS.gene044964.t1 MTR_6g033995 53.226 62 21 2 1 60 1 56 8.82e-11 58.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene044964.t1 AT5G02500 91.551 651 52 1 1 648 1 651 0.0 1230
MS.gene044964.t1 AT3G12580 93.241 651 40 3 1 648 1 650 0.0 1229
MS.gene044964.t1 AT3G09440 91.680 649 53 1 1 648 1 649 0.0 1225
MS.gene044964.t1 AT3G09440 91.680 649 53 1 1 648 1 649 0.0 1225
MS.gene044964.t1 AT3G09440 91.680 649 53 1 1 648 1 649 0.0 1225
MS.gene044964.t1 AT3G09440 91.680 649 53 1 1 648 1 649 0.0 1225
MS.gene044964.t1 AT5G02490 89.893 653 61 2 1 648 1 653 0.0 1203
MS.gene044964.t1 AT1G56410 87.884 619 73 1 1 619 1 617 0.0 1127
MS.gene044964.t1 AT1G16030 83.385 650 102 3 1 648 1 646 0.0 1120
MS.gene044964.t1 AT5G42020 64.904 624 212 5 7 627 35 654 0.0 829
MS.gene044964.t1 AT5G42020 64.904 624 212 5 7 627 40 659 0.0 827
MS.gene044964.t1 AT5G28540 65.472 614 206 4 7 618 35 644 0.0 824
MS.gene044964.t1 AT1G09080 63.132 613 221 3 7 618 40 648 0.0 787
MS.gene044964.t1 AT1G09080 63.132 613 221 3 7 618 50 658 0.0 786
MS.gene044964.t1 AT5G02500 93.655 394 25 0 1 394 1 394 0.0 777
MS.gene044964.t1 AT5G02500 77.206 136 28 1 516 648 386 521 4.07e-57 202
MS.gene044964.t1 AT5G42020 58.974 624 194 10 7 627 35 599 0.0 701
MS.gene044964.t1 AT5G09590 52.768 578 247 9 10 580 60 618 0.0 560
MS.gene044964.t1 AT4G24280 49.349 614 285 11 10 617 81 674 0.0 541
MS.gene044964.t1 AT5G49910 48.644 627 295 11 10 628 81 688 0.0 539
MS.gene044964.t1 AT4G37910 51.903 578 252 9 10 578 55 615 0.0 532
MS.gene044964.t1 AT4G37910 51.903 578 252 9 10 578 55 615 0.0 532
MS.gene044964.t1 AT1G79930 29.468 733 416 14 10 648 4 729 6.04e-91 300
MS.gene044964.t1 AT2G32120 34.961 512 305 9 9 508 30 525 2.98e-90 291
MS.gene044964.t1 AT2G32120 34.961 512 305 9 9 508 30 525 2.98e-90 291
MS.gene044964.t1 AT1G79930 29.059 733 419 15 10 648 4 729 8.59e-89 293
MS.gene044964.t1 AT1G79920 35.845 438 265 4 10 434 4 438 1.36e-86 286
MS.gene044964.t1 AT1G79920 35.845 438 265 4 10 434 4 438 1.91e-86 286
MS.gene044964.t1 AT1G79920 35.845 438 265 4 10 434 4 438 1.91e-86 286
MS.gene044964.t1 AT1G79920 35.845 438 265 4 10 434 4 438 1.91e-86 286
MS.gene044964.t1 AT1G11660 26.975 671 411 10 10 619 4 656 3.00e-83 278
MS.gene044964.t1 AT1G11660 26.975 671 411 10 10 619 4 656 3.00e-83 278
MS.gene044964.t1 AT1G11660 26.975 671 411 10 10 619 4 656 3.00e-83 278
MS.gene044964.t1 AT1G11660 27.044 636 385 10 45 619 2 619 3.77e-75 255
MS.gene044964.t1 AT4G16660 25.874 715 418 18 5 612 46 755 1.13e-61 221
MS.gene044964.t1 AT4G16660 25.734 715 419 18 5 612 22 731 2.87e-61 219

Find 158 sgRNAs with CRISPR-Local

Find 190 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGATGTCACTCCATTGTCTT+TGG 0.187672 7.1:-73273774 MS.gene044964:CDS
TTGGGAAAATTCGAGCTTTC+CGG 0.198288 7.1:-73273590 MS.gene044964:CDS
GGTTCAAGATTTGTTGCTTT+TGG 0.209433 7.1:-73273795 MS.gene044964:CDS
TAATCGACTTCTTCAATCTT+AGG 0.232445 7.1:+73273050 None:intergenic
TGCAACAGTTGCTGAACTTT+GGG 0.247455 7.1:+73273926 None:intergenic
AGAGAAAACTTGCTCCTTCT+TGG 0.262011 7.1:+73273691 None:intergenic
TCTTAAACTCTTGAACAAAA+TGG 0.275265 7.1:+73274239 None:intergenic
GTTCATGATGTTGTTCTTGT+TGG 0.297305 7.1:-73273965 MS.gene044964:CDS
CGTTCGGTTTCCTTGATCAT+TGG 0.309046 7.1:+73275517 None:intergenic
TGCATACGGTCTTGACAAAA+AGG 0.309195 7.1:-73274419 MS.gene044964:CDS
TGCTGAAGAAATTTCATCTA+TGG 0.318039 7.1:-73274617 MS.gene044964:CDS
TTACCGAAAACAGTGTTAAC+AGG 0.319243 7.1:+73275419 None:intergenic
TGATACATCTTAGCAATGAT+TGG 0.323430 7.1:+73273143 None:intergenic
GATGTCACTCCATTGTCTTT+GGG 0.328461 7.1:-73273773 MS.gene044964:CDS
GAATGTGTTGATCTTTGATT+TGG 0.334883 7.1:-73274377 MS.gene044964:CDS
CATACTCGTGTGTTGGAGTA+TGG 0.336614 7.1:-73275565 MS.gene044964:CDS
TCCCAACAAGTTGTTGTCTC+TGG 0.342182 7.1:+73273607 None:intergenic
CTCTCTCACCTTCATAAACT+TGG 0.342869 7.1:+73273636 None:intergenic
CCCAGATCTATTCCGATTGC+AGG 0.350491 7.1:+73275593 None:intergenic
ATCCTTTGTGGCTTGACGTT+GGG 0.355730 7.1:+73274504 None:intergenic
TTGCAACAGTTGCTGAACTT+TGG 0.356122 7.1:+73273925 None:intergenic
GTTGGAATTGTTGTGTTCCT+TGG 0.367995 7.1:+73273713 None:intergenic
AAGGATGCCGGTGTCATTGC+AGG 0.369704 7.1:-73274487 MS.gene044964:CDS
CCATAAGCAACAGCCTCGTC+TGG 0.372870 7.1:+73273863 None:intergenic
CATGTTAAGTTCCTCAAATC+TGG 0.373759 7.1:+73274057 None:intergenic
CATGAAGCTATGGCCTTTCA+AGG 0.377893 7.1:-73274707 MS.gene044964:CDS
TCCTGCAATCGGAATAGATC+TGG 0.379604 7.1:-73275594 MS.gene044964:CDS
CCAGACGAGGCTGTTGCTTA+TGG 0.380897 7.1:-73273863 MS.gene044964:CDS
ACAGATGCTAAACGTTTGAT+TGG 0.381796 7.1:-73274763 MS.gene044964:intron
CTGTTGCAAGATTTCTTCAA+TGG 0.390736 7.1:-73273911 MS.gene044964:CDS
CCTCCAGCAGCAGGTGGTGC+TGG 0.395029 7.1:-73273074 MS.gene044964:CDS
TCCATACCACCAGCCATATC+AGG 0.402194 7.1:+73273107 None:intergenic
GGTTGATGCAAAGAATGCTT+TGG 0.410300 7.1:-73273351 MS.gene044964:CDS
AATGACACCGGCATCCTTTG+TGG 0.411720 7.1:+73274492 None:intergenic
TGAGATTGATTCTTTGTTTG+AGG 0.412145 7.1:-73274110 MS.gene044964:CDS
AGGTGGAGGTGCTCCTGATA+TGG 0.414427 7.1:-73273120 MS.gene044964:CDS
CGACAAAGGAAGGTTGTCTA+AGG 0.418046 7.1:-73273441 MS.gene044964:CDS
CTTGTAGTTAACACCAATCA+TGG 0.420612 7.1:+73274660 None:intergenic
GGATTTGTTCAGAAAGTGTA+TGG 0.424572 7.1:-73274035 MS.gene044964:CDS
ACAATTAAAGATGAGAAGAT+TGG 0.425467 7.1:-73273302 MS.gene044964:CDS
TCCTGATATGGCTGGTGGTA+TGG 0.425793 7.1:-73273108 MS.gene044964:CDS
TTCAAGGTTACTGCTGGTCC+TGG 0.432406 7.1:-73274691 MS.gene044964:CDS
CATGATGTTGTTCTTGTTGG+TGG 0.435475 7.1:-73273962 MS.gene044964:CDS
CAACATAAGACGGCGTCGTT+CGG 0.436894 7.1:+73275501 None:intergenic
GATACATCTTAGCAATGATT+GGG 0.442977 7.1:+73273144 None:intergenic
AATGTGTTGATCTTTGATTT+GGG 0.445462 7.1:-73274376 MS.gene044964:CDS
CTCAATCTCCTAAGGGCCCT+AGG 0.455669 7.1:+73274187 None:intergenic
AAAACTTGCTCCTTCTTGGT+TGG 0.457926 7.1:+73273695 None:intergenic
TCTGCTGAAGACAAAACAAC+TGG 0.462288 7.1:-73273491 MS.gene044964:CDS
GCAAGATTTCTTCAATGGTA+AGG 0.462326 7.1:-73273906 MS.gene044964:CDS
TGGCCTTTCAAGGTTACTGC+TGG 0.462623 7.1:-73274697 MS.gene044964:CDS
TAAGGAAGAAATTGAGAAGA+TGG 0.466344 7.1:-73273423 MS.gene044964:CDS
CCATCAACAATGGCCGGAAA+AGG 0.467610 7.1:-73275623 None:intergenic
AACCAGAGACAACAACTTGT+TGG 0.470053 7.1:-73273609 MS.gene044964:CDS
ACTCATCAGCCTCTGCCAAC+TGG 0.471841 7.1:+73273204 None:intergenic
TTCTTGTTGGTGGTTCAACT+AGG 0.473139 7.1:-73273952 MS.gene044964:CDS
CGGTGATGCTGCTAAGAATC+AGG 0.474840 7.1:-73275453 MS.gene044964:CDS
TTGATCTTTGATTTGGGAGG+TGG 0.474882 7.1:-73274370 MS.gene044964:CDS
GGACCAGCACCACCTGCTGC+TGG 0.476038 7.1:+73273071 None:intergenic
ACTGCTGGTGATACCCATCT+TGG 0.479477 7.1:-73274292 MS.gene044964:CDS
ATGCGGTTCTCAATCTCCTA+AGG 0.480661 7.1:+73274179 None:intergenic
GAGATTGATTCTTTGTTTGA+GGG 0.481259 7.1:-73274109 MS.gene044964:CDS
GAGTGGTGAAGGCAATGAAA+AGG 0.481276 7.1:-73273816 MS.gene044964:CDS
ACCAGAGACAACAACTTGTT+GGG 0.487350 7.1:-73273608 MS.gene044964:CDS
CATCCTTTGTGGCTTGACGT+TGG 0.487819 7.1:+73274503 None:intergenic
GAGATCATCGCCAATGATCA+AGG 0.487997 7.1:-73275527 MS.gene044964:CDS
CAAAATCTTCACCACCAAGA+TGG 0.490509 7.1:+73274278 None:intergenic
AATCACCCGTGCCAGATTTG+AGG 0.493096 7.1:-73274068 MS.gene044964:CDS
CCTTCCTTTGTCGTTGGTGA+TGG 0.494022 7.1:+73273451 None:intergenic
GCGGAAACCCTAGGGCCCTT+AGG 0.496965 7.1:-73274195 MS.gene044964:CDS
TTTGAAGTTAAGGCCACTGC+TGG 0.497920 7.1:-73274307 MS.gene044964:CDS
GGAGGTGCTCCTGATATGGC+TGG 0.498862 7.1:-73273116 MS.gene044964:CDS
ACGGGGAGCTGGAGGAATGC+CGG 0.501984 7.1:+73273571 None:intergenic
TGAGGAACACCACGGGGAGC+TGG 0.503287 7.1:+73273560 None:intergenic
AGAAATTGAGAAGATGGTTG+AGG 0.504892 7.1:-73273417 MS.gene044964:CDS
AAAGGTGAAGGTCCTGCAAT+CGG 0.506751 7.1:-73275605 MS.gene044964:CDS
TGACGCTGCAATTCAGTGGT+TGG 0.507402 7.1:-73273234 MS.gene044964:CDS
ATCATTGCTAAGATGTATCA+AGG 0.508198 7.1:-73273140 MS.gene044964:CDS
ATGCTAAACGTTTGATTGGA+AGG 0.508528 7.1:-73274759 MS.gene044964:CDS
TCGAAACAAACTGTGATTTG+AGG 0.509328 7.1:+73273542 None:intergenic
GATGAAGTTCCTCCAGCAGC+AGG 0.518012 7.1:-73273083 MS.gene044964:CDS
GTGTTTGAGAGATGCTAAGA+TGG 0.518945 7.1:-73273999 MS.gene044964:CDS
TGGGAATCGTTGAAGTAAGC+TGG 0.520331 7.1:+73274523 None:intergenic
AAAATCTTCACCACCAAGAT+GGG 0.521512 7.1:+73274279 None:intergenic
AGGATATTAGCGGAAACCCT+AGG 0.521546 7.1:-73274204 MS.gene044964:CDS
TCTCTCAAACACTTCTCTAC+AGG 0.523861 7.1:+73274010 None:intergenic
TCAATCTCCTAAGGGCCCTA+GGG 0.524076 7.1:+73274188 None:intergenic
CAGATTTGAGGAACTTAACA+TGG 0.526448 7.1:-73274056 MS.gene044964:CDS
AAACAAAGAATCAATCTCAA+TGG 0.529138 7.1:+73274114 None:intergenic
TTGAATCCATCAACAATGGC+CGG 0.536348 7.1:-73275629 None:intergenic
CATGATTGGTGTTAACTACA+AGG 0.536564 7.1:-73274659 MS.gene044964:CDS
ACTGATAGTGAGAGGTTGAT+CGG 0.537906 7.1:-73275473 MS.gene044964:CDS
TGAGTTTGAAGATAAGATGA+AGG 0.542099 7.1:-73273186 MS.gene044964:CDS
GCTGGTGATACCCATCTTGG+TGG 0.543324 7.1:-73274289 MS.gene044964:CDS
AGACAACCTTCCTTTGTCGT+TGG 0.545078 7.1:+73273445 None:intergenic
GTGTTGATCTTTGATTTGGG+AGG 0.545278 7.1:-73274373 MS.gene044964:CDS
CCTGGTGAAAAGCCCATGAT+TGG 0.545365 7.1:-73274673 MS.gene044964:CDS
GAAATACAAGGCAGAAGATG+AGG 0.548776 7.1:-73273387 MS.gene044964:CDS
TTCAGAGTGACATGAAGCTA+TGG 0.549717 7.1:-73274717 MS.gene044964:CDS
GAGATTGCTGAAGCTTATCT+CGG 0.552535 7.1:-73274577 MS.gene044964:CDS
GTCACTTCTTACTATTGAAG+AGG 0.553420 7.1:-73274335 MS.gene044964:CDS
GCAACAGTTGCTGAACTTTG+GGG 0.554137 7.1:+73273927 None:intergenic
TAGCAATGATTGGGTTGCAA+AGG 0.559904 7.1:+73273153 None:intergenic
TTATGACAGTTCTCATTCCA+AGG 0.560782 7.1:-73273730 MS.gene044964:CDS
GTTTAAGAGGAAGAACAAGA+AGG 0.567567 7.1:-73274224 MS.gene044964:CDS
TATGCAATAGCTGCAGCAGT+TGG 0.569856 7.1:+73274436 None:intergenic
ACTGCTGCAGCTATTGCATA+CGG 0.570141 7.1:-73274433 MS.gene044964:CDS
CGTCAAGCCACAAAGGATGC+CGG 0.572792 7.1:-73274499 MS.gene044964:CDS
CACAACAATTCCAACCAAGA+AGG 0.576868 7.1:-73273705 MS.gene044964:CDS
TGCGGTTCTCAATCTCCTAA+GGG 0.579664 7.1:+73274180 None:intergenic
GGACAGTAACCAGTTGGCAG+AGG 0.580101 7.1:-73273213 MS.gene044964:CDS
AAGTTCCTCAAATCTGGCAC+GGG 0.580117 7.1:+73274063 None:intergenic
CCTGCAATCGGAATAGATCT+GGG 0.580300 7.1:-73275593 MS.gene044964:CDS
GTCTTGATCCAAGTTTATGA+AGG 0.581559 7.1:-73273644 MS.gene044964:CDS
GGATATTAGCGGAAACCCTA+GGG 0.581582 7.1:-73274203 MS.gene044964:CDS
GGACCAGCAGTAACCTTGAA+AGG 0.581876 7.1:+73274694 None:intergenic
AAATCTGGCACGGGTGATTG+TGG 0.583692 7.1:+73274072 None:intergenic
CATAAGCAACAGCCTCGTCT+GGG 0.584074 7.1:+73273864 None:intergenic
TCTTTGGGTCTAGAAACTGC+TGG 0.584391 7.1:-73273758 MS.gene044964:CDS
GGAACAACATACTCGTGTGT+TGG 0.592871 7.1:-73275572 MS.gene044964:CDS
TAAGTTCCTCAAATCTGGCA+CGG 0.594794 7.1:+73274062 None:intergenic
CCAGCACCACCTGCTGCTGG+AGG 0.596593 7.1:+73273074 None:intergenic
TTGTAGTTAACACCAATCAT+GGG 0.597119 7.1:+73274661 None:intergenic
AAGAACAAGAAGGATATTAG+CGG 0.598309 7.1:-73274214 MS.gene044964:CDS
CCATCACCAACGACAAAGGA+AGG 0.602128 7.1:-73273451 MS.gene044964:CDS
GCTAAGATGTATCAAGGTGG+AGG 0.602520 7.1:-73273134 MS.gene044964:CDS
TGTTTCGACATTGATGCCAA+CGG 0.605203 7.1:-73273527 MS.gene044964:CDS
CAAAATCGCTGCTTGTACAG+CGG 0.607717 7.1:+73273838 None:intergenic
GTTTCTAGACCCAAAGACAA+TGG 0.607775 7.1:+73273764 None:intergenic
GTGGTTGGACAGTAACCAGT+TGG 0.608307 7.1:-73273219 MS.gene044964:CDS
ACAATGGCCGGAAAAGGTGA+AGG 0.610468 7.1:-73275617 MS.gene044964:CDS
TGTGATTTGAGGAACACCAC+GGG 0.611264 7.1:+73273553 None:intergenic
ATTACCATCACCAACGACAA+AGG 0.613058 7.1:-73273455 MS.gene044964:CDS
AAAACTATGCATACAACATG+AGG 0.615829 7.1:-73273328 MS.gene044964:CDS
TCTCTTCGCTCTCTCACATG+CGG 0.617111 7.1:+73274162 None:intergenic
TACCGAAAACAGTGTTAACA+GGG 0.619335 7.1:+73275420 None:intergenic
TCAGTAAAAGCAACATAAGA+CGG 0.621546 7.1:+73275491 None:intergenic
TCACTTCTTACTATTGAAGA+GGG 0.626386 7.1:-73274334 MS.gene044964:CDS
ATTGAGTCCTGCAATGACAC+CGG 0.629941 7.1:+73274480 None:intergenic
TGGATCAAAGCTTTCACCAG+AGG 0.630537 7.1:-73273282 MS.gene044964:CDS
GGAACACCACGGGGAGCTGG+AGG 0.631612 7.1:+73273563 None:intergenic
TGGTGTTAACTACAAGGGCG+AGG 0.634934 7.1:-73274653 MS.gene044964:CDS
AGAGACATTCAAGATACCGT+TGG 0.636371 7.1:+73273511 None:intergenic
TGAGGAAGCAGAGAAATACA+AGG 0.640542 7.1:-73273399 MS.gene044964:CDS
GGTGCTCCTGATATGGCTGG+TGG 0.645251 7.1:-73273113 MS.gene044964:CDS
CAAGAGTATCAACCCAGACG+AGG 0.648278 7.1:-73273876 MS.gene044964:CDS
TTCCCAACGTCAAGCCACAA+AGG 0.648805 7.1:-73274506 MS.gene044964:CDS
GAAGTTCCTCCAGCAGCAGG+TGG 0.652201 7.1:-73273080 MS.gene044964:CDS
CAATTGACGCTGCAATTCAG+TGG 0.657113 7.1:-73273238 MS.gene044964:CDS
ATGATTGGTGTTAACTACAA+GGG 0.659475 7.1:-73274658 MS.gene044964:CDS
AAGATGGGTATCACCAGCAG+TGG 0.661313 7.1:+73274294 None:intergenic
CTGTGATTTGAGGAACACCA+CGG 0.668774 7.1:+73273552 None:intergenic
TTGGGTCTAGAAACTGCTGG+TGG 0.674387 7.1:-73273755 MS.gene044964:CDS
TAAACTTGGATCAAGACACC+AGG 0.678843 7.1:+73273650 None:intergenic
GGCATTCCTCCAGCTCCCCG+TGG 0.680342 7.1:-73273569 MS.gene044964:CDS
ACTTACTCAGACAATCAACC+TGG 0.684536 7.1:-73273668 MS.gene044964:CDS
ATTGCTAAGATGTATCAAGG+TGG 0.733799 7.1:-73273137 MS.gene044964:CDS
GTGATTTGAGGAACACCACG+GGG 0.760451 7.1:+73273554 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TGAAAATAAATAATTAATCT+GGG - chr7.1:73273366-73273385 MS.gene044964:CDS 10.0%
!! TTGAAAATAAATAATTAATC+TGG - chr7.1:73273365-73273384 MS.gene044964:CDS 10.0%
!! ACAAATAATTGAAAATTAAC+CGG + chr7.1:73273399-73273418 None:intergenic 15.0%
!! GAAAATAAATAATTAATCTG+GGG - chr7.1:73273367-73273386 MS.gene044964:CDS 15.0%
!!! ACGTATTGAATTTTAATTAT+TGG - chr7.1:73273827-73273846 MS.gene044964:CDS 15.0%
!! TGCATGATACTATTTAATTA+AGG + chr7.1:73273744-73273763 None:intergenic 20.0%
!!! TGTAATTTGTTTTTTTGAGT+TGG - chr7.1:73273622-73273641 MS.gene044964:CDS 20.0%
! AAACAAAGAATCAATCTCAA+TGG + chr7.1:73274552-73274571 None:intergenic 25.0%
! AATAGTATCATGCAAAAGAT+TGG - chr7.1:73273750-73273769 MS.gene044964:CDS 25.0%
! ACAATTAAAGATGAGAAGAT+TGG - chr7.1:73275361-73275380 MS.gene044964:intron 25.0%
! TCGTTAATCAACATGAATAA+AGG + chr7.1:73273545-73273564 None:intergenic 25.0%
! TCTTAAACTCTTGAACAAAA+TGG + chr7.1:73274427-73274446 None:intergenic 25.0%
!! AATGTGTTGATCTTTGATTT+GGG - chr7.1:73274287-73274306 MS.gene044964:CDS 25.0%
!! ATTTTGTTCAAGAGTTTAAG+AGG - chr7.1:73274426-73274445 MS.gene044964:CDS 25.0%
!! TTATTCATGTTGATTAACGA+GGG - chr7.1:73273545-73273564 MS.gene044964:CDS 25.0%
!! TTTATTCATGTTGATTAACG+AGG - chr7.1:73273544-73273563 MS.gene044964:CDS 25.0%
!! TTTGAAGTTTGATTGCTTAT+TGG - chr7.1:73273855-73273874 MS.gene044964:CDS 25.0%
!!! TGAAGATTTTGATAACAGAA+TGG - chr7.1:73274397-73274416 MS.gene044964:CDS 25.0%
!!! TTTGTTTTTTTGAGTTGGAT+CGG - chr7.1:73273627-73273646 MS.gene044964:CDS 25.0%
AAAACTATGCATACAACATG+AGG - chr7.1:73275335-73275354 MS.gene044964:intron 30.0%
AAACTCACCATTCAATGTAA+GGG + chr7.1:73273586-73273605 None:intergenic 30.0%
AAGAACAAGAAGGATATTAG+CGG - chr7.1:73274449-73274468 MS.gene044964:CDS 30.0%
ATCATTGCTAAGATGTATCA+AGG - chr7.1:73275523-73275542 MS.gene044964:CDS 30.0%
ATTTGATCCCTTACATTGAA+TGG - chr7.1:73273576-73273595 MS.gene044964:CDS 30.0%
GATACATCTTAGCAATGATT+GGG + chr7.1:73275522-73275541 None:intergenic 30.0%
TAAGGAAGAAATTGAGAAGA+TGG - chr7.1:73275240-73275259 MS.gene044964:intron 30.0%
TCACTTCTTACTATTGAAGA+GGG - chr7.1:73274329-73274348 MS.gene044964:CDS 30.0%
TCAGTAAAAGCAACATAAGA+CGG + chr7.1:73273175-73273194 None:intergenic 30.0%
TGAGTTTGAAGATAAGATGA+AGG - chr7.1:73275477-73275496 MS.gene044964:CDS 30.0%
TGATACATCTTAGCAATGAT+TGG + chr7.1:73275523-73275542 None:intergenic 30.0%
TGCTGAAGAAATTTCATCTA+TGG - chr7.1:73274046-73274065 MS.gene044964:CDS 30.0%
TTGTAGTTAACACCAATCAT+GGG + chr7.1:73274005-73274024 None:intergenic 30.0%
! GAATGTGTTGATCTTTGATT+TGG - chr7.1:73274286-73274305 MS.gene044964:CDS 30.0%
! GAGATTGATTCTTTGTTTGA+GGG - chr7.1:73274554-73274573 MS.gene044964:CDS 30.0%
! TAATCGACTTCTTCAATCTT+AGG + chr7.1:73275616-73275635 None:intergenic 30.0%
! TGAGATTGATTCTTTGTTTG+AGG - chr7.1:73274553-73274572 MS.gene044964:CDS 30.0%
!! ATGATTGGTGTTAACTACAA+GGG - chr7.1:73274005-73274024 MS.gene044964:CDS 30.0%
!!! AGAGGGTATTTTTGAAGTTA+AGG - chr7.1:73274346-73274365 MS.gene044964:CDS 30.0%
AAAATCTTCACCACCAAGAT+GGG + chr7.1:73274387-73274406 None:intergenic 35.0%
ACAGATGCTAAACGTTTGAT+TGG - chr7.1:73273900-73273919 MS.gene044964:CDS 35.0%
AGAAATTGAGAAGATGGTTG+AGG - chr7.1:73275246-73275265 MS.gene044964:intron 35.0%
AGATGAGGAACACAAAAAGA+AGG - chr7.1:73275291-73275310 MS.gene044964:intron 35.0%
ATGCTAAACGTTTGATTGGA+AGG - chr7.1:73273904-73273923 MS.gene044964:CDS 35.0%
ATTGCTAAGATGTATCAAGG+TGG - chr7.1:73275526-73275545 MS.gene044964:CDS 35.0%
CAAACTCACCATTCAATGTA+AGG + chr7.1:73273587-73273606 None:intergenic 35.0%
CAGATTTGAGGAACTTAACA+TGG - chr7.1:73274607-73274626 MS.gene044964:CDS 35.0%
CATGTTAAGTTCCTCAAATC+TGG + chr7.1:73274609-73274628 None:intergenic 35.0%
CTGTTGCAAGATTTCTTCAA+TGG - chr7.1:73274752-73274771 MS.gene044964:CDS 35.0%
CTTGTAGTTAACACCAATCA+TGG + chr7.1:73274006-73274025 None:intergenic 35.0%
GCAAGATTTCTTCAATGGTA+AGG - chr7.1:73274757-73274776 MS.gene044964:CDS 35.0%
GTCACTTCTTACTATTGAAG+AGG - chr7.1:73274328-73274347 MS.gene044964:CDS 35.0%
GTCTTGATCCAAGTTTATGA+AGG - chr7.1:73275019-73275038 MS.gene044964:intron 35.0%
GTTCATGATGTTGTTCTTGT+TGG - chr7.1:73274698-73274717 MS.gene044964:CDS 35.0%
GTTTAAGAGGAAGAACAAGA+AGG - chr7.1:73274439-73274458 MS.gene044964:CDS 35.0%
TACCGAAAACAGTGTTAACA+GGG + chr7.1:73273246-73273265 None:intergenic 35.0%
TCGAAACAAACTGTGATTTG+AGG + chr7.1:73275124-73275143 None:intergenic 35.0%
TTACCGAAAACAGTGTTAAC+AGG + chr7.1:73273247-73273266 None:intergenic 35.0%
TTATGACAGTTCTCATTCCA+AGG - chr7.1:73274933-73274952 MS.gene044964:intron 35.0%
! AACCCTGTTAACACTGTTTT+CGG - chr7.1:73273241-73273260 MS.gene044964:CDS 35.0%
! AATTAATCTGGGGTCTTATC+CGG - chr7.1:73273377-73273396 MS.gene044964:CDS 35.0%
! GGATTTGTTCAGAAAGTGTA+TGG - chr7.1:73274628-73274647 MS.gene044964:CDS 35.0%
! TCAATCTTCTTTTTGTCCTC+TGG + chr7.1:73275400-73275419 None:intergenic 35.0%
!! CATGATTGGTGTTAACTACA+AGG - chr7.1:73274004-73274023 MS.gene044964:CDS 35.0%
!! TTGCTTTTACTGATAGTGAG+AGG - chr7.1:73273182-73273201 MS.gene044964:CDS 35.0%
!!! GGTTCAAGATTTGTTGCTTT+TGG - chr7.1:73274868-73274887 MS.gene044964:intron 35.0%
!!! TTTTGAGTTGGATCGGAATA+TGG - chr7.1:73273634-73273653 MS.gene044964:CDS 35.0%
AACCAGAGACAACAACTTGT+TGG - chr7.1:73275054-73275073 MS.gene044964:intron 40.0%
ACTTACTCAGACAATCAACC+TGG - chr7.1:73274995-73275014 MS.gene044964:intron 40.0%
AGAGACATTCAAGATACCGT+TGG + chr7.1:73275155-73275174 None:intergenic 40.0%
ATTACCATCACCAACGACAA+AGG - chr7.1:73275208-73275227 MS.gene044964:intron 40.0%
CAAAATCTTCACCACCAAGA+TGG + chr7.1:73274388-73274407 None:intergenic 40.0%
CAATTGAGTGGGATAAGGTT+TGG - chr7.1:73273691-73273710 MS.gene044964:CDS 40.0%
CACAACAATTCCAACCAAGA+AGG - chr7.1:73274958-73274977 MS.gene044964:intron 40.0%
CATGATGTTGTTCTTGTTGG+TGG - chr7.1:73274701-73274720 MS.gene044964:CDS 40.0%
CTCTCTCACCTTCATAAACT+TGG + chr7.1:73275030-73275049 None:intergenic 40.0%
GAAATACAAGGCAGAAGATG+AGG - chr7.1:73275276-73275295 MS.gene044964:intron 40.0%
GAGATTGCTGAAGCTTATCT+CGG - chr7.1:73274086-73274105 MS.gene044964:CDS 40.0%
GATGTCACTCCATTGTCTTT+GGG - chr7.1:73274890-73274909 MS.gene044964:intron 40.0%
GTGTTTGAGAGATGCTAAGA+TGG - chr7.1:73274664-73274683 MS.gene044964:CDS 40.0%
GTTGGAATTGTTGTGTTCCT+TGG + chr7.1:73274953-73274972 None:intergenic 40.0%
TAAACTTGGATCAAGACACC+AGG + chr7.1:73275016-73275035 None:intergenic 40.0%
TAAGTTCCTCAAATCTGGCA+CGG + chr7.1:73274604-73274623 None:intergenic 40.0%
TCTCTCAAACACTTCTCTAC+AGG + chr7.1:73274656-73274675 None:intergenic 40.0%
TCTGCTGAAGACAAAACAAC+TGG - chr7.1:73275172-73275191 MS.gene044964:intron 40.0%
TGAGGAAGCAGAGAAATACA+AGG - chr7.1:73275264-73275283 MS.gene044964:intron 40.0%
TGCAACAGTTGCTGAACTTT+GGG + chr7.1:73274740-73274759 None:intergenic 40.0%
TGCATACGGTCTTGACAAAA+AGG - chr7.1:73274244-73274263 MS.gene044964:CDS 40.0%
TGTTTCGACATTGATGCCAA+CGG - chr7.1:73275136-73275155 MS.gene044964:intron 40.0%
TTCAGAGTGACATGAAGCTA+TGG - chr7.1:73273946-73273965 MS.gene044964:CDS 40.0%
TTGCAACAGTTGCTGAACTT+TGG + chr7.1:73274741-73274760 None:intergenic 40.0%
TTGGGAAAATTCGAGCTTTC+CGG - chr7.1:73275073-73275092 MS.gene044964:intron 40.0%
! AAAACTTGCTCCTTCTTGGT+TGG + chr7.1:73274971-73274990 None:intergenic 40.0%
! ACCAGAGACAACAACTTGTT+GGG - chr7.1:73275055-73275074 MS.gene044964:intron 40.0%
! ACTGATAGTGAGAGGTTGAT+CGG - chr7.1:73273190-73273209 MS.gene044964:CDS 40.0%
! AGAGAAAACTTGCTCCTTCT+TGG + chr7.1:73274975-73274994 None:intergenic 40.0%
! GGTTGATGCAAAGAATGCTT+TGG - chr7.1:73275312-73275331 MS.gene044964:intron 40.0%
! GTTTCTAGACCCAAAGACAA+TGG + chr7.1:73274902-73274921 None:intergenic 40.0%
! TAGCAATGATTGGGTTGCAA+AGG + chr7.1:73275513-73275532 None:intergenic 40.0%
!! GTGTTGATCTTTGATTTGGG+AGG - chr7.1:73274290-73274309 MS.gene044964:CDS 40.0%
!! TTCTTGTTGGTGGTTCAACT+AGG - chr7.1:73274711-73274730 MS.gene044964:CDS 40.0%
!! TTGATCTTTGATTTGGGAGG+TGG - chr7.1:73274293-73274312 MS.gene044964:CDS 40.0%
AAAGGTGAAGGTCCTGCAAT+CGG - chr7.1:73273058-73273077 MS.gene044964:CDS 45.0%
AAGTTCCTCAAATCTGGCAC+GGG + chr7.1:73274603-73274622 None:intergenic 45.0%
ACTGCTGCAGCTATTGCATA+CGG - chr7.1:73274230-73274249 MS.gene044964:CDS 45.0%
AGACAACCTTCCTTTGTCGT+TGG + chr7.1:73275221-73275240 None:intergenic 45.0%
AGGATATTAGCGGAAACCCT+AGG - chr7.1:73274459-73274478 MS.gene044964:CDS 45.0%
ATCCTTTGTGGCTTGACGTT+GGG + chr7.1:73274162-73274181 None:intergenic 45.0%
ATGCGGTTCTCAATCTCCTA+AGG + chr7.1:73274487-73274506 None:intergenic 45.0%
ATTGAGTCCTGCAATGACAC+CGG + chr7.1:73274186-73274205 None:intergenic 45.0%
CAAAATCGCTGCTTGTACAG+CGG + chr7.1:73274828-73274847 None:intergenic 45.0%
CAATTGACGCTGCAATTCAG+TGG - chr7.1:73275425-73275444 MS.gene044964:CDS 45.0%
CATACTCGTGTGTTGGAGTA+TGG - chr7.1:73273098-73273117 MS.gene044964:CDS 45.0%
CATGAAGCTATGGCCTTTCA+AGG - chr7.1:73273956-73273975 MS.gene044964:CDS 45.0%
CCTGCAATCGGAATAGATCT+GGG - chr7.1:73273070-73273089 MS.gene044964:CDS 45.0%
CGACAAAGGAAGGTTGTCTA+AGG - chr7.1:73275222-73275241 MS.gene044964:intron 45.0%
CGTTCGGTTTCCTTGATCAT+TGG + chr7.1:73273149-73273168 None:intergenic 45.0%
CTGTGATTTGAGGAACACCA+CGG + chr7.1:73275114-73275133 None:intergenic 45.0%
CTTATCCCACTCAATTGCGT+CGG + chr7.1:73273688-73273707 None:intergenic 45.0%
GACAAAAAGGCGACAAGTGT+TGG - chr7.1:73274257-73274276 MS.gene044964:CDS 45.0%
GAGATCATCGCCAATGATCA+AGG - chr7.1:73273136-73273155 MS.gene044964:CDS 45.0%
GAGTGGTGAAGGCAATGAAA+AGG - chr7.1:73274847-73274866 MS.gene044964:intron 45.0%
GCAACAGTTGCTGAACTTTG+GGG + chr7.1:73274739-73274758 None:intergenic 45.0%
GCTAAGATGTATCAAGGTGG+AGG - chr7.1:73275529-73275548 MS.gene044964:CDS 45.0%
GGAACAACATACTCGTGTGT+TGG - chr7.1:73273091-73273110 MS.gene044964:CDS 45.0%
GGATATTAGCGGAAACCCTA+GGG - chr7.1:73274460-73274479 MS.gene044964:CDS 45.0%
GGATGTCACTCCATTGTCTT+TGG - chr7.1:73274889-73274908 MS.gene044964:intron 45.0%
TATGCAATAGCTGCAGCAGT+TGG + chr7.1:73274230-73274249 None:intergenic 45.0%
TCCCAACAAGTTGTTGTCTC+TGG + chr7.1:73275059-73275078 None:intergenic 45.0%
TCCTGCAATCGGAATAGATC+TGG - chr7.1:73273069-73273088 MS.gene044964:CDS 45.0%
TCTTTGGGTCTAGAAACTGC+TGG - chr7.1:73274905-73274924 MS.gene044964:intron 45.0%
TGCGGTTCTCAATCTCCTAA+GGG + chr7.1:73274486-73274505 None:intergenic 45.0%
TGGATCAAAGCTTTCACCAG+AGG - chr7.1:73275381-73275400 MS.gene044964:intron 45.0%
TGGGAATCGTTGAAGTAAGC+TGG + chr7.1:73274143-73274162 None:intergenic 45.0%
TGTGATTTGAGGAACACCAC+GGG + chr7.1:73275113-73275132 None:intergenic 45.0%
! GTACAAGCAGCGATTTTGAG+TGG - chr7.1:73274830-73274849 MS.gene044964:intron 45.0%
! TTTGAAGTTAAGGCCACTGC+TGG - chr7.1:73274356-73274375 MS.gene044964:CDS 45.0%
AAATCTGGCACGGGTGATTG+TGG + chr7.1:73274594-73274613 None:intergenic 50.0%
AAGATGGGTATCACCAGCAG+TGG + chr7.1:73274372-73274391 None:intergenic 50.0%
AATCACCCGTGCCAGATTTG+AGG - chr7.1:73274595-73274614 MS.gene044964:CDS 50.0%
AATGACACCGGCATCCTTTG+TGG + chr7.1:73274174-73274193 None:intergenic 50.0%
ACTGCTGGTGATACCCATCT+TGG - chr7.1:73274371-73274390 MS.gene044964:CDS 50.0%
ATGTAGCCGACGCAATTGAG+TGG - chr7.1:73273679-73273698 MS.gene044964:CDS 50.0%
CAACATAAGACGGCGTCGTT+CGG + chr7.1:73273165-73273184 None:intergenic 50.0%
CATAAGCAACAGCCTCGTCT+GGG + chr7.1:73274802-73274821 None:intergenic 50.0%
CATCCTTTGTGGCTTGACGT+TGG + chr7.1:73274163-73274182 None:intergenic 50.0%
CCATCACCAACGACAAAGGA+AGG - chr7.1:73275212-73275231 MS.gene044964:intron 50.0%
CCCAGATCTATTCCGATTGC+AGG + chr7.1:73273073-73273092 None:intergenic 50.0%
CCTGGTGAAAAGCCCATGAT+TGG - chr7.1:73273990-73274009 MS.gene044964:CDS 50.0%
CGACGCAATTGAGTGGGATA+AGG - chr7.1:73273686-73273705 MS.gene044964:CDS 50.0%
CGGTGATGCTGCTAAGAATC+AGG - chr7.1:73273210-73273229 MS.gene044964:CDS 50.0%
GGACCAGCAGTAACCTTGAA+AGG + chr7.1:73273972-73273991 None:intergenic 50.0%
GTGATTTGAGGAACACCACG+GGG + chr7.1:73275112-73275131 None:intergenic 50.0%
GTGGTTGGACAGTAACCAGT+TGG - chr7.1:73275444-73275463 MS.gene044964:CDS 50.0%
TCAATCTCCTAAGGGCCCTA+GGG + chr7.1:73274478-73274497 None:intergenic 50.0%
TCCATACCACCAGCCATATC+AGG + chr7.1:73275559-73275578 None:intergenic 50.0%
TCCTGATATGGCTGGTGGTA+TGG - chr7.1:73275555-73275574 MS.gene044964:CDS 50.0%
TCTCTTCGCTCTCTCACATG+CGG + chr7.1:73274504-73274523 None:intergenic 50.0%
TGACGCTGCAATTCAGTGGT+TGG - chr7.1:73275429-73275448 MS.gene044964:CDS 50.0%
TGGCCTTTCAAGGTTACTGC+TGG - chr7.1:73273966-73273985 MS.gene044964:CDS 50.0%
TGTAGCCGACGCAATTGAGT+GGG - chr7.1:73273680-73273699 MS.gene044964:CDS 50.0%
TTCAAGGTTACTGCTGGTCC+TGG - chr7.1:73273972-73273991 MS.gene044964:CDS 50.0%
TTCCCAACGTCAAGCCACAA+AGG - chr7.1:73274157-73274176 MS.gene044964:CDS 50.0%
TTGGGTCTAGAAACTGCTGG+TGG - chr7.1:73274908-73274927 MS.gene044964:intron 50.0%
! CCAATCATGGGCTTTTCACC+AGG + chr7.1:73273993-73274012 None:intergenic 50.0%
! CCTTCCTTTGTCGTTGGTGA+TGG + chr7.1:73275215-73275234 None:intergenic 50.0%
! TGCAGGACCTTCACCTTTTC+CGG + chr7.1:73273056-73273075 None:intergenic 50.0%
! TGGTGTTAACTACAAGGGCG+AGG - chr7.1:73274010-73274029 MS.gene044964:CDS 50.0%
!! CAAGAGTATCAACCCAGACG+AGG - chr7.1:73274787-73274806 MS.gene044964:intron 50.0%
!! GCAGCGATTTTGAGTGGTGA+AGG - chr7.1:73274836-73274855 MS.gene044964:intron 50.0%
ACTCATCAGCCTCTGCCAAC+TGG + chr7.1:73275462-73275481 None:intergenic 55.0%
CCATAAGCAACAGCCTCGTC+TGG + chr7.1:73274803-73274822 None:intergenic 55.0%
CGTCAAGCCACAAAGGATGC+CGG - chr7.1:73274164-73274183 MS.gene044964:CDS 55.0%
CTCAATCTCCTAAGGGCCCT+AGG + chr7.1:73274479-73274498 None:intergenic 55.0%
GATGAAGTTCCTCCAGCAGC+AGG - chr7.1:73275580-73275599 MS.gene044964:CDS 55.0%
GCTGGTGATACCCATCTTGG+TGG - chr7.1:73274374-73274393 MS.gene044964:CDS 55.0%
GGACAGTAACCAGTTGGCAG+AGG - chr7.1:73275450-73275469 MS.gene044964:CDS 55.0%
! CCAGACGAGGCTGTTGCTTA+TGG - chr7.1:73274800-73274819 MS.gene044964:intron 55.0%
!! AAGGATGCCGGTGTCATTGC+AGG - chr7.1:73274176-73274195 MS.gene044964:CDS 55.0%
!! AGGTGGAGGTGCTCCTGATA+TGG - chr7.1:73275543-73275562 MS.gene044964:CDS 55.0%
GAAGTTCCTCCAGCAGCAGG+TGG - chr7.1:73275583-73275602 MS.gene044964:CDS 60.0%
GGTGCTCCTGATATGGCTGG+TGG - chr7.1:73275550-73275569 MS.gene044964:CDS 60.0%
!! GGAGGTGCTCCTGATATGGC+TGG - chr7.1:73275547-73275566 MS.gene044964:CDS 60.0%
ACGGGGAGCTGGAGGAATGC+CGG + chr7.1:73275095-73275114 None:intergenic 65.0%
GCGGAAACCCTAGGGCCCTT+AGG - chr7.1:73274468-73274487 MS.gene044964:CDS 65.0%
TGAGGAACACCACGGGGAGC+TGG + chr7.1:73275106-73275125 None:intergenic 65.0%
CCAGCACCACCTGCTGCTGG+AGG + chr7.1:73275592-73275611 None:intergenic 70.0%
CCTCCAGCAGCAGGTGGTGC+TGG - chr7.1:73275589-73275608 MS.gene044964:CDS 70.0%
GGAACACCACGGGGAGCTGG+AGG + chr7.1:73275103-73275122 None:intergenic 70.0%
GGACCAGCACCACCTGCTGC+TGG + chr7.1:73275595-73275614 None:intergenic 70.0%
GGCATTCCTCCAGCTCCCCG+TGG - chr7.1:73275094-73275113 MS.gene044964:intron 70.0%


Chromosome Type Strat End Strand Name
chr7.1 gene 73273049 73275636 73273049 ID=MS.gene044964
chr7.1 mRNA 73273049 73275636 73273049 ID=MS.gene044964.t1;Parent=MS.gene044964
chr7.1 exon 73275423 73275636 73275423 ID=MS.gene044964.t1.exon1;Parent=MS.gene044964.t1
chr7.1 CDS 73275423 73275636 73275423 ID=cds.MS.gene044964.t1;Parent=MS.gene044964.t1
chr7.1 exon 73273049 73274781 73273049 ID=MS.gene044964.t1.exon2;Parent=MS.gene044964.t1
chr7.1 CDS 73273049 73274781 73273049 ID=cds.MS.gene044964.t1;Parent=MS.gene044964.t1
Gene Sequence

>MS.gene044964

ATGGCCGGAAAAGGTGAAGGTCCTGCAATCGGAATAGATCTGGGAACAACATACTCGTGTGTTGGAGTATGGCAACACGATCGTGTTGAGATCATCGCCAATGATCAAGGAAACCGAACGACGCCGTCTTATGTTGCTTTTACTGATAGTGAGAGGTTGATCGGTGATGCTGCTAAGAATCAGGTTGCGATGAACCCTGTTAACACTGTTTTCGGTAAGATTTCGATTCTCAACATTCGCATTATTGTGATTTCATTGTTATATGTACTACATTGTTGTTGAATTGAGATATATGTACATTGTAGTTTTTTTATTGTTGAAAATAAATAATTAATCTGGGGTCTTATCCGGTTAATTTTCAATTATTTGTTTATTGTGATTTGAAGCTTGTGATTTCTTTAATATATATTGAACAATTGATTATGAGATATGAACATTATAATTTTTGTTGATAGAATGAACATTATAATATCATTATATGCTGTTATATTCACCTTTATTCATGTTGATTAACGAGGGTTAGAATAATTTGATCCCTTACATTGAATGGTGAGTTTGTATTCATTTACTGAGTGTAATTTGTTTTTTTGAGTTGGATCGGAATATGGTTTATAATGATAGAACTTGATCATGTAGCCGACGCAATTGAGTGGGATAAGGTTTGGTTGTTGTTGATGATGAATGAATCTATGCCTTAATTAAATAGTATCATGCAAAAGATTGGTTTAATATGACGTACTGACATATGATAATTGATAAGCTTGATTGTTATTTTTTGACGTATTGAATTTTAATTATTGGTTTATTTTGAAGTTTGATTGCTTATTGGTTATTTGAATGTGTATGATCAAACAGATGCTAAACGTTTGATTGGAAGGAGAGTTTCTGATGCATCTGTTCAGAGTGACATGAAGCTATGGCCTTTCAAGGTTACTGCTGGTCCTGGTGAAAAGCCCATGATTGGTGTTAACTACAAGGGCGAGGACAAGCAATTTGCTGCTGAAGAAATTTCATCTATGGTGCTCATGAAGATGCGCGAGATTGCTGAAGCTTATCTCGGTTCAGCAGTGAAGAATGCTGTTGTCACAGTTCCAGCTTACTTCAACGATTCCCAACGTCAAGCCACAAAGGATGCCGGTGTCATTGCAGGACTCAATGTCATGAGAATTATCAATGAGCCAACTGCTGCAGCTATTGCATACGGTCTTGACAAAAAGGCGACAAGTGTTGGTGAGAAGAATGTGTTGATCTTTGATTTGGGAGGTGGTACTTTTGATGTGTCACTTCTTACTATTGAAGAGGGTATTTTTGAAGTTAAGGCCACTGCTGGTGATACCCATCTTGGTGGTGAAGATTTTGATAACAGAATGGTTAACCATTTTGTTCAAGAGTTTAAGAGGAAGAACAAGAAGGATATTAGCGGAAACCCTAGGGCCCTTAGGAGATTGAGAACCGCATGTGAGAGAGCGAAGAGAACTCTCTCATCTACTGCACAAACTACCATTGAGATTGATTCTTTGTTTGAGGGTGTTGATTTTTACACCACAATCACCCGTGCCAGATTTGAGGAACTTAACATGGATTTGTTCAGAAAGTGTATGGAGCCTGTAGAGAAGTGTTTGAGAGATGCTAAGATGGACAAGAACTCTGTTCATGATGTTGTTCTTGTTGGTGGTTCAACTAGGATCCCCAAAGTTCAGCAACTGTTGCAAGATTTCTTCAATGGTAAGGAGCTTTGCAAGAGTATCAACCCAGACGAGGCTGTTGCTTATGGTGCCGCTGTACAAGCAGCGATTTTGAGTGGTGAAGGCAATGAAAAGGTTCAAGATTTGTTGCTTTTGGATGTCACTCCATTGTCTTTGGGTCTAGAAACTGCTGGTGGTGTTATGACAGTTCTCATTCCAAGGAACACAACAATTCCAACCAAGAAGGAGCAAGTTTTCTCTACTTACTCAGACAATCAACCTGGTGTCTTGATCCAAGTTTATGAAGGTGAGAGAGCAAGAACCAGAGACAACAACTTGTTGGGAAAATTCGAGCTTTCCGGCATTCCTCCAGCTCCCCGTGGTGTTCCTCAAATCACAGTTTGTTTCGACATTGATGCCAACGGTATCTTGAATGTCTCTGCTGAAGACAAAACAACTGGACAGAAGAACAAGATTACCATCACCAACGACAAAGGAAGGTTGTCTAAGGAAGAAATTGAGAAGATGGTTGAGGAAGCAGAGAAATACAAGGCAGAAGATGAGGAACACAAAAAGAAGGTTGATGCAAAGAATGCTTTGGAAAACTATGCATACAACATGAGGAACACAATTAAAGATGAGAAGATTGGATCAAAGCTTTCACCAGAGGACAAAAAGAAGATTGATGATGCAATTGACGCTGCAATTCAGTGGTTGGACAGTAACCAGTTGGCAGAGGCTGATGAGTTTGAAGATAAGATGAAGGAACTTGAGAGCCTTTGCAACCCAATCATTGCTAAGATGTATCAAGGTGGAGGTGCTCCTGATATGGCTGGTGGTATGGATGATGAAGTTCCTCCAGCAGCAGGTGGTGCTGGTCCTAAGATTGAAGAAGTCGATTAA

Protein sequence

>MS.gene044964.t1

MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNPVNTVFDAKRLIGRRVSDASVQSDMKLWPFKVTAGPGEKPMIGVNYKGEDKQFAAEEISSMVLMKMREIAEAYLGSAVKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLFEGVDFYTTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKNSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERARTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVEEAEKYKAEDEEHKKKVDAKNALENYAYNMRNTIKDEKIGSKLSPEDKKKIDDAIDAAIQWLDSNQLAEADEFEDKMKELESLCNPIIAKMYQGGGAPDMAGGMDDEVPPAAGGAGPKIEEVD